prot_P-littoralis_Contig615.40.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig615.40.1
Unique Nameprot_P-littoralis_Contig615.40.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length121
Homology
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BLAST of mRNA_P-littoralis_Contig615.40.1 vs. uniprot
Match: D7FPP7_ECTSI (Similar to CG7186-PA n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP7_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 4.750e-6
Identity = 49/114 (42.98%), Postives = 55/114 (48.25%), Query Frame = 0 
Query:    1 MSARQAGEHAWLGGREAVELKRAEAEAITKARQEEREAQQKERTQLLRSRRRRKVPKIIMTTRVPALVAEGA--------------------SATAAGPGIPRAMMAEASGSKA 94
            MSARQAGEH WLG   AV LKRAE EA+ K  QE  +A               +VPK+    RV A VAEGA                    +AT AG  +PRAMM   SGS A
Sbjct:  494 MSARQAGEHPWLGDEGAVMLKRAEVEAVLKEAQETEQAXXXXXXXXXXXXXXXRVPKMARAARVLAPVAEGALQPASSTAGAVSMLTSASVGAATGAGADVPRAMMVAESGSTA 607
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig615.40.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FPP7_ECTSI4.750e-642.98Similar to CG7186-PA n=2 Tax=Ectocarpus siliculosu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 17..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig615contigP-littoralis_Contig615:168739..169609 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig615.40.1mRNA_P-littoralis_Contig615.40.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig615 168739..173097 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig615.40.1 ID=prot_P-littoralis_Contig615.40.1|Name=mRNA_P-littoralis_Contig615.40.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=121bp
MSARQAGEHAWLGGREAVELKRAEAEAITKARQEEREAQQKERTQLLRSR
RRRKVPKIIMTTRVPALVAEGASATAAGPGIPRAMMAEASGSKAAAEMNG
APATAPVATATAEGVAADGA*
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