prot_P-littoralis_Contig616.37.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig616.37.1
Unique Nameprot_P-littoralis_Contig616.37.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length52
Homology
BLAST of mRNA_P-littoralis_Contig616.37.1 vs. uniprot
Match: A0A6H5L610_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L610_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 3.980e-20
Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 0
Query:    1 DIKHHSIRERVARGELRVVHVRSALQRADFLAKALPKDAFCAHRDFVMSIR 51
            DI+HH IRERVARGE +VVHVRS LQRADFL K LPK+ FCAHRDFVM+IR
Sbjct:   81 DIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 131          
BLAST of mRNA_P-littoralis_Contig616.37.1 vs. uniprot
Match: A0A6H5KZC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZC8_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 1.230e-19
Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 0
Query:    1 DIKHHSIRERVARGELRVVHVRSALQRADFLAKALPKDAFCAHRDFVMSIR 51
            DI+HH IRERVARGE +VVHVRS LQRADFL K LPK+ FCAHRDFVM+IR
Sbjct:  127 DIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 177          
BLAST of mRNA_P-littoralis_Contig616.37.1 vs. uniprot
Match: A0A6H5KHN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHN8_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 2.790e-18
Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 0
Query:    1 DIKHHSIRERVARGELRVVHVRSALQRADFLAKALPKDAFCAHRDFVMSIR 51
            DI+HH IRERVARGE +VVHVRS LQRADFL K LPK+ FCAHRDFVM+IR
Sbjct:  365 DIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 415          
BLAST of mRNA_P-littoralis_Contig616.37.1 vs. uniprot
Match: A0A6H5K5L3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5L3_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 3.630e-18
Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 0
Query:    1 DIKHHSIRERVARGELRVVHVRSALQRADFLAKALPKDAFCAHRDFVMSIR 51
            DI+HH IRERVARGE +VVHVRS LQRADFL K LPK+ FCAHRDFVM+IR
Sbjct:  513 DIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 563          
BLAST of mRNA_P-littoralis_Contig616.37.1 vs. uniprot
Match: A0A6H5JWG1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWG1_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 3.650e-18
Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 0
Query:    1 DIKHHSIRERVARGELRVVHVRSALQRADFLAKALPKDAFCAHRDFVMSIR 51
            DI+HH IRERVARGE +VVHVRS LQRADFL K LPK+ FCAHRDFVM+IR
Sbjct:  526 DIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 576          
BLAST of mRNA_P-littoralis_Contig616.37.1 vs. uniprot
Match: A0A6H5KGK7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGK7_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 3.670e-18
Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 0
Query:    1 DIKHHSIRERVARGELRVVHVRSALQRADFLAKALPKDAFCAHRDFVMSIR 51
            DI+HH IRERVARGE +VVHVRS LQRADFL K LPK+ FCAHRDFVM+IR
Sbjct:  750 DIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 800          
BLAST of mRNA_P-littoralis_Contig616.37.1 vs. uniprot
Match: A0A6H5KAC2_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAC2_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 3.680e-18
Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 0
Query:    1 DIKHHSIRERVARGELRVVHVRSALQRADFLAKALPKDAFCAHRDFVMSIR 51
            DI+HH IRERVARGE +VVHVRS LQRADFL K LPK+ FCAHRDFVM+IR
Sbjct: 1826 DIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 1876          
BLAST of mRNA_P-littoralis_Contig616.37.1 vs. uniprot
Match: A0A6H5K862_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K862_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 3.680e-18
Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 0
Query:    1 DIKHHSIRERVARGELRVVHVRSALQRADFLAKALPKDAFCAHRDFVMSIR 51
            DI+HH IRERVARGE +VVHVRS LQRADFL K LPK+ FCAHRDFVM+IR
Sbjct: 2243 DIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 2293          
BLAST of mRNA_P-littoralis_Contig616.37.1 vs. uniprot
Match: A0A6H5JN01_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN01_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 2.380e-17
Identity = 40/51 (78.43%), Postives = 45/51 (88.24%), Query Frame = 0
Query:    1 DIKHHSIRERVARGELRVVHVRSALQRADFLAKALPKDAFCAHRDFVMSIR 51
            DI+H  IRERVARGE R+VHVRS LQRADFL KAL K+AFCAHRDFVM++R
Sbjct:  794 DIRHQCIRERVARGEFRIVHVRSDLQRADFLTKALSKEAFCAHRDFVMNLR 844          
BLAST of mRNA_P-littoralis_Contig616.37.1 vs. uniprot
Match: A0A6H5L3I3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3I3_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 2.990e-17
Identity = 39/51 (76.47%), Postives = 44/51 (86.27%), Query Frame = 0
Query:    1 DIKHHSIRERVARGELRVVHVRSALQRADFLAKALPKDAFCAHRDFVMSIR 51
            DI+HH IRER+ARGE +VVHVRS LQRADFL K LPK+ FCA RDFVM+IR
Sbjct:  222 DIRHHFIRERLARGEFKVVHVRSDLQRADFLTKPLPKETFCAQRDFVMNIR 272          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig616.37.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L610_9PHAE3.980e-2080.39Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZC8_9PHAE1.230e-1980.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHN8_9PHAE2.790e-1880.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5L3_9PHAE3.630e-1880.39Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JWG1_9PHAE3.650e-1880.39Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KGK7_9PHAE3.670e-1880.39Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KAC2_9PHAE3.680e-1880.39Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5K862_9PHAE3.680e-1880.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN01_9PHAE2.380e-1778.43Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L3I3_9PHAE2.990e-1776.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig616contigP-littoralis_Contig616:174190..174345 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig616.37.1mRNA_P-littoralis_Contig616.37.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig616 174141..174345 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig616.37.1 ID=prot_P-littoralis_Contig616.37.1|Name=mRNA_P-littoralis_Contig616.37.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=52bp
DIKHHSIRERVARGELRVVHVRSALQRADFLAKALPKDAFCAHRDFVMSI
R*
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