prot_P-littoralis_Contig116.67.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig116.67.4
Unique Nameprot_P-littoralis_Contig116.67.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length325
Homology
BLAST of mRNA_P-littoralis_Contig116.67.4 vs. uniprot
Match: D7FZ07_ECTSI (RanBP2-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ07_ECTSI)

HSP 1 Score: 321 bits (822), Expect = 5.440e-106
Identity = 161/183 (87.98%), Postives = 170/183 (92.90%), Query Frame = 0
Query:   53 IEGIAELDASMGRGAPIPPAAGGGKPLPKKEQKDFRGPAGLFKQGDWTCTACGNVNWERRSTCNKCNNQKPNLANTEEAREGLGGGFNERQDRASVATVEVDEDGYDDFGRKKIKARADKKAKENAALARLRKSFGGGMLGGTSLAPTGKPTVPGQFDDA-----VTTYDEFGRPKLAGGGRN 230
            I GIAELDASMGRGAP+PPA GGGKPL KKEQKDFRGPAGLFK+GDWTCTACGNVNWERR+TCNKCNN KPNLA T+EAREGLGGGFNERQDRASVATVEVDEDG+DDFGRKKIKARADKKAKE+AALARLRKSFGGG+LGGTSLAP GKP V GQFDDA     VTTYD+FGRP+LAGGGRN
Sbjct:   40 IAGIAELDASMGRGAPVPPAGGGGKPLLKKEQKDFRGPAGLFKKGDWTCTACGNVNWERRATCNKCNNPKPNLAATDEAREGLGGGFNERQDRASVATVEVDEDGFDDFGRKKIKARADKKAKEDAALARLRKSFGGGILGGTSLAPVGKPPVRGQFDDASPAPSVTTYDKFGRPRLAGGGRN 222          
BLAST of mRNA_P-littoralis_Contig116.67.4 vs. uniprot
Match: A0A7S2CIC2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CIC2_9STRA)

HSP 1 Score: 140 bits (353), Expect = 3.340e-37
Identity = 70/103 (67.96%), Postives = 80/103 (77.67%), Query Frame = 0
Query:   86 DFRGPAGLFKQGDWTCTACGNVNWERRSTCNKCNNQKPNLANTEEAREGLGGGFNERQDRASVATVEVDEDGYDDFGRKKIKARADKKAKENAALARLRKSFG 188
            D RGPAGLF   DW C  CGNVNW RRSTCN CN +KP+LA+ ++AREGLGGGF ERQ++AS++TVEV EDGYDDFGRK      DK AKE AALARL  S+G
Sbjct:   25 DHRGPAGLFVAADWDCPGCGNVNWARRSTCNMCNTKKPDLADPDDAREGLGGGFLERQEQASLSTVEVAEDGYDDFGRKIKSKNKDKAAKEAAALARLTASYG 127          
BLAST of mRNA_P-littoralis_Contig116.67.4 vs. uniprot
Match: A0A4D9D5Z5_9STRA (RanBP2-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5Z5_9STRA)

HSP 1 Score: 137 bits (345), Expect = 9.940e-36
Identity = 68/109 (62.39%), Postives = 84/109 (77.06%), Query Frame = 0
Query:   82 KEQKDF-RGPAGLFKQGDWTCTACGNVNWERRSTCNKCNNQKPNLANTEEAREGLGGGFNERQDRASVA-TVEVDEDGYDDFGRKKIKARADKKAKENAALARLRKSFG 188
            +E+ DF +GP GLFK  DW C +CGNVNWERR  CN C  +KP LA + EAREGLGGGF ERQ+R +++  VEV EDG+DDFGRKK K + D+KAKE AALARL+ ++G
Sbjct:   92 REEMDFSKGPPGLFKASDWNCPSCGNVNWERREFCNMCGGKKPTLAGSGEAREGLGGGFLERQERGAISQAVEVGEDGFDDFGRKKAKEKVDRKAKEMAALARLKATYG 200          
BLAST of mRNA_P-littoralis_Contig116.67.4 vs. uniprot
Match: A0A7S2WNS0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WNS0_9STRA)

HSP 1 Score: 132 bits (333), Expect = 3.020e-33
Identity = 79/160 (49.38%), Postives = 90/160 (56.25%), Query Frame = 0
Query:   64 GRGAPIPPAAGGGKPLPKKEQKDFRGPAGLFKQGDWTCTACGNVNWERRSTCNKCNNQKPNLANTEEAREGLGGGFNERQDRASVATVEVDEDGYDDFGRKKIKARADKKAKENAALARLRKSFGGGMLGGTSLAPTGKPTVPGQFDDAVTTYDEFGRPK 223
            G G P     G G         DFRGP GLF + DW C  CGNVNW RRS CN C   KP+ A  +E R+GLGGGF ERQ+RAS   VEV +DG+DDFGRK  +  ++K AKE AALARL  SF G   G                +D V  YDEFGR K
Sbjct:    7 GAGPPGAGRGGRGXXXXXGRGADFRGPPGLFVKADWDCNGCGNVNWARRSHCNMCGQAKPSTAGPDEQRDGLGGGFLERQERASSTQVEVADDGFDDFGRKAKQRASNKSAKEAAALARLNASFTGVRTGVV-------------IEDDVE-YDEFGRKK 152          
BLAST of mRNA_P-littoralis_Contig116.67.4 vs. uniprot
Match: A0A8K1CMJ3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMJ3_PYTOL)

HSP 1 Score: 130 bits (326), Expect = 1.890e-32
Identity = 61/99 (61.62%), Postives = 74/99 (74.75%), Query Frame = 0
Query:   89 GPAGLFKQGDWTCTACGNVNWERRSTCNKCNNQKPNLANTEEAREGLGGGFNERQDRASVATVEVDEDGYDDFGRKKIKARADKKAKENAALARLRKSF 187
            GP GLFK GDW C  CGNVNWERR+ CN C   KP ++  +E R+G+GGGFNERQ+R + A  EVDEDGYDDFG KK K +A K  +E AALARL++S+
Sbjct:   64 GPPGLFKAGDWACLTCGNVNWERRNECNICKGSKPGMSGLDEKRDGIGGGFNERQERVASAKKEVDEDGYDDFGVKKKKVKASKAEREAAALARLKQSY 162          
BLAST of mRNA_P-littoralis_Contig116.67.4 vs. uniprot
Match: F0WQ51_9STRA (2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WQ51_9STRA)

HSP 1 Score: 136 bits (343), Expect = 2.640e-32
Identity = 64/102 (62.75%), Postives = 75/102 (73.53%), Query Frame = 0
Query:   86 DFRGPAGLFKQGDWTCTACGNVNWERRSTCNKCNNQKPNLANTEEAREGLGGGFNERQDRASVATVEVDEDGYDDFGRKKIKARADKKAKENAALARLRKSF 187
            DFRGP GLFK GDWTCT CGNVNWERR  CN C N KP +   +E R+G+ GGFNERQ+R + A  E+ EDGYDDFG KK K  A K  +E AALARL++S+
Sbjct:   64 DFRGPPGLFKPGDWTCTVCGNVNWERRQECNICKNAKPGMPGVDERRDGVAGGFNERQERVASAKAEIGEDGYDDFGMKKKKINASKTQREAAALARLQQSY 165          
BLAST of mRNA_P-littoralis_Contig116.67.4 vs. uniprot
Match: A0A024GHB5_9STRA (2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GHB5_9STRA)

HSP 1 Score: 135 bits (339), Expect = 1.340e-31
Identity = 63/102 (61.76%), Postives = 75/102 (73.53%), Query Frame = 0
Query:   86 DFRGPAGLFKQGDWTCTACGNVNWERRSTCNKCNNQKPNLANTEEAREGLGGGFNERQDRASVATVEVDEDGYDDFGRKKIKARADKKAKENAALARLRKSF 187
            DFRGP GLFK GDWTCT CGNVNWERR  CN C N KP +   +E R+G+ GGFNERQ+R + A  E+ EDGYDDFG +K K  A K  +E AALARL++S+
Sbjct:   67 DFRGPPGLFKPGDWTCTVCGNVNWERRQECNICKNAKPGMPGADERRDGVAGGFNERQERVASAKAEIGEDGYDDFGMRKKKLNASKTQREVAALARLQQSY 168          
BLAST of mRNA_P-littoralis_Contig116.67.4 vs. uniprot
Match: H3HB99_PHYRM (RanBP2-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HB99_PHYRM)

HSP 1 Score: 130 bits (326), Expect = 9.900e-31
Identity = 70/141 (49.65%), Postives = 87/141 (61.70%), Query Frame = 0
Query:   68 PIPPAAGGGKPLPKKEQKDFRGPAGLFKQGDWTCTACGNVNWERRSTCNKCNNQKPNLANTEEAREGLGGGFNERQDRASVATVEVDEDGYDDFG-RKKI--------------------KARADKKAKENAALARLRKSF 187
            P P   GG KP P     D RGP GLF+ GDWTC  CGNVNWERR+ CN C + KP ++  +E R+G GGGFNERQ+RA+ A  E+D+DGYDDFG RKK+                    K +A K  +E AALARL++S+
Sbjct:  287 PRPEGLGGEKPKPTSA--DVRGPPGLFQPGDWTCNTCGNVNWERRNECNMCKSSKPGMSGLDEKRDGAGGGFNERQERAASAKAEIDDDGYDDFGMRKKVQDLQRTILDKELTELLYLLQKVKASKAEREAAALARLQQSY 425          
BLAST of mRNA_P-littoralis_Contig116.67.4 vs. uniprot
Match: A0A835YR36_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR36_9STRA)

HSP 1 Score: 114 bits (285), Expect = 6.760e-25
Identity = 61/98 (62.24%), Postives = 70/98 (71.43%), Query Frame = 0
Query:   96 QGDWTCTACGNVNWERRSTCNKCNNQKP-NLANTEEAREGLGGGFNERQDRASVATVEVDEDGYDDFGRKKIKARADKKAKENAALARLRKSFGGGML 192
            Q DWTC  CGNVNW  R  CN C   KP  L   +E R+GLGGGFNERQDRAS+ATVEV EDGYDDFGRK  KA+AD++  E AAL RL ++F  G +
Sbjct:  150 QADWTCD-CGNVNWGWRQECNLCQASKPATLVGPDEVRDGLGGGFNERQDRASLATVEVGEDGYDDFGRKIKKAKADRRVLELAALNRLEQAFSSGAM 246          
BLAST of mRNA_P-littoralis_Contig116.67.4 vs. uniprot
Match: I0Z485_COCSC (Uncharacterized protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z485_COCSC)

HSP 1 Score: 97.4 bits (241), Expect = 6.920e-19
Identity = 58/125 (46.40%), Postives = 71/125 (56.80%), Query Frame = 0
Query:   88 RGPAGLFKQGDWTCTACGNVNWERRSTCNKCNNQKPNLANTEEAREGLGGGFNERQD-------RASVATVEVDEDGYDDFGRKKIKAR---ADKKAKENAALARLRKSFGGGMLGGTSLAPTGK 202
            +GP G+F +GDWTC+ CGN NW RRSTCN CN  KP   +T   REG  GGF E  +       R        D + YD+FGR K K R   AD+KA+E AALARL  + G G     S +P G+
Sbjct:  361 QGPPGMFNEGDWTCSGCGNTNWARRSTCNMCNQPKPGTVDTN--REGNAGGFKELDEAEIEEARRRRQQLENDDSEMYDEFGRIKKKFRGTEADRKAREEAALARLHGTSGSGGERQRSRSPAGR 483          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig116.67.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZ07_ECTSI5.440e-10687.98RanBP2-type domain-containing protein n=2 Tax=Ecto... [more]
A0A7S2CIC2_9STRA3.340e-3767.96Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A4D9D5Z5_9STRA9.940e-3662.39RanBP2-type domain-containing protein n=1 Tax=Nann... [more]
A0A7S2WNS0_9STRA3.020e-3349.38Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8K1CMJ3_PYTOL1.890e-3261.62Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
F0WQ51_9STRA2.640e-3262.752-(3-amino-3-carboxypropyl)histidine synthase subu... [more]
A0A024GHB5_9STRA1.340e-3161.762-(3-amino-3-carboxypropyl)histidine synthase subu... [more]
H3HB99_PHYRM9.900e-3149.65RanBP2-type domain-containing protein n=1 Tax=Phyt... [more]
A0A835YR36_9STRA6.760e-2562.24Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
I0Z485_COCSC6.920e-1946.40Uncharacterized protein n=1 Tax=Coccomyxa subellip... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 97..121
e-value: 1.3E-5
score: 34.6
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 99..118
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 95..124
score: 10.0034
NoneNo IPR availableGENE3D4.10.1060.10coord: 86..124
e-value: 6.7E-11
score: 43.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..324
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 298..312
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..289
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 87..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig116contigP-littoralis_Contig116:242891..246261 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig116.67.4mRNA_P-littoralis_Contig116.67.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig116 242132..246356 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig116.67.4 ID=prot_P-littoralis_Contig116.67.4|Name=mRNA_P-littoralis_Contig116.67.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=325bp
MSDSTTAEAPAYDPAAAAATAPTPAPGGFPGAGGGGGRGRGRGRGRGGGG
IAIEGIAELDASMGRGAPIPPAAGGGKPLPKKEQKDFRGPAGLFKQGDWT
CTACGNVNWERRSTCNKCNNQKPNLANTEEAREGLGGGFNERQDRASVAT
VEVDEDGYDDFGRKKIKARADKKAKENAALARLRKSFGGGMLGGTSLAPT
GKPTVPGQFDDAVTTYDEFGRPKLAGGGRNGGGGGGGSGGGGDSGNGKGN
GSSGREKDGRGQSRERDRDHRRDNSDRSRGGGDTDRRRRGRSRSRSRSRE
RSSRDDKDSSRRRRSRSRSRDRRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2
IPR036443Znf_RanBP2_sf