prot_P-littoralis_Contig116.54.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig116.54.1
Unique Nameprot_P-littoralis_Contig116.54.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length471
Homology
BLAST of mRNA_P-littoralis_Contig116.54.1 vs. uniprot
Match: D7FWN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWN7_ECTSI)

HSP 1 Score: 227 bits (578), Expect = 1.680e-65
Identity = 214/498 (42.97%), Postives = 248/498 (49.80%), Query Frame = 0
Query:    1 MDIGTSWRRKRPKEDEEEYLASKRYISEKFFNMRISHPAIPRMHGAGV---------GQVAVGEAAAE--IESNTMSDEESLPARTSLKPTATC---FDNDGGLTDPNFLDEDDADIXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGPPTPHPFVRSASSAVDEKLDDWVRTSRHRMLADASVNSAPDLCRALILYKPVTALAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSGXXXXXXTAPSAAAAAELRVMAAEFRAMAARGLESISTQSAGSSTAEATGFTGGGKRTTGQSHVYVNGVMN----DHAHDRHHHHR----VAGSLFGRLPRGLCTAESGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRDDGDVGRGRAPVPASVDAMDIDAAG-DEGAGRAGGARGLASLESRLSG----PP---VLTREGTSRGAPTLGLTAENVLSARTATQRTSQGRGQHSDHVAGGSSSARPPLTAQAWA 468
            MD+ TSWRRKRP E+EE+Y+ASKRYISEKFFNMRISHP  P +HGAG+           V  G+ AAE  ++ ++MSDEE +   T  +P A     F       +   LDED                 XXXXXXXXXXXXXX   PPTPHPF+RS SSA+DEK+DDWVRTSRHRMLADAS+NSAPDLCRALI Y+PV  L  S                             XXXXX   XXXXXX            ++         RG E    QSAGSSTAEA GF G G RT G S             D    R H H     VAGSLFG  PRGLCTA+SGGD                             RDD           A++   D DA G  +G   A  A         + G    PP    L+R G+SRGAPT  LT E    AR A QR  + RG+       G+++ARPPLTAQ+WA
Sbjct:    1 MDVDTSWRRKRPAEEEEDYMASKRYISEKFFNMRISHPDAPGLHGAGLMWQGAADKAAGVGTGDLAAEAGVDCSSMSDEEDISTATGQRPPAAAPSVFSEGAAFGNLASLDEDXX---------------XXXXXXXXXXXXXXXXXPPTPHPFLRSTSSAIDEKVDDWVRTSRHRMLADASINSAPDLCRALIPYQPVAGLMPSAAPAADSTGDEEGRTSGYDNGEAGGDPTPXXXXXXXXXXXXXXXXXXXXXXXXAVMLGG------GRGCE----QSAGSSTAEAAGFAGAGGRTGGHSXXXXXXXXXXXXXDQGKGRKHLHXXXXDVAGSLFGPPPRGLCTAQSGGDDAGGALMM---------------------RDDSXXXXXXXDSEAAMRLRDGDAGGRGDGTLTAAAAXXXXXXXMDMDGTDMAPPDAIPLSRIGSSRGAPTPELTPERAAWARAAPQRRREARGEEDPDEIAGATNARPPLTAQSWA 452          
BLAST of mRNA_P-littoralis_Contig116.54.1 vs. uniprot
Match: A0A6H5KNS1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNS1_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 3.130e-52
Identity = 209/494 (42.31%), Postives = 239/494 (48.38%), Query Frame = 0
Query:    1 MDIGTSWRRKRPKEDEEEYLASKRYISEKFFNMRISHPAIPRMHGAGV---------GQVAVGEAAAEIESNTMSDEESLPARTSLKPTATC---FDNDGGLTDPNFLDEDDADIXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGPPTPHPFVRSASSAVDEKLDDWVRTSRHRMLADASVNSAPDLCRALILYKPVTAL----AASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSGXXXXXXTAPSAAAAAELRVMAAEFRAMAARGLESISTQSAGSSTAEATGFTGGGKRTTGQSHVYVN----GVMNDHAHDRHHHHRVAGSLFGRLPRGLCTAESGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXTR-DDGDVGRGR-----APVPASVDAMDIDAAGDEGAGRAGGARGLASLESRLSGPPVLTREGTSRGAPTLGLTAENVLSARTATQRTSQGRGQHSDHVAGGSSSARPPLTAQAWA 468
            MD+ TSWRRKRP E+EE+YLASKRYISEKFFNMRISHP  P +  AG+           V  G+ AA ++ ++MSDEE +   T  +P A     F       D   LDED                 XXXXXXXXXXXXXX   PPTPHPF+RS SSA+DEK+DDWVRTSRHRMLADASVNSAPDLCRALI Y+P+  L    A +                          XXXXXXXX   XXXXXX       A  LR           RG E    QSAGSSTAEA GF G G R  G  H Y N    G  +D    R+H                        XXXXXXXXX                    R  DGD G        A   AS DAMD+D                   +     P  L+R G+SRGAPT  LT E    AR A QR  + R +       G+++A PPLTAQ+WA
Sbjct:    1 MDVDTSWRRKRPAEEEEDYLASKRYISEKFFNMRISHPDAPGLKEAGLMWQGAADKPAGVGSGDLAAGVDCSSMSDEEDISTATVRRPPAAAPNVFTQSAAFGDLASLDEDXX---------------XXXXXXXXXXXXXXXXXPPTPHPFLRSTSSAIDEKVDDWVRTSRHRMLADASVNSAPDLCRALIPYQPLAGLMPLAAPAADSTGDEEGRASDYDSGEAGGDPTPSXXXXXXXXXXXXXXXXXXXXXXLGAVMLR---------GERGCE----QSAGSSTAEAAGFAGAGGRAGGHLHGYANANGVGGGSDQGKGRNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMMCDDSGTASMREDSEAAMRLQDGDAGEWEDGALPAAAAASADAMDMD-----------------GTDMAPPDPIPLSRIGSSRGAPTPELTPERAAWARAAPQRKREARSEEDPDEIFGATNATPPLTAQSWA 449          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig116.54.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FWN7_ECTSI1.680e-6542.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KNS1_9PHAE3.130e-5242.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..109
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..242
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 350..470
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 428..462

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig116contigP-littoralis_Contig116:184039..190159 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig116.54.1mRNA_P-littoralis_Contig116.54.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig116 184002..191631 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig116.54.1 ID=prot_P-littoralis_Contig116.54.1|Name=mRNA_P-littoralis_Contig116.54.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=471bp
MDIGTSWRRKRPKEDEEEYLASKRYISEKFFNMRISHPAIPRMHGAGVGQ
VAVGEAAAEIESNTMSDEESLPARTSLKPTATCFDNDGGLTDPNFLDEDD
ADIAEASTASRAEAGAAGAAAAGAAAAASASGGPPTPHPFVRSASSAVDE
KLDDWVRTSRHRMLADASVNSAPDLCRALILYKPVTALAASASGGAAPAE
GGGGPASADSDDDDGEGGGDPTPSPQSGGDGGGETAPSAAAAAELRVMAA
EFRAMAARGLESISTQSAGSSTAEATGFTGGGKRTTGQSHVYVNGVMNDH
AHDRHHHHRVAGSLFGRLPRGLCTAESGGDDAGGTTLLRDETSAAMLMAG
EDGGAMMTTRDDGDVGRGRAPVPASVDAMDIDAAGDEGAGRAGGARGLAS
LESRLSGPPVLTREGTSRGAPTLGLTAENVLSARTATQRTSQGRGQHSDH
VAGGSSSARPPLTAQAWAHW*
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