prot_P-littoralis_Contig613.45.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig613.45.1
Unique Nameprot_P-littoralis_Contig613.45.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length397
Homology
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BLAST of mRNA_P-littoralis_Contig613.45.1 vs. uniprot
Match: D7G8N9_ECTSI (Myb-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8N9_ECTSI)

HSP 1 Score: 359 bits (922), Expect = 2.850e-119
Identity = 185/225 (82.22%), Postives = 198/225 (88.00%), Query Frame = 0 
Query:  176 GAARAAPGGWGAAA-GSFASDFEWEGAEGASWTEFEDWLVQDTYSRYVIGSGKHVLWRRMVREVPELMERTPQEARQRWLRLTGRL---GGEGGRGEDGGHKVPGSPALDVFYVQPPVLEQWEEIVEGEGMGSFRGNVFGQRGLADGTAMTTAPVDVSGRKIQDQYVATQCGVVYELGERRETDLVAKASSKMLKIAPATVLALAGAFYAFTALSHHVQVEVFVI 396
            GA     G WG AA G+ A +FEWEG   A+WTEFEDWL+QDTYSRY IGSGKHVLWRRMVREVPELMERTPQEAR+RWLRLTGRL   G EGG   + G  + GSPALD FY+QPPVLEQWEEIVEGEGMGSFRGNVFGQRGLADGTAMTTAP+D+SGRKIQDQYVATQCGVVYELGERRETDLV++ASSKMLKIAPATVLALAGAFYA TALSHH+QVEVFVI
Sbjct:  137 GATAVRVGKWGEAAEGNLAGEFEWEGGAEAAWTEFEDWLLQDTYSRYAIGSGKHVLWRRMVREVPELMERTPQEARERWLRLTGRLSAGGAEGGSRRERGEVMAGSPALDNFYIQPPVLEQWEEIVEGEGMGSFRGNVFGQRGLADGTAMTTAPIDISGRKIQDQYVATQCGVVYELGERRETDLVSQASSKMLKIAPATVLALAGAFYALTALSHHIQVEVFVI 361
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BLAST of mRNA_P-littoralis_Contig613.45.1 vs. uniprot
Match: A0A836CN06_9STRA (Myb-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN06_9STRA)

HSP 1 Score: 194 bits (492), Expect = 2.120e-56
Identity = 104/207 (50.24%), Postives = 131/207 (63.29%), Query Frame = 0 
Query:  206 WTEFEDWLVQDTYSRYVIGSGKHVLWRRMVREVPELMERTPQEARQRWLRLTGRLGGEGGRGEDGGHKVP----------GSPALDVFYVQPPVLEQWEEIVEGEGMGSFRGNVFGQRGLADGTAMTTAPVDVSGRKIQDQYVATQCGVVYELGERRETD------LVAKASSKMLKIAPATVLALAGAFYAFTALSHHVQVEVFVI 396
            WTEFEDWL+QDT++RY IGSGKHVLW RMV EVPEL+ RTPQEAR+RWL +TGRL  +   G                  G+P ++ FY+QPP+L  WEE+ +G    SF G+V G  GLADG  + T  VD++GR++ DQYV T+CG V+ELG RR  D       +A  +S     AP   LA A A    T L+HHVQ+EVFV+
Sbjct:   26 WTEFEDWLLQDTFARYAIGSGKHVLWNRMVTEVPELIGRTPQEARRRWLHITGRLTDQRQGGXXXXXXXXXXXXXXXGSSGAPDVETFYLQPPLLHDWEELEDG----SFEGSVEGMGGLADGVLVRTRGVDLAGRRVADQYVRTECGAVFELGARRGADDDAATTALAPVASAFAAAAPLLALASAAAVLGATVLTHHVQLEVFVV 228
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig613.45.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8N9_ECTSI2.850e-11982.22Myb-like domain-containing protein n=2 Tax=Ectocar... [more]
A0A836CN06_9STRA2.120e-5650.24Myb-like domain-containing protein n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..161
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 205..257
score: 6.376615

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig613contigP-littoralis_Contig613:168883..175654 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig613.45.1mRNA_P-littoralis_Contig613.45.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig613 168701..176413 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig613.45.1 ID=prot_P-littoralis_Contig613.45.1|Name=mRNA_P-littoralis_Contig613.45.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=397bp
MSWKRPRCLLVMVFVTCPGDVPLAAGFVPPIAAPALLRLPRGCHHPSSSS
YEVEQLSSRLTGRCRHGSIAAPSAAVAAHTRLFTAPNNCNYRVRRTIPTC
TAAASSSSSDDNLPGTGGEGTAAAGSTSAAASSSPSAVITAAEEGNEQKG
GGEAVGSTSNPEAGLIDPFVVAPGAGAARAAPGGWGAAAGSFASDFEWEG
AEGASWTEFEDWLVQDTYSRYVIGSGKHVLWRRMVREVPELMERTPQEAR
QRWLRLTGRLGGEGGRGEDGGHKVPGSPALDVFYVQPPVLEQWEEIVEGE
GMGSFRGNVFGQRGLADGTAMTTAPVDVSGRKIQDQYVATQCGVVYELGE
RRETDLVAKASSKMLKIAPATVLALAGAFYAFTALSHHVQVEVFVI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb