prot_P-littoralis_Contig617.18.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig617.18.2
Unique Nameprot_P-littoralis_Contig617.18.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length223
Homology
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BLAST of mRNA_P-littoralis_Contig617.18.2 vs. uniprot
Match: D7FS48_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS48_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 2.780e-8
Identity = 30/41 (73.17%), Postives = 33/41 (80.49%), Query Frame = 0 
Query:    3 GDRGGG----VTWTASELAVLRQSIRENGLDNW-TLGDWSE 38
            G RGGG    V WTA+EL VLRQSIRENGLD+W TLGDWS+
Sbjct:    6 GGRGGGGPGAVAWTAAELEVLRQSIRENGLDDWRTLGDWSQ 46
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig617.18.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FS48_ECTSI2.780e-873.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig617contigP-littoralis_Contig617:18782..65552 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig617.18.2mRNA_P-littoralis_Contig617.18.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig617 18572..65552 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig617.18.2 ID=prot_P-littoralis_Contig617.18.2|Name=mRNA_P-littoralis_Contig617.18.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=223bp
MSGDRGGGVTWTASELAVLRQSIRENGLDNWTLGDWSELEPVAVAALPTF
RTCTSSICRTSSSSSSSNNNNRGTRHATTTTTMTTTTAATTTTSTTTTPM
KLLPQPQPQQPPRAAAGPHRRASIAMPPGGLHTTKMEAAAPQAPPPPRKA
GRQGKESSPLLPAAPPAGTSTCTKTTRAGTGYTGGDLTLGSRTCNRACRG
GNRRALALVVTGMVEVPVVGSGV
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