prot_P-littoralis_Contig116.66.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig116.66.1
Unique Nameprot_P-littoralis_Contig116.66.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length548
Homology
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BLAST of mRNA_P-littoralis_Contig116.66.1 vs. uniprot
Match: A0A6H5L0H8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H8_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 1.000e-6
Identity = 78/181 (43.09%), Postives = 93/181 (51.38%), Query Frame = 0 
Query:  376 TLSPRGSWHLGALFGESDDDVQEAEGEP----GGCNWRLSDDEIEGEENA-LPKRRRQQRLSAGSRGVTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGWADSLPPPAL--VDANSSSSTEGSNS---QSVREQNEQAELEAILAHFRKVDSHQLNLS 546
            + SPRG W LGALF +SD               GCNWRLSDDE EG++   L KRR  +R +A   G  +       XXXXXXXX          XXXXXXXXXX                G AD    P++  VD  ++  + G  S   Q + EQ E AELEAI A FRKVDSH+L+LS
Sbjct:  346 SFSPRGPWRLGALFADSDXXXXXXXXXXXXGLAGCNWRLSDDENEGDDEIDLHKRRSPRRFAARKEGPVSARKKMRRXXXXXXXXRGSDGCNSAGXXXXXXXXXXAMVEKAG---------GGADGSLSPSVPVVDGTAAGGSPGKASTSQQGIEEQAEHAELEAIRAQFRKVDSHRLSLS 517
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BLAST of mRNA_P-littoralis_Contig116.66.1 vs. uniprot
Match: D7FZ06_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ06_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 1.070e-6
Identity = 100/184 (54.35%), Postives = 112/184 (60.87%), Query Frame = 0 
Query:  380 RGSWHLGALFGESDDDVQEAEGEP-----GGCNWRLSDDEIEGEENALPKRRRQQRLSAGSRGVTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK-------GWADSLPPPAL--VDANSSSSTEGSNS---QSVREQNEQAELEAILAHFRKVDSHQLNLS 546
            RG W LGALF +S                 GCNWRLSDDE EG++     +RR  R SA  RG   XXXXXXXXXXXXXXX          XXXXXXXXXXXXXXXXXXXXXXXXX        GWAD    P++  VDA ++  + G  S   Q + EQ EQAELEAI A FRKVDSH+L+LS
Sbjct:  380 RGPWRLGALFADSXXXXXXXXXXXXXXXLAGCNWRLSDDENEGDDEIDLHKRRSPRRSAAGRGXXXXXXXXXXXXXXXXXXDRGSDGCNSAXXXXXXXXXXXXXXXXXXXXXXXXXXAKVEQAGGWADGSLSPSVPVVDATAAGGSPGKASTSQQGIEEQAEQAELEAIRAQFRKVDSHRLSLS 563
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig116.66.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L0H8_9PHAE1.000e-643.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZ06_ECTSI1.070e-654.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..245
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 345..378
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 502..524
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..206
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 266..280
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 407..426
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..527
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig116contigP-littoralis_Contig116:238176..240552 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig116.66.1mRNA_P-littoralis_Contig116.66.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig116 238102..241922 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig116.66.1 ID=prot_P-littoralis_Contig116.66.1|Name=mRNA_P-littoralis_Contig116.66.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=548bp
MTTPYSPAGTRTHPTATTKHFDTAMPSSTSPAAGKENAGSTAIMAAKPGR
RGVGPRSGTKSTTIPSRAPTATAVSSEKALVPPLSARRVWPKATRSSSRV
KAAAPKPRGLTSNTSSSQLVVNAASTRPEPVSSAGAAVGTAKDKSQRQKE
QQERQQQRVRPAVSLSLPVPLIHSSGESSSTGGVGKTRSSAAIRSGGLQA
GQSRQPQRGVAGKPAKKTLKPTKKKRQVSSSKLVGYSNSQPPRFPPQGRS
DFDFELDDSATDGDDGDDANDNRGSTRRSEGTSHRQGGTAAAGRKKKASG
GGGGGGGGGGGKYARAERTQASSGTSGGAGEGSDGGPPLALGSVAKATSI
SNARRSSSLRTATYSPRSMSSSGGETLSPRGSWHLGALFGESDDDVQEAE
GEPGGCNWRLSDDEIEGEENALPKRRRQQRLSAGSRGVTAGRKKRRASGG
AESEGGRNGAGGGGRGGRNKRLSTGGGGSGGGGGEAKEEQKGWADSLPPP
ALVDANSSSSTEGSNSQSVREQNEQAELEAILAHFRKVDSHQLNLSH*
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