prot_P-littoralis_Contig616.26.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig616.26.3
Unique Nameprot_P-littoralis_Contig616.26.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length798
Homology
BLAST of mRNA_P-littoralis_Contig616.26.3 vs. uniprot
Match: A0A6H5L8A2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8A2_9PHAE)

HSP 1 Score: 419 bits (1078), Expect = 2.800e-131
Identity = 374/835 (44.79%), Postives = 442/835 (52.93%), Query Frame = 0
Query:    5 RSTAFVSFDAQQRRSEGINGALTPARPHRTPQQQQQLQQRRHTNSKTLNDIYAATLDKMTTTAPAGQQQGRGRGGGALFGHEPGKLASGEG------------------------ISLQETETRIVELERSEFDLKLRLFYMGEQLELASGGADVLQLHKETMDAKLQRAQAEEAVRTAREALSEVEVKCGELQTQVRDVKAQRTKDRENWATIQGQDEARLQKHTRLIEDALKTERAENARLRLAADANSRRGSWD----GGGQQSXXXXRRKSTGDGA-CGQVGGH--GGTSTGGFGREDRLQQQQQLTAKVRSQDSSLRSLRADVTTLRRRLRTQAETLARQKEETVVVRQAAEQVACVEAEEIARLAVDLERAVQAAHAEAEARRHAEERLAAAETRLWQRKTGGHAQRPASP--ARSPRGGAGCKILCRGDVDGGREXXXXXXXXXXXXXDVFQAPSERNSERESSPLPTPRGALGSTIASRARVVSGGPANRRKEFSTCSKGEGRSSSSPQGGRGAEVVEQRRPWGSSPPPSXXXXXXXXXXXXXXXXR-----RRPLADAGAASAEQQESPRRHPKDRLPGERRDESSAASRCDHGWRGDVTDKTQLPGTTTXXXXXXXVNRYDRGSRHSHVGEREADTAGERGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLATSSVAEAVAAAMSGVDLTETIARVLRAAVATAPVSSSSPGSADVNDRSSGQDTRANDSRE---QRRGETRLGCYEGRDLLSYMRQGDRNKSAWGSGKPAATVGAPS--VDGGRFLKSREVAELESDVQHIFRFFAAKDGRR 796
            RSTAF SFD Q R  EGING+LTPARP R              N+K+ + I     D     A    +QG  RG   L  H  G++ +GEG                        I+LQ TE +I ELER EFDLKL+LFYM EQLELA+GG DVLQLHKE M+AKL RAQAEE  R A +ALS +E KC ELQ QVRDV+AQR KDRENWA+++G+ E +L+KHT L+EDAL+ ERAEN RLR A D  +RR SWD     G QQ     RR+S+G+     QVG    G  S GG  RE   +  +QL AKVRSQDSSLRSLRADV+TLRRRLRTQAETL +Q+EE   VR+AAEQVACVEAEEIARLAVDLERAV+AA+AEAE RRHAE+ L AAETRL     G        P  ARSPR  AG ++      +  R                  +P   + +   S LP  RGALGSTIASR R  +   A RRK+                         +RRPWGSSPPPS                      RRP    G   AEQ+ +P R    R PGE      AA R   G RG+ T+   +   TT        N  D       VG READ+AGE                                              + +A  +AAA+ GVDL  TIAR LRAAVAT P S+ S  + +  D   GQ T A  S      R+ E  LG  +  DLL+ + +G   K AW +  P    G  S   +GGR LKSREVAELESDVQHIF+FFAAKDGR+
Sbjct:    4 RSTAFSSFDVQPRSGEGINGSLTPARPPRQ-------------NTKSTHGIPIYPYDASNENASRHARQGD-RGSAGLSAHV-GEVVAGEGMPSGLRQGSRSSDPLTGCAAGKGGINLQATEAKIDELERGEFDLKLKLFYMEEQLELAAGGTDVLQLHKEVMEAKLHRAQAEERARAAGDALSGLEAKCRELQAQVRDVEAQRAKDRENWASLEGESETKLRKHTHLLEDALRAERAENQRLRAARD--NRRRSWDVPGGSGEQQPRASPRRRSSGEYEHVDQVGPRRVGNGSWGGLAREHH-EHDRQLAAKVRSQDSSLRSLRADVSTLRRRLRTQAETLVKQREENTTVRRAAEQVACVEAEEIARLAVDLERAVRAANAEAEKRRHAEKCLQAAETRLLDATAGCSPLVLPRPERARSPRASAG-RVEAPARREAARVCRKPFGPPAVEGCTPPGSPKGGSEKASGSSLPPSRGALGSTIASRGRSAA---AARRKD-EXXXXXXXXXXXXXXXXXXXXXXXKRRPWGSSPPPSPPRGGSFLGKPAIGSKLNPSRLRRP----GDNEAEQKRTPPR----RRPGEL---IGAAKREAAGSRGNGTESRGVQTGTTQ-------NPSD-----FSVGPREADSAGES--------RRGVFTTVEWRGSTAPRVDKTAKPRIEAASAGRDQGITPMAGGIAAAIRGVDLKATIARELRAAVATTPASAVSSENFNGGD-GGGQRTPAGGSAPAGGDRQREKALGELDEGDLLNEISRGS-GKCAWAALIPDTVAGGLSSAANGGRALKSREVAELESDVQHIFQFFAAKDGRK 782          
BLAST of mRNA_P-littoralis_Contig616.26.3 vs. uniprot
Match: D7FSW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSW7_ECTSI)

HSP 1 Score: 389 bits (999), Expect = 3.530e-120
Identity = 341/743 (45.90%), Postives = 400/743 (53.84%), Query Frame = 0
Query:   88 GKLASGEGISLQETETRIVELERSEFDLKLRLFYMGEQLELASGGADVLQLHKETMDAKLQ-----------RAQAEEAVRTAREALSEVEVKCGELQTQVRDVKAQRTKDRENWATIQGQDEARLQKHTRLIEDALKTERAENARLRLAADANSRRGSWD----GGGQQSXXXXRRKSTGDGA-CGQVGGH--GGTSTGGFGREDRLQQQQQLTAKVRSQDSSLRSLRADVTTLRRRLRTQAETLARQKEETVVVRQAAEQVACVEAEEIARLAVDLERAVQAAHAEAEARRHAEERLAAAETRLWQRKTGGHAQRPASP--ARSPRGGAGCKILCRGDVDGGREXXXXXXXXXXXXXDVFQAPSERNSERESSPLPTPRGALGSTIASRARVVSGGPANRRKEFSTCSKGEGRSSSSPQGGRGAEVVEQRRPWGSSPPPSXXXXXXXXXXXXXXXXR-----RRPLADAGAASAEQQESPRRHPKDRLPGERRDESSAASRCDHGWRGDVTDKTQLPGTTTXXXXXXXVNRYDRGSRHSHVGEREADTAGE--RGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLATSSVAEAVAAAMSGVDLTETIARVLRAAVATAP---VSSSSPGSADVNDRSSGQDTRANDSREQRRGETRLGCYEGRDLLSYMRQGDRNKSAWGSGKPAATVGAPS--VDGGRFLKSREVAELESDVQHIFRFFAAKDGRRLS 798
            G  A+  GI+LQ TE +I ELER EFDLKL+LFYM EQLELA+GG DVLQLHKE M+AKL            RAQAEE  + A +ALS +E KC ELQ QVRDV+AQR KDRENWA + G+ E +L+KHT L+EDAL+TERAEN RLR+A D  +RR SWD     G QQ     RR+S+G+     QVG    G  S GG  RE   +Q +QL AKVRSQDSSLRSLRADV+TLRRRLRTQAETLA+Q+EE   VR+AAEQVACVEAEEIARLAVDLERAV+AA+AEAE RRHAE+RL AAETRL     G        P  ARSPR  AG ++      +  R                  +P+        S LP  RGALGSTIASR R  +   A RRKE  + +         P+G R  E   +RRPWGSSPPPS                      RRP    G   AEQ++ P R     + G  + ES+ +       RG  T  TQ P   +                   VG READ+AGE  RGG                                        L  +     +AAA+ GVDL  TIAR LRAAVAT P   VSS +                       R+ E  LG  +G DLL  + +G   K AW    P    G  S   + GR LKSREVAELESDVQHIF+FFAAKDGR+ S
Sbjct:   37 GCAAANGGINLQATEAKIDELERGEFDLKLKLFYMEEQLELAAGGTDVLQLHKEVMEAKLSFVVTATAPARHRAQAEERAQAAGDALSGLEAKCRELQAQVRDVEAQRAKDRENWAMLDGESETKLKKHTHLLEDALRTERAENQRLRVARD--NRRRSWDVPGGSGEQQPRAPPRRRSSGEYEHVHQVGPRRVGSGSWGGLAREHH-EQDRQLAAKVRSQDSSLRSLRADVSTLRRRLRTQAETLAKQREENTTVRRAAEQVACVEAEEIARLAVDLERAVRAANAEAEKRRHAEKRLQAAETRLLDATAGCSPLVLPRPERARSPRASAG-RVEAPALREAARVCRKPFGPAAAEGCTPPGSPNGDGERASGSSLPPSRGALGSTIASRGRSAA---AARRKEEGSSAGXXXXXXXXPRG-RDTETKGKRRPWGSSPPPSPPRGGSLLGKPTVASKLNPSRLRRP----GENEAEQKQPPPRRRPGEVIGAVKRESTGSPGNGTESRGVQTGTTQDPSDCS-------------------VGPREADSAGESRRGG----------FTTVGRGGSTAPHVDETAEPRIEAASAGRDLGITPTVGGIAAAIRGVDLKATIARELRAAVATTPASAVSSENFNGXXXXXXXXXXXXXXXXXGGDRQLEKALGELDGGDLLHEITRGS-GKCAWTDLIPDTVAGGLSSAANSGRVLKSREVAELESDVQHIFQFFAAKDGRKRS 737          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig616.26.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L8A2_9PHAE2.800e-13144.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSW7_ECTSI3.530e-12045.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 337..357
NoneNo IPR availableCOILSCoilCoilcoord: 301..321
NoneNo IPR availableCOILSCoilCoilcoord: 133..183
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 411..662
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 511..526
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 362..398
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 577..596
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 542..574
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 696..726
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 624..638
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..278
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 597..614
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 710..726

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig616contigP-littoralis_Contig616:99380..112010 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig616.26.3mRNA_P-littoralis_Contig616.26.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig616 99380..112166 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig616.26.3 ID=prot_P-littoralis_Contig616.26.3|Name=mRNA_P-littoralis_Contig616.26.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=798bp
MPVARSTAFVSFDAQQRRSEGINGALTPARPHRTPQQQQQLQQRRHTNSK
TLNDIYAATLDKMTTTAPAGQQQGRGRGGGALFGHEPGKLASGEGISLQE
TETRIVELERSEFDLKLRLFYMGEQLELASGGADVLQLHKETMDAKLQRA
QAEEAVRTAREALSEVEVKCGELQTQVRDVKAQRTKDRENWATIQGQDEA
RLQKHTRLIEDALKTERAENARLRLAADANSRRGSWDGGGQQSRPPPRRK
STGDGACGQVGGHGGTSTGGFGREDRLQQQQQLTAKVRSQDSSLRSLRAD
VTTLRRRLRTQAETLARQKEETVVVRQAAEQVACVEAEEIARLAVDLERA
VQAAHAEAEARRHAEERLAAAETRLWQRKTGGHAQRPASPARSPRGGAGC
KILCRGDVDGGREGGRGGRTADFTAEDVFQAPSERNSERESSPLPTPRGA
LGSTIASRARVVSGGPANRRKEFSTCSKGEGRSSSSPQGGRGAEVVEQRR
PWGSSPPPSPRRGRGNGSSLSVTTSRRRPLADAGAASAEQQESPRRHPKD
RLPGERRDESSAASRCDHGWRGDVTDKTQLPGTTTTTTTTTTVNRYDRGS
RHSHVGEREADTAGERGGSSATRRRGGDNDTTTLTEADATTEARRERKPD
GGGGGGGGLATSSVAEAVAAAMSGVDLTETIARVLRAAVATAPVSSSSPG
SADVNDRSSGQDTRANDSREQRRGETRLGCYEGRDLLSYMRQGDRNKSAW
GSGKPAATVGAPSVDGGRFLKSREVAELESDVQHIFRFFAAKDGRRLS
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