mRNA_P-littoralis_Contig616.8.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig616.8.1 vs. uniprot
Match: A0A6H5L731_9PHAE (Glyco_trans_2-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L731_9PHAE) HSP 1 Score: 505 bits (1300), Expect = 2.280e-169 Identity = 255/353 (72.24%), Postives = 277/353 (78.47%), Query Frame = 2
Query: 116 MWEALVFGVVLATSFGYWGLKREQLGPKLTPNSECHVGDGFVSVVVPAYNEGDGVKLTLANIDEMAQFRGTGGLLCPLVWRASPNTVPRVSAKLTGFQDKSRVEIIVVDAGCKDHTMDAVASMKLGVKLSTTTSQGGRGPAMNAGARLARGELFLFVHADTIVPLGFDETLRKAFRDPEILMSTFLFGINRALLQGKEPFGMAVMERVTNYRTRTIHLPYGDQA---FCFTAHKFAEMGGFPDIVMMEDFEVVRLLRKEELAGGGHIHVLDEAALCSPRRWEKPGNNPFVNFWRNWVFLFLYSRLGFTATQIFRLYYGRHPDPIVEPADKNVTQGTGTTASAAKGTTLPAYSH 1165
MW+ LV G+ +A YWGL+R + GP+L PN+ECHVG+GFVSVVVPAYNEGDGVKLTLA IDE+AQ DKS VEIIVVDAGCKDHTMDAVASMKL VKLSTTTS GGRGPA+NAGAR+A+G+L LFVHADTIVP FD TLRKAFRDPEILMSTFLFGINRALL+GKEPFGMAVMERVTNYRTR IHLPYGDQA FCFTAHKFAEMGGFPDIVMMEDFEVVR LRKEELAGGGHIHVLDEAALC+PRRWE+PGNNPFVNFWRNW+FLFLYS+LGF+ QIFRLYYGR PDPIV D + S + G TL + H
Sbjct: 1 MWDTLVCGISIAGILAYWGLRRAEAGPRLVPNTECHVGEGFVSVVVPAYNEGDGVKLTLATIDELAQ-------------------------------DKSLVEIIVVDAGCKDHTMDAVASMKLDVKLSTTTSVGGRGPALNAGARMAKGDLLLFVHADTIVPPAFDVTLRKAFRDPEILMSTFLFGINRALLRGKEPFGMAVMERVTNYRTRVIHLPYGDQASRAFCFTAHKFAEMGGFPDIVMMEDFEVVRRLRKEELAGGGHIHVLDEAALCNPRRWEQPGNNPFVNFWRNWMFLFLYSKLGFSPEQIFRLYYGRDPDPIVVADDSHSLD------SGSGGKTLDDHVH 316
BLAST of mRNA_P-littoralis_Contig616.8.1 vs. uniprot
Match: D7FSW3_ECTSI (Glycosyl transferase, group 2 family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSW3_ECTSI) HSP 1 Score: 275 bits (703), Expect = 2.870e-83 Identity = 137/169 (81.07%), Postives = 146/169 (86.39%), Query Frame = 2
Query: 557 LARGELFLFVHADTIVPLGFDETLRKAFRDPEILMSTFLFGINRALLQGKEPFGMAVMERVTNYRTRTIHLPYGDQAFCFTAHKFAEMGGFPDIVMMEDFEVVRLLRKEELAGGGHIHVLDEAALCSPRRWEKPGNNPFVNFWRNWVFLFLYSRLGFTATQIFRLYYGR 1063
+A+G+L LFVHADTIVP FD TLRKAFRDP+ILMSTFLFGINRALL+GKEPFGMAVMERVTNYRTR IHLPYGDQAFCFTAHKFAEMGGFPDIVMMEDFEVVR LRKEELAGGGHIHVLDEAALC+PRRWEK G F + +N F LY +A QIFRLYYGR
Sbjct: 1 MAKGDLLLFVHADTIVPPAFDVTLRKAFRDPKILMSTFLFGINRALLRGKEPFGMAVMERVTNYRTRVIHLPYGDQAFCFTAHKFAEMGGFPDIVMMEDFEVVRRLRKEELAGGGHIHVLDEAALCNPRRWEKQG--VFRSSLQNICFALLYVVGNLSADQIFRLYYGR 167
BLAST of mRNA_P-littoralis_Contig616.8.1 vs. uniprot
Match: A0A835ZCJ3_9STRA (Nucleotide-diphospho-sugar transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCJ3_9STRA) HSP 1 Score: 200 bits (508), Expect = 6.520e-54 Identity = 116/302 (38.41%), Postives = 162/302 (53.64%), Query Frame = 2
Query: 200 LTPNSECHVG-DGFVSVVVPAYNEGDGVKLTLANIDEMAQFRGTGGLLCPLVWRASPNTVPRVSAKLTGFQDKSRVEIIVVDAGCKDHTMDAVAS--MKLGVKLSTTTSQGGRGPAMNAGARLARGELFLFVHADTIVPLGFDETLRKAFRDPEILMSTFLFGINRALLQGKEPF----------GMAVMERVTNYRTRTIHLPYGDQAFCFTAHKFAEMGGFPDIVMMEDFEVVRLLRKEELAGGGHIHVLDEAALCSPRRWEKPG--NNPFVNFWRNWVFLFLYSRLGFTATQIFRLYYG 1060
+TP S +G DG ++V++PAYNEG G+ TLA + + G VE+++VD GC D TM + ++L + T S+GGRGPA++AGA+ ARG+L LF+HADT++P G+D LR AF+DP +L+S F FG+NRA+ + G+ ++E + RTR PYGDQA C + + +GGFP + MMEDFE VR + GG I L ALCSPRRWE+ G +NF F+F Y LG++ QI+ YYG
Sbjct: 37 ITPGSGPQIGKDGLITVIIPAYNEGAGIADTLAALSAATEATGL-------------------------------VEVVIVDGGCSDDTMAQARAVPLRLAHGIRTLESRGGRGPALHAGAQAARGDLLLFLHADTLLPQGYDAALRDAFQDPALLLSCFRFGVNRAVCAARGAXXXXXXXXXXRGLRLLEWAVDRRTRAKSFPYGDQALCTSRVNYFRLGGFPRVPMMEDFEFVRRAKAVAQGGGWGIRQLPLTALCSPRRWEQKGVLTVSLLNF----SFVFRYVVLGWSPQQIYDRYYG 303
BLAST of mRNA_P-littoralis_Contig616.8.1 vs. uniprot
Match: A0A0M0JLK4_9EUKA (Glycosyl transferase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JLK4_9EUKA) HSP 1 Score: 186 bits (473), Expect = 6.860e-49 Identity = 118/321 (36.76%), Postives = 156/321 (48.60%), Query Frame = 2
Query: 146 LATSFGYWGLKREQLGPKLTPNSECHVGDGFVSVVVPAYNEGDGVKLTLANIDEMAQFRGTGGLLCPLVWRASPNTVPRVSAKLTGFQDKSRVEIIVVDAGCKDHTMDAVASMKLGVKLS--TTTSQGGRGPAMNAGARLARGELFLFVHADTIVPLGFDETLRKAFRDPEILMSTFLFGINRALLQGKE--PFGMAVMERVTNYRTRTIHLPYGDQAFCFTAHKFAEMGGFPDIVMMEDFEVVRLLRKEELAGGGHIHVLDEAALCSPRRWEKP------GNNPFVNFWRNWVFLFLYSRLGFTATQIFRLYYGRHPDPI 1078
L F W LKRE L + + +SVVVPA+NE + + L ++ A RV+++VVDAGCKD TM V + K+S TTTS GGRGPA+ AG RL+ G+ L +HADT +P +D + +A DP +LM+ F FG +RA L E P G+A+ME N R+R LP+GDQA T +GG+P+ ++E+F +V LR AG G I LD ALCSPRRWE+ N V W W G T Q+F YYG P P+
Sbjct: 47 LLRRFRGWRLKRESLIKGRSSSEPLRTALQTISVVVPAFNEARSIGMCLETLERHAS-------------------------------SLKRVQVVVVDAGCKDDTMAIVTAWAAQTKVSVLTTTSSGGRGPAVAAGTRLSVGDAILVLHADTALPANWDGAVLEALADPTVLMTAFSFGCDRAQLSCPESPPAGLALMEWTVNRRSRWYELPFGDQALATTRATLDAIGGYPETCILEEFILVNRLRAMSAAGLGRILTLDATALCSPRRWERSTVWRINAVNQAVMLWHRW---------GATPAQVFEFYYGM-PAPV 326
BLAST of mRNA_P-littoralis_Contig616.8.1 vs. uniprot
Match: A0A7S3PIZ7_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PIZ7_9STRA) HSP 1 Score: 177 bits (450), Expect = 6.610e-46 Identity = 112/297 (37.71%), Postives = 148/297 (49.83%), Query Frame = 2
Query: 179 REQLGPKLTPNSEC-HVGDGFVSVVVPAYNEGDGVKLTLANIDEMAQFRGTGGLLCPLVWRASPNTVPRVSAKLTGFQDKSRVEIIVVDAGCKDHTMDAVASMKLGVKLSTTTSQGGRGPAMNAGARLARGELFLFVHADTIVPLGFDETLRKAFRDPEILMSTFLFGINRALLQGKEPF---GMAVMERVTNYRTRTIHLPYGDQAFCFTAHKFAEMGGFPDIVMMEDFEVVRLLRKEELAGGGHIHVLDEAALCSPRRWEKPGNNPFVNFWRNWVFLFLYSRLGFTATQIFRLYY 1057
R LGP E H VSVV+P YNEG + + N++ + Q T G KS E+IVVDAGC D TM+A+ + + + S+ GRG A++AGA A G++ LF+HADT++P G+DE LR D ++LM+ F F IN + G+ +E TN R R LPYGDQA + E+GG + MMEDFE+V +R+ L GG I +L E A CSPRRWEK N N NW F+ Y G + IF YY
Sbjct: 53 RLTLGPDEDEMEEILHTSVSKVSVVIPVYNEG--AENLIQNLERLDQ--STLG--------------------------KSCTEVIVVDAGCSDDTMEALVKADMRIPVRVLRSKHGRGQALSAGAESATGDILLFLHADTLLPTGYDEVLRNKLADKKVLMTAFSFEINVENAEDSTASFRNGIKRLEYFTNIRARNFWLPYGDQALAMRRSAYKEVGGVKRLKMMEDFELVSRVRRIALENGGRIEILPEHAKCSPRRWEK--NGIAKNSVLNWTFVAAYVWAGISPDTIFEYYY 317
BLAST of mRNA_P-littoralis_Contig616.8.1 vs. uniprot
Match: A0A7S2RVS7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RVS7_9STRA) HSP 1 Score: 171 bits (434), Expect = 2.890e-43 Identity = 110/306 (35.95%), Postives = 153/306 (50.00%), Query Frame = 2
Query: 179 REQLGPKLTPN-SECHVGDGFVSVVVPAYNEGDGVKLTLANIDEMAQFRGTGGLLCPLVWRASPNTVPRVSAKLTGFQDKSRVEIIVVDAGCKDHTMDAVASMKL-------GVKLSTTT-SQGGRGPAMNAGARLARGELFLFVHADTIVPLGFDETLRKAFRDPEILMSTFLFGINRALLQGKEPFGMAVMERVTNYRTRTIHLPYGDQAFCFTAHKFAEMGGFPDIVMMEDFEVVRLLRKEELAGGGHIHVLDEAALCSPRRWEKPGNNPFVNFWRNWVFLFLYSRLGFTATQIFRLYYGRHP 1069
R + P + P S + VSV++PAY E ++ TL I+ V+A RVE+IVVDAG D TMD V + G+ + T ++GGRGP +NAG R +RG + LF+HADT++P FD +R+A D E+L + F F ++RA + + ME + R+ LP+GDQA T +F +GGFPD+ MMEDFE+V+ LR+ AG G+I LD A C RRW K N + N V + Y GF+ TQI+ YY P
Sbjct: 35 RHRRHPGVPPGLSPLQPHNNLVSVIIPAYREATTIEATLRRIEHT------------------------VAAS-------DRVEVIVVDAGGNDGTMDIVRRVSAEINEQATGLSIRTDVWARGGRGPTLNAGVRASRGGILLFLHADTLLPDCFDALVRRALEDHEVLATAFRFRVSRA--EDTRVAALGWMEWTVHLRSSLYELPFGDQAMAITRQRFDALGGFPDVPMMEDFELVQALRRAGAAGAGYIKTLDAPATCGARRWVK--NKVWWCNAMNQVIMIAYVYFGFSPTQIYTWYYQSTP 305
BLAST of mRNA_P-littoralis_Contig616.8.1 vs. uniprot
Match: F0Y8A2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8A2_AURAN) HSP 1 Score: 164 bits (416), Expect = 1.570e-41 Identity = 118/331 (35.65%), Postives = 157/331 (47.43%), Query Frame = 2
Query: 140 VVLATSFGYWGLKREQLGPKLTPNSECHV-GDGFVSVVVPAYNEGDGVKLTLANIDEMAQFRGTGGLLCPLVWRASPNTVPRVSAKLTGFQDKSRVEIIVVDAGCKDHTMDAVASMKLGVKLSTT-------TSQGGRGPAMNAGARLARGELFLFVHADTIVPLGFDETLRKAFRDPEILMSTFLFGINRALLQG--KEPFG----------MAVMERVTNYRTRTIHLPYGDQAFCFTAHKFAEMGGFPDIV---MMEDFEVVRLLRKEELAGGGHIHVLDEAALCSPRRW-EKPGNNPFVNFWRNWVFLFLYSRLGFTATQIFRLYYG 1060
+++ SFGYW L TP + + GD +SVV+PAY E ++ TL + L+ D RVE++VVDAG D TM A+ + L+ T +S+GGRGPA+ AGAR ARG L +H DT +P GFD + A RDP+ L + F FG++R L G K P G AVME R+R + LP+GDQA F +GGF D+ ++EDF +V LR G G I L A C PRRW KP VN W N + L++ G+T I+ LYYG
Sbjct: 1 MLVQVSFGYWRLCARARRAAATPVAAAPLPGDALLSVVIPAYREAATIEATLRRV-------------------------------LSAAADPRRVEVVVVDAGGGDGTM--AAARAVAADLAPTLRVDCAPSSRGGRGPAVAAGARAARGAALLVLHGDTRLPSGFDADVLAALRDPKTLATCFRFGVDRLALDGALKSPRGSLLRRLQELPFAVMEATVALRSRVLQLPFGDQALALRRDTFEALGGFDDLAKLPILEDFLLVHKLRVAGARGFGTIANLSTTAHCHPRRWLAKPVWR--VN-WTNQRVMVLFTYFGYTPLDIYELYYG 295
BLAST of mRNA_P-littoralis_Contig616.8.1 vs. uniprot
Match: A0A7S2CQU7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CQU7_9STRA) HSP 1 Score: 157 bits (398), Expect = 7.030e-39 Identity = 102/289 (35.29%), Postives = 141/289 (48.79%), Query Frame = 2
Query: 227 GDGFVSVVVPAYNEGDGVKLTLANIDEMAQFRGTGGLLCPLVWRASPNTVPRVSAKLTGFQDKSRVEIIVVDAGCKDHTMDAVASMK----LGVKLSTTT----SQGGRGPAMNAGARLARGELFLFVHADTIVPLGFDETLRKAFRDPEILMSTFLFGINRALLQGKEPFGMAVMERVTNYRTRTIHLPYGDQAFCFTAHKFAEMGGFPDIVMMEDFEVVRLLRKEELAGGGHIHVLDEAALCSPRRWEKPGNNPFVNFWR----NWVFLFLYSRLGFTATQIFRLYY 1057
G G +S+++PAY E D + L +++ + PN V E+IVVDAG D TM+ V G+ L T S+GGRG + AG ++G++ LF+HADT+V GFD LR +L + F FG+NR + G+A ME N R+ + LP+GDQA T + +GG PD+ +MEDFE+V+ LR+ AG G I LD LCS RRW++ G WR N V + Y GFT QI+ YY
Sbjct: 58 GPGHISIIIPAYKEVDTIGACLQRLNDCI---------------SEPNLV----------------EVIVVDAGGGDGTMEKVREAAEGSLSGLTLRTANLPHDSKGGRGATLIAGVAASKGDIILFLHADTVVLPGFDGLLRSELAKDSVLATAFSFGVNRDSVVAPIA-GLAWMEWTVNIRSSILELPFGDQAIAMTRQRLDAVGGVPDVPIMEDFELVQKLRRIGAAGSGRIKTLDAKVLCSGRRWQEKG------VWRTNLLNQVIMTAYVYFGFTPAQIYSWYY 308
BLAST of mRNA_P-littoralis_Contig616.8.1 vs. uniprot
Match: D7FSW2_ECTSI (Glycosyl transferase, family 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSW2_ECTSI) HSP 1 Score: 147 bits (371), Expect = 1.010e-37 Identity = 77/130 (59.23%), Postives = 86/130 (66.15%), Query Frame = 2
Query: 116 MWEALVFGVVLATSFGYWGLKREQLGPKLTPNSECHVGDGFVSVVVPAYNEGDGVKLTLANIDEMAQFRGTGGLLCPLVWRASPNTVPRVSAKLTGFQDKSRVEIIVVDAGCKDHTMDAVASMKLGVKLS 505
MW+ LV G+ +A YWGL+R + GP+L PN+ECHVG+GFVSVVVPAYNEGDGVKLTLA IDE+AQ DKS VEIIVVDAGCKDHTMDAVASMKL VKLS
Sbjct: 1 MWDTLVCGISIAGILAYWGLRRAEAGPRLVPNAECHVGEGFVSVVVPAYNEGDGVKLTLATIDELAQ-------------------------------DKSLVEIIVVDAGCKDHTMDAVASMKLDVKLS 99
BLAST of mRNA_P-littoralis_Contig616.8.1 vs. uniprot
Match: A0A7S2RB68_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RB68_9STRA) HSP 1 Score: 144 bits (362), Expect = 2.910e-34 Identity = 98/283 (34.63%), Postives = 132/283 (46.64%), Query Frame = 2
Query: 203 TPNSECHVGDGFVSVVVPAYNEGDGVKLTLANIDEMAQFRGTGGLLCPLVWRASPNTVPRVSAKLTGFQDKSRVEIIVVDAGCKDHTMDAVASMKLGVKLSTTTSQGGRGPAMNAGARLARGELFLFVHADTIVPLGFDETLRKAFRDPEILMSTFLFGI-NRALLQGKEPFGMAVMERVTNYRTRTIHLPYGDQAFCFTAHKFAEMGGFPDIVMMEDFEVVRLLRKEELAGGGHIHVLDEAALCSPRRWEKPGNNPFVNFWRNWVFLFLYSRLGFTATQIFR 1048
+PN H +SV+VP YNEG AN+ + Q L K R EI++V+AGC D T + S K+ S GRG A+ G + GEL LF+HAD+ +PLG+D LRKA DPE+ M F F + NR + +A +ER N R+ + LPYGDQA + ++ +GG MMEDF++V R L G I +L E LCSPRRW+ G RNW F+ + T I+R
Sbjct: 61 SPNETNHKSK--LSVIVPVYNEG------AANLHSLVQDIREKTCL------------------------KHRTEIVLVNAGCTDDTFQDIGSFINDTKV--VKSSPGRGQALRTGVDSSAGELLLFLHADSQLPLGYDNILRKALCDPEVEMCAFSFKVDNRGIHDRAFLKSIAHIERSANQRSAFLWLPYGDQAISMSRQSYSRLGGIQPYSMMEDFDLVTRARHSALKNGRRICILPENVLCSPRRWQNKGI--LATTIRNWFFVAAFVWGKVTPDTIYR 307 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig616.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig616.8.1 >prot_P-littoralis_Contig616.8.1 ID=prot_P-littoralis_Contig616.8.1|Name=mRNA_P-littoralis_Contig616.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=351bp MWEALVFGVVLATSFGYWGLKREQLGPKLTPNSECHVGDGFVSVVVPAYNback to top mRNA from alignment at P-littoralis_Contig616:31026..40787+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig616.8.1 ID=mRNA_P-littoralis_Contig616.8.1|Name=mRNA_P-littoralis_Contig616.8.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9762bp|location=Sequence derived from alignment at P-littoralis_Contig616:31026..40787+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig616:31026..40787+ >mRNA_P-littoralis_Contig616.8.1 ID=mRNA_P-littoralis_Contig616.8.1|Name=mRNA_P-littoralis_Contig616.8.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1053bp|location=Sequence derived from alignment at P-littoralis_Contig616:31026..40787+ (Pylaiella littoralis U1_48)back to top |