mRNA_P-littoralis_Contig614.30.3 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig614.30.3 vs. uniprot
Match: D7FIX0_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX0_ECTSI) HSP 1 Score: 1160 bits (3001), Expect = 0.000e+0 Identity = 677/1218 (55.58%), Postives = 807/1218 (66.26%), Query Frame = 1
Query: 142 RFLVLERGVLFVYASENDWADHQEPLDDVVLSPDSTVETVPEGAEFLVKLRCPGYPQLTFNGNSATLSPETDADGTSHVDSGNAGPNSWAWGEALTREIAKL-------RREPTIGRWRGSSGAGGGASSRRLLDAVSEAAGGEASVFVSVSSAETSXXXXXXXXXXXXXXXXFVFEKDEDSYFGVSSLSARKEEGXXXXXXXXXXXXXXXXXXXXXXXXVVGGSGREIRGIPGVGGVDGSTRSAGGEKTGPAFRRWPLKRDGPNQYIPTIDSTGDQVGAASSTASQXXXXXXXXXXXXXXXXXXXXXXXXXXADRGIESETGGGGGPVGGARGAGG----------MSSLWKKVAAFVKTKDVSDCTCILCLERSSGSHSGHSHAKLDRMSSASYRHACSWVKKCHHPSSKVGPSPAGHRWEYLVGRWVPLQMARSGDVVGVKRFLEKFPAFPDKDNLLRAAVRYKQYSLVEYMLEEQGMDVNLTNSMGMPLVWFSVMFMPKGDSGVMLRYLLQKGADIHSKSHLGQTVVFMLVSSRGKEAIPMLKYLVEECGLSLSDKDNFGSRPLHWAVLHGHLDTVQWISRSTKYQAARANWAKAFEQMQQSRMVRPEHVGAARSWRMRGLRKSARSLTPLGVAVLHNHEHIAKWLMGYGGEDGACLSCKRENLFADGNRDLALVAKTWPELLPEVLQGFEHVQKALSTSWDTADKRVLTPTGWSERVYDVRLLYGIPEVPVNRSPLSILLTTDHPLVFETKVVQMVVALKWSVFGRR-----------------------------------------YYLWELGRYLFLAMSFIMGFVMWADAANWVGPLDSSDDRLAVVGGTVSRLLCWVLTLYNLFVEEGREVAASKSIKKYLVGGWNLQSVTAYVLVLALIPVFKPWQETVEWGSGPLEYTKADTVRRCLTAPAAIFLFTRLMEHLAMWKSTGIFIAVIRMVIVDTASWSILFILFEAAFALAFYALLEGNSGYETLWASTISIFVLSFGEFDLPFSENEVLNLTAVIMAVVFMLIVAIVYLNLLVAMMTNGYTEVVMMAAAQATMNRAAALVKWEGIMTDATRGKAFRKVAPDRGKRSHITLTGWFGGAPTEVFCNEEGARAIEPEQNSIFKRVDTHAVIMKELGEIRNMLGKSAARGGGHFARKAPDAGG---ES-TVDSSDYDASFRKRQAGMLDAHGKGLSTLRL 3609
RFLVL+ VL VYAS++DWADHQEPLDDVVLS +S VET E LVKLR PG+ L F ++ ++ T P+S AW A+++EIA L RR T+ RG G G S RL +AV A G + + A+ + G S+ A +++G XXXXXXXXXXXXXXXX + S+ G FRR PLKR + +S V A T Q G P G RG GG S+LW++VA V+ D + CT E SG H S YR CSW + S + SP RWEYLVGRW+PLQMARSGDV+GV+ FLEKFPAFPDKDNLLRAAVRYKQYSLVEY+LEEQ MDVNL N+MGMP+VWFSV FM +GDSGVMLRYLLQKGADIH KS +GQT++F+LVSSRGKEAIPMLKYLVEE GLSL++KD+FGS+PLHWAVLHGHLDTV+WIS TKY A RANWAKAFE+MQ+ R+V+PEH+GAARSWR+RGL+KSARSLTPLGVAVLHNHEHIA+WLMGYG E C+SCKR N+F + NRDLALVAKTWPELLPEVL+GF+H KA SWDT +KR + PTGWSER YD++LLYG+PEV +RSPLSILL T H +FE KVVQMVVALKWSVFG R YY+WELGRYL L+ SFIMGF +WA+ NW GP+DS DDR V+G T+SRLLCW LTLYNL VEEGRE+AASKS++KYL GGWNLQSVTAYVLVLA+IPVF+PW + +W EY+ A +RR +TAPAA+FLF RLMEHLA+WKSTGIFIAVIRMVIV TASWS+LF LF+ AFAL+FY+LL+GN G+ET+WAS +SIFV+S GEF LPFS+N L++ A++M VVFMLIVAIVYLNLLVAMMT+GYTE+ A AQATM+RAAALVKWEGIM+D TR R+VAP +GK S +T+TGW GG TE+FC +EGA A+EPEQ++I +RVDTHA +MKEL EIR+++ K+++RGGG F+R+ P+ G ES S D DASFRKRQAG+LD+ G GLS L +
Sbjct: 15 RFLVLDHAVLLVYASKSDWADHQEPLDDVVLSAESVVETTREREGALVKLRGPGHSPLCFTCSAVNVNDSTTR------------PDSEAWEVAISQEIAGLGGDAGTSRRPHTVAAARG----GRGVRSWRLWNAVRRDAEGNSGKAGAALIADPAG--------------------------GGGSVDATEKDGSNHDETKHXXXXXXXXXXXXXXXXXXX-----------------ARLSSRG------FRRRPLKRSDTTCKVSDQESASSLVVAPVVTEGQ--------------------------------------GKPATGGRGEGGEGNPISDSSRASNLWRRVAGVVRQNDRAICTS----EPGKNGGSGSQHLSE---SGNKYRRECSWARSKKRASVQAKLSPVVDRWEYLVGRWIPLQMARSGDVLGVRSFLEKFPAFPDKDNLLRAAVRYKQYSLVEYLLEEQHMDVNLKNAMGMPVVWFSVAFMQRGDSGVMLRYLLQKGADIHIKSRVGQTMLFLLVSSRGKEAIPMLKYLVEELGLSLTEKDDFGSQPLHWAVLHGHLDTVRWISEYTKYPATRANWAKAFEKMQKIRLVKPEHMGAARSWRIRGLQKSARSLTPLGVAVLHNHEHIARWLMGYGTEGQHCISCKRNNIFKEENRDLALVAKTWPELLPEVLRGFQHDMKAQKYSWDTDEKRPVAPTGWSERTYDIKLLYGLPEVASSRSPLSILLQTGHTSLFEVKVVQMVVALKWSVFGHRPTRLGAARPSTHVWWIVMGCFPPVAESKALSGIMYNRTISRYYVWELGRYLVLSASFIMGFTIWAEVPNWAGPIDSDDDRGQVMGATISRLLCWTLTLYNLVVEEGRELAASKSMRKYLEGGWNLQSVTAYVLVLAMIPVFRPWGDGRDWMEDEFEYSSAGLIRRVMTAPAALFLFLRLMEHLAVWKSTGIFIAVIRMVIVGTASWSVLFGLFQMAFALSFYSLLDGNEGFETIWASMVSIFVMSLGEFSLPFSDNMTLHVMAMLMLVVFMLIVAIVYLNLLVAMMTSGYTEMEKGATAQATMDRAAALVKWEGIMSDKTR----RQVAPGKGKSSEVTITGWSGGGATEIFCTDEGATAVEPEQSTIGRRVDTHAAVMKELAEIRSLVEKASSRGGG-FSRRPPNGPGMQGESFRTSSDDRDASFRKRQAGLLDSGGMGLSVLNI 1117
BLAST of mRNA_P-littoralis_Contig614.30.3 vs. uniprot
Match: A0A6H5K0W6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0W6_9PHAE) HSP 1 Score: 603 bits (1555), Expect = 1.820e-184 Identity = 310/446 (69.51%), Postives = 349/446 (78.25%), Query Frame = 1
Query: 1069 GIESETGGGGGPVGGARGAGGMSSLWKKVAAFVKTKDVSDCTCILCLERSSGSHSGHSHAKLDRMSSASYRHACSWVKKCHHPSSKVGPSPAGHRWEYLVGRWVPLQMARSGDVVGVKRFLEKFPAFPDKDNLLRAAVRYKQYSLVEYMLEEQGMDVNLTNSMGMPLVWFSVMFMPKGDSGVMLRYLLQKGADIHSKSHLGQTVVFMLVSSRGKEAIPMLKYLVEECGLSLSDKDNFGSRPLHWAVLHGHLDTVQWISRSTKYQAARANWAKAFEQMQQSRMVRPEHVGAARSWRMRGLRKSARSLTPLGVAVLHNHEHIAKWLMGYGGEDGACLSCKRENLFADGNRDLALVAKTWPELLPEVLQGFEHVQKALSTSWDTADKRVLTPTGWSERVYDVRLLYGIPEVPVNRSPLSILLTTDHPLVFETKVVQMVVALKWSVFGRR 2406
G E G G P+ G+ A S+LW++VA V+ D + CT G + G+ L S YR CSW + S SP RWEYLVGRW+PLQMARSGDV GV+ FLEKFPAFPDKDNLLRAAVRYKQYSLVEY+LEEQ MDVNL N MGMPLVWFSV FM +GDSGVMLRYLLQKGADIH KS +GQTV+F+LVSSRGKEAIPMLKYLVEE GLSL++KD FGS+PLHWAVL+GHLDTV+WIS TKY A RANWAKAFE+MQ R+V+PEH+GAARSWR+RGL+KSARSLTPLGVAVLHNHEHIAKWLMGYG E C+SCKR NLF + NRDLALVAKTWPELLPEVLQGF+H +K SWDT +KR + PTGWSER YD++LLYG+PEV +RSPLSILL T H +FE KVVQMVVALKWSVFG R
Sbjct: 192 GRRGEERGEGNPISGSSRA---SNLWRRVAGVVRQNDGAICT------PEPGKNGGNGSQHLSG-SGNKYRRECSWARSKKRTSVYAKLSPVVDRWEYLVGRWIPLQMARSGDVHGVRSFLEKFPAFPDKDNLLRAAVRYKQYSLVEYLLEEQHMDVNLKNVMGMPLVWFSVAFMQRGDSGVMLRYLLQKGADIHIKSRVGQTVLFLLVSSRGKEAIPMLKYLVEELGLSLTEKDEFGSQPLHWAVLYGHLDTVRWISEYTKYPATRANWAKAFEKMQDIRLVQPEHMGAARSWRIRGLQKSARSLTPLGVAVLHNHEHIAKWLMGYGTEGEQCISCKRNNLFKE-NRDLALVAKTWPELLPEVLQGFQHDRKVEKYSWDTDEKRPVAPTGWSERTYDIKLLYGLPEVASSRSPLSILLQTGHTSLFEVKVVQMVVALKWSVFGHR 626
BLAST of mRNA_P-littoralis_Contig614.30.3 vs. uniprot
Match: A0A835Z0J0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0J0_9STRA) HSP 1 Score: 339 bits (870), Expect = 4.040e-90 Identity = 246/806 (30.52%), Postives = 365/806 (45.29%), Query Frame = 1
Query: 1351 RWEYLVGRWVPLQMARSGDVVGVKRFLEKFPAFPDKDNLLRAAVRYKQYSLVEYMLEEQGMDVNLTNSMGMPLVWFSVMFMPKGDSGVMLRYLLQKGADIHSKSHLGQTVVFMLVSSRGKEAIPMLKYLVEECGLSLSDKDNFGSRPLHWAVLHGHLDT----------------VQWISRSTKYQAARANWAKAFEQMQQSRMVRPEHVGAARSWRMRGL--------------RKSARSLTPLGVAVLH------NHEHIAKWLMGYG-GEDGACLSCKRENLFADGNRDLALVAKTWPELLPEVLQGF-------------------------------EHVQKALSTSWDTADKRVLTPT----------------------------------------------------------GWSERVYDVRLLYGIPEVPVNRSPLSILLTTDHPLVFETKVVQMVVALKWSVFGRRYYLWELGRYLFLAMSFIMGFVMWADAANWVGPLDSSDDRLAVVGGTVSRLLCWVLTLYNLFVEEGREVAASKSIKKYLVGGWNLQSVTAYVLVLALIPVFKPWQETVEWGSGPLEYTKADTVRRCLTAPAAIFLFTRLMEHLAMWKSTGIFIAVIRMVIVDTASWSILFILFEAAFALAFYALLEGNSGYETLWASTISIFVLSFGEFDLPFSENEVLNLTAVIMAVVFMLIVAIVYLNLLVAMMTNGYTEVVMMAAAQATMNRAAALVKWEGIMTDATRGKAFRKVAPDRGKRSHITLTGWFGG-APTEVFCNEEGARAIEPEQNSI 3387
RW +V W LQ+ARSGDV V+RFL++FP F DN+ RAA+R+K Y+LVEY L+E MDVN+ N GMP WF+ +F+ K D G M++YL+ +GA + S ++ G T++ +L ++ +AI ++ + + +D+ G H H ++ +S K + +A + Q R H +RG ++S + T V VL + +A+WLMGYG G C+ KR LF D DL +VAKTWPELLPEVL F +H + + D + + L P GW ER+YDV+LLYG P++P + +PLSILL T + VF+ VV++++ LKW+++G YY+WEL RY ++F MGF+ W+G +SS + R+ CW LT YNL EEGRE+ S S + Y WN QS+ Y L LAL P++ + T G +R + APAA+ LF R +EHLA+W+ST I+IAVIR + V S + D PFS++ LN A ++ ++F+++VA++ LNLL+AM+T Y ++ A AQ M++A L+KWEG M R + +R + P G + I L F G + +EVF AR +E ++ +
Sbjct: 1557 RWGKMVTSWYSLQIARSGDVDDVRRFLKRFPDFKGVDNMFRAAIRFKHYALVEYFLDEVKMDVNVRNGSGMPACWFAAIFLNKSDGGAMMQYLINRGAIVDSVNNWGMTMIHLLATADPAQAIT-----ADDAHSAYNARDSSG----HSVATHSRSSLALSKQSLAQPNFNGFILEKLSHRRKAAMRLFHSYRALSAVDQYRFYSLPHTTGYAYGLLRGHSMSAAGREQVAQRHKRSGDACTLTFVRVLQLICSHRDRVQVAQWLMGYGPGHSVKCMRDKRALLFQDQCHDLRMVAKTWPELLPEVLNSFGSDVVKNSHFTAQDGRLERASEFFNIRSERVQHFRSVYNMMSDQSPQYTLMPVRAAPLSGGWVERIYNVKLLYCCNLLQERVQRYSEAYTRGFVVNNRFTLMPLRAATAAGGWVERIYDVKLLYGEPDIPASNTPLSILLDTHYAPVFDLPVVKLIIQLKWTLYGGSYYMWELMRYFGTVITFYMGFI-------WLG--NSSAAHAEAI-----RIACWALTAYNLVFEEGRELLHSPSARAYFGSSWNRQSLVTYTLTLALAPLY--YLPTSHSGFELDAPNGPPLAQRMMVAPAALALFLRALEHLAIWRSTSIYIAVIRSL-----------------------------------------CRVRSLPQIDQPFSDDTALNAAASVLLILFVMLVAVLQLNLLIAMLTCSYESMMDKAPAQTLMHKAETLLKWEGGMHPRQRHRFYRIINPKPGTQRRIKLNKLFSGMSRSEVFVYNTEARVVEQKKGVV 2296
BLAST of mRNA_P-littoralis_Contig614.30.3 vs. uniprot
Match: A0A7S1TWL2_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TWL2_9STRA) HSP 1 Score: 327 bits (838), Expect = 2.270e-89 Identity = 229/700 (32.71%), Postives = 362/700 (51.71%), Query Frame = 1
Query: 1351 RWEYLVGRWVPLQMARSGD--VVGVK-RFLEKFPAFPDKD--NLLRAAVRYKQYSLVEYMLEEQGMDVNLTNSMGMPLVWFSVMFMPKGDSGVM-----LRYLLQKGADIHSKSHLGQTVVFMLVSSRGKEAIPMLKYLVE---------ECGLSLSDKDNFGSRPLHWAVLHGHLDTVQWISRSTKYQ--AARANWAKAFEQMQQSRMVRPEHVGAARSWRMRGLRKSARSLTPLGVAVLHNHEHIAKWLMGYG-GEDGACLSCKRENLFADGNRDLALVAKTWPELLPEVLQGFEHVQKALSTSWDTADKRVLTPTGWSERVYDVRL--LYGIPEVP-VNRSPLSILLTTDHPLVFETKVVQMVVALKWSVFGRRYYLWELGRYLFLAMSFIMGFVMWADAAN-WVGPLDSSDDRLAVVGGTVSRLLCWVLTLYNLFVEEGREVAASKSIKKYLVGGWNLQSVTAYVLVLALIPVFKPWQETVEWGSGPLEYTKADTVRRCLTAPAAIFLFTRLMEHLAMWKSTGIFIAVIRMVIVDTASWSILFILFEAAFALAFYALLEGNSGYETLWASTISIFVLSFGEFDLPFSENEVLNLTAVIMAVVFMLIVAIVYLNLLVAMMTNGYTEVVMMAAAQATMNRAAALVKWEGIMTDATRGKAFRKVAPDRGKRSHITLTGWFGGAPTEVFCNEEGARAIEP 3372
+W + +W+ L AR GD ++G+ +L++ DKD NLLRAA R+K V Y++EE+G+DVN TN G P+VWF ++ + ++ V YLL++GAD + GQ ++F + + + ++Y+ + E + +D FGS +H AVL+G+ V + + R++WA A + + + EH+ A SW RGL +AR L+PLGVA+LHN E +A+ L+ G C +R +F D N DLAL+A+ WP L+P VL D D V V +RL +G P V +PL+IL + P V V +V+ +KW +FG+R Y+ +L RY + +S+ +GF+++ + W + +R C+ L ++ EE V +KS +YL +N ++ +YV + A++P Q+ + W + + R L A A LF R++E LA+ +TG F+A++R V++D A WS +F+L +AFA+AFY+LL G G+ S S+F +S GEFD PF E+ +N A VF+++V ++YLN+L+AMM + Y V A A A+ NRAA L+++E ++D R K KV P RG+R H +L G ++F + A I P
Sbjct: 346 KWAEVFAKWITLSAARVGDRRMLGLSLAWLDRAKPGIDKDEPNLLRAACRHKHIECVRYLVEERGVDVNGTNGSGAPVVWFCLLGLHAEEARVKAASECFHYLLERGADPTVLNAWGQNIMFWMARTNSPKIGRFMQYMEDFVIVDKQGKERRIDPCQRDKFGSSIMHTAVLYGNRYLVAHLLEKSFCADLLCRSDWAGALDMISDLGLAEDEHITARNSWPGRGLMAAARRLSPLGVAILHNQEAVAQLLVAVSPSTPGGCA--RRAAVFRDDNEDLALLARAWPSLVPAVL--------------DATDVTVDEQAAGGYVVQTLRLHDWFGDPATRNVYDTPLAILSRSGRPEVLAHPVANLVIHMKWKLFGQRMYIMQLLRYAVVLVSYFLGFIIFPEQGYPWPTVM-------------YARWACFWLCVFLFMKEE--LVKMAKSRWRYLASPYNWMALASYVCIAAMVP-----QQALAWQDHASHHDTKEM--RALGAVAGALLFLRVLEFLAVLSATGAFVAMLRRVLLDAAKWSGVFLLLLSAFAVAFYSLLHGEDGFSRFGESFFSVFGMSIGEFDYPFHEDRFINDWACAFFAVFVVLVHLLYLNVLIAMMASSYKAVSEDARASASFNRAALLLRYEATISDDDREKYHNKVRPQRGRREHFSLPDETRGVVRDLFFEHDLALLIAP 1007
BLAST of mRNA_P-littoralis_Contig614.30.3 vs. uniprot
Match: A0A7R9U5T3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5T3_9STRA) HSP 1 Score: 289 bits (739), Expect = 2.410e-77 Identity = 192/590 (32.54%), Postives = 310/590 (52.54%), Query Frame = 1
Query: 1351 RWEYLVGRWVPLQMARSGDVV----GVKRFLEKFPAFPDKDNLLRAAVRYKQYSLVEYMLEEQGMDVNLTNSMGMPLVWFSVMFMPKG-DSGVMLRYLLQKGADIHSKSHLGQTVVFMLVSSRGKEAIPMLKYLV---------EECGLSLSDKDNFGSRPLHWAVLHGHLDTVQWISRSTKYQA----ARANWAKAFEQMQQSRMVRPEHVGAARSWRMRGLRKSARSLTPLGVAVLHNHEHIAKWLMGYGGEDGACLSCKREN-LFADGNRDLALVAKTWPELLPEVLQGFEHVQKALSTSWDTADKRVLTPTGWSERVYDVRLLYGIPEVPVNRSPLSILLTTDHP---LVFETKVVQMVVALKWSVFGRRYYLWELGRYLFLAMSFIMGFVMWADAANWVGPLDSSDDRLAVVGGTVSRLLCWVLTLYNLFVEEGREVAASKSIKKYLVGGWNLQSVTAYVLVLALIPVF-KPWQETVEWGSGPLEYTKADTVRRCLTAPAAIFLFTRLMEHLAMWKSTGIFIAVIRMVIVDTASWSILFILFEAAFALAFYALLEGNSGYETLWASTISIFVLSFGEFDLPFSEN 3051
RW V RW+ + ARSG +V V F +K PAF D +NLLRAA+R+K + VEY+L+E +D+N N+ G + FS++ DSG ML+YLL++GAD + GQ ++F + + + + + L+ EE L++ +D GS LH AVL G++ V++I ++T + RANW K + M + EHV A SW RGL A L+PLGVA+LHN +A+ LM + G+ L C+R +F D N DL L+AK WP L+P +LQ F ++ A + ++ P W +G P+ +PL+++L D ++ +++Q+V+ LKW +FG+RYY L RY+FL +++I GF++ D A P+ + D ++ G + R W+ L EE RE+ SK +Y + +N S+ Y +L + P+ + ++E + DT +R A A + + R++E L++ +TG +A++ ++ DT W+ +F + AF L+F ALL +E L ++ + F + GE D PFS +
Sbjct: 399 RWATFVVRWMTILDARSGKLVLLRGHVSWFQKKVPAFLDMNNLLRAAIRHKHINCVEYLLDECKVDINAKNAFGNNPIMFSMLKQDDTQDSGAMLKYLLKRGADPTGITFQGQNLLFNVARNAACNTVELFEMLLRNTYVDPRGEERTLNIGQRDTVGSTVLHHAVLFGNVQLVEYILKATHDRIDGIWTRANWIKTIDTFSSYNMSKDEHVTARNSWAARGLTSFAEHLSPLGVAILHNQGSLARLLMSI--DCGSGLDCRRRRTIFYDDNEDLRLLAKVWPSLIPALLQQFSVKTNQVANLGYKATRYIIHP--W----------FGHHNTPIYHTPLAVMLRFDGEDWNCLYNMRIIQVVITLKWQLFGKRYYYGALARYVFLVVTYIFGFIL--DVAPGT-PMSAGDAQV----GEIFRWFAWLSAFLLLLHEEFREMYHSKW--EYFMSAYNWLSLVGYTCILIMAPLAGEDYRENSD-----------DTSQRIFRAVAGVAILLRVLEFLSIHNTTGRLVAMLEKMMKDTLRWAGIFFVLVLAFTLSFNALLAPEENFENLASTMFTAFRFTIGEADPPFSTD 954
BLAST of mRNA_P-littoralis_Contig614.30.3 vs. uniprot
Match: C3YPH3_BRAFL (Ion_trans domain-containing protein n=3 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YPH3_BRAFL) HSP 1 Score: 62.8 bits (151), Expect = 8.130e-6 Identity = 91/388 (23.45%), Postives = 165/388 (42.53%), Query Frame = 1
Query: 2359 VVQMVVALKWSVFGRRYY----LWELGRYLFLAMSFIMGFVMWADAANWVGPLDSSDDRLAVVGGTVSRLLCWVLTLYN------LFVEEGREVAASKSIKKYLVGGWNLQSVTAYVLVLALIPV-FKPWQETVEWGSGPLEYTKADTVRRCLTAPAAIFLFTRLMEHLAMWKSTGIFIAVI-RMVIVDTASWSILFILFEAAFALAFYALLEGN--SGYETLWASTISIFVLSFGEFDLPFSENEVLNLTAVIMAVVFMLIVAIVYLNLLVAMMTNGYTEVVMMAAAQATMNRAAALVKWEGIMTDATRGKAFRK-----VAPDRGKRSHITLTGWFGGAPTEVFCNEEGARAIEPEQNSIFK-RVDTHAVIMKELGEIRNMLGKSA 3462
V+ ++ KW VFGRR + LW + +FL+ A ++ P DS + ++R + +L + N L V E R V +K L + + V ++ IP+ F E +W L A I + + + W TG F+ +I +M+ D A + I++ F FA AF+ + +++ + S +++F ++ GEFD P A ++ VVFM++V I+ LN+L+AMM+N + EVV + + +A +V E + ++ + FRK + PD H+ + G + EE + + + ++ V+ K+L + ++GK A
Sbjct: 385 VIGQLLEEKWKVFGRRTFGLQLLWLVLHLVFLS------------TAVYLRP-DSLELMAGTTASDIARYITEILIVINAVVFLLLEVNEIRMVGFMGLLKNILNVPDKVLFMIGCVCIVLCIPMRFAKLVEAEDW----------------LLGIAIIGSWFYIFFYCRGWTLTGPFVTMIYKMIAGDMARFGIIYCTFIITFAPAFWIMFRDKPTEKFDSEFGSLMTLFQMTLGEFDYPVFNLAEFPALAKLLFVVFMMLVPIMLLNMLIAMMSNTFQEVVDRSEREWRRQKAKIIVSLERSFSKSSL-QQFRKDYSIQLRPD--SAVHLPVEPGPHGLRALLVIKEEAMSRAKKKSGVVASWKMAMKRVLAKKLQQCSRVIGKHA 740
BLAST of mRNA_P-littoralis_Contig614.30.3 vs. uniprot
Match: A0A6P4ZTL0_BRABE (transient receptor potential cation channel subfamily V member 5-like n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4ZTL0_BRABE) HSP 1 Score: 62.0 bits (149), Expect = 1.400e-5 Identity = 75/287 (26.13%), Postives = 129/287 (44.95%), Query Frame = 1
Query: 2359 VVQMVVALKWSVFGRRYY----LWELGRYLFLAMSFIMGFVMWADAANWVGPLDSSDDRLAVVGGT----VSRLLCWVLTLYN------LFVEEGREVAASKSIKKYL-VGGWNLQSVTAYVLVLALIPVFKPWQETVEWGSGPLEYTKADTVRRCLTAPAAIFLFTRLMEHLAMWKSTGIFIAVI-RMVIVDTASWSILFILFEAAFALAFYALLEGN--SGYETLWASTISIFVLSFGEFDLPFSENEVLNLTAVIMAVVFMLIVAIVYLNLLVAMMTNGYTEVV 3165
V+ ++ KW VFGRR + LW + +FL+ A ++ P D + ++ GT ++R + +L + N L V E R V IK L V L + +VL + P+ +TK V L A + + + + W TG F+ +I +M+ D A + I+++ F FA AF+ + +++ + +++F ++ GEFD P A ++ VVFM++V I+ LN+L+AMM+N + EVV
Sbjct: 385 VIGQLLEEKWKVFGRRTFGLQLLWLVLHLVFLS------------TAVYLRP-----DNIQLITGTTASDIARYITEILIVINAIVFLLLEVNEIRMVGFMGLIKNILNVPDKVLFMIGCVCIVLCI----------------PMRFTKLVEVEDWLLGIAIVGSWFYIFFYCRGWTLTGPFVTMIYKMIAGDMARFGIIYLTFLITFAPAFWIMFRDKPTEKFDSEIGAVMTLFQMTLGEFDYPVFNLAEFPALAKLLFVVFMMLVPIMLLNMLIAMMSNTFQEVV 638
BLAST of mRNA_P-littoralis_Contig614.30.3 vs. uniprot
Match: A0A1W0A0Q7_9STRA (Inversin protein alternative isoform (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A0Q7_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 4.600e-5 Identity = 55/238 (23.11%), Postives = 114/238 (47.90%), Query Frame = 1
Query: 2545 VSRLLCWVLTLYNLFVEEGREVAASKSIKKYLVGGWNLQSVTAYVLVLALIPVFKPWQETVEWGSGPLEYTKADTVRR----CLTAPAAIFLFTRLMEHLAMWKSTGIFIAVIRMVIVDTASWSILFILFEAAFALAFYALLEGNSGYETLWASTISIFVLSFGEFDL--------PFSENEVLNLTAVIMAVVFMLIVAIVYLNLLVAMMTNGYTEVVMMAAAQATMNRAAALVKWE 3222
++ ++ W T + F E +E+ I+KY+ N + + L+L V+ P Q L++ V R C+ + L+ +++L + + G + ++ +++DT +SIL+ +F+ A+Y LL+G+ GYET+ S ++++ + FG+ P VL + A+ + + M + ++ LN+L+AMM N + + A +A + A +++ E
Sbjct: 870 LNNIVLW-FTAFYFFYWEYKELQGY-GIRKYMSSSVNAVQIIIFALILF---VYVPCQ---------LDFIPETIVVREYQLCMAGTICLALWILALQYLEVHGTAGYLLPMMHGLLLDTVRFSILYGVFQVGLTCAYYILLQGSDGYETMLNSFVTVYFVLFGQIQTDPISALLDPPHTKPVLYVFAMGLLMFHMAVAIVLLLNVLIAMMNNTLVDGLEKAKLEALASYAKCVLRLE 1093
BLAST of mRNA_P-littoralis_Contig614.30.3 vs. uniprot
Match: A0A067BYV8_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BYV8_SAPPC) HSP 1 Score: 59.3 bits (142), Expect = 9.580e-5 Identity = 57/249 (22.89%), Postives = 123/249 (49.40%), Query Frame = 1
Query: 2545 VSRLLCWVLTLYNLFVEEGREVAASKSIKKYLVGGWNLQSVTAYVLVLALIPVFKPWQETVEWGSGPLEYTKADTVRRCLTAPAAIFLFTRLMEHLAMWKSTGIFIAVIRMVIVDTASWSILFILFEAAFALAFYALLEGNSGYETLWASTISIFVLSFGEF------DLPFSENEVLNLTAVIMAVVFMLIVAIVYLNLLVAMMTNGYTEVVMMAAAQATMNRAAALVKWEGIMTDATRGKAFRKVAP 3273
++ ++ W Y F E +E+ ++KY+ N + ++L++ V+ P Q G P E + C++ + L+ +++L + + G + ++R +++D+ +SIL+ +F+ A+Y LL+G+ GYE++ + I+++ + FG+ DL S + VL++ + + + M I ++ LN+L+AMM N E + A +A + A +++ E + R + + P
Sbjct: 595 LNNIVLWGTAFY-FFYWEYKELQGY-GLRKYMSNAVNAVQILVFLLIML---VYVPCQ----LGFIP-ESVVVREYQLCMSGTICLALWILSLQYLEVHPTAGYLLPMMRGLLLDSVRFSILYGVFQVGLTCAYYILLQGSDGYESVLHTFITVYFVLFGQIQTGPIDDLA-STSPVLSIFSKGLLMFHMAIAIVLLLNVLIAMMNNTLVEGLEKAKLEALASYANCVLRLELSLDSRERTEMIYVIKP 832 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig614.30.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig614.30.3 >prot_P-littoralis_Contig614.30.3 ID=prot_P-littoralis_Contig614.30.3|Name=mRNA_P-littoralis_Contig614.30.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1369bp MSAAAVSRPMQGDVIIYQYPGLLGTLGRGLLHPRFLVLERGVLFVYASENback to top mRNA from alignment at P-littoralis_Contig614:112612..143931+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig614.30.3 ID=mRNA_P-littoralis_Contig614.30.3|Name=mRNA_P-littoralis_Contig614.30.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=31320bp|location=Sequence derived from alignment at P-littoralis_Contig614:112612..143931+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig614:112612..143931+ >mRNA_P-littoralis_Contig614.30.3 ID=mRNA_P-littoralis_Contig614.30.3|Name=mRNA_P-littoralis_Contig614.30.3|organism=Pylaiella littoralis U1_48|type=CDS|length=4107bp|location=Sequence derived from alignment at P-littoralis_Contig614:112612..143931+ (Pylaiella littoralis U1_48)back to top |