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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 278 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 240 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791279.5589964-CDS-P-littoralis_Contig614:167267..167462 | 1680791279.5589964-CDS-P-littoralis_Contig614:167267..167462 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig614 167268..167462 - |
| 1680791279.570745-CDS-P-littoralis_Contig614:175739..175784 | 1680791279.570745-CDS-P-littoralis_Contig614:175739..175784 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig614 175740..175784 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791279.5833404-UTR-P-littoralis_Contig614:175784..175821 | 1680791279.5833404-UTR-P-littoralis_Contig614:175784..175821 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig614 175785..175821 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig614.42.1 >prot_P-littoralis_Contig614.42.1 ID=prot_P-littoralis_Contig614.42.1|Name=mRNA_P-littoralis_Contig614.42.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=80bp
MQMVTGSTHGPEIDQNSTAGKVDQHQDAPPLLSRRAATADAVKPMIDTKD
PRRSNLGGANIFSSTNNGSTIAAAAATSTT back to topmRNA from alignment at P-littoralis_Contig614:167268..175821- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig614.42.1 ID=mRNA_P-littoralis_Contig614.42.1|Name=mRNA_P-littoralis_Contig614.42.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8554bp|location=Sequence derived from alignment at P-littoralis_Contig614:167268..175821- (Pylaiella littoralis U1_48)
AAGCTGATGAGGAGGGACCTCACCGCCGAAACATGTGATGCAAATGGTGA
CTGGCTCCACTCATGGGCCGGAAATCGATCAGGTGAACCCGAGAAACCTT
GCATCTAATCTAGCAGCCGAACCTTCCGAAGTACAAGTAGCCCAACCTCC
ATCCTCCTCCCCTCCGCTCAACAAGAGCAAACCAGGCCAATGATAGCGCC
CACCATGCACACGATGCAACCCACTCTGCCCCAACAACAGCAGACTTCAC
CACAATCCATGCATCAACAACCCAACTTGTCACAGCAGCAATCAATCGGA
CAAACTACTCCGTAAACATTGCTCCGATGCAGACCGTGCACTCTCAAGTT
GACCAATCTCAGCATGGATACCCTCACCCCGCGCACCCAGACCGCTTCAC
ACTGAAAACGATTGACCTCCCAGCATCTCTCAAGCTCGAAGGAATAGCTT
CAGAAGATGTACCTGAGTTGATGGCACTATACCGCGCCCACATTCGCTTG
CTCTCACCCGACACGACTTCGGATTCTACGATTGATCACCGCGCTATCAA
ACACCTAGCGCTATTCGTACGAGGAGCAGCAGCCCAAAGTTTGAGCTTAA
TACTGAGTTCGAATCTTGAGTGGAGACCAGAATCCACTCTTGCAGCGATG
CGTGCTCGAGGCGAACACATAATCGTTTCCTCCACAGACTTGGCATGACT
GGGTTACAGCATTTACGACTCTGTTCGCTCCGGCGAACCGCATCTCTCTC
CTCGCTCGCGATGTCATGACTCTACAAGCCAAGCCGAACGAATCGGTTGA
CATGTACGGTCTCCGAGTATCACAAGCATATTCACGACTGCTTGCTGAAG
CTCAAAGGACCACGCCCGTTGGAGTTACTGCGCACGAACATGCGTTCAAC
CAAGCGTTGATAGCATCTTTCGAAAACGGTCTCCAGCCCGCGTTGCGTGT
AGAAATGATAAGAGAGGATGCATCCCAATCTTTCATGGCTTCCAAAGCTC
GGGCACGAAAACATGAAGCAAACCAGCTGCGATCACCATCTCAAATTCCA
ACGGCTATCTCCGCCCTGCACGCTGATCCCCGTGACGCCCAGCTGAGCCA
GCGCTTGTCAGACGTCGAACAAGCACTCGCGGCTCGTTCGACTCCTACCA
CCGGCCAAACCGGCGGACAAGCTCGCACGGTCAGCTCGACGACCACACGG
ACCACGCAGCAGCGCGACAACAACCGCGGAAGATCGCAGACCCGCGAAAG
ATCGGCATCGAAGAGTCGTAAAGAGACACATAACAAATCAGTCTCTTTTG
CCGACAAGGTCAAGGGAACCAAGGAATGCACGTACTTGGCGTGCCAGAAT
TCAGAGAGGCGCTTCTCGCACACGATAGATGAATGTCGTATTGCGGCGAG
CCACAAGAAGGCTGGTCTCATTTTGAAGAAAGCGTAGGGGTGCCCGCGTC
GGCACAGTTCCTCTGCCAACACGGGACAACATTTGTCACTTGAGTCAGAA
ATTGATCTAGCAAGTCAAAGAGTCAAGGTAGACAAGAGGGATACTACACA
CAAAACTAGTGTGGCGTCCCTGGCGGAAGTAAAGCAGCAGTGCACAAATA
ATGCACGAGAGAAGCGTTCAGCAGAAGGGGTACTGGAAAAGAGTTCAGTA
GCTGTCGCATCATCATCAGTAGCGCGTAGCAGCAAGAAGGAAAGTGACAC
GTCAGGTCAAATACTGCCTGCCTTGTCGACTGCTGTAGCCAGGTTAGCGC
CACAGGCCCAATACGTAGCTACTGTTGATAGAAGGTCGAAGCACCGGTCG
AAAGTAATAGCCGGTATGCAGAATAATGACGAATTTGCCGCTTTCCACAT
GTCTTCGCTTGCTGGATACCCTACCTGTCCAGCAGTGCGCAACGCAACCT
CGATGAGAGTACGCGTTCCCGCCAGGGTAAATAATCACCCGGCCGGTCTA
ATAACAGTAGACACGGCGTGTGATATTCCGTGTGTTTCAAGAAAATTCAT
GCGAACTCACACAACTTTGAGGGAGACGGAAATATACCCCGTCCCTCCCG
GAGCAATCAACCTACGAAGTGCTGATGGCTCTCCCTGAAAATACAGGGAT
ATACCCGATTCGATCTTACACTGGGAGAAATTACCCTACCTGTTGAAGTA
CTAGTGTTGCCGTCGTTGGGTCCCGATAATATGTTACTTGATAATAGTAT
CATGGGAGCGTTCGGTGGAGTCTTGGATTGGCATGCAGAAGAATTGTCAT
TCAAGACATCAAAGTTTAAAATACCCGCCACCCATCGCAAAACAAGCAAC
CCTCTGACACAAGAATCAAATGAAATGAACTGCTCTGTAGTGGCAGTCAC
CGGCAACACTTCAGCAGTGCCTGTCTATCTCAGCAAACGATGCTGTATCC
CTGCACAACACGAAATCGCGGTAGAAATATATTCTCACGAAGCACCAACA
GAAACAACTGCTGCTCTCGTTGAACCGCGTATTGTCACAACAGATGACAT
AGGCAAGTCAGATACACCGACAGCCTTCCGCAGGATAGTGATAGCTCGCA
CCGTCTGTAATTGGACAGCTCATACGAAACAAGCAGTGGTACAAATTGCC
AACCCGTCCAATCGACAGGTATACCTTGAACGAAATACACTCGTCGGACA
CATCTCCCCAGTGAAATCAGTACTGCCACAAACTAACAGCAGTGTTGCAT
CGAGTCCAGAACAAACGAAGATAATTCGTGCTGAACTTCAACAGGCACTA
GCCAAAGCGTTCAGAGAAACTACTTTTTCACCAAGTCAATGTGAAGATAT
ACTACAACTGTGCACTAAATACCGCTCAGTGTTTTCGTTGACACCTGATG
AACTAGGGAAATGCACAATTACCGAAGCAGACTTTCCCTTGAACCAGGAA
CACGCCCAGTAAATCGAGCACCATACCGAGCTAACCCAAGAGTTCAAGAA
GTGATCGATAAATGTGTTGGTGAAATGGAGAAAGCGGGCATTGTCGAAAA
ACGAGCCAGCCCGTGGGGATCAGCTGTAACACTGGTAGCGAAAGCTGACG
GAACACCCCGATTTTGTGTTGATTTTAGAACGACGGTCAACAAGAATCTA
ATAAAGAAATCGTGGCCCATGCCTGAAATGGCGAGTCACATCGATACAGT
CGCAGGAGCGAAGTTTATTACCGTTTGCGACGTGCAGAGTGCGTATCACC
AAATACCTATTGCAGAAGCAGAACAAGATAAAACTGCTTTTGTAACACGA
AATGGAAAATGGGTTTTTAAACGACTACCTTTTGGCATTGCCAACGCCCC
TTTCCTTTTTCAGCGAACAATGGCATTAGCGTTTGCACACTTCGGACCGA
AATCTGGCCTCCTCGTATACATGGATGACCTTATTTGTTGTTCATCTACA
TGGGAAGGACATTTGAATCTACTGGAAAATACTTTCCAAGCTTTACAAGC
AGCAGGTCTCACCTTAAAACCATCCAAGGTGCAGTTCGGACCCGAAGAAG
TAAAATACTTGGGGCACATTCTCTCATCCAAAGGAATACGTTTGGGAGAT
GATCGGATTAAAGCAATAGTAGACTTGCCGAAGCCAACCAATATCAAAGA
ATTACGATCAGTTTTAGGCATGGTTAACTACGTCCGGAAGTTTATCCCTG
ACCTAGCTACCATTACTGAGCCCATGGTTGAACTCACAAAGAAAGAATCA
ATGAAGTATGTGGCTAAACGCTGGGGTCCGGAACACGATGAAGCGTTTGC
TGAGGTGAAAAAACGACTCACCCAAGCACCTGTTCTACACTTTCCGGACT
TCTCTAAAGGATTCGTCATCCACGTAGATGCCTCCGAGACAGGAGCAGGA
GCTTTCCTGGCGCAAAAGAATGGTAATGAAACCAATATTATTGCGTACTT
TAGCCAGCGATTCAACAAGAGTCAACGCCACTACTCAGCTTCAATGAAAG
AGTGCTTCGCTGTTGTTCTAGCAATACAACATTGGAGACCATACTTATGG
GGACGGCATTTTACATGCGTCACTGATCACGCGGCTTTACGGTACCTGTA
CACGATGCAGGATACGTCTAACATGCTCACACGATGGGCTATTGCACTCC
AATCATTCGATTTCACGGTACAACATAAACCAGGGCGCTTGCATATCGTA
CCAGACACACTATCGCGTCTTTTTGCATTCCAGACTGAACAGGATCGAAT
TGCGCCTTGTCTTGCTCCGATTTGTCGCAACGTGCCAGATGACCCCAAGT
TGCAAACAGACATACCTAACAGACCGTACCAAGTGTCCATCGACAAACTC
AGCGATGTGCAACCTGTCCGTAGCGACAGAGAGCTGTTTACCGTCAACTC
TGCTTTTGTCAGTGCCACACAGGTTTTCGACTCTGTTGATCAGGAAGTCT
TACGCGACAAACAAGCCGAAGAATATGGTGAATACGTCAGATATATTCTG
CGAAAGAAAGCACCACTACCGCACAACGAATCGACATCAACAATGTCATA
TTACTCCATACAAAATGGGCTTCTCTTCAAGTCTTATTTGCCTGGACACC
TCCGAAAACGAAGCACGTTTCGCGATCAGCTCGTACTACCACAAGCTCTC
ACCAGTCTTGTTATACATGCTTACCACGACCATGCTCTGTCAGGAGGTCA
CCTTGCATTTAGACCTACGTATGAGAAAATTCGGCAGAAATACTGGTGGC
CGTCAATGAATAAAGACATCCGCAACTGGTGTGAAGCATGCCAGGCTTGC
CAACGCAGAAAAACTGCACACCGCCGCCCAAAATTGCCCACAGGCAGTGT
ACCTGTACAACGCCCATTTGAACGGATCTCCGTAGACTTGGTAGAATACA
AATCACTATCAATGTCTGCCGCAGGTGTACAATGCAAATATGTGCTGTCC
ATGATGGATCACCTTACTCGTTTTGCAGTGTTAACACCCATTCCGAATAA
AGCTGCCGATACTGTAGCTAGAGCAATCATTGACAGGATTATCAGTGTTT
TTGGCCCACCTGAAATACTTCACTCGGACCAAGGCACCGAATTCGAAAAC
AAAGTCATTTATCAGTTGCAAACAATTCTGGGTTACAAGAAAACACGCAC
GACACCGTATCGACCTCAGGGAAATTCGGTATCGGAGCGGGTTCATTCTA
CTATGCATGCAATGCTTGCAATGCACAGTTCCATGAATCGTGACAACTGG
GCAGAACTCCTGCCGTTTGTGCAACTAGCGTACAACACGTCATTTAGCGC
ATCCATGCACGAGACTCCGTTTTTCTTGATGTTCGGTCGCCAAGCACGCC
TACCCGTCGATGTCATAATCGGAATTCCTCACGAAGGAACCACAGGAGAT
ACCGAACAATTTGCTCAAAGCACGCGAGATAACTTACAAATCGCATTTGA
GCTCGCACGCCAAAATCTCACAGAGCGCGCTGAAAAACATGCCGCAAACA
ATGCGAAGCTGAAAAACTATCCTGTTTTTGAACCAGGCCAACAAGTACTC
CTGTTCAAACCATACCAGGAATCAGATGGACCAAATCCGAAACTGCTATT
ACCCTGGCGAGGACCATACATTATTTGCTCGCAACTTTCCCCGGTTGTAT
ACAGAGTGAAAAAATTTGGTGACACACGAGAAACTTCCGTACACCTTGCC
CATTTGAAGCAGTACCACTCACGGCAGAAACCACCAGCCCCACAATTTGA
TAAACTGGCTGAATTTTTCTTGGGAAAACCTATACCGCTGCCGATAACAC
ACCAGTCTGACGAAAATCAACCGAGGATTGAAAGATACGTCGTAGACAGA
GTGGTAGGACATAAACATGGTCCAGGACGGAAGAGTCCGCACAACTACAA
ATACCGGTTACGTTTGAGAGGCTACGGACCCGAATCAGACTTAACTTACC
GAGCACACGAAGTCCCACAATGTCATGAACTCATTTCCGCATACAGATCA
CAACAGGGTCTGTCTGGCTCCTCCGAAGCGAAAATCGTACATACGGCACG
GAAAAGTGACGAAACGAATGATCCGAAATCGTCTGAATCGCAAATCAAAC
GAATGAAACGCAAACGAGACGAAAGCGGTAGTCATCAAGCGTCCGAATCT
CAACCAAAGCCAACGAAACGCAAAAGAAACGGACAACGTCAGCAACGCAA
ACAAGCCACAACCAAAACGCAAGGCGATACCACTGAAACAATGAAGAAAG
ACGTGAACAAAACTAGCCAAGCGTTAAATACCGTGGATAAGTTGCGGAAG
AGTAAAAGAGGACGAAAGGCAAACTTGCGATATGTATCACGAATACACGC
ACGGTGAAAAGGGATAGCACCCCACTGGGCTATCCCAGCATTTGTTGGGT
CAAATGCTGGCGAGGAAATGTCAAGTTATACTGGTCTCTAGGTTGGTTGT
TTGTCGCGATCGATCAAACTTATTATGAGCCACAATAACACTATGACTGT
TAAATCACCGTATGCCTATACTTCACAGCTAACTAATACTTTAGCTGACC
CAGCGGTACGATCCACGAGATCTAATCCGAAGAGAGTTGAAAACACTTGC
ACGACAAGTTAACTTTCGACCGTCTCATGAAGACACAATTCTGCTTGAGC
CGGGTAGACGGCGCAAGGACACCCACGAAGGATGTCGAGTTGGTAACAAA
CTATATAACTCCAGAAATCTATCACGTATGATCTCTGAAGTGTTTTATCC
GTACGCTGTATCACGTGTGTTTTCCACACGGCAGTGTAGCTATCTTCGGG
TAGTGAGGAAGGGATATTCACAGAAGAGCTGGAACTGTACAACTAGGATA
TGCAACCATGTTACCACTAGTCCCTCATCATTCATCAAGACCATGAATGA
CCGCCAAAATACCATTAAAAGAAAGATGGATTTTCGGCGACAAAAGAGGG
GGGTCCTGTGGATACCATGGATTTGCATCTTCCTAGGGAATACAGGAACG
CATACATAACGGACAGATTAGGAGATCTACCGGACAAATATAATATCCCA
CGATCTCCGGACCCTGGACACAGAGAATCTGGAAATGAAATTGCGACCAT
GACCGGATTCGTGGGGTCAAGGAAGGTCCACGATGGCTTCCCTTGACACA
CTCTCTCTACCTAGCCCTGATCGAGCTCAGCTCGGCCATCGCTTGACATT
CCTCGTCACACTGCAACGAGAGGAAACATTAGCCCACCTACGGTAACGGG
TTATAAAAGTTACCACGTCACGGGACCTTACTGTAGCGAGTAGAGGCCTT
CCCACATAAGGTGAGATGTCAAAATAGACACACACGATGTTGTACTGTAC
GAAAAAATGTGCTGAACGCGTCACAACGTGCAAGCTCAAACGAAAACAAG
ATTTTGCCAGCGTGTTTCTCGAAGTCGATAGCCGCATTGAAGAGCTGTTG
ACACGCGCGGGCACAGCTTGCTTTCGACGGCCAAAGTGCAGTTTATTATG
TTGAGGAAGTCACAAAGTCAGATGATAATCTAGAAAAAAACCTGTAGCAC
ACAGACCACGGTTGGTTGAAAATGTGCACAAGACCATATAGATCACGCAG
ATCACCATGCATGATCTTCGACCGATCATGATTGACTCCCTTCATCTGAC
TGTCCCACGTATGAAATAGACTTGCCGCTCGAACCAGTACTCCGTTTGAG
TGCGGTAGTCAACCAAAGTCGTCATGACGAGTAAACGATTAAGGGCTGCA
TACACTTTGCTTGGAGTTGAAATTCGTTTGAATATGATCATGTTTTTTCA
GCCGGTGGATACAAATCAGTTTGGAGCCTGCAGGGAAACCTCCAAGATGC
ACTCTGCAAGGAAGCTCGCTGAAGTTGTCCAACAAATAGGCGTACAGTCT
CCACCACATTGTGTGCCCTATGCATACTTCGAGAAAGAAAACGATTTGGC
ATGACATGGCCCCCTACATATTGACGCGAGGGCCGCTTTGCCGCGCTCAA
CAATTCTGTATCATTCGGCGTTTAGAGCGGGAATCAACAGCACTCACCAG
ACTATCCAATGAGGTCGAACACTAGGTGGTTGAAAAAAATCTCTACAGGG
CTACACCCGGACGTTGGCTATATATCATGGCGGTGTATCGGGTTGAAACT
CCCGCCCTTCATCCCCAGTATACCGCCTTGCTTGTTGGATGCGAGAAAAA
TTCGTTTACAACATGTTCAGGACGGATCATGTGTATCGTCAGCAAGCTGC
ATGCTGCATAAGATCGCGACTAATCATTCGCTAGATGATTGCATGGAATT
TTTACGATGGTTCCCCCATCCCTTGCCGTTGCCTTATCGTATCTCTTATC
TGCCCGTACGGACCGCCTTCCCACCCCCTGAACCCGCTTTCAAACCAATT
AAAACTTAGAACTCGACGGCAGGGAAAGTTGACCAGCACCAGGATGCACC
GCCATTGCTATCAAGACGGGCAGCCACCGCTGATGCAGTGAAACCGATGA
TCGACACCAAAGACCCGCGCCGTTCCAACCTAGGAGGTGCCAATATCTTC
TCCAGCACGAACAACGGTAGCACCATTGCCGCTGCTGCTGCCACCTCCAC
CACC back to topCoding sequence (CDS) from alignment at P-littoralis_Contig614:167268..175821- >mRNA_P-littoralis_Contig614.42.1 ID=mRNA_P-littoralis_Contig614.42.1|Name=mRNA_P-littoralis_Contig614.42.1|organism=Pylaiella littoralis U1_48|type=CDS|length=240bp|location=Sequence derived from alignment at P-littoralis_Contig614:167268..175821- (Pylaiella littoralis U1_48)
ATGCAAATGGTGACTGGCTCCACTCATGGGCCGGAAATCGATCAGAACTC
GACGGCAGGGAAAGTTGACCAGCACCAGGATGCACCGCCATTGCTATCAA
GACGGGCAGCCACCGCTGATGCAGTGAAACCGATGATCGACACCAAAGAC
CCGCGCCGTTCCAACCTAGGAGGTGCCAATATCTTCTCCAGCACGAACAA
CGGTAGCACCATTGCCGCTGCTGCTGCCACCTCCACCACC back to top
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