mRNA_P-littoralis_Contig614.1.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig614.1.1 vs. uniprot
Match: A0A6H5K9K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9K2_9PHAE) HSP 1 Score: 266 bits (681), Expect = 1.050e-79 Identity = 134/180 (74.44%), Postives = 149/180 (82.78%), Query Frame = 2
Query: 719 LNEYSEQDAAVEVRDEAVENLRAGPRDVALVKKSVAALLDQFPWLQSLWGMVMDLPPTKDMIMTSWNYLVDLLAAGRARKPTTRTASTFTLARFETWPDRLRSWINHGSVQEVARTRQGNQGTHYLCCIINLVDE------------ELYRVLVEEREKSNTVGLAYPTTIHKISPVRGR 1222
LN +S Q+AAVEVRD+AVENLRAGPRDVA VKK V A LD FPWLQS+WGM +D+PPT++MIMTSW YLVDLLAAGRARKPTTRTASTFTL+RFE WPDR+R+WINH SVQEVARTRQG+QGTHYL CIIN+VDE ELYRV +EEREKSNTV L Y T IHKIS RG+
Sbjct: 2 LNAHSGQEAAVEVRDDAVENLRAGPRDVAQVKKGVTAALDHFPWLQSIWGMGIDIPPTREMIMTSWKYLVDLLAAGRARKPTTRTASTFTLSRFEAWPDRIRTWINHESVQEVARTRQGDQGTHYLRCIINVVDECYGEGVKPISGQELYRVFMEEREKSNTVALTYLTEIHKISTARGK 181
BLAST of mRNA_P-littoralis_Contig614.1.1 vs. uniprot
Match: A0A6H5KW14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW14_9PHAE) HSP 1 Score: 130 bits (327), Expect = 2.980e-29 Identity = 60/65 (92.31%), Postives = 62/65 (95.38%), Query Frame = 3
Query: 1368 KDMVGEVDARNDPVNGAGLLFPTLAWYEFVFHAENGIYHFLRNPYFLGAYLGDLPAEILRVVTES 1562
+DMVGEVDARNDPVNGAGLLFPTLAWYEFVFH ENGIYHFLR+PYFLG YLGDL AEILRVVTES
Sbjct: 191 QDMVGEVDARNDPVNGAGLLFPTLAWYEFVFHVENGIYHFLRDPYFLGTYLGDLSAEILRVVTES 255
BLAST of mRNA_P-littoralis_Contig614.1.1 vs. uniprot
Match: A0A6H5K0V2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0V2_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 5.790e-20 Identity = 48/103 (46.60%), Postives = 66/103 (64.08%), Query Frame = 2
Query: 818 SVAALLDQF-PWLQSLWGMVMDLPPTKDMIMTSWNYLVDLLAAGRARKPTTRTASTFTLARFETWPDRLRSWINHGSVQEVARTRQGNQGTHYLCCIINLVDE 1123
SV LDQ W+ +W V L PT+++I+ SW L++LL + KP+TRTA+ FTL RF+TW RLR+WI H ++QEVA T +G+ L CI N +DE
Sbjct: 99 SVMNHLDQTCDWMLPMWEKVKTLQPTRELIVCSWGSLLNLLENEKKNKPSTRTATAFTLKRFDTWEKRLRAWIEHDAIQEVAHTEKGDAARRTLSCICNTIDE 201
BLAST of mRNA_P-littoralis_Contig614.1.1 vs. uniprot
Match: A0A6H5KKY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKY9_9PHAE) HSP 1 Score: 84.0 bits (206), Expect = 2.110e-14 Identity = 38/83 (45.78%), Postives = 58/83 (69.88%), Query Frame = 3
Query: 1314 AAQSFPLQCGRH*ERSNPKDMVGEVDARNDPVNGAGLLFPTLAWYEFVFHAENGIYHFLRNPYFLGAYLGDLPAEILRVVTES 1562
A++++ Q + S+ + +VD++ND NG+GLL+PT+ W EF + E GI+HFL+ P FL A LGDLPAEI++VV+E+
Sbjct: 45 ASKAWTHQRSHNLSVSSNTTLAAKVDSKNDMKNGSGLLYPTVEWVEFKYAVERGIFHFLKKPIFLAACLGDLPAEIVKVVSEA 127
BLAST of mRNA_P-littoralis_Contig614.1.1 vs. uniprot
Match: A0A6H5K201_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K201_9PHAE) HSP 1 Score: 85.1 bits (209), Expect = 7.910e-14 Identity = 38/65 (58.46%), Postives = 48/65 (73.85%), Query Frame = 3
Query: 1368 KDMVGEVDARNDPVNGAGLLFPTLAWYEFVFHAENGIYHFLRNPYFLGAYLGDLPAEILRVVTES 1562
+D V VD +ND NG GLL+PT+ W EFV+ E GI+HFL+NP FL A LG LPAEI +VV+E+
Sbjct: 233 RDFVAGVDQKNDLKNGPGLLYPTMDWVEFVYAVERGIFHFLKNPIFLAACLGGLPAEIFKVVSEA 297
BLAST of mRNA_P-littoralis_Contig614.1.1 vs. uniprot
Match: A0A6H5JA88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA88_9PHAE) HSP 1 Score: 78.6 bits (192), Expect = 1.290e-12 Identity = 39/64 (60.94%), Postives = 45/64 (70.31%), Query Frame = 3
Query: 1371 DMVGEVDARNDPVNGAGLLFPTLAWYEFVFHAENGIYHFLRNPYFLGAYLGDLPAEILRVVTES 1562
++V VD R D NGAGLLF +L +Y FV ENG YH L PY+LG YLGDLPA LRVV+ES
Sbjct: 163 NLVAGVDKRIDLKNGAGLLFVSLDFYNFVLMLENGYYHVLHQPYYLGPYLGDLPAGPLRVVSES 226
BLAST of mRNA_P-littoralis_Contig614.1.1 vs. uniprot
Match: D7FVM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVM7_ECTSI) HSP 1 Score: 79.3 bits (194), Expect = 2.390e-12 Identity = 36/63 (57.14%), Postives = 45/63 (71.43%), Query Frame = 3
Query: 1374 MVGEVDARNDPVNGAGLLFPTLAWYEFVFHAENGIYHFLRNPYFLGAYLGDLPAEILRVVTES 1562
+VGEV R+D +NGAGLLF T ++EF + E G +H L P+ LGAYLGDLP E LRVV E+
Sbjct: 254 LVGEVKRRHDEINGAGLLFATKVFFEFTYALEIGYFHILSKPFLLGAYLGDLPGETLRVVREA 316
BLAST of mRNA_P-littoralis_Contig614.1.1 vs. uniprot
Match: A0A6H5K7M3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7M3_9PHAE) HSP 1 Score: 64.3 bits (155), Expect = 1.770e-7 Identity = 30/65 (46.15%), Postives = 42/65 (64.62%), Query Frame = 3
Query: 1368 KDMVGEVDARNDPVNGAGLLFPTLAWYEFVFHAENGIYHFLRNPYFLGAYLGDLPAEILRVVTES 1562
+ + EV RNDP GL+F T + + + E+G +H L P FLG+YLG+LP EILR+V+ES
Sbjct: 261 RGVTEEVQRRNDPTRPRGLVFVTSLFLKLLLTLESGYFHVLSQPAFLGSYLGNLPEEILRLVSES 325 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig614.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig614.1.1 >prot_P-littoralis_Contig614.1.1 ID=prot_P-littoralis_Contig614.1.1|Name=mRNA_P-littoralis_Contig614.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=167bp MVMDLPPTKDMIMTSWNYLVDLLAAGRARKPTTRTASTFTLARFETWPDRback to top mRNA from alignment at P-littoralis_Contig614:105..4317+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig614.1.1 ID=mRNA_P-littoralis_Contig614.1.1|Name=mRNA_P-littoralis_Contig614.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4213bp|location=Sequence derived from alignment at P-littoralis_Contig614:105..4317+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig614:105..4317+ >mRNA_P-littoralis_Contig614.1.1 ID=mRNA_P-littoralis_Contig614.1.1|Name=mRNA_P-littoralis_Contig614.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=501bp|location=Sequence derived from alignment at P-littoralis_Contig614:105..4317+ (Pylaiella littoralis U1_48)back to top |