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Homology
BLAST of mRNA_P-littoralis_Contig616.26.3 vs. uniprot
Match: A0A6H5L8A2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8A2_9PHAE) HSP 1 Score: 420 bits (1079), Expect = 8.290e-131 Identity = 374/835 (44.79%), Postives = 442/835 (52.93%), Query Frame = 1
Query: 169 RSTAFVSFDAQQRRSEGINGALTPARPHRTPQQQQQLQQRRHTNSKTLNDIYAATLDKMTTTAPAGQQQGRGRGGGALFGHEPGKLASGEG------------------------ISLQETETRIVELERSEFDLKLRLFYMGEQLELASGGADVLQLHKETMDAKLQRAQAEEAVRTAREALSEVEVKCGELQTQVRDVKAQRTKDRENWATIQGQDEARLQKHTRLIEDALKTERAENARLRLAADANSRRGSWD----GGGQQSXXXXRRKSTGDGA-CGQVGGH--GGTSTGGFGREDRLQQQQQLTAKVRSQDSSLRSLRADVTTLRRRLRTQAETLARQKEETVVVRQAAEQVACVEAEEIARLAVDLERAVQAAHAEAEARRHAEERLAAAETRLWQRKTGGHAQRPASP--ARSPRGGAGCKILCRGDVDGGREXXXXXXXXXXXXXDVFQAPSERNSERESSPLPTPRGALGSTIASRARVVSGGPANRRKEFSTCSKGEGRSSSSPQGGRGAEVVEQRRPWGSSPPPSXXXXXXXXXXXXXXXXR-----RRPLADAGAASAEQQESPRRHPKDRLPGERRDESSAASRCDHGWRGDVTDKTQLPGTTTXXXXXXXVNRYDRGSRHSHVGEREADTAGERGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLATSSVAEAVAAAMSGVDLTETIARVLRAAVATAPVSSSSPGSADVNDRSSGQDTRANDSRE---QRRGETRLGCYEGRDLLSYMRQGDRNKSAWGSGKPAATVGAPS--VDGGRFLKSREVAELESDVQHIFRFFAAKDGRR 2544
RSTAF SFD Q R EGING+LTPARP R N+K+ + I D A +QG RG L H G++ +GEG I+LQ TE +I ELER EFDLKL+LFYM EQLELA+GG DVLQLHKE M+AKL RAQAEE R A +ALS +E KC ELQ QVRDV+AQR KDRENWA+++G+ E +L+KHT L+EDAL+ ERAEN RLR A D +RR SWD G QQ RR+S+G+ QVG G S GG RE + +QL AKVRSQDSSLRSLRADV+TLRRRLRTQAETL +Q+EE VR+AAEQVACVEAEEIARLAVDLERAV+AA+AEAE RRHAE+ L AAETRL G P ARSPR AG ++ + R +P + + S LP RGALGSTIASR R + A RRK+ +RRPWGSSPPPS RRP G AEQ+ +P R R PGE AA R G RG+ T+ + TT N D VG READ+AGE + +A +AAA+ GVDL TIAR LRAAVAT P S+ S + + D GQ T A S R+ E LG + DLL+ + +G K AW + P G S +GGR LKSREVAELESDVQHIF+FFAAKDGR+
Sbjct: 4 RSTAFSSFDVQPRSGEGINGSLTPARPPRQ-------------NTKSTHGIPIYPYDASNENASRHARQGD-RGSAGLSAHV-GEVVAGEGMPSGLRQGSRSSDPLTGCAAGKGGINLQATEAKIDELERGEFDLKLKLFYMEEQLELAAGGTDVLQLHKEVMEAKLHRAQAEERARAAGDALSGLEAKCRELQAQVRDVEAQRAKDRENWASLEGESETKLRKHTHLLEDALRAERAENQRLRAARD--NRRRSWDVPGGSGEQQPRASPRRRSSGEYEHVDQVGPRRVGNGSWGGLAREHH-EHDRQLAAKVRSQDSSLRSLRADVSTLRRRLRTQAETLVKQREENTTVRRAAEQVACVEAEEIARLAVDLERAVRAANAEAEKRRHAEKCLQAAETRLLDATAGCSPLVLPRPERARSPRASAG-RVEAPARREAARVCRKPFGPPAVEGCTPPGSPKGGSEKASGSSLPPSRGALGSTIASRGRSAA---AARRKD-EXXXXXXXXXXXXXXXXXXXXXXXKRRPWGSSPPPSPPRGGSFLGKPAIGSKLNPSRLRRP----GDNEAEQKRTPPR----RRPGEL---IGAAKREAAGSRGNGTESRGVQTGTTQ-------NPSD-----FSVGPREADSAGES--------RRGVFTTVEWRGSTAPRVDKTAKPRIEAASAGRDQGITPMAGGIAAAIRGVDLKATIARELRAAVATTPASAVSSENFNGGD-GGGQRTPAGGSAPAGGDRQREKALGELDEGDLLNEISRGS-GKCAWAALIPDTVAGGLSSAANGGRALKSREVAELESDVQHIFQFFAAKDGRK 782
BLAST of mRNA_P-littoralis_Contig616.26.3 vs. uniprot
Match: D7FSW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSW7_ECTSI) HSP 1 Score: 389 bits (999), Expect = 1.370e-119 Identity = 341/743 (45.90%), Postives = 400/743 (53.84%), Query Frame = 1
Query: 418 GKLASGEGISLQETETRIVELERSEFDLKLRLFYMGEQLELASGGADVLQLHKETMDAKLQ-----------RAQAEEAVRTAREALSEVEVKCGELQTQVRDVKAQRTKDRENWATIQGQDEARLQKHTRLIEDALKTERAENARLRLAADANSRRGSWD----GGGQQSXXXXRRKSTGDGA-CGQVGGH--GGTSTGGFGREDRLQQQQQLTAKVRSQDSSLRSLRADVTTLRRRLRTQAETLARQKEETVVVRQAAEQVACVEAEEIARLAVDLERAVQAAHAEAEARRHAEERLAAAETRLWQRKTGGHAQRPASP--ARSPRGGAGCKILCRGDVDGGREXXXXXXXXXXXXXDVFQAPSERNSERESSPLPTPRGALGSTIASRARVVSGGPANRRKEFSTCSKGEGRSSSSPQGGRGAEVVEQRRPWGSSPPPSXXXXXXXXXXXXXXXXR-----RRPLADAGAASAEQQESPRRHPKDRLPGERRDESSAASRCDHGWRGDVTDKTQLPGTTTXXXXXXXVNRYDRGSRHSHVGEREADTAGE--RGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLATSSVAEAVAAAMSGVDLTETIARVLRAAVATAP---VSSSSPGSADVNDRSSGQDTRANDSREQRRGETRLGCYEGRDLLSYMRQGDRNKSAWGSGKPAATVGAPS--VDGGRFLKSREVAELESDVQHIFRFFAAKDGRRLS 2550
G A+ GI+LQ TE +I ELER EFDLKL+LFYM EQLELA+GG DVLQLHKE M+AKL RAQAEE + A +ALS +E KC ELQ QVRDV+AQR KDRENWA + G+ E +L+KHT L+EDAL+TERAEN RLR+A D +RR SWD G QQ RR+S+G+ QVG G S GG RE +Q +QL AKVRSQDSSLRSLRADV+TLRRRLRTQAETLA+Q+EE VR+AAEQVACVEAEEIARLAVDLERAV+AA+AEAE RRHAE+RL AAETRL G P ARSPR AG ++ + R +P+ S LP RGALGSTIASR R + A RRKE + + P+G R E +RRPWGSSPPPS RRP G AEQ++ P R + G + ES+ + RG T TQ P + VG READ+AGE RGG L + +AAA+ GVDL TIAR LRAAVAT P VSS + R+ E LG +G DLL + +G K AW P G S + GR LKSREVAELESDVQHIF+FFAAKDGR+ S
Sbjct: 37 GCAAANGGINLQATEAKIDELERGEFDLKLKLFYMEEQLELAAGGTDVLQLHKEVMEAKLSFVVTATAPARHRAQAEERAQAAGDALSGLEAKCRELQAQVRDVEAQRAKDRENWAMLDGESETKLKKHTHLLEDALRTERAENQRLRVARD--NRRRSWDVPGGSGEQQPRAPPRRRSSGEYEHVHQVGPRRVGSGSWGGLAREHH-EQDRQLAAKVRSQDSSLRSLRADVSTLRRRLRTQAETLAKQREENTTVRRAAEQVACVEAEEIARLAVDLERAVRAANAEAEKRRHAEKRLQAAETRLLDATAGCSPLVLPRPERARSPRASAG-RVEAPALREAARVCRKPFGPAAAEGCTPPGSPNGDGERASGSSLPPSRGALGSTIASRGRSAA---AARRKEEGSSAGXXXXXXXXPRG-RDTETKGKRRPWGSSPPPSPPRGGSLLGKPTVASKLNPSRLRRP----GENEAEQKQPPPRRRPGEVIGAVKRESTGSPGNGTESRGVQTGTTQDPSDCS-------------------VGPREADSAGESRRGG----------FTTVGRGGSTAPHVDETAEPRIEAASAGRDLGITPTVGGIAAAIRGVDLKATIARELRAAVATTPASAVSSENFNGXXXXXXXXXXXXXXXXXGGDRQLEKALGELDGGDLLHEITRGS-GKCAWTDLIPDTVAGGLSSAANSGRVLKSREVAELESDVQHIFQFFAAKDGRKRS 737
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 0 |
| Start | 1 |
| Model size | 2550 |
| Hectar predicted targeting category | other localisation |
| Exons | 7 |
| Ec32 ortholog description | Spindle associated |
| Ec32 ortholog | Ec-27_006640.1 |
| Cds size | 2394 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680791284.2465086-CDS-P-littoralis_Contig616:99379..99621 | 1680791284.2465086-CDS-P-littoralis_Contig616:99379..99621 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig616 99380..99621 - |
| 1680791284.2609003-CDS-P-littoralis_Contig616:99700..100859 | 1680791284.2609003-CDS-P-littoralis_Contig616:99700..100859 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig616 99701..100859 - |
| 1680791284.2722785-CDS-P-littoralis_Contig616:101377..101582 | 1680791284.2722785-CDS-P-littoralis_Contig616:101377..101582 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig616 101378..101582 - |
| 1680791284.2841156-CDS-P-littoralis_Contig616:101886..102059 | 1680791284.2841156-CDS-P-littoralis_Contig616:101886..102059 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig616 101887..102059 - |
| 1680791284.2950335-CDS-P-littoralis_Contig616:103084..103171 | 1680791284.2950335-CDS-P-littoralis_Contig616:103084..103171 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig616 103085..103171 - |
| 1680791284.3065035-CDS-P-littoralis_Contig616:103718..103805 | 1680791284.3065035-CDS-P-littoralis_Contig616:103718..103805 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig616 103719..103805 - |
| 1680791284.3202581-CDS-P-littoralis_Contig616:111569..112010 | 1680791284.3202581-CDS-P-littoralis_Contig616:111569..112010 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig616 111570..112010 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680791284.3336911-UTR-P-littoralis_Contig616:112010..112166 | 1680791284.3336911-UTR-P-littoralis_Contig616:112010..112166 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig616 112011..112166 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig616.26.3 >prot_P-littoralis_Contig616.26.3 ID=prot_P-littoralis_Contig616.26.3|Name=mRNA_P-littoralis_Contig616.26.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=798bp
MPVARSTAFVSFDAQQRRSEGINGALTPARPHRTPQQQQQLQQRRHTNSK TLNDIYAATLDKMTTTAPAGQQQGRGRGGGALFGHEPGKLASGEGISLQE TETRIVELERSEFDLKLRLFYMGEQLELASGGADVLQLHKETMDAKLQRA QAEEAVRTAREALSEVEVKCGELQTQVRDVKAQRTKDRENWATIQGQDEA RLQKHTRLIEDALKTERAENARLRLAADANSRRGSWDGGGQQSRPPPRRK STGDGACGQVGGHGGTSTGGFGREDRLQQQQQLTAKVRSQDSSLRSLRAD VTTLRRRLRTQAETLARQKEETVVVRQAAEQVACVEAEEIARLAVDLERA VQAAHAEAEARRHAEERLAAAETRLWQRKTGGHAQRPASPARSPRGGAGC KILCRGDVDGGREGGRGGRTADFTAEDVFQAPSERNSERESSPLPTPRGA LGSTIASRARVVSGGPANRRKEFSTCSKGEGRSSSSPQGGRGAEVVEQRR PWGSSPPPSPRRGRGNGSSLSVTTSRRRPLADAGAASAEQQESPRRHPKD RLPGERRDESSAASRCDHGWRGDVTDKTQLPGTTTTTTTTTTVNRYDRGS RHSHVGEREADTAGERGGSSATRRRGGDNDTTTLTEADATTEARRERKPD GGGGGGGGLATSSVAEAVAAAMSGVDLTETIARVLRAAVATAPVSSSSPG SADVNDRSSGQDTRANDSREQRRGETRLGCYEGRDLLSYMRQGDRNKSAW GSGKPAATVGAPSVDGGRFLKSREVAELESDVQHIFRFFAAKDGRRLS back to topmRNA from alignment at P-littoralis_Contig616:99380..112166- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig616.26.3 ID=mRNA_P-littoralis_Contig616.26.3|Name=mRNA_P-littoralis_Contig616.26.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=12787bp|location=Sequence derived from alignment at P-littoralis_Contig616:99380..112166- (Pylaiella littoralis U1_48) GGAAGGTTTCGAGGTTTCCCACTGAACCATCGGTCTACCCACACTTGAAA
ATACGAGCTGCGAGCCCCCCATTTGGTGCCCTCAAGAGCCAGTCCACCAG
CCCTGACACATAGAGACGTCGGTAGGTCATGTGCCGCGGCCTATGCGCCA
GAATAGATGCCGGTCGCGAGGTCAACCGCGTTTGTGTCTTTCGACGCGCA
GCAGCGAAGAAGCGAAGGAATCAACGGCGCCCTCACTCCAGCCCGCCCGC
ACCGCACACCCCAGCAGCAGCAGCAGCTGCAGCAGCGGCGTCACACCAAC
TCGAAAACCCTCAACGACATTTACGCCGCAACACTTGACAAGATGACAAC
AACAGCACCTGCTGGACAGCAACAGGGGCGAGGGCGAGGCGGTGGTGCGC
TTTTTGGCCACGAACCGGGGAAGCTTGCGAGCGGGGAGGGCATCAGCTTG
CAGGAAACGGAGACCAGGATAGTTGAGCTCGAACGGAGCGAGTTCGACCT
CAAGCTCAGGCTATTTTACATGGGGGAGCAGCTTGAGTTGGCTTCTGGGG
GGGCTGACGTGCTCCAGCTCCACAAGGAGACAATGGATGCCAAGCTGGTG
AGTGTATGTATGTTATTTCTTGCCTTTGCGCTCTGTTCACGTCCACGCCG
TGTCGTTACCCGCAACCTTCTCCGCTGGACGCCGACGCACCGTTTGTGGC
TTTGGAATCGGCTGCTGGTAAACTTTGACCAAACTACACAGCAGTAGTAC
ATACCGATTGTGATTGTCATTTGTTTGATACAAACAAATGCAGACGTAGA
GGCTGGTACATGCACCCCGTACGCCTCGTTGTACTCAAGTATTTGTATTT
TTATTTTTATTTACTTTCAAAGTATGTACTCCGAGTATAATATTCAAGGA
GTGTATCATACGAAGTACATCACATACATATCGTACCTTCGAAGTATATA
CTCCGAAGTATGATACATTGGACAAACAGGGGCTCTCTCACCTCACAACC
TTTCGTTCAAAGTTCAAACAGGGGGGCGATCATGCATATGTTGCGAGAAC
TTGCTGTATGCTGTTTGTAGCGAGTTTCTAGAGACAAACGTATCGCTCAA
GGGGGTGTGTTAAACACCGTCATTCATGACAGGCACCCTACGATGATTGA
GACAAGGCCCCGCTCCTTATCCCGAAAGGAACACTTCAATGAGTTTGAGA
GCACTCACTGCGGGGTGGGGGGTGGGGGGGGGTACACTTATGTTTTGCTT
ACCTATAATAACACTCGGTGCTGCACGCTGCACGTCGAACAAAAAGTAAT
ATCATACGAAGTACGAAGTACTTTAACCCTTGTGGTACTGGGCTCTTCAC
AGGAGGCTGGCCGAGTAGCCTGCCTTTGTTTTTTTTCATCGGGCAGAAAG
GTTCCTTTTCGCACAGAGTAGACAGTCCTGAGCAGAACACAAGTCAATCT
CGCCGCTTTCTACAGTGCATGTCCGGTTGCGAAGTGCAGCAGCACATCCC
CACAGCACGAACTAAATACACGCAGAGACCGCGACAAAGGTCCGCGATGG
GCTGGATCGATTGGTCTGGAAAGTAGAAGGGTCGCTCGGCCGTGTTCCTG
TCGCCGACAGAGCTGGGAACGTGCATCCTGGTGGTGCTGCTGTGTTCCAG
CTGATGTCTTTTTTCAGTATATATCATACTGTCCATCTCAGGTGCACATA
TTTTCCCTCTTGAAGGTTTTTCTGCATATGCACTTCTCTACGCCCCTCGA
GGCGCAGGCCTTCGGCCTCTCTAGCGCACCTAGGCTGCTGCTGCTGCTGC
AGCCGCTGTCCGCTTGCTGTGAGTCACTATGCCAACGGCTTCCTCTGCGA
AGCACGCACACCATGTCTATCCTGCCCGCGGTTGATGTTGCGGCCTACAC
GGCGGGGAATAAGACCGCCTGCTACGACCAACTTGTTTCGTTCATCACAG
CCTTGCCAGATGGAGAAGATCCCCGCATCCAGTAGTCCGGGCCGAATAAT
AAAAATAAAATAAAATGCTCAATTCTGATGGACAATCCTACCCTCGCTGA
GGCTCAGGAGAGTCAAGTACAAAGCAGTCCTAAAATATTTTGTCCCAGAG
TGGGAAACCTGGAAAATATTTCTTCAGTGACAGCTGCATCTGTTCTCTGT
TATAATTCTGTATATATTATGGTTGGATGGCCAATACCGCAATTCCGAGT
TGACACAGGAGAGCACGCATGTTATCATCTCTCCATGTAAAGAACCCCAC
GGTTTATCAAATTCCGACTCCCGTCATAGAACCAATCGGCACAAGCACAG
CTCCCGCAGCTTCTCGGTGAAAAACAGACCCGACGTGAAACACAGACGCG
GCCCAACCCTGACAAGCAGCACCGCCGTGACTGCAACTGACGACTAGAAC
GCGCTCATGACGAGACGAAGGGACGCGCTGTTTGGCACTTCGATGCAGTG
TACCAAGAAGAGGACAACTATTCCCACTACGTATTTGTAGCAAACGTGCG
AAGGCTAGAGAGAGAGCAAGACCAATGTGAAAAAGAGCATTTGCACGGAG
CGTGCGTGCTTAACCCCTCTGGGACTAGGCTGTTCATGCAGGTGGCTAGT
CGAGTAGTCTGCTATTTTTTTTTTGTCGGGCAGGAGGGTTCCGTTTCGTG
CAATCTCGCCGCGCATTGCCTCCGAAAAAACAAGTGAGCTCCTGCAAATC
GCCTCGAGAATTGCAGCAGCACAGCAGCCATGGCATGAGCTAAAAATACG
CAGGGGCCACGGCAAAGGCCCGCGATAGGCTCGATGGGTTTAGGGTTGCA
TAGTAGAAGGATAGCCCGGCCGCTATTACGAGCCGACAGAGGTAGCATGT
TGGATCCCTGGTTCCGGTGTGTTTGCCCATGCTGTCTATTTCAAGTATCA
TTCAATTGCCCGGAAATAATGCCCGATTTTTCCCGGTTGAAGGTTTTCCT
GTATCTGGAATTCTCTAAGGCCCTGTGTTAACGAAAGTCGGAAAATCATT
ATTGAAATCATTATCATAGTATGATTTTCCGAAAAACCCTTCGAGCCATG
TTAACGAAAGAGCTGAAAAGGCTCTTTGAAGGCCTGTAAACGCCAGCATA
ATGCAAACCTCTGATGATGACGACGCGACGGGTAAAACAGAACAATAAAA
TATACTGCTGTACAAAGTACTCCGTACAGCATTACAGCAGTACTTGGACG
TATCATGTGCGTCCTCTCGCATGCAAGGCAAGGTCGTGGGCTCTGTGCAC
CAGGCCTTGATGCTGACAGACACCCCGTTTGTAGATGTGTGCGGTGTGTG
TGTATGTGTGTTGGCTCATACACTCAAGACTGCTGCTGTGTCATGTGTCT
GTCTGCCATGGGCTGTGAGAGGCGGCTTCGTGCTCGTGACCTGTGACCTG
CCTGTCTGTGTCGGATGGTGTGTTGTGCACAATGAAATGTGGGTCGTCAT
CATCAATCATGCAAACTGGTGTGTTTGTTTGTTGCGCAGTCATGTGTGGT
GCTAACATTGGCTTGCCTGGTGCAACGGCAAACCTCTATGCCATGTTCTG
TGGCACCTCTGTTGGTTGCCTCGGTAGTATTTGGTCTGGCCAGCCTCGTG
CGCGAGGCACATCGTTCAGAAAAAGCCTTCGATCGGGTTAAGACCCCCAA
TAATGATTAATGATTTTCTTCCAATTAAGTCTTTTTGGACTTCTTTGGTC
TCGAAGGGTTTTTCGGAAAATCATTGGCGTCGTCGGAAGGTAATAAAAGC
TTGGCCAATCAGAGACCTTCCATGATGATGATTTATTCCAATAATGATTT
TCCAACTATCGTTAATACAGGGCCTAATCCCCTGGGTGTGGTGGCCTTCG
GCCTCTTTAGGGTACCCATCGCTGCTGTTGCTGCTGCTGCTGCCTGGTGA
AGGTCAAAGGGTATGGAATTTTTTCCATACCCTTTGGTGAAGGCTTTCGT
AGAGAACGCAATTAAACCATGTCTGTCCTTCCCGCGGTTGACGCTACCGC
CTACACGGAGGGCGGCATAACCGCCTGCTGCAACCAATTCGTCTCGTTCA
TCAAAGCCTTGCCAGATGGAGAAGCCAATGCATGCTGCCTCCCGGAAGTG
CGTCGCATTCACAGACGTGTTTACGATTCCAGAATCCGAGTAGACCGGGC
TGGAACAAAAAAAAAAAATGCTCGATTCTGATGCCCGATTTTTCCCTCTG
AAGGCCCAAAAGGGTTAACTTCCTTCACGCCTACGCACAACTTGCGCCAA
GATGCACCTGCTGGCCCTTGTTTTTTGTGATCCTATACGTATATAGCGCT
TCGAATCACCGTGAGGCATGCAGCGCAGGCCGCGTTTATTTAGTCGGCGT
GAGTTTCTGTTTTAAACTTTAACTGCTGTTGACAACAAACAAGTTGCACC
GCCGCTTTCGAAGAAGGAAAACATAAATTATGAAGAAAACGGTGTGTCAG
ACGAAAATCATTATATACCACACCTATGTCATCCAGCACATTCGTCGCAC
ATTAGCCACAACGAAAGCTCCAAGCACGCCCGTAAAACGGTTTCTTCATG
TGGAAGTTTTGTCCAGATTATTAAGGTTTCGAAAAAGTACCCGGTGAAAA
AACGCTCTCACAGCAGAAGATGAGGCGTCGAATATACTGGTACTAAACCA
CGTCGTGATAACTGCTGTCACAGCAAAAGATGAGGCATTGCATATACTGG
TACTGAACAACGTAAGTGATACCTGCTGTTACAGCAGAAGATGAGGCGTT
GAATATACTGGTACTAAACAACGTAACCAACTTGAAATTTGAAACGAAGA
AATTTGATAAGCCATCAGTGAGAAGGCAAGGAGTGGCACCCGTCGATGTT
CGCGCCCAATCCAGCAGCCACAATCAATTACAATCAGGGGGGCAGGGAAT
GCATGCGACGATAAATTCCCCCCTGGCTCGAACTCCCAAGTATTGCTCAA
GTAAAAAAAATAAAGCTTTTAAACCGCGTATTCTGTTGTATCGGCCAGCA
GTGCTGCTATTTAAAATTTTTGTCTCCATGAAGGGGGCATGAAACGCTCA
AACCATCCGCACAAACTATCTTCCGCACATACTCATTTTTTAGTCTGTAC
ATGACATGCAACAAGAACTGACAGCAGTATTTTGGGCCTTGTGGTGTATC
GGCCTACACTTCTTGTCAATCTAACGGCCGCTGTTGTATCTCTGCCTAAT
GAGGAGTGTCGCACCGGACAACAGGAAAACCCACGTTACCATTCGCTTAA
AGCCTTATGAAGAATGACACACCGGAGGAAAAGGAAACGCACGTTACCAT
TCGCTTAAAGCGTGTCTTAAGGTGTCTTGTAAAAAAGACAACGCGCGTCC
GCAGGACCCCCCCCCTCACACTTTCGCTCCCTCTCCGCCCCCTTTTCCCC
AATCAATCCGAAACGTCCGGGGGGCCGATCCCACCATCTCCCATGTTATT
GTTTTCCAAGCGTGCTCCTTCGCACCGCCCCACTCCATAGAATCATCCGA
TCCGCTATGGGGTTGTCTCTTGATCCGTCAAAGAATGGGAGCGACAACAC
GGCGCTGAATACGTATGATACAGCAGTCAAATAAACAAAAAATGGATTTG
AGTGAAAAAATCCTGGACAATTTCGCGCCCGCATGCGTACCGTAGGAAAC
ATCTGAGGTTACAGTCCAAACTCAAAACGAATAGAACACACACGCACACA
CCTACCGCGGCACACTTGCCCTTTCAGCTCCAGGCGTCGTCCGTCCGTTA
TCCCCGCAATATCCCGTTCTTCCCCCGTGTTCGTCTCCCCAGGCCCAATC
CACCCCCCCCCCCCCCCCCACGAACGCCTCCGAAAATCTCTATCGCTGTC
GTATGTAGCACTCGTCCGATTCCCACACTTCGAGACCGTTCGGAGTCACT
GTCGGCAACCCCCACCACGGACTCGGGGTGTTCGCACCTCCGGGGCGACT
TCTGGACTTGCTGTCATATTCCCCCACCCCCTTGCAGCGCCACCAGCCGC
CGCCGCCGCGCTCGCCACCGATGGCAGCGCAGAAAAGCGTGAAAGTACTC
GCAACGGCTGAGGATTAAAGACGGATCGGGCACGGATGCACCGGGTGCGT
TGCATTGTATAGAGCCCCTGCACCCGCAGGCGAGCGGGCATTTCCTCCCT
TTGCAGCCGCACGTACTTTGCACCGACAGAAGACGGCCAGTTGCCGGGCT
GCAACCGCTTGTTCGGCCGGACAGCCGCAGCACGCAGTCGCGCCCCGGCC
CTGTGACTCTCTCCCGCCTAGCGCCCCCTTAGCTTTCGGGTCGACGCCCC
GCCCGTTTCCGTAGTACCGCCGGTAGTCTCTGTTCGGGACCGTCTCTTTC
GGTTCCACCCTGCCAGTACCCCCGTGACGGCGGTTGGACCGCTCGCTCCG
TAGACGTGCCGACTCGAAACCCGAGCAAACGGCCGTCGTTGTCCTCCTTT
TCCGCCGAGCCTGAGGATGACGAAGCGGATGGCCTCGACGACGGAATCCC
GTACATACGTTGGTTGTCGCGGGGACGTCGGCGAGGAGTACGATATCCCT
GCGCGGTTCTCCCACCACCTCGAGGAAAAGGCAGCCTCGTTGTCGAGAAA
GAACGCGGTTGCCGCGCGAGCTTTTCGGCATGCACTCGTCGATGTCTCCA
GCGGTCCACATCTCAACCTCCCCTACGTACTGTACGAACAACGGGTACAG
CAGTACCAGTAGTATTTTTCGACACGCCCTCAGCCCGCACGCCTTTTACA
GGACGACGTCCCACATTTTCTCAAAGGGTAGTAGACCGGACCGGACCATG
GCCGATGGGAAGTCGCACCCCGCTGAAGCGGTATCATTCATCAGGACGAA
AGCGCGGACCTTGTCGTCCTCGTCGGGTCTCCAGCCCGGAAAGTCAGAAG
CAGGCCACGCCGATTCACTACCGTCCTCTCGAATTCGCCGATTGTGACCC
CCGGCCCTGTGATTTTCACCCACAAATGTTTTTCTGGGCGGTCACCGCCA
CCGCCCCCCGACCACAACGCTTAGTGTTGCCCCATGCTTATTGCACGTGT
GATGGGACGATCGTCCTCTCATCCGTATCGACTGATGTGACGAGCCACTT
CTTCGTAAGTCCTTTTATTGGGGGATTGGGGGGGGGGAGGGTGACCATTG
TTCATTTCCTTTTTATGATTTTATCTTTCTCCTAGTACGGTGTGCGTCTG
GTTCGGGACCACGGGCTAGGCTTGGTGAGGAGAGCTGATGTGAGAATCAA
CAACAACAACAACAACCCCAGCACTGCTTTGACCGCGCGGTGAAGTGAAA
CTCGTGACAGCGTAGCCTCGCCGCCGATGTCCGGGCCGCGTTGTCGCTGC
ACACCCGGATCGGCACAGTTTGCGACAGCGCCGGATGATTGACTCGTTTC
CTGAACGCGCCCGGGCCCCCGCCCCCCGCCCCTCCGCTGTGTCCCCGCCG
GCGCCTGCAGAGCCGCCGACACCAGCTACCGTCACGAACGACTCTTGCAA
CCCCGCGCAAACGCCTCCAGCAACACCCGCGTCTGGACCCCCCACCGCGT
CTCCTCCGTCATAGCACCGAGAGCCTCGGCACCGATGCCGGTCTCTGTGC
CCTTATCCTCACTTGGCTCACCTCCGACACCGGAAAGCGCCACGATTCGT
TCTCGTCCGTTGTCTCTTGTCCACCCCTTGTTTACGTGTACCTTCATGAC
AAGGTCATGCTTGTGCGTGAGGGCTTATGCAGTCGGGGTCATGTCTGGGA
CGGGGGGGATTGGGGATTGTCCGCTACGAGAATCGAGGGTAGATTTGGCG
TCGAATACTGTTGTTCTACTGGTCTTCCCAGATGATATTTCTTACACACC
AGTGTCGTTTTTTCGCTCGTTTGTTTCCTGCCACCTGAACCTCTAAAGCG
CTTCGCAGAGGTTTCGACGAAAAATTTGACGACGTTGGGTGCAAACATGC
CCCGGCAACCGTCACAGCTGGGGAGCTGGAGATTGTTGATCGGGAAGAAA
GTGTGCAGTGATAATTTATTGGTGCATCACCTGGTGGAGTGCCGCGCCCG
TGCACGGCATTTATCCCGCACACATGACCCCGGTTGGAGCGTCTACCTAC
CCGAAAGGTGTAGCGTGGCGTCCAATTAGAGGGATGACAACACACACACA
CACACACACCGCATCGTAGCTCATCACGTTATTTCGAAACGTTTTGTCCA
TGTTCCCCTTTGTGTCCCTGCTGTGCGTAAGATTTCTACGCTTATGCATT
TGGGCGTGTTCGTTCGACCGGTCCTCACATCGGCGGTGTGTGGCCTTGAC
CTTATAGCCCTACCCCTTGAAAAACCTCTCACACTCGATGCCTTTGTGTA
CCTTCGAGCAGCAAAGGGCCCAGGCCGAGGAGGCGGTGCGGACGGCACGC
GAGGCTCTCTCGGAAGTTGAGGTCAAATGCGGGGAGCTCCAGACGCAGGT
ATGTATGCGTGATGTGATGGTTGAAATCAAGAAATTATTGCCGTGTGCCA
TGTCTACGGGATGACAAAATCAAGGCCGACCGACGGTACCGTTCCGGTAT
TTGTTATTTTCCCTCGGCTGTGGTCCGCATCGGTCTGTTCGTCCTTTTGT
TCGTCCAGCCGGTTTGTCCATCCGTCCCTGATTTTTTGTCGCGCGCGTGC
TGCTGCTACATACAACGTGCTGCTGTGCTGTTGTCGCAGTATGATAACGC
AGTTATTTGATACTCGTACGGTATCATAGCGTATTGACAGATCTTTTCCT
CCATCCATTTTTATTTGTGGTCGGTCACCACCAAGTTCAGACATTTTCTC
GAGCGCCCGGATGATACTGCTGTATGTACTTACATGTGCAGTCGTGCCTT
TCTTTTAGACGCCGCGGGATGACGAAACGACGACGACGGCGGCGGCGGCG
GCGGTAATGTGCGCTGACTGCTGTTGCTGGCGTTGCCTTGCCAAACGCGT
GTGCGTCTCTCTTGTTTTTCTGTGACTGGTGTTGGATCGGTTGAGGTGCG
AGACGTTAAAGCGCAGAGGACGAAAGATCGGGAGAATTGGGCCACCATCC
AGGGCCAAGACGAAGCAAGGTTACAGAAACACGTGAGTGATAATTGTGTG
AGATGCACGCTTTACCACTGTGCTAGACAGCAGTCACTGTCTAGCACAGT
GGTAAAGCGTACATCTAACAAAAGTAATATCCGGGGCTCGGACAGCTGTT
AGCTGTTCAGCCACGGATTTCCCCCAGGGTTGTAATCCCTGTAATCAGCG
CTGCCCCATGCGGTTTCGTCGGCGTACAGGGCGGATAAAGCGGTCTGTGG
CTGACTGTCTAGCACAGTGGTAAAGCGTGCATCTAACCTATTGCGGACCG
GATCTTACGCAAGAAAGATGTATTCGTGTGCCTCGATTCTTCGTTATTTT
TGGTGTGTATGACAGACGCTTCAAGTCGCAGGTCGATGTTGTTTCGGCGC
ATGCATGGCATCAGCCCCGTATGAACGACGGGGAAGTCAAGTCAAGTCGT
GTCCGCAAGGGCAAAGTCAGGAGTTTGAGCCGGCATTTTGCGCGGTCGTG
CTCATGGAGGGGTCGGGGGTAGTGCTTGCTGAGCGGGAATCGTTTGTCAA
GTTGCGTCCTTACCCCCCGCTTGGTTCACGCCTAATTCCTGTGTTCGGAA
GAGGGTTGGTAGGCAGCGCTACCTCAAAGCGCGTTTTTCTGTTGGCGATG
ACCTGCCGGTACCTTGTGCGCAACCTCGTGACGTAGTTGATGTATTTACG
GTAGAAATTCGAGAGATCAGGCGACGGTACCATTTTTTTTATCCGGCAGA
ATTGACCTTTTTTTTCACGTTGTGCGGTCACAGCAGTACAAGAAGCATGG
GGGCGCCTGCCTACCCTTGTCGCGTGCATCATGGTCGACTCCTGAAAGTG
GCGCGATTGGTTCTCAAAACCGTCACCACCCGTAGAACTCCCGACGGGCT
GACCTAGTCAGCGCAACAGCAGTCAAACGGTGGTGAGAGCCGCACCAACG
TCTGTCTGTCTGTCTGTCTCCATCGACCCTCAAGAAAGAAAAAAATTGTT
ACTTCGTACTTGTTCTTCGTACAAATTAACCCGGGCACCACTTCGACGCA
CCCGCAGACACGCCTCATTGAGGATGCCCTCAAGACGGAGCGCGCGGAGA
ATGCTCGGCTCCGTCTTGCGGCCGACGCCAACAGCCGGCGGGGGAGCTGG
GATGGAGGCGGGCAGCAGTCGAGACCACCGCCGCGCCGCAAGAGCACAGG
AGATGGCGCCTGTGGTCAGGTAGGTGGGCAGTGAAACAGGAGATCTGCGT
GTAAAACCCGGCATGTTTCTTGAGATGGACCAGGGGTAATAAGCGTCACA
AAGCCCGGTGTACGCATCCGAGAGTAAAGCGTGTAGGCACAACAACTCGC
CACCCTGGGTTACCGCTATTCATTGACGGGGACCGGTGGCGGTTAGATTG
GTAAATTGATTCCTTTGGTATCGTGATTGATCTCTTGCGAAGCACCGTTT
CTTTGGAAGCAATAGCTGCCCACCCTCAGCCTACCGTATGCTGCCCTCGT
TTATTTCTACACTGCAGGGCCCCTGGCGTGGTAGCGGCGGCACGAGCACC
GGCGGCTTCGGGCGTGAGGACCGCCTGCAGCAGCAGCAGCAGCTGACGGC
GAAAGTTCGGTCCCAAGACTCGTCGCTGCGGTCATTGCGCGCTGACGTGA
CGACGCTGAGAAGGCGGCTGAGGACTCAGGCGGAGACGCTGGCAAGGCAG
AAAGAGGAGACCGTTGTCGTGCGACAGGCGGCAGAGCAGGTACGGTCATC
GTTCGTCGTTCATCGGTGCGGGCGGCAGGTCTAGGGGTAGCGATAGGGAC
AAAGTAAATACTTCGTTTGCTTCATAAATCCGGACGTTTTGGCGTTTGCT
GTTGGCCGAAAGGGGCGACGATTCGTTCAACGAAAGCCGGACCCGTTTTG
TACAGGTAGCACGAAGTACAAGTACGGACTAGAGGTGATGGTGGCTTTAT
TTGACGAATATCGCATGCCCTGCTGCTGTCGTAGTATATGCATGTTATGT
TCGCGTATTAAGATGACACATGACACGAATTAGGTCGGGGATGCAGGGGG
GGGTTACGACACGACAGGGGGAGGGGAAGGGCATTGGCCCATGCTTTTTT
CAACATTCCGAGGTCCACGCGATTACGGTAGTCAGTTTTTCCGCCGATCG
CGTTGCCTTGTTGTCGCTCGCGAGGTGCATCGCGTGGCATATGGTATCAT
AGCACTCCTGTAGCGATCTGTTCTCGCACGCGACAAATGATGGGCCCACC
CCCACAGGTGGCTTGCGTAGAGGCGGAAGAGATTGCGAGACTGGCGGTGG
ACCTAGAGCGAGCGGTCCAGGCAGCGCACGCGGAAGCTGAGGCACGCCGT
CACGCGGAAGAGCGCCTCGCGGCTGCCGAAACACGCCTGTGGCAGCGGAA
AACCGGAGGGCACGCGCAGCGACCCGCGTCTCCAGCACGGTCCCCTCGTG
GAGGCGCAGGCTGTAAAATCCTCTGTCGCGGTGACGTCGACGGGGGAAGG
GAGGGGGGGCGCGGTGGCAGGACGGCCGACTTCACCGCGGAGGACGTGTT
TCAAGCGCCCTCCGAGAGAAATAGCGAGAGGGAGAGCAGCCCCCTGCCGA
CGCCCAGAGGCGCGTTGGGCAGCACCATCGCCTCGAGGGCGAGGGTCGTT
AGCGGCGGGCCTGCGAACAGGCGGAAAGAGTTTTCCACGTGCTCGAAAGG
CGAGGGGCGGTCCTCAAGTTCGCCGCAGGGAGGCCGGGGCGCGGAGGTGG
TGGAGCAGCGGCGTCCGTGGGGTTCTTCTCCGCCTCCAAGCCCTCGACGC
GGCAGGGGTAACGGGTCCAGCTTGTCAGTCACAACCAGCCGTCGGCGACC
TCTGGCAGACGCAGGGGCTGCCTCTGCAGAGCAACAGGAGTCTCCGCGAC
GCCATCCGAAGGATCGCTTGCCTGGAGAACGTCGAGACGAATCTTCTGCT
GCTTCACGTTGTGACCACGGATGGCGTGGGGATGTAACCGATAAAACACA
GCTACCCGGGACTACAACTACGACGACTACTACTACCACTGTAAACCGGT
ACGACCGGGGTAGCAGACATTCCCACGTCGGCGAGAGAGAGGCGGACACT
GCTGGTGAGCGAGGGGGGTCTTCCGCGACAAGGAGGAGAGGAGGGGATAA
CGATACCACTACTCTCACTGAAGCAGACGCAACCACGGAGGCCCGGAGGG
AAAGGAAGCCTGATGGCGGCGGCGGCGGCGGCGGCGGCCTAGCGACGTCG
TCGGTGGCAGAGGCGGTTGCGGCGGCAATGAGCGGGGTGGACTTGACCGA
AACCATCGCGCGAGTGCTTCGGGCGGCCGTGGCCACGGCCCCCGTATCGT
CGTCCTCCCCCGGTAGCGCTGACGTGAACGACCGCAGCAGCGGACAGGAC
ACGCGCGCTAATGACAGTGGCAGCGGCGGCGGCGGGGGGGGCGGACGAGA
GCACTGCCGATGGGATCACAAGCGGCCGCTGGAGCGATTCACGAGGCCGC
GAGCAACGGCGGGGGGAGACGAGGTTGGGGTGTTACGAGGGAAGAGACTT
GTTGAGTTACATGAGGCAAGGCGACCGCAACAAGTCTGCGTGGGGTAGCG
GTAAGCCTGCTGCCACGGTGGGTGCGCCGTCAGTGGATGGCGGGCGGTTC
CTGAAGAGTCGGGAAGTTGCCGAGCTTGAATCGGACGTGCAGCACATCTT
TCGGTTTTTCGCGGCCAAAGATGGAAGGAGACTCTCT back to topCoding sequence (CDS) from alignment at P-littoralis_Contig616:99380..112166- >mRNA_P-littoralis_Contig616.26.3 ID=mRNA_P-littoralis_Contig616.26.3|Name=mRNA_P-littoralis_Contig616.26.3|organism=Pylaiella littoralis U1_48|type=CDS|length=2394bp|location=Sequence derived from alignment at P-littoralis_Contig616:99380..112166- (Pylaiella littoralis U1_48) ATGCCGGTCGCGAGGTCAACCGCGTTTGTGTCTTTCGACGCGCAGCAGCG AAGAAGCGAAGGAATCAACGGCGCCCTCACTCCAGCCCGCCCGCACCGCA CACCCCAGCAGCAGCAGCAGCTGCAGCAGCGGCGTCACACCAACTCGAAA ACCCTCAACGACATTTACGCCGCAACACTTGACAAGATGACAACAACAGC ACCTGCTGGACAGCAACAGGGGCGAGGGCGAGGCGGTGGTGCGCTTTTTG GCCACGAACCGGGGAAGCTTGCGAGCGGGGAGGGCATCAGCTTGCAGGAA ACGGAGACCAGGATAGTTGAGCTCGAACGGAGCGAGTTCGACCTCAAGCT CAGGCTATTTTACATGGGGGAGCAGCTTGAGTTGGCTTCTGGGGGGGCTG ACGTGCTCCAGCTCCACAAGGAGACAATGGATGCCAAGCTGCAAAGGGCC CAGGCCGAGGAGGCGGTGCGGACGGCACGCGAGGCTCTCTCGGAAGTTGA GGTCAAATGCGGGGAGCTCCAGACGCAGGTGCGAGACGTTAAAGCGCAGA GGACGAAAGATCGGGAGAATTGGGCCACCATCCAGGGCCAAGACGAAGCA AGGTTACAGAAACACACACGCCTCATTGAGGATGCCCTCAAGACGGAGCG CGCGGAGAATGCTCGGCTCCGTCTTGCGGCCGACGCCAACAGCCGGCGGG GGAGCTGGGATGGAGGCGGGCAGCAGTCGAGACCACCGCCGCGCCGCAAG AGCACAGGAGATGGCGCCTGTGGTCAGGTAGGTGGGCACGGCGGCACGAG CACCGGCGGCTTCGGGCGTGAGGACCGCCTGCAGCAGCAGCAGCAGCTGA CGGCGAAAGTTCGGTCCCAAGACTCGTCGCTGCGGTCATTGCGCGCTGAC GTGACGACGCTGAGAAGGCGGCTGAGGACTCAGGCGGAGACGCTGGCAAG GCAGAAAGAGGAGACCGTTGTCGTGCGACAGGCGGCAGAGCAGGTGGCTT GCGTAGAGGCGGAAGAGATTGCGAGACTGGCGGTGGACCTAGAGCGAGCG GTCCAGGCAGCGCACGCGGAAGCTGAGGCACGCCGTCACGCGGAAGAGCG CCTCGCGGCTGCCGAAACACGCCTGTGGCAGCGGAAAACCGGAGGGCACG CGCAGCGACCCGCGTCTCCAGCACGGTCCCCTCGTGGAGGCGCAGGCTGT AAAATCCTCTGTCGCGGTGACGTCGACGGGGGAAGGGAGGGGGGGCGCGG TGGCAGGACGGCCGACTTCACCGCGGAGGACGTGTTTCAAGCGCCCTCCG AGAGAAATAGCGAGAGGGAGAGCAGCCCCCTGCCGACGCCCAGAGGCGCG TTGGGCAGCACCATCGCCTCGAGGGCGAGGGTCGTTAGCGGCGGGCCTGC GAACAGGCGGAAAGAGTTTTCCACGTGCTCGAAAGGCGAGGGGCGGTCCT CAAGTTCGCCGCAGGGAGGCCGGGGCGCGGAGGTGGTGGAGCAGCGGCGT CCGTGGGGTTCTTCTCCGCCTCCAAGCCCTCGACGCGGCAGGGGTAACGG GTCCAGCTTGTCAGTCACAACCAGCCGTCGGCGACCTCTGGCAGACGCAG GGGCTGCCTCTGCAGAGCAACAGGAGTCTCCGCGACGCCATCCGAAGGAT CGCTTGCCTGGAGAACGTCGAGACGAATCTTCTGCTGCTTCACGTTGTGA CCACGGATGGCGTGGGGATGTAACCGATAAAACACAGCTACCCGGGACTA CAACTACGACGACTACTACTACCACTGTAAACCGGTACGACCGGGGTAGC AGACATTCCCACGTCGGCGAGAGAGAGGCGGACACTGCTGGTGAGCGAGG GGGGTCTTCCGCGACAAGGAGGAGAGGAGGGGATAACGATACCACTACTC TCACTGAAGCAGACGCAACCACGGAGGCCCGGAGGGAAAGGAAGCCTGAT GGCGGCGGCGGCGGCGGCGGCGGCCTAGCGACGTCGTCGGTGGCAGAGGC GGTTGCGGCGGCAATGAGCGGGGTGGACTTGACCGAAACCATCGCGCGAG TGCTTCGGGCGGCCGTGGCCACGGCCCCCGTATCGTCGTCCTCCCCCGGT AGCGCTGACGTGAACGACCGCAGCAGCGGACAGGACACGCGCGCTAATGA CAGCCGCGAGCAACGGCGGGGGGAGACGAGGTTGGGGTGTTACGAGGGAA GAGACTTGTTGAGTTACATGAGGCAAGGCGACCGCAACAAGTCTGCGTGG GGTAGCGGTAAGCCTGCTGCCACGGTGGGTGCGCCGTCAGTGGATGGCGG GCGGTTCCTGAAGAGTCGGGAAGTTGCCGAGCTTGAATCGGACGTGCAGC ACATCTTTCGGTTTTTCGCGGCCAAAGATGGAAGGAGACTCTCT back to top
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