mRNA_P-littoralis_Contig613.35.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig613.35.2 vs. uniprot
Match: D7G8N5_ECTSI (Methylcrotonoyl-CoA carboxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8N5_ECTSI) HSP 1 Score: 885 bits (2287), Expect = 2.800e-314 Identity = 468/599 (78.13%), Postives = 502/599 (83.81%), Query Frame = 2
Query: 302 MSRVAARRAAAAARGHVISSSPPSLRFPTLRGALDVPAETALKSKEAMAEMVDKLRSKLKMVEAGGGDVASKRHKGRGKLLARERIEALVDPATPFLELAPLAGYEASDRGGDDGGIMCGGVVAGIGRVEGLECMIVANDATVKGGTYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQAEVFPDKDHFGRIFFNQANMSAEGIPQIAVVMGVCTAGGAYVPAMSDESVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAEDDEHAISITRSIIANLNLGTITNPAAAVEA-------------------DGDGPAAVAPQQWDEPLFDPREMGSIIPTDPKKPFDVRKVIARLLDGSRFHEFKERYGPTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGIPIIFLQNVTGFMVGKRYEHQGIAKDGAKLVTAVSCAKVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGAEQAANVLAQVETDKRERRGEKLREDEEAKIKDPILEKFERESSAYYSSSRLWDDGVIEPADTRKVLGLSLRVATKDAAPPTSFGVFRM 2041
MSR+A R A AAARG+ SS +RFP L G LDVPA+TAL+S+ AM EMVD+LRS L VEAGGGD+A KRH +GKLLARERIEA+VDP +PFLELAPLAGY D GI+ GG VAGIGRVEG+ECMI+ANDAT+KGGTY+PITVKKHLRAQEVA+ENRLPCIY+VDSGGAFLPKQAEVFPDK+HFGRIFFNQANMSA GIPQ+AVVMG+CTAGGAYVPAMSDE+VIVNGTGTVFLAGPP + G+D R+SGVADHFAEDDE AISI RSI+AN NL + TNP+ V A G A QQWDEPLFDPREMGSIIPTD KKPFDVRKVIARL+DGSRFHEFKERYG TMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGIPIIFLQN+TGFMVGKRYEHQGIAKDGAKLV AVSCAKVPKITCVIGGSYGAGNYGMCGR+YSPRFLFMWPNARISVMG EQAANVLAQVE DKRER GE L E+EEAKIKDPIL KFERESS YYSSSRLWDDGVI+PADTRKVLGL+L VATKDAAPPTSFGVFRM
Sbjct: 1 MSRLA-RGARAAARGYASSS----MRFPKLNGDLDVPAKTALESRLAMQEMVDELRSALATVEAGGGDLARKRHSAKGKLLARERIEAIVDPGSPFLELAPLAGY--------DEGIISGGAVAGIGRVEGVECMILANDATIKGGTYYPITVKKHLRAQEVAQENRLPCIYLVDSGGAFLPKQAEVFPDKEHFGRIFFNQANMSAAGIPQVAVVMGICTAGGAYVPAMSDETVIVNGTGTVFLAGPPTRQ-------------GSD---RLSGVADHFAEDDEDAISIARSIVANFNLPSATNPSQRVAAMNAAXXXXXXXXXXXXXXXXXXGATTAAEQQWDEPLFDPREMGSIIPTDSKKPFDVRKVIARLVDGSRFHEFKERYGTTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGIPIIFLQNITGFMVGKRYEHQGIAKDGAKLVAAVSCAKVPKITCVIGGSYGAGNYGMCGRAYSPRFLFMWPNARISVMGGEQAANVLAQVEKDKRERSGETLGEEEEAKIKDPILNKFERESSPYYSSSRLWDDGVIDPADTRKVLGLTLHVATKDAAPPTSFGVFRM 570
BLAST of mRNA_P-littoralis_Contig613.35.2 vs. uniprot
Match: A0A835Z7I2_9STRA (Methylcrotonoyl-CoA carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7I2_9STRA) HSP 1 Score: 742 bits (1916), Expect = 6.120e-259 Identity = 373/533 (69.98%), Postives = 437/533 (81.99%), Query Frame = 2
Query: 443 MAEMVDKLRSKLKMVEAGGGDVASKRHKGRGKLLARERIEALVDPATPFLELAPLAGYEASDRGGDDGGIMCGGVVAGIGRVEGLECMIVANDATVKGGTYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQAEVFPDKDHFGRIFFNQANMSAEGIPQIAVVMGVCTAGGAYVPAMSDESVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAEDDEHAISITRSIIANLNLGTITNPAAAVEADGDGPAAVAPQQWDEPLFDPREMGSIIPTDPKKPFDVRKVIARLLDGSRFHEFKERYGPTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGIPIIFLQNVTGFMVGKRYEHQGIAKDGAKLVTAVSCAKVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGAEQAANVLAQVETDKRERRGEKLREDEEAKIKDPILEKFERESSAYYSSSRLWDDGVIEPADTRKVLGLSLRVATKDAAPPTSFGVFRM 2041
M +V L +L GGG+ A +RHKGRGKLLARERIEA++D TPFLEL+PLAG + S G DD + GGVV G+G V G++C+IVANDATVKGGTY+PITVKKHLRAQEVA N LPC+Y+VDSGGAFLP QA+VFPD+DHFGRIF+NQANMSA G+PQ+AVVMG CTAGGAYVPAMSDE+VIV GTGT+FL GPPLV+AATGE ++AE+LGGAD H +SGVADH+AEDD HA+ I R I+A LN P AA AA A +DEPL+ P +MG+++P DPK+PFDVRKV+AR+LDGSRF EFK R+G T+VTGFGHLYGQ VGIVANNGVLFSESALKAAHFVELCCQRG+P++FLQN+TGFMVG+++E++GIAK GAK+VTAV+CAKVPKITCVIGGSYGAGNYGMCGRS SPRFLFMWPNARI VMGAEQAANVL QVE DKR +G L +EEA +K P+L + ESSAYYSS+RLWDDGVI+P DTR+VLG+S+ A + PT FGVFRM
Sbjct: 1 MDALVADLNRRLAKAMQGGGEAAIRRHKGRGKLLARERIEAVLDAGTPFLELSPLAGGD-SMYGKDD--VAAGGVVTGVGVVSGVKCVIVANDATVKGGTYYPITVKKHLRAQEVALANALPCLYLVDSGGAFLPMQADVFPDRDHFGRIFYNQANMSAAGVPQVAVVMGSCTAGGAYVPAMSDETVIVRGTGTIFLGGPPLVKAATGEEVAAEDLGGADVHCSISGVADHYAEDDAHALEIARGIVAGLNA-----PGAA--------AASAAAAYDEPLYGPHDMGAVVPVDPKRPFDVRKVLARVLDGSRFSEFKARFGTTIVTGFGHLYGQQVGIVANNGVLFSESALKAAHFVELCCQRGVPLVFLQNITGFMVGRKHENEGIAKHGAKMVTAVACAKVPKITCVIGGSYGAGNYGMCGRSMSPRFLFMWPNARIGVMGAEQAANVLTQVEKDKRAAKGLALSPEEEAAMKAPLLSRLGAESSAYYSSARLWDDGVIDPRDTRRVLGMSVAAAMQAPPEPTKFGVFRM 517
BLAST of mRNA_P-littoralis_Contig613.35.2 vs. uniprot
Match: A0A8K1CHG8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHG8_PYTOL) HSP 1 Score: 725 bits (1871), Expect = 2.880e-251 Identity = 365/551 (66.24%), Postives = 432/551 (78.40%), Query Frame = 2
Query: 389 LRGALDVPAETALKSKEAMAEMVDKLRSKLKMVEAGGGDVASKRHKGRGKLLARERIEALVDPATPFLELAPLAGYEASDRGGDDGGIMCGGVVAGIGRVEGLECMIVANDATVKGGTYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQAEVFPDKDHFGRIFFNQANMSAEGIPQIAVVMGVCTAGGAYVPAMSDESVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAEDDEHAISITRSIIANLNLGTITNPAAAVEADGDGPAAVAPQQWDEPLFDPREMGSIIPTDPKKPFDVRKVIARLLDGSRFHEFKERYGPTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGIPIIFLQNVTGFMVGKRYEHQGIAKDGAKLVTAVSCAKVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGAEQAANVLAQVETDKRERRGEKLREDEEAKIKDPILEKFERESSAYYSSSRLWDDGVIEPADTRKVLGLSLRVATKDAAPPTSFGVFRM 2041
L G L+ +E +S M + +LRS++ V GGG+ A +RH RGKLL R+RI++L+DP +PFLE+APLA Y+ GGD + G+V GIGRV G+ECMI+ NDATVKGGTYFP+TVKKHLRAQE+A ENRLPCIY+VDSGGAFLP QAE+FPD+DHFGR FFNQANMSA+GIPQIAVVMG CTAGGAYVPAM DESVIV GTVFL GPPLV+AATGEV++ EELGGAD H R SGV DH A +D HA+ ITR I++NLN +P AV +EPL+ P E+G IIP D +KPFDVRKVIAR++DGS+F EFK+ YG T+VTGF LYG VGI+ANNG+LFSES++KAAHF+ELC QRGIP++FLQN+TGFMVGK+ EH GIAKDGAKLVTAVSCAKVPKITC+IGGSYGAGNYGMCGR++SPRFL+MWPNARISVMG EQAA VLAQV+ D ER G+ ++EE K P LEK+E ESSAYYS++RLWDDG+I+P DTRK+LGLSL A + T FGVFRM
Sbjct: 41 LDGKLNTKSEQFQESMAHMEALTQELRSRIAKVRLGGGEKARERHMSRGKLLVRDRIDSLLDPGSPFLEIAPLAAYDM--YGGD---VPAAGIVTGIGRVNGIECMILGNDATVKGGTYFPLTVKKHLRAQEIAMENRLPCIYLVDSGGAFLPLQAEIFPDRDHFGREFFNQANMSAQGIPQIAVVMGSCTAGGAYVPAMCDESVIVQKNGTVFLGGPPLVKAATGEVVTPEELGGADVHCRTSGVTDHLAHNDHHALEITRRIVSNLNYQK--HP------------AVTQVPIEEPLYSPEELGGIIPVDSRKPFDVRKVIARIVDGSKFDEFKQHYGTTIVTGFARLYGNPVGIIANNGILFSESSVKAAHFIELCTQRGIPLLFLQNITGFMVGKKAEHGGIAKDGAKLVTAVSCAKVPKITCIIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAAGVLAQVQRDNIERAGKTWSQEEEDAFKKPTLEKYEHESSAYYSTARLWDDGIIDPKDTRKILGLSLSAALNEEPKETKFGVFRM 572
BLAST of mRNA_P-littoralis_Contig613.35.2 vs. uniprot
Match: A0A024TF50_9STRA (Methylcrotonoyl-CoA carboxylase n=10 Tax=Aphanomyces TaxID=100860 RepID=A0A024TF50_9STRA) HSP 1 Score: 723 bits (1865), Expect = 1.680e-250 Identity = 360/551 (65.34%), Postives = 435/551 (78.95%), Query Frame = 2
Query: 389 LRGALDVPAETALKSKEAMAEMVDKLRSKLKMVEAGGGDVASKRHKGRGKLLARERIEALVDPATPFLELAPLAGYEASDRGGDDGGIMCGGVVAGIGRVEGLECMIVANDATVKGGTYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQAEVFPDKDHFGRIFFNQANMSAEGIPQIAVVMGVCTAGGAYVPAMSDESVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAEDDEHAISITRSIIANLNLGTITNPAAAVEADGDGPAAVAPQQWDEPLFDPREMGSIIPTDPKKPFDVRKVIARLLDGSRFHEFKERYGPTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGIPIIFLQNVTGFMVGKRYEHQGIAKDGAKLVTAVSCAKVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGAEQAANVLAQVETDKRERRGEKLREDEEAKIKDPILEKFERESSAYYSSSRLWDDGVIEPADTRKVLGLSLRVATKDAAPPTSFGVFRM 2041
L G ++ ++ ++S E M + +L+++L +V GGG+ A +H RGKLLAR+RI++LVDP + FLEL+PLA A D G + G++ GIGR+ G+ECMI+ANDATVKGGTYFP+TVKKHLRAQE+ARENRLPCIYMVDSGGA+LP QAE+FPDK+HFGR F+NQANMSA GIPQIAVVMG CTAGGAYVPAMSDESVIV G GTVFL GPPLV+AATGEV++AEELGGAD H R SGV DH A++D HAI I R I++NLN + N + +EP+FDP E+G IIP D +KPFDVRKVIAR++DGS+F EFK+ YG T+VTGF LYG+ +GI+ANNG+LFSES++KAAHF+ELCCQR IP++FLQN+TGFMVGK+ EH GIAKDGAKLVTAVSCA VPK+TC+IGGSYGAGNYGMCGR++SPRFL+MWPNA+ISVMG EQAA VLA V+ D ER G+ +EEA K P L+K+E ESSAYYSS+RLWDDG+I+P DTRKVLGLS A + PT FGVFRM
Sbjct: 28 LDGKINTKSKDFVESIERMNTLTSELKTRLDVVRLGGGEAARSKHVARGKLLARDRIDSLVDPGSAFLELSPLA---AHDMYGTP--VPAAGIITGIGRIHGVECMILANDATVKGGTYFPMTVKKHLRAQEIARENRLPCIYMVDSGGAYLPLQAEIFPDKEHFGREFYNQANMSAAGIPQIAVVMGSCTAGGAYVPAMSDESVIVQGNGTVFLGGPPLVKAATGEVVTAEELGGADVHCRTSGVTDHLAKNDAHAIEIVRRIVSNLNWTSKANANVTQSLT----------EVEEPVFDPAELGGIIPVDGRKPFDVRKVIARIVDGSKFDEFKQHYGTTIVTGFARLYGRPIGIIANNGILFSESSVKAAHFIELCCQRQIPLLFLQNITGFMVGKKAEHGGIAKDGAKLVTAVSCANVPKVTCIIGGSYGAGNYGMCGRAFSPRFLYMWPNAKISVMGGEQAAGVLATVQRDNMERAGKTWSAEEEAAFKQPTLDKYEVESSAYYSSARLWDDGIIDPKDTRKVLGLSFSAALNELPTPTKFGVFRM 563
BLAST of mRNA_P-littoralis_Contig613.35.2 vs. uniprot
Match: K3X1F2_GLOUD (Methylcrotonoyl-CoA carboxylase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1F2_GLOUD) HSP 1 Score: 721 bits (1862), Expect = 2.670e-250 Identity = 366/569 (64.32%), Postives = 442/569 (77.68%), Query Frame = 2
Query: 335 AARGHVISSSPPSLRFPTLRGALDVPAETALKSKEAMAEMVDKLRSKLKMVEAGGGDVASKRHKGRGKLLARERIEALVDPATPFLELAPLAGYEASDRGGDDGGIMCGGVVAGIGRVEGLECMIVANDATVKGGTYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQAEVFPDKDHFGRIFFNQANMSAEGIPQIAVVMGVCTAGGAYVPAMSDESVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAEDDEHAISITRSIIANLNLGTITNPAAAVEADGDGPAAVAPQQWDEPLFDPREMGSIIPTDPKKPFDVRKVIARLLDGSRFHEFKERYGPTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGIPIIFLQNVTGFMVGKRYEHQGIAKDGAKLVTAVSCAKVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGAEQAANVLAQVETDKRERRGEKLREDEEAKIKDPILEKFERESSAYYSSSRLWDDGVIEPADTRKVLGLSLRVATKDAAPPTSFGVFRM 2041
A+ V+SS P ++ L G L+ +E +S M + +L++++ + GGG+ A RH RGKLL R+RI++L+D +PFLEL+PLA Y+ D G + G+V GIGR+ G+ECMI+ NDATVKGGTYFP+TVKKHLRAQE+A ENRLPC+Y+VDSGGAFLPKQA++FPD+DHFGR F+NQANMSA GIPQIAVVMG CTAGGAYVPAMSDESVIV G GTVFL GPPLV+AATGEV++ EELGGAD H R SGV DHFA +D HA+ ITR II+NLN P +VA +EPLF P E+G IIP D +KPFDVRKVIAR++DGS+F EFK+ YG T+VTGF LYG VGI+ANNG+LFSES++KAAHF+ELC QRGIP++FLQN+TGFMVGK+ EH GIAKDGAK+V AVSCAKVPKITC+IGGSYGAGNYGMCGR++SPRFL+MWPNARISVMG EQAA VLAQV+ D ER G+ +EEA K P L+K+E+ESSAY+S++RLWDDG+I+P DTRKVLGLSL A + A T FGVFRM
Sbjct: 2 ASHAGVLSSVPSNV----LDGKLNTKSEQFKESLVHMDALTAELKARVAKIRLGGGEKARDRHVSRGKLLVRDRIDSLLDRDSPFLELSPLAAYDMYD-----GQVPSAGIVTGIGRINGIECMILGNDATVKGGTYFPLTVKKHLRAQEIAMENRLPCVYLVDSGGAFLPKQADIFPDRDHFGREFYNQANMSAAGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGNGTVFLGGPPLVKAATGEVVTPEELGGADVHCRTSGVTDHFANNDHHALEITRRIISNLNY--TKQP------------SVAQAPIEEPLFSPEELGGIIPVDARKPFDVRKVIARIVDGSKFDEFKKYYGTTIVTGFAKLYGNPVGIIANNGILFSESSVKAAHFIELCSQRGIPLLFLQNITGFMVGKKAEHGGIAKDGAKMVMAVSCAKVPKITCIIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAAGVLAQVQRDNLERAGKTWTAEEEAAFKQPTLDKYEKESSAYFSTARLWDDGIIDPKDTRKVLGLSLSAALNEHAQETKFGVFRM 547
BLAST of mRNA_P-littoralis_Contig613.35.2 vs. uniprot
Match: A0A485LV68_9STRA (Methylcrotonoyl-CoA carboxylase n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LV68_9STRA) HSP 1 Score: 719 bits (1856), Expect = 1.260e-248 Identity = 357/561 (63.64%), Postives = 435/561 (77.54%), Query Frame = 2
Query: 359 SSPPSLRFPTLRGALDVPAETALKSKEAMAEMVDKLRSKLKMVEAGGGDVASKRHKGRGKLLARERIEALVDPATPFLELAPLAGYEASDRGGDDGGIMCGGVVAGIGRVEGLECMIVANDATVKGGTYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQAEVFPDKDHFGRIFFNQANMSAEGIPQIAVVMGVCTAGGAYVPAMSDESVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAEDDEHAISITRSIIANLNLGTITNPAAAVEADGDGPAAVAPQQWDEPLFDPREMGSIIPTDPKKPFDVRKVIARLLDGSRFHEFKERYGPTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGIPIIFLQNVTGFMVGKRYEHQGIAKDGAKLVTAVSCAKVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGAEQAANVLAQVETDKRERRGEKLREDEEAKIKDPILEKFERESSAYYSSSRLWDDGVIEPADTRKVLGLSLRVATKDAAPPTSFGVFRM 2041
S P ++ L G ++ ++ L S E M + +L+S+L +V GGG+ A +H RGK+L R+RI++L+DP +PFLEL+PLA Y+ + G+V GIGR+ G+ECMI+ NDATVKGGTYFP+TVKKHLRAQE+ARENRLPC+YMVDSGGAFLP QAE+FPDK+HFGR F+NQA MSA GIPQIAVVMG CTAGGAYVPAM DESVIV G GTVFLAGPPLV+AATGEV++AEELGGAD H R SGV DH A+DD HAI I R I++NLN PA + +EP FDP E+G +IP D +KPFDVRKVIAR++DGS+F EFK+ YG T+VTGF LYG+ +GI+ANNG+LFSES++KAAHF+ELCCQR IP++FLQN+TGFMVGK+ EH GIAKDGAKLVTAVSCA VPK+TC+IGGSYGAGNYGMCGR++SPRFL+MWPNA+ISVMG EQAA VLA V+ D ER G+ +++EA K P L+K+E ESS+YYS++RLWDDG+I+P DTRKVLGLS A + PT FGVFRM
Sbjct: 55 SLPYAVASNVLDGKINAKSKDFLDSMERMNGLTSELKSRLDVVRLGGGESARAKHVSRGKMLVRDRIDSLIDPGSPFLELSPLAAYDMYGTS-----VPAAGIVTGIGRINGVECMILGNDATVKGGTYFPMTVKKHLRAQEIARENRLPCVYMVDSGGAFLPLQAEIFPDKEHFGREFYNQATMSAAGIPQIAVVMGSCTAGGAYVPAMCDESVIVQGNGTVFLAGPPLVKAATGEVVTAEELGGADVHCRTSGVTDHLAKDDAHAIDIVRRIVSNLNWQK--TPAQTLTL------------VEEPRFDPAELGGLIPVDARKPFDVRKVIARIVDGSKFDEFKQHYGTTIVTGFARLYGRPIGIIANNGILFSESSVKAAHFIELCCQRQIPLLFLQNITGFMVGKKAEHGGIAKDGAKLVTAVSCASVPKVTCIIGGSYGAGNYGMCGRAFSPRFLYMWPNAKISVMGGEQAAGVLATVQRDNLERAGKTWSDEDEAAFKKPTLDKYEVESSSYYSTARLWDDGIIDPKDTRKVLGLSFSAALNETPSPTKFGVFRM 596
BLAST of mRNA_P-littoralis_Contig613.35.2 vs. uniprot
Match: H3G9Y1_PHYRM (Methylcrotonoyl-CoA carboxylase n=22 Tax=Peronosporaceae TaxID=4777 RepID=H3G9Y1_PHYRM) HSP 1 Score: 716 bits (1847), Expect = 8.800e-248 Identity = 356/551 (64.61%), Postives = 430/551 (78.04%), Query Frame = 2
Query: 389 LRGALDVPAETALKSKEAMAEMVDKLRSKLKMVEAGGGDVASKRHKGRGKLLARERIEALVDPATPFLELAPLAGYEASDRGGDDGGIMCGGVVAGIGRVEGLECMIVANDATVKGGTYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQAEVFPDKDHFGRIFFNQANMSAEGIPQIAVVMGVCTAGGAYVPAMSDESVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAEDDEHAISITRSIIANLNLGTITNPAAAVEADGDGPAAVAPQQWDEPLFDPREMGSIIPTDPKKPFDVRKVIARLLDGSRFHEFKERYGPTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGIPIIFLQNVTGFMVGKRYEHQGIAKDGAKLVTAVSCAKVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGAEQAANVLAQVETDKRERRGEKLREDEEAKIKDPILEKFERESSAYYSSSRLWDDGVIEPADTRKVLGLSLRVATKDAAPPTSFGVFRM 2041
L GAL+V + +S MA++ +LR ++ GGG+ A RH+ RGK+ R+RI++L+DP +PFLEL+PLA Y+ GG+ G+V G+GR+ G+ECMI+ NDATVKGGTYFP+TVKKHLRAQE+A+ENRLPC+Y+VDSGGAFLP QA++FPD++HFGR F+NQA MSA GIPQIAVVMG CTAGGAYVPAMSDESVIV G GTVFL GPPLV+AATGEV++ EELGGAD H R SGV DH+A +D HA+ ITR I++NLN AV +EPL+ P E+G +IP D +KPFDVRKVIAR++DGSRF EFK+ YG T+VTGF LYG VGIVANNG+LFSES++KAAHF+ELC QRGIP++FLQN+TGFMVGK+ EH GIAKDGAK+V AVS AKVPK+TC+IGGSYGAGNYGMCGR++SPRFL+MWPNARISVMG EQAA VLAQV+ D ERR E +EEA K PIL+K+E ESSAYYS++RLWDDG+I+P DTRKVLGLSL A + T FGVFRM
Sbjct: 32 LDGALNVKSAQFQESLAHMAKLTSELRERVAHARQGGGEAARARHESRGKMPVRDRIDSLLDPGSPFLELSPLAAYDMYG-----GGVPSAGIVTGVGRINGVECMILGNDATVKGGTYFPLTVKKHLRAQEIAQENRLPCVYLVDSGGAFLPLQADIFPDREHFGREFYNQATMSAMGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGNGTVFLGGPPLVKAATGEVVTPEELGGADVHCRTSGVTDHYANNDAHALDITRRIVSNLNYRK--------------QPAVTQTPIEEPLYSPDELGGVIPVDSRKPFDVRKVIARIVDGSRFDEFKKEYGSTIVTGFARLYGNPVGIVANNGILFSESSVKAAHFIELCSQRGIPLLFLQNITGFMVGKKAEHGGIAKDGAKMVMAVSNAKVPKLTCIIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAAGVLAQVQRDNYERRKESWSAEEEAAFKQPILDKYEHESSAYYSTARLWDDGIIDPKDTRKVLGLSLSAALNEEPKETKFGVFRM 563
BLAST of mRNA_P-littoralis_Contig613.35.2 vs. uniprot
Match: A0A5D6Y6J6_9STRA (Methylcrotonoyl-CoA carboxylase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6J6_9STRA) HSP 1 Score: 714 bits (1844), Expect = 3.450e-247 Identity = 365/575 (63.48%), Postives = 440/575 (76.52%), Query Frame = 2
Query: 317 ARRAAAAARGHVISSSPPSLRFPTLRGALDVPAETALKSKEAMAEMVDKLRSKLKMVEAGGGDVASKRHKGRGKLLARERIEALVDPATPFLELAPLAGYEASDRGGDDGGIMCGGVVAGIGRVEGLECMIVANDATVKGGTYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQAEVFPDKDHFGRIFFNQANMSAEGIPQIAVVMGVCTAGGAYVPAMSDESVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAEDDEHAISITRSIIANLNLGTITNPAAAVEADGDGPAAVAPQQWDEPLFDPREMGSIIPTDPKKPFDVRKVIARLLDGSRFHEFKERYGPTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGIPIIFLQNVTGFMVGKRYEHQGIAKDGAKLVTAVSCAKVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGAEQAANVLAQVETDKRERRGEKLREDEEAKIKDPILEKFERESSAYYSSSRLWDDGVIEPADTRKVLGLSLRVATKDAAPPTSFGVFRM 2041
A+R A A+ V++ + F L G L+ + +S M + +LR+++ V GGG+ A RH RGK+L R+RI++L+D +PFLEL+PLA Y+ D DD + G+V GIGR+ G+ECMI+ NDATVKGGTYFP+TVKKHLRAQE+A+ENRLPC+Y+VDSGGAFLPKQAE+FPD+DHFGR F+NQA MSA GIPQIAVVMG CTAGGAYVPAMSDESVIV GTGTVFL GPPLVRAATGEV++ E LGGAD H R SGV DH A D HA++ITR I+ANLN+ + P AVA +EP F P E+G ++P D +KPFDVR VIAR++DGSRF EFK+ YGPT+VTGF LYG VGIVANNG+LFSESA+KAAHF+ELC QRGIP++FLQN+TGFMVG + EH GIAKDGAK+V AV+CAKVPK+TC+IGGSYGAGNYGMCGR++SPRFL+MWPNARI+VMG EQAA VLAQV+ D R G + EEA K P L+ FERESSAY+S++RLWDDGVI+P DTR+VLGLSL A + A T FGVFRM
Sbjct: 21 AQRVAMASHAGVLNEAD----FNVLDGKLNTRSPEFRESLAHMDALTAELRARVAKVRLGGGEKARARHVARGKMLVRDRIDSLLDRDSPFLELSPLAAYDVYD---DD--VPSAGIVTGIGRIHGVECMILGNDATVKGGTYFPLTVKKHLRAQEIAQENRLPCVYLVDSGGAFLPKQAEIFPDRDHFGREFYNQATMSAAGIPQIAVVMGSCTAGGAYVPAMSDESVIVRGTGTVFLGGPPLVRAATGEVVTPEALGGADVHCRTSGVTDHLAHSDAHALAITRRIVANLNV--VKQP------------AVAQAVIEEPRFSPDELGGVVPVDARKPFDVRHVIARIVDGSRFDEFKQHYGPTIVTGFARLYGNPVGIVANNGILFSESAVKAAHFIELCAQRGIPLLFLQNITGFMVGSKAEHGGIAKDGAKMVMAVACAKVPKLTCIIGGSYGAGNYGMCGRAFSPRFLYMWPNARIAVMGGEQAAGVLAQVQRDNHARAGREWTAAEEAAFKQPTLDTFERESSAYFSTARLWDDGVIDPRDTRRVLGLSLSAAMNEHAQETKFGVFRM 572
BLAST of mRNA_P-littoralis_Contig613.35.2 vs. uniprot
Match: A0A662XVW0_9STRA (Methylcrotonoyl-CoA carboxylase n=11 Tax=Peronosporaceae TaxID=4777 RepID=A0A662XVW0_9STRA) HSP 1 Score: 713 bits (1841), Expect = 8.190e-247 Identity = 357/551 (64.79%), Postives = 429/551 (77.86%), Query Frame = 2
Query: 389 LRGALDVPAETALKSKEAMAEMVDKLRSKLKMVEAGGGDVASKRHKGRGKLLARERIEALVDPATPFLELAPLAGYEASDRGGDDGGIMCGGVVAGIGRVEGLECMIVANDATVKGGTYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQAEVFPDKDHFGRIFFNQANMSAEGIPQIAVVMGVCTAGGAYVPAMSDESVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAEDDEHAISITRSIIANLNLGTITNPAAAVEADGDGPAAVAPQQWDEPLFDPREMGSIIPTDPKKPFDVRKVIARLLDGSRFHEFKERYGPTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGIPIIFLQNVTGFMVGKRYEHQGIAKDGAKLVTAVSCAKVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGAEQAANVLAQVETDKRERRGEKLREDEEAKIKDPILEKFERESSAYYSSSRLWDDGVIEPADTRKVLGLSLRVATKDAAPPTSFGVFRM 2041
L GAL+V ++ +S+ M + +LR ++ GGG+ A RH RGK+ R+RI+ L+D +PFLEL+PLA G GG+ G+V GIGR+ G+ECMI+ANDATVKGGTYFP+TVKKHLRAQE+A+ENRLPC+Y+VDSGGAFLP QA++FPD+DHFGR F+NQANMSA GIPQIAVVMG CTAGGAYVPAMSDESVIV G GTVFL GPPLV+AATGEV++ EELGGAD H R SGV DHFA +D HA+ ITR I++NLN +V +EPLF P E+G +IP D +KPFDVRKVIAR++DGSRF EFK+ YGPT+VTGF LYG VGI+ANNG+LFSES++KAAHF+ELC QRG+P++FLQN+TGFMVGK+ EH GIAKDGAK+V AV+ AKVPKITC+IGGSYGAGNYGMCGR++SPRFL+MWPNARISVMG EQAA VLAQV+ D +RR E +EEA K PIL+K+E ESSAYYS++RLWDDG+I+P DTRKVLGLSL A + T FGVFRM
Sbjct: 36 LDGALNVKSKEFRESQARMEALTAELRERVAAARQGGGESARARHVMRGKMPVRDRIDTLLDAGSPFLELSPLAA-----DGVYKGGVPAAGIVTGIGRISGVECMILANDATVKGGTYFPLTVKKHLRAQEIAQENRLPCVYLVDSGGAFLPLQADIFPDRDHFGREFYNQANMSAMGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGNGTVFLGGPPLVKAATGEVVTGEELGGADVHCRTSGVTDHFANNDAHALDITRRIVSNLNYRK--------------QPSVTQTPIEEPLFSPDELGGVIPVDSRKPFDVRKVIARIVDGSRFDEFKQLYGPTVVTGFARLYGNPVGIIANNGILFSESSVKAAHFIELCSQRGVPLLFLQNITGFMVGKKAEHGGIAKDGAKMVMAVANAKVPKITCIIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAAGVLAQVQRDNYDRRNESWSAEEEAAFKQPILDKYEHESSAYYSTARLWDDGIIDPKDTRKVLGLSLSAALNEEPKETKFGVFRM 567
BLAST of mRNA_P-littoralis_Contig613.35.2 vs. uniprot
Match: A0A4D9CUE1_9STRA (Methylcrotonoyl-CoA carboxylase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUE1_9STRA) HSP 1 Score: 711 bits (1834), Expect = 1.530e-246 Identity = 360/533 (67.54%), Postives = 426/533 (79.92%), Query Frame = 2
Query: 443 MAEMVDKLRSKLKMVEAGGGDVASKRHKGRGKLLARERIEALVDPATPFLELAPLAGYEASDRGGDDGGIMCGGVVAGIGRVEGLECMIVANDATVKGGTYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQAEVFPDKDHFGRIFFNQANMSAEGIPQIAVVMGVCTAGGAYVPAMSDESVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAEDDEHAISITRSIIANLNLGTITNPAAAVEADGDGPAAVAPQQWDEPLFDPREMGSIIPTDPKKPFDVRKVIARLLDGSRFHEFKERYGPTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGIPIIFLQNVTGFMVGKRYEHQGIAKDGAKLVTAVSCAKVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGAEQAANVLAQVETDKRERRGEKLREDEEAKIKDPILEKFERESSAYYSSSRLWDDGVIEPADTRKVLGLSLRVATKDAAPPTSFGVFRM 2041
M ++VD+L L+ V GGG++A +H+ RGKL RERIE LVDP TPFLEL+PLAG E G D + GG+V GIGRV G+ECM+VANDATVKGGTY+PITVKKHLRAQE+A +N+LPCIY+VDSGGAFLP+Q EVFPD+DHFGRIFFNQANMSA GIPQIAVVMG CTAGGAYVPAMSDES+IV G+GT+FL GPPLV+AATGEV+SAE+LGGAD H R SGV DH+A DD HA+ ITRSI+A+LN+ A + GP ++EPL+ P E+G ++P DPK+PFDVR VIAR++DGSRF EFK YGPT+VTGF ++G GIVANNG+LFSESALKAAHF+ELC QR IP++FLQN+TGFMVG++YE++GIAK+GAKLVTAVS +KVPKIT +I GSYGAGNYGMCGR++SPRFLFMWPNA+ISVMG EQAANVLA V +G+ EE+ K PIL KF +ESS YYSS+RLWDDGVI P DTR+VLGL L VA K+ A T FGVFRM
Sbjct: 1 MDKLVDRLDGILEEVYQGGGELARSKHEQRGKLYVRERIERLVDPGTPFLELSPLAGRELY---GQDK-VPAGGIVTGIGRVAGVECMLVANDATVKGGTYYPITVKKHLRAQEIASQNKLPCIYLVDSGGAFLPRQDEVFPDRDHFGRIFFNQANMSAAGIPQIAVVMGSCTAGGAYVPAMSDESIIVKGSGTIFLGGPPLVKAATGEVVSAEDLGGADVHCRTSGVVDHYATDDLHALDITRSIVASLNVPEARTAAFSPNGKTGGP-------YEEPLYSPDELGGLVPLDPKRPFDVRSVIARVVDGSRFQEFKALYGPTIVTGFARIHGILTGIVANNGILFSESALKAAHFIELCSQRHIPLVFLQNITGFMVGRKYENEGIAKNGAKLVTAVSTSKVPKITLLIAGSYGAGNYGMCGRAFSPRFLFMWPNAKISVMGGEQAANVLATVAA-----QGKDWTSAEESAFKAPILAKFSKESSCYYSSARLWDDGVIRPRDTRRVLGLGLAVAVKEQAERTQFGVFRM 517 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig613.35.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig613.35.2 >prot_P-littoralis_Contig613.35.2 ID=prot_P-littoralis_Contig613.35.2|Name=mRNA_P-littoralis_Contig613.35.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=581bp MSRVAARRAAAAARGHVISSSPPSLRFPTLRGALDVPAETALKSKEAMAEback to top mRNA from alignment at P-littoralis_Contig613:120015..126808+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig613.35.2 ID=mRNA_P-littoralis_Contig613.35.2|Name=mRNA_P-littoralis_Contig613.35.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=6794bp|location=Sequence derived from alignment at P-littoralis_Contig613:120015..126808+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig613:120015..126808+ >mRNA_P-littoralis_Contig613.35.2 ID=mRNA_P-littoralis_Contig613.35.2|Name=mRNA_P-littoralis_Contig613.35.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1743bp|location=Sequence derived from alignment at P-littoralis_Contig613:120015..126808+ (Pylaiella littoralis U1_48)back to top |