mRNA_P-littoralis_Contig616.18.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig616.18.1
Unique Name	mRNA_P-littoralis_Contig616.18.1
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig616.18.1 vs. uniprot
Match: A0A6H5L7I3_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L7I3_9PHAE)

HSP 1 Score: 337 bits (864), Expect = 8.840e-95
Identity = 291/568 (51.23%), Postives = 325/568 (57.22%), Query Frame = 2

Query: 1331 EFPLNLECAMCFNPLAVAALFACGHGSCWECAHDWCSRDTSPTMDCPTCHVSVPRNDFRRCVVLDQVVDRAVLAAGMDDDEWRARLQRGQQLAREAESNRRDSRDNQRSAEDTIAKQAAELEKLRKEAKSRVLERRSVRSYEQGFPPSMADYGFRLMGGG------ARDVLDPASHKSAIEEITRFRHRRAEAGEPESSSRDARASGDAAVVAAA---ALGMPPSAAYGGARPRGPTH-------------PGFGPAEGDPWFSLRSSQPGRYPSVAMSAGR-MGREMLGRTHGLSRSAGNSAAG---MGLVHPHLPGSALKSSR---ELASGGSNWRS-AYLEEDRL-LSSGAG----GARTLHHLSVGSRGSP-------VGHVRGGAALERGPPVTRRGDPTAHASSSACFSS--KRFGISS----GAGSGGAFGGVGAAPSASSSSHP--LVGGVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAEQPTPALDLEELMSGQDDPGSRSEWDDVLASISMPHVGADRGMGRSEEPPGTTRG 2884
            E P  LECA+CFNPLAVAALFACGHGSCWECAHDWCSR+TS TMDCPTCHVSVPR+DFRRCVVLD+VVDRAV AAGMDDDEWRAR++RGQ+LAREAE  RR  RD QRSAEDTIA+QAAELEKLR+EAKSR + RR++R+ E G   SMA++GF ++ GG       RD  DPAS +S                                        A GMPPSAAYG   PRG  H              GFG AEGDPWFSLR SQP R  + AM+ GR M RE  GR+    RSAGNSAA    MGL  P    +ALKS         GG+NWRS AYL   R  LS GAG    G RT  H S  +R  P       VG    G  L+ G      G P    +      S  K  G+S     GA + G   G  AA   +S+S+P  L  G+G       XXXXXXXXXXXXXXXXXXXXXX               XXXXXXX      P LDL +LM+G DD  SRSEWDDVLASIS P    D     S   PG TRG
Sbjct:  299 ELPRILECAVCFNPLAVAALFACGHGSCWECAHDWCSRETSSTMDCPTCHVSVPRSDFRRCVVLDEVVDRAVTAAGMDDDEWRARVERGQKLAREAEGRRRSLRDAQRSAEDTIAEQAAELEKLREEAKSRRVGRRALRAQE-GSTSSMAEFGFGVLNGGNLTGGRRRDFFDPASQRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFGMPPSAAYGVVGPRGHAHRHPLSAAAAAAGSSGFGHAEGDPWFSLRPSQPSRGATGAMAPGRRMARETAGRSGSSGRSAGNSAAXXXXMGLGQPAA--AALKSVHGHGRAGGGGTNWRSSAYLHPGRSSLSGGAGXXXXGGRTRLHGSS-ARADPRGGTDVNVGSAAAGTPLDGGNLTNPVGGPGRSFTVQVPARSIRKTHGLSGLHGGGASASGGHAGSAAAVVGTSTSYPNPLANGLG---LAPPXXXXXXXXXXXXXXXXXXXXXXGDGLPFGGRTHGRAAXXXXXXXXXXXXAPMLDLGDLMAGHDDASSRSEWDDVLASISTPMQATDDARSNS---PGATRG 856

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig616.18.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig616.18.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5L7I3_9PHAE	8.840e-95	51.23	RING-type domain-containing protein n=2 Tax=Ectoca...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig616	contig	P-littoralis_Contig616:72100..83850 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Model size	4731
Hectar predicted targeting category	other localisation
Exons	5
Ec32 ortholog description	Zinc finger, RING/FYVE/PHD-type
Ec32 ortholog	Ec-27_006630.1
Cds size	2616

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig616.18.1	prot_P-littoralis_Contig616.18.1	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig616 72371..82006 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680791284.09958-UTR-P-littoralis_Contig616:72099..72370	1680791284.09958-UTR-P-littoralis_Contig616:72099..72370	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig616 72100..72370 +
1680791284.1681817-UTR-P-littoralis_Contig616:82006..83850	1680791284.1681817-UTR-P-littoralis_Contig616:82006..83850	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig616 82007..83850 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680791284.115398-CDS-P-littoralis_Contig616:72370..73543	1680791284.115398-CDS-P-littoralis_Contig616:72370..73543	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig616 72371..73543 +
1680791284.1266994-CDS-P-littoralis_Contig616:78778..78862	1680791284.1266994-CDS-P-littoralis_Contig616:78778..78862	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig616 78779..78862 +
1680791284.1364863-CDS-P-littoralis_Contig616:79460..79688	1680791284.1364863-CDS-P-littoralis_Contig616:79460..79688	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig616 79461..79688 +
1680791284.1465394-CDS-P-littoralis_Contig616:80303..80701	1680791284.1465394-CDS-P-littoralis_Contig616:80303..80701	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig616 80304..80701 +
1680791284.1565068-CDS-P-littoralis_Contig616:81273..82006	1680791284.1565068-CDS-P-littoralis_Contig616:81273..82006	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig616 81274..82006 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig616:72100..83850+
coding sequence from alignment at P-littoralis_Contig616:72100..83850+

protein sequence of mRNA_P-littoralis_Contig616.18.1

>prot_P-littoralis_Contig616.18.1 ID=prot_P-littoralis_Contig616.18.1|Name=mRNA_P-littoralis_Contig616.18.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=872bp
MEEMFALFGAGDDDDDDDVEGQAAYGGNGGTGLDMVGEVQVEEEVGEEEE
EENEDEEDAEDADLELSELELRPLKRSRSSRGGISQGALLFGGDDGRRSG
STGRGQVVGGHGEQEVIEIFSDDDEAQQQQEQQQQLLSGFHSDPVRPGRH
SVESCPGRQRQHNRSPAAASEGSSSSSSAAAAATGAGARSSRHSVRCADQ
QGGPKGYHPSAAPGRLMTLRMAAGGSTAGSHKPAGASSAAAGVSASNSHS
SVVVQSWISSSVLGVSEEGEEGKRSEEGKASREAGQADADRSGWLGAAVL
TTTNAGATSNIHQATGDDEESFATTMSSDQAGPLSGSATPGTTAAAAAAA
AAAEFPLNLECAMCFNPLAVAALFACGHGSCWECAHDWCSRDTSPTMDCP
TCHVSVPRNDFRRCVVLDQVVDRAVLAAGMDDDEWRARLQRGQQLAREAE
SNRRDSRDNQRSAEDTIAKQAAELEKLRKEAKSRVLERRSVRSYEQGFPP
SMADYGFRLMGGGARDVLDPASHKSAIEEITRFRHRRAEAGEPESSSRDA
RASGDAAVVAAAALGMPPSAAYGGARPRGPTHPGFGPAEGDPWFSLRSSQ
PGRYPSVAMSAGRMGREMLGRTHGLSRSAGNSAAGMGLVHPHLPGSALKS
SRELASGGSNWRSAYLEEDRLLSSGAGGARTLHHLSVGSRGSPVGHVRGG
AALERGPPVTRRGDPTAHASSSACFSSKRFGISSGAGSGGAFGGVGAAPS
ASSSSHPLVGGVGGGGGGGGGSSPSPSPQRFDGFGGQGQREHSSRGGGGG
GGVGHFVSRGRGNGRAEQPTPALDLEELMSGQDDPGSRSEWDDVLASISM
PHVGADRGMGRSEEPPGTTRG*

mRNA from alignment at P-littoralis_Contig616:72100..83850+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig616.18.1 ID=mRNA_P-littoralis_Contig616.18.1|Name=mRNA_P-littoralis_Contig616.18.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=11751bp|location=Sequence derived from alignment at P-littoralis_Contig616:72100..83850+ (Pylaiella littoralis U1_48)
ACAGCTCGGTTTCAGCTCTTCTCCCCATAACAGAAAACGTACGACGAATC
TCACTATCTCGGGAGCGCAAACTAACGTGCGTGCCGGAGCTCTGCAACAC
CGCTGATCGAGACCATTCTCGAGGTCTGAGATCCGCGCGACGCTGAGTAA
ACCGCCTGTCAGAGACAACAGAAGCCGGCTGGTACCCCCGAGCTCTCGTG
TGCCCTCTCTGCCTTGTGTATCCCATCTCTCTCCCAATTATTTTCCCATT
TCTCCGCCTCTCTTCCCAAAAATGGAGGAAATGTTTGCCCTATTCGGAGC
AGGCGACGATGACGATGACGATGATGTCGAGGGACAAGCGGCTTACGGCG
GCAACGGAGGAACAGGTCTAGACATGGTGGGAGAAGTTCAGGTGGAGGAA
GAGGTTGGGGAGGAGGAGGAGGAGGAGAACGAGGACGAGGAAGATGCAGA
AGATGCAGACCTTGAGCTCTCCGAACTCGAACTCCGCCCCTTGAAACGGT
CTCGCTCTTCCCGAGGTGGAATATCTCAAGGCGCTCTTCTATTCGGCGGC
GATGATGGGCGCAGAAGCGGCAGCACGGGCCGCGGGCAGGTGGTAGGTGG
TCATGGAGAGCAAGAGGTGATCGAGATTTTCTCGGACGATGATGAGGCCC
AGCAGCAGCAGGAGCAGCAGCAGCAGCTTCTTTCTGGATTCCATTCGGAC
CCAGTCCGACCGGGGCGACACTCCGTGGAAAGTTGTCCAGGTCGTCAGCG
CCAGCACAACAGATCACCCGCAGCAGCCTCGGAAGGATCATCATCATCAT
CATCAGCAGCAGCAGCAGCAACAGGAGCAGGAGCTCGATCGAGCCGGCAC
AGCGTTAGATGCGCGGATCAGCAGGGTGGCCCCAAGGGCTACCACCCCTC
CGCAGCCCCCGGTAGGCTGATGACGCTTCGAATGGCGGCTGGAGGCAGCA
CTGCCGGGTCCCACAAACCCGCTGGTGCTTCCTCAGCCGCTGCCGGTGTT
TCAGCCTCCAATAGCCATAGTAGTGTCGTGGTTCAGTCATGGATTTCATC
ATCCGTTTTGGGCGTAAGCGAGGAAGGAGAGGAGGGAAAACGTTCGGAGG
AGGGCAAGGCTTCTCGTGAGGCTGGACAAGCTGATGCTGATAGATCTGGG
TGGCTGGGAGCCGCAGTGTTGACGACAACGAATGCTGGAGCAACATCGAA
TATCCACCAAGCGACTGGTGACGATGAAGAAAGTTTCGCAACAACCATGA
GCAGCGATCAAGCCGGCCCACTGAGCGGCAGCGCGACCCCAGGAACAACA
GCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGAATTCCCCCTTAACTTGGA
ATGTGCCATGTGCTTCAATCCTCTGGCCGTTGCGGCGCTCTTCGCCTGTG
GCCACGGGTCCTGCTGGGAGTGCGCGCACGACTGGTGTTCGAGGGTGAGT
GAACCACTGAAGTATTCGTATCATGTGATGTGTGAATACTCGTAGTGAGT
ACTTTGCGTTGTTCGAACAAGTTGGGAAAAAAGTTCGTTGCTTTTTTTTT
TTTAAACTTGCAAAACATCAACAGGGATCTTGAGCAGACATTTTGCAACG
AACACAAAATGAGAAATACGTCCACCAGTTTTCTATACTCATCAGATAAT
GTACCGTTGCAGCTCCCCTGAGGGTATCAGGCTCAACAAGACAATTTGGT
GGTCGTCTTGTGCTTCTTTTTATTTTTTCCAGTCACAACAAGAGCAGTTC
CCCCTACAGCAGTACTATGATACGTACCAGGTACTTATTTCATACGAAGC
ACTTCCAAGTATATGATACGTAATATTTACTTCTGTGTGTCGACCTTCCT
CCTGCTGCTTGACCAACATCGGCTGGTGCGCCCGCCCACCTTTTACCGAA
ATGTGCAGACTGGCATCCATGATATATGGGATGACAACGCACGTGTGTCG
TGTTCACTCCTGGTTGTTTCATTTACGACAGCCGTCTAATTTGACTGCCG
CTGATGTGCAGGGTATGACGCGACTACCAGTAGTAGTACTTGGAACAGCA
TCGGTAGCAAGCAGCATCAGCGCAGAAGCCGGGGTGCGGTTCGTATGTAT
GAAGAGCCATAAACCGGTGGATGCAACTACGAGTGTAAGCAGAAAGCAGA
ACACTCCTACTTGAAATCAGACACAGCTTGCGTCGGCTCCTGGACATCAG
GATGGTGTGTCTTTTGTACTTCGTACGTACCTCGTACAAGAAAAACTCCG
AAAGGCTCGATAGAAACAAAAATTGTGCGTATATATTTAGGATGTGGGAT
GTGGCGAAACTTTAATACTTTGCTGTGAGCGAACAAAATCGTACCCGGGA
CGTTATGGTGCGATACCTCTAAAATATCATCGTATGATATGTTACACGAA
GTATGTATCATAGTCGAATGACGGGTCGTTTCCATTTTCCATTTTGTTAC
TGGGCCGGTGAAGAGAGTAGCACGCCCGATGCCCTTTTTATCGACACCTT
GGTAACTGAATTCCGTGTCTTTTTGTCTTTTTGTCACTACTTTTTATTTT
ATTTTTGACTTTTTATTTATTTTTATTTCATTTTGTGACTTGGCTCTGGA
CCAGGCTCCCTTTTCTTGTTTTCTTGTATCTCGTTCTATTTTTGTACAGC
GTTGTGTGATTTCTCGGGGTCCGTTTTTGTTTTTGCTGAAGTCTCCCTTT
CGTGCCCTTATTTGGTGGACTGAGGGGATCTCCTGAAATCATATACCTTT
TCTGGGGCAAGCAGCCTGTGACCACGGAAATCGTACCTGATCGGTGGAGT
ACGGACATTAGAAGGTACTGAGGAGAGATAGGAATGGTTTTTAATGTGAA
GACAACAACAACACCAAGAACAACAACAAAAACGACATTCTCTAGATTCA
TTTATCATAGTGGCTCTTGTCCCCGCGGAATGCCCAAATCAAAAATCAAA
AATCGAAAATCGAAAATTAGATTTCGATTTTAGAAATGGGGTTGGGTCCA
CGCAGCTGTAGCTGCGTTCATCTCAAATCTGAAAAGCGGAGGTACAAAAA
TAATAATAAAAGGAAGAGGCACGACCAGCAAGTCAGAGGATAGGCGGTCG
TGAAATGCATGCAGTGACGATTGTTAAGGCACGATAGTGCCCTTAATCGG
CCTGACTCAGGCGCGTTGGTTTTCCTTAGTTTGAGATCGATAATCGAAAA
AAATATGAAGAAATGCGTGTTTGATTGCGTGTTGCTCACTAGCATACCCT
ACACACCTCCGCTGACCCTTTTAAGAGAGTCAACGAAGCCCACGCATTTA
GCCGTTGTTGTACGTATTCTCTGCAGAGCAACACCATGTATATTACTCGG
ATGAGCTCGTCAGCATCTCGGCAGACTCCCCTCAGACGGAGTTCCCTTCT
TTGCAGTTGGCATTACCATCTTTGTGTGGAGATACCGTTTGTGTACAGCA
GGCAGCTACAAGAAGTTGTGTTATGAGTAAAAGCATACCGGTGTTGATAT
CGAAATGCACAACAGCACCACGTATGTACTACAGTACCGGCCCGCTCATA
AGAAACACCTTTATAAGAAAGCGAGGCGGGAATTTTTCAAAAATTCAGAC
ACTTGGCGTATGAAAATGGGCTCGGCAGCCGGCGCCGCACTAAATCCTAT
ACGATGGTTGAGAAATAGCCATACTTAATGCTGGTGACACAACAAGAAGC
CAAGGCTGAGGCTGATTTCCAGTTTCTTAATAAGCGGGCCGGTACTGTAG
TATGAGAGTCGTGAGCAACAACAGCAGTTGCTGCTGTCTGCACACCTCTG
CATACTTGTGGTGCTTTCCGGATTATTATCGGAATCCGCTCAAACAAAGT
GAAGTGTTTTATACCGGACACCAGCCTTCTGCCGAGGTCATATATAGACA
ACAGGGGGGTACAAGTTGGGCTGTGACCAACTAGGCAAAGACACATCGAT
GTGCACCGATGTGCACCGATGTGCTCCCAGAAAGCACAGCAAACACCTCT
CTGCTCGTGTTCTAGGTCTATTCGATTTTTGAGCCGCATTTTAGATTCTA
AACTCGGGTTTTTTCGATTCTACCCTTTCCTTTAGCTTTCGGAATAAAAA
GGACGAAATCGAAAATCTGCTGGATGCCCCGCATGTGCAGAGGGAAGTTT
GGCCAACCAGAAGTTTTTTAGATCTCGATTTTCGATTTCGATTGGGTTTA
TTTCGGGGACAAGAGCCACGCTCAAACCGTTTCTTACGGCTGTTATTTGG
TCCTGTGTTTTTTCTCTTGAGGTACCCCCCCCCCCCCCCCCAATAACGAA
GAGTCCAAACGGTTGAAAAATCTACTTTTTGAGCACAACAGGAGACAGCA
CCAAGCAGACCTCGACCCCCGGGACACCAATCGAGACTAAAACTGTTGGA
CGGTACGCTCTAGTGTTCTCAGGTTGGCCGCAGGAAATTTGGTGGGTGTG
AGCTTTTAGCTGTGGCGAGGTTTCGGCGACGAAGTGGGTTGAGGCAGGAA
AATTCGGTGGGAAAAAAAACGCTGTCCAAGCCTGTTTTTTGGCTGGAATA
GCAGGAGCGAAATCTGTGTTTTCGTTTCGTCTGTTTTTCCATCTCCAACA
CACACTGCCGCCAAAATCTCGCCACAGCCCGAACCCACTGCCACCAAACT
TCCTGTGGCCAACTTGAGAACATGGTAGCCCACGCTCCATCAGGTTTGAT
CGGCACGTGTGTCCTAGAGGTCGAGTTCTAGTTGGTGCTGTCGCGTGATG
TGTGCAACAGGGCTGTTTGCGGGTGGGGGTGTAGGGGTGTTCTCTGGTTG
GATCCTTGTAAGGGGGTCAAAAGGCCAGGCCAAAATAACGTTGACCGTAA
GAAACAGCCTTATTATATCATATCATATGATACGAAAGGATATCACATCG
TATCAACTTGTTTTGTACGAAGTACTTCGAAGTATACACGTCCGAGGAAA
CGTTATCTCACCGATGTGAAACATTTAGTTAAAGAAGCAACCATATCTAT
TTGATTTGACATTATGGCTTACCAAAACGCTACTGCTTCGCTGCGATACC
TGCTACGATACGTTCCCACGCTGACTTACGGCGGTGACCCCATTCTCGAC
TCCCCCCTAATTCACTCTCGTGTTGGGTCTAAGATGAAGGTGCTGACAGG
TTTGCGCAGTCAGGCAGTAAGCAGTAAGCAGCGGTTTTTCCTTTCGTGGC
CACAAACATGCCGCTCGCCATCTGTATCCAGGATCATTCTCGTACAGCAC
TGCTGTCCTGTTAGTGTTGCAAGATCGTGTCTTCGTCCAATTCTTGCACA
AAAGAGGATCACCTTTTAGCACGAAAGCGTGAAGTGTTTGTTTCTCTTCC
CTTTCTGCATCGCAGTCGTGATGGATATCGATCTCGTCGGCATCAGGGAA
TCGGGGTATCACGCAATCTTACCCAACCGCTGTCCATACAGTGCAATCGA
AAACGCCTTATCGGGAATGAAATCTGGATGAAGCACGTGCTGGTCGACTC
TCCACTACTATCATATGGCACGTGTGTCTTCGTGCATCCTGCCTTACACG
GGAAAATCCAGTCCAAAACTACACTCAACATTCGACTGATTTTTGTACTC
TAATGTTCGACTCCATCGACTCTATACATACGTACTCAACCCGGAGCACT
GCTGTGAAATGATATTTTCCCCTAAACGTCCCATCAAATTCCGGCACCTC
ATTATTCCTCCACATAATACAAGTAACCCGATGGGTCCACCTCGTAACCA
TCCGCCACGATTTATTTTGCACACCACCAGCGGTACTACCAGAGGACCCG
AAACCAAGCACACACCTTTACGGCACGGCGGCATTAAAGGTGTTTCCTAA
CGGATACGGCCTGAAAACTGCCCGTCCACTCGGGAATACTCGTTTCAAAA
CCAAACCACTTTTGGAAGTTGTCTCAATCTCATTCCAGTCGACCTCTCCA
CAGTACAGTACTCGTACCAGGTGCTATTCGTTCGACCCTTCTTACAGTTC
ATTCACAATACGCTGGTTAATCCGCTTCATTAAACGGCCCGCTTAAATCC
CGAAACCCAATGCGTGTGTACATGACCCGATAATTCTCGCCTCACAACGT
CGCAAGGCTCCGCCGACATCAGTTTGTTCAACGGGAACCTCCCACCAACT
CGGAGCGGTTGACGGAGAATATTACACTCATCCAGCAGTACACCAGTGAA
ACAGTTCCGAAAATATCATCACATACACCACACACCCAGCAGGTACACCT
ATGATTCAATCCAATCAAAATATTATACTTCAAGTGTATGCCACAAAATG
CCTCGGTTGTCGTCGTTCCCCGGCAATCTCTACCGCGTTTTCCCCACAAA
CACATGTGGATCATGTTAAACACGTCATAGTCAAATCCAACTCGCGTAGA
CACACATGTGAATCAATTCCAACAGGTTATTTATCACCAGGCGGTATACT
TCTCAGCTAATTACATTATCGATGCAGTGGTATCAAAAACTGCTGTATCG
TACTTGGAAGTATAATATGTAGGCCCTAATATGTATCCGACGCGTCTGTG
CTTTCAGGTACAATATGTAAATCCAACAATAAGTTCGTTTCATTTGATTT
GTACCCAAACATCGTGACAAATCCAACGAACTTGCTGCACATCACGTTGT
TGCTGCGATCATACCGGCCGCTTCTCCAGGATACGAGCCCGACGATGGAC
TGCCCGACCTGTCACGTGTCAGTTCCAAGAAACGACTTCCGGCGTTGCGT
CGTGCTTGACCAGGTAAACTAGTACTCGGCTACCCCAAGTCGGCAGTCTG
TGTAGAGTGTTGGTTGTCGAGCACCATCATATGGATCGTCGCACTCGTAC
GTACGGCGCTGCTTTTTGTGTCGACAGGGGGTGGCCGTGCTCGTGTAAAT
GTTTTGTTCATGAGCCCGACGCTCCAGCTCTCACCGCGGTAGGAATCCAG
GGTTTTTTACCGGGTCAATCGGCGTAAAAGCGACACGTTTTTCAGTGACG
GAAGAGAAAGTGTGCCGCACATCATGAGACTGTCTGCACCCGAAAACTTT
CCCAACACCCACTGGAGAGGTTGTTTCCTGCGGTGGGAAGGCTAGATCGT
CCAGCAAGTGCTTCCGTCGGTCCTGCCGGCTTACTCCTGTTTTGTGCGTG
GCTCCTGCAAGAGAAAACCCGTGCAGCTCCTGTGTTGCGATATGCACCGC
TTTGTCACTCTTGCCTTGTCTTGCGCTGTGTCGTAAGGCAGCAGGAGACG
ACAATGCTCCCACATTCAATCTCCTTCTATGATAACATTTTTTCATTTCC
CTTACCCTCTCCATCGTTGCGACCCCTCCCCGCTTCCTCGGCAAACGAAC
GCCCACTCAAGGTGGTAGACCGGGCCGTTCTAGCCGCCGGTATGGACGAC
GACGAGTGGCGGGCCAGACTGCAGCGAGGGCAACAGCTGGCGAGAGAAGC
GGAGTCAAACAGGCGTGACTCCAGGGATAACCAGCGCTCCGCAGAGGACA
CGATCGCGAAGCAGGCTGCGGAGCTAGAGAAGCTTCGGAAGGAGGCCAAG
TCGCGCGTGCTCGAACGGCGATCTGTGCGTTCCTACGAAGTGAGTCGTTT
TTTTCGGTACGGCGTTAGGGCTGCCGGTTAGTCGTGTCCCGTTCTTTTGC
TCCTTGTGGCCGTAAAGGTGTCGCTGGCACGGATCGAGTTATGGTGCGAT
CGATGCACACCGCGATGAAAGACATGTGCCCCTGGGGAAAGAGGGTAGGT
ATTACTTTCTAGCTCGTCGTATGATCATGATTTTTGTTTTGACGGTCTCT
ATCTGCGTATGCTCGTGCTCAGCTTAAGCAGCAGGGTGGTCGGTGTTGTG
GCAAAGAATGGTGGGTTGACTAAAATCGCTGTGCGCGAGTGCATGGTGTG
TGATCGCACCGCGCGTTGGTGTGCGGTGTGTTTGCTGTATTTTCCTAGTT
TACGGACACTCTCTCGCATCCGATTCTGAATCTTCTACTTTGTATCATAC
AACACAGTCATGAAAACTCATTTCGACCCGAGCTCGTGCTCCAAAGCTTT
CCTTGCATTCACTCTCATGTTGATCTTGAGCCATCCATACACTGCTGTTT
CAATAAGCCATGCTTGGTGTTGTCGCTTTTAGTCCCATCACCGAAGCGAC
GCCCCGGCTGACTTGTTGATCCTCCACCCTCCGACATAAAACTAAAACAA
ACAGCAGGGCTTCCCGCCGTCCATGGCGGACTACGGCTTCCGCTTGATGG
GAGGCGGCGCCCGCGATGTACTCGACCCGGCATCCCATAAGTCGGCCATA
GAGGAAATCACGCGCTTTCGTCATCGCAGGGCGGAGGCCGGCGAGCCTGA
ATCGTCATCGCGTGATGCCCGGGCCTCCGGTGACGCGGCCGTCGTCGCCG
CCGCCGCCCTCGGCATGCCGCCGTCGGCGGCTTACGGGGGCGCGCGGCCG
AGAGGTCCCACCCACCCCGGCTTCGGGCCGGCCGAGGGGGACCCTTGGTT
TTCTCTGAGATCCAGCCAGCCGGGCAGGTACCCGAGCGTTGCCATGTCAG
CGGGGCGGATGGGCCGTGAGATGTTGGGGAGGACCCACGGCTTGAGCAGG
AGGTGGGTGCGTTCGTGAGACCGGGGTGGGTGTGCTTTTTCGTGCCACGC
GCTTGGCTTTACCGAGCAAACAGTTGCTCATGGGTTTTTGCCTGAATCAA
TCCGCGGAGGTGAAACAGCACGGAAGGGCGGAGCTCCACCCCCAGATGAC
GTTTTTTTTTTTCTTCTGCGTTTGTTTGGAGCCGTGACCGGATATTTCAC
AAACGCCGTTCTGGTCAAAACGCGAATAGGCTGCAATAGAGAGTTGGCTG
TCACACGAGCAGGTTAGGCGGCCGCGAATGTTGTTGGTTCTCGCTCCCGA
AACCGAAGCTGACCCCAACAGCGACGAACAGACACACGGGCGCGTTTTGC
AAGTGTTTCCAACACCGAGGCTTCTCGTGCACTTTTGCATCGCCCAACCT
CTATGACGACCCTCCTCGTGGTACGATACGACTGTGCCCCCGTTTTTCTA
GGGCACCGCCGGCGACCAAAAAAAAAAAAAATCACATCTTGTCTTGGACC
CAAGTCTGACACCCCCCGATCATGCCGGCCCACCTTTCCGTCTCGCCTTT
GTCGCCTACTCTTGCCACGAGCAGCGCCGGAAACTCAGCTGCGGGGATGG
GGCTCGTGCACCCTCATCTTCCGGGGTCGGCGTTAAAATCCTCCCGCGAA
CTTGCGAGCGGTGGCTCTAACTGGCGCTCGGCGTACCTCGAGGAGGATCG
CTTGTTGTCGTCAGGGGCAGGGGGCGCTCGCACTCTCCACCACCTAAGTG
TGGGCTCCCGAGGAAGCCCAGTAGGACACGTCCGTGGGGGAGCTGCCCTG
GAGAGGGGCCCGCCGGTGACGAGGAGGGGGGATCCGACCGCGCACGCCTC
TTCTTCGGCCTGCTTCAGCAGCAAGAGGTTTGGCATCTCCAGCGGCGCGG
GGAGCGGGGGCGCATTCGGAGGTGTCGGTGCTGCCCCGAGCGCCTCTTCG
TCGTCGCACCCTTTGGTGGGTGGGGTGGGAGGGGGAGGGGGAGGGGGAGG
GGGCTCGTCTCCTTCGCCTAGCCCTCAGCGGTTCGACGGCTTTGGCGGGC
AGGGCCAACGCGAGCATTCCTCGAGAGGTGGCGGTGGCGGCGGTGGCGTG
GGGCACTTCGTCAGCCGCGGCCGCGGGAACGGGAGGGCGGAACAACCGAC
ACCGGCGCTCGACTTGGAGGAACTCATGTCAGGCCAAGACGACCCCGGCT
CTCGGTCGGAGTGGGACGATGTGCTGGCGTCCATCTCCATGCCCCACGTG
GGTGCGGACCGCGGGATGGGGCGTTCGGAGGAGCCTCCCGGCACAACCCG
CGGGTGAAACGGCCGATTCAATCCGATTCGCCGCCAAGCACGTTTTTTTG
GCGCGGCGGGGATGAGCGATTGTTGCTTACAGCTATCAATCAATCAATCA
ATCAATCAATACCTGTGATCGATTGATCACAATCTATCAGTTGATGAATC
ATCATGGTTGCGGGGTGCCTTAGCTGCAGGGCAGCCTTTTCTGTTTTAGC
GGTTCGCTTTTTTCGCAGCAGCAGCATCAGCAGCAGCAGCATGTGCACGC
CATCACTCAAGCTTAAGATACCACAGATACATTCTTCTTTTTCTTTTCAT
TCTGTGGTGCGTTGGAGCTGCTCGTGGTTCCACCTCAGCGGAAACGACGA
GGCGACACGTTGTTGCAGAGGAATGATAGCTTCTCCGAATGCAATTGCTA
GGCATTCCATAGGCTCATACGGTGACAAAGAGATTCGAGGAGTAGTAGGG
GGGCGCACTGACGAAGGTCACGTCATGGTGTCTAGGATGATTGCCCCTAA
TCCTTACACCTTATATATATAATGAAAAATGGGGGGTCATGGGGCTGCGC
CACGATTACTCAAAACATATAAATCGTTTCATTTTATGGGAAAATAAATA
TCTGTCACGTTTTTTGGGTTGACTAACGTCCCCCGGGCGGCCGTAGAGCC
ACCTCAACGCTGTCACGTTCTTCCTCGCCGTGGTTTGGGGTCTGTAATTC
CTTGTCGTTATGTAGCGGGTGGCCTCCGTTTTCTCCCAACGAAGGAACTA
CCAAGGGTCCCCTCCCCGTGTCTCTCTCGAAACGAGGTTTGATTGTAGTT
CCTTTTTTGCGTGGTGTGTTTTGGTCAGAGTGATGTAGAGAATACTTCGA
AGAATTGTTTAAAAGTGACAAAAGAACAGCAGTACCGTGCGCTGTGAGTC
ACTTCGCGTCGGAAGGGTGTTATTTATTTGCTGTCCTGTTTTCGGCACTG
GTGTGAGGCGGGTCTAATTATGGTTGAGCTGCAGCATATTCACGGAGGAC
GTGATGAAAAGAACGGACACGATGATCCGGCATCGGTACAGCACCGGCAT
TGGTGTCGATCGGCATCAAAATGATGCTGCCGTACGCTGGCAAAGGATTG
GTTTGTCAGCGAGACACGCGCGCGGCGTATGGATGCACTGGATGGAGGGC
GAGGACACAGCATCGAGAGGGGATGGAACCCTCGCGAAGGCAAAACGTTA
TTTGCTTTTCATGTAGTCCACATCCATGCACACAACGCGCGGAGAGTCTG
CCGCGGCATAGGACGCGTGTACCCAGGTGAAAACCGTGCACTACGTTGAA
GCATATTTGTTGGGAAAAAATGAGCAATCGGGAGGGGTGGGGGTAAGGCT
TCTAGGTGCCCTGCTGGCAGGGATTGAAAAAAACTTGCCGGTCGGTAACT
CTGACGCTTGTCGTTTTGTTTTTAGGTGCATGCATTCATTTCATGTTTCA
TATGAGGGGTCAAGGTACCTCCGGGTCACGCTCGTGTGTTCTGGTTGGTT
GGTCTGAGTTTGGGTGTAGGATTCGGCTGTACTTGTAGAAATGTTGAAAC
TAAGAATTGATTTTTTTAAAAGACGATTTTTTATTTTTGCGCCTTGATGG
AATACCTGGATGGTACTTGTAACTAACTTCGATTAGTGGATCGTCCTGCG
TCACCCCCGGACATATCACGGAGACTGCAAGAGAGACTACGTGTTGACTG
CCATGGAGAGGAGATAGGACGGTCACGATGTACGGACAAAGATCCAAGTA
AGGCCCTTTCTAATCATTCCGGATTTTTGCCGGGAAACAGAGAACCATTC
CCGGGAAACATGAACTGAGTTTCGCTCTGTTCTAAACGATTGGGCGAGTA
T

Coding sequence (CDS) from alignment at P-littoralis_Contig616:72100..83850+

>mRNA_P-littoralis_Contig616.18.1 ID=mRNA_P-littoralis_Contig616.18.1|Name=mRNA_P-littoralis_Contig616.18.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2616bp|location=Sequence derived from alignment at P-littoralis_Contig616:72100..83850+ (Pylaiella littoralis U1_48)
ATGGAGGAAATGTTTGCCCTATTCGGAGCAGGCGACGATGACGATGACGA
TGATGTCGAGGGACAAGCGGCTTACGGCGGCAACGGAGGAACAGGTCTAG
ACATGGTGGGAGAAGTTCAGGTGGAGGAAGAGGTTGGGGAGGAGGAGGAG
GAGGAGAACGAGGACGAGGAAGATGCAGAAGATGCAGACCTTGAGCTCTC
CGAACTCGAACTCCGCCCCTTGAAACGGTCTCGCTCTTCCCGAGGTGGAA
TATCTCAAGGCGCTCTTCTATTCGGCGGCGATGATGGGCGCAGAAGCGGC
AGCACGGGCCGCGGGCAGGTGGTAGGTGGTCATGGAGAGCAAGAGGTGAT
CGAGATTTTCTCGGACGATGATGAGGCCCAGCAGCAGCAGGAGCAGCAGC
AGCAGCTTCTTTCTGGATTCCATTCGGACCCAGTCCGACCGGGGCGACAC
TCCGTGGAAAGTTGTCCAGGTCGTCAGCGCCAGCACAACAGATCACCCGC
AGCAGCCTCGGAAGGATCATCATCATCATCATCAGCAGCAGCAGCAGCAA
CAGGAGCAGGAGCTCGATCGAGCCGGCACAGCGTTAGATGCGCGGATCAG
CAGGGTGGCCCCAAGGGCTACCACCCCTCCGCAGCCCCCGGTAGGCTGAT
GACGCTTCGAATGGCGGCTGGAGGCAGCACTGCCGGGTCCCACAAACCCG
CTGGTGCTTCCTCAGCCGCTGCCGGTGTTTCAGCCTCCAATAGCCATAGT
AGTGTCGTGGTTCAGTCATGGATTTCATCATCCGTTTTGGGCGTAAGCGA
GGAAGGAGAGGAGGGAAAACGTTCGGAGGAGGGCAAGGCTTCTCGTGAGG
CTGGACAAGCTGATGCTGATAGATCTGGGTGGCTGGGAGCCGCAGTGTTG
ACGACAACGAATGCTGGAGCAACATCGAATATCCACCAAGCGACTGGTGA
CGATGAAGAAAGTTTCGCAACAACCATGAGCAGCGATCAAGCCGGCCCAC
TGAGCGGCAGCGCGACCCCAGGAACAACAGCGGCAGCAGCAGCAGCAGCA
GCAGCAGCAGAATTCCCCCTTAACTTGGAATGTGCCATGTGCTTCAATCC
TCTGGCCGTTGCGGCGCTCTTCGCCTGTGGCCACGGGTCCTGCTGGGAGT
GCGCGCACGACTGGTGTTCGAGGGATACGAGCCCGACGATGGACTGCCCG
ACCTGTCACGTGTCAGTTCCAAGAAACGACTTCCGGCGTTGCGTCGTGCT
TGACCAGGTGGTAGACCGGGCCGTTCTAGCCGCCGGTATGGACGACGACG
AGTGGCGGGCCAGACTGCAGCGAGGGCAACAGCTGGCGAGAGAAGCGGAG
TCAAACAGGCGTGACTCCAGGGATAACCAGCGCTCCGCAGAGGACACGAT
CGCGAAGCAGGCTGCGGAGCTAGAGAAGCTTCGGAAGGAGGCCAAGTCGC
GCGTGCTCGAACGGCGATCTGTGCGTTCCTACGAACAGGGCTTCCCGCCG
TCCATGGCGGACTACGGCTTCCGCTTGATGGGAGGCGGCGCCCGCGATGT
ACTCGACCCGGCATCCCATAAGTCGGCCATAGAGGAAATCACGCGCTTTC
GTCATCGCAGGGCGGAGGCCGGCGAGCCTGAATCGTCATCGCGTGATGCC
CGGGCCTCCGGTGACGCGGCCGTCGTCGCCGCCGCCGCCCTCGGCATGCC
GCCGTCGGCGGCTTACGGGGGCGCGCGGCCGAGAGGTCCCACCCACCCCG
GCTTCGGGCCGGCCGAGGGGGACCCTTGGTTTTCTCTGAGATCCAGCCAG
CCGGGCAGGTACCCGAGCGTTGCCATGTCAGCGGGGCGGATGGGCCGTGA
GATGTTGGGGAGGACCCACGGCTTGAGCAGGAGCGCCGGAAACTCAGCTG
CGGGGATGGGGCTCGTGCACCCTCATCTTCCGGGGTCGGCGTTAAAATCC
TCCCGCGAACTTGCGAGCGGTGGCTCTAACTGGCGCTCGGCGTACCTCGA
GGAGGATCGCTTGTTGTCGTCAGGGGCAGGGGGCGCTCGCACTCTCCACC
ACCTAAGTGTGGGCTCCCGAGGAAGCCCAGTAGGACACGTCCGTGGGGGA
GCTGCCCTGGAGAGGGGCCCGCCGGTGACGAGGAGGGGGGATCCGACCGC
GCACGCCTCTTCTTCGGCCTGCTTCAGCAGCAAGAGGTTTGGCATCTCCA
GCGGCGCGGGGAGCGGGGGCGCATTCGGAGGTGTCGGTGCTGCCCCGAGC
GCCTCTTCGTCGTCGCACCCTTTGGTGGGTGGGGTGGGAGGGGGAGGGGG
AGGGGGAGGGGGCTCGTCTCCTTCGCCTAGCCCTCAGCGGTTCGACGGCT
TTGGCGGGCAGGGCCAACGCGAGCATTCCTCGAGAGGTGGCGGTGGCGGC
GGTGGCGTGGGGCACTTCGTCAGCCGCGGCCGCGGGAACGGGAGGGCGGA
ACAACCGACACCGGCGCTCGACTTGGAGGAACTCATGTCAGGCCAAGACG
ACCCCGGCTCTCGGTCGGAGTGGGACGATGTGCTGGCGTCCATCTCCATG
CCCCACGTGGGTGCGGACCGCGGGATGGGGCGTTCGGAGGAGCCTCCCGG
CACAACCCGCGGGTGA