mRNA_P-littoralis_Contig613.13.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig613.13.1
Unique NamemRNA_P-littoralis_Contig613.13.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig613.13.1 vs. uniprot
Match: D7G8N1_ECTSI (Eukaryotic translation initiation factor 3 subunit E n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8N1_ECTSI)

HSP 1 Score: 896 bits (2315), Expect = 0.000e+0
Identity = 445/483 (92.13%), Postives = 460/483 (95.24%), Query Frame = 2
Query:  191 MSEAVEAXXXXXXTSKYDLTRTISKYLDLHMMFPLLDFVEVSKMYPADQVAQARLDLLDATNMSDYAMEIYRSLNNTAEDPPDMVERRAEVFARMSALKGEAGVLTEIFMDKAAVEKASMTQVDHSSFTPQQLAVEKLIKEQNFTWKGIKAELKLEDSALESYYANAKFQSDCGDYVTAAAALKSYCEITQTPGVPGSGPNGMGALWGRLACEILVANWDGALTLLRELKGCIEFTNAPPLEQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAIILTKAGAGGGKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQARLEECERVLLSDFFLCNCAGEFMEAARHFIFETYCRIHHKIDIGMLADKMGMEIEAAEKWIVDLIRGSKLDAKIDSRDNNVIMGGTFPSVYQQIMGKTKDLTVRSYTLVNMLKQLATDTANGVTPDPANYSGRGGGD 1639
            MSEAVEA      TS+YDLTRTISKYLDLHMMFPLLDFVE+S +YPADQVAQARLDLLD TNMSDYAMEIY+SLN+T EDPPDMVERRAEVFARMS LK EAG+LTE+F DKA VE+A++TQVD +SFT QQL+VEKLIKEQNFTWKGIK EL LEDSALESYYANAKFQSDCGDYV AAAALKSYC+ITQTPGVPGSGPNGM ALWGRLACEILVANWDGALTLLRELK CIEFTNAPPL+QLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAIILTKAGAGGGKYVMRDLMRVLE EKHAYTDPVTEFLEGLQVSFDFDGAQARL ECERVLLSDFFLCNCA EFMEAARHFIFETYCRIHHKIDIGMLADKMGME+EAAEKWIVDLIRGSKLDAKIDSRDNNVIMGGTFPSVYQQIMGKTKDLTVRSYTLVNMLKQLATDTANGVTPDPANYSGRGGGD
Sbjct:    1 MSEAVEAVPASRTTSQYDLTRTISKYLDLHMMFPLLDFVEMSNIYPADQVAQARLDLLDGTNMSDYAMEIYKSLNSTDEDPPDMVERRAEVFARMSTLKDEAGILTEVFADKAVVEEAAVTQVDPASFTQQQLSVEKLIKEQNFTWKGIKGELGLEDSALESYYANAKFQSDCGDYVAAAAALKSYCDITQTPGVPGSGPNGMSALWGRLACEILVANWDGALTLLRELKSCIEFTNAPPLQQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAIILTKAGAGGGKYVMRDLMRVLEHEKHAYTDPVTEFLEGLQVSFDFDGAQARLVECERVLLSDFFLCNCADEFMEAARHFIFETYCRIHHKIDIGMLADKMGMEMEAAEKWIVDLIRGSKLDAKIDSRDNNVIMGGTFPSVYQQIMGKTKDLTVRSYTLVNMLKQLATDTANGVTPDPANYSGRGGGD 483          
BLAST of mRNA_P-littoralis_Contig613.13.1 vs. uniprot
Match: A0A836CBR3_9STRA (Eukaryotic translation initiation factor 3 subunit E n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBR3_9STRA)

HSP 1 Score: 524 bits (1350), Expect = 3.610e-175
Identity = 279/483 (57.76%), Postives = 339/483 (70.19%), Query Frame = 2
Query:  200 AVEAXXXXXXTSKYDLTRTISKYLDLHMMFPLLDFVEVSKMYPADQVAQARLDLLDATNMSDYAMEIYRSLNNTAEDPPDMVERRAEVFARMSALKGEAGVLTEIFMDKAAVEKASMTQVDHSSFTPQQLAVEKLIKEQNFTWKGIKAELKLEDSALESYYANAKFQSDCGDYVTAAAALKSYCEITQTPGVPGSGPNGMGALWGRLACEILVANWDGALTLLRELKGCIEFTNAPPLEQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAIILTKAGAGGGK----YVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQARLEECERVLLSDFFLCNCAGEFMEAARHFIFETYCRIHHKIDIGMLADKMGMEIEAAEKWIVDLIRGSKLDAKIDSRDNNVIMGGTFPSVYQQIMGKTKDLTVRSYTLVNMLKQLATDTANGVTPDPANYSGRGGG 1636
            A  A       + +DLTRTIS+YLDLH+MFPLLDFVE++ MY +  V+QARLDLL+ TNM DYAME+Y++L+N A  P +MV RR +VFAR+  LK  A  L  I  D  AV +                    L  EQ F W G+++E  L DS L+SY   AKF  DCGDY  A AALK +  ++   G  GS   G  ALWGRLACEIL  N +GAL L+R++K  IE+     +EQLQQRSWLLHWSLFVFFNHANGRDEL+ LFFEE F+QAIQTNCPWLLRYLVTA++LT++            MRDL+RVLEQE+ +Y+DP+T+FLE L V+FDFDGA  R  ECE+VL  DFFLC+   EFMEAAR F FETYCRIH KID+ +LA KM M+ +AAEKWI DLIR S+LDAKIDSRDN+V+MG +FPSVYQQ++ KT DL++RSY L+N LKQ A D ANG+T DP NY  + GG
Sbjct:    6 AASAGGDGSTGADHDLTRTISEYLDLHLMFPLLDFVEMNNMYDSAGVSQARLDLLEPTNMVDYAMEVYQNLHNGAAAPKEMVVRRDKVFARLEELKEAASRLIAIVEDPVAVGR--------------------LENEQRFDWNGLQSEFGLPDSMLQSYADLAKFNYDCGDYKGAGAALKVFLALSG--GAAGS-QRGPSALWGRLACEILSNNSEGALALIRDVKAMIEYRGGSAIEQLQQRSWLLHWSLFVFFNHANGRDELIALFFEEKFLQAIQTNCPWLLRYLVTAVVLTRSTGSTSSNKQAQTMRDLIRVLEQEQGSYSDPITQFLESLYVNFDFDGALLRRRECEQVLRRDFFLCSVCDEFMEAARLFTFETYCRIHRKIDVALLAAKMDMDADAAEKWIADLIRTSQLDAKIDSRDNSVVMGASFPSVYQQVIEKTDDLSLRSYVLINNLKQYAQDHANGLTDDP-NYGQQRGG 464          
BLAST of mRNA_P-littoralis_Contig613.13.1 vs. uniprot
Match: A0A7S2SQG8_9STRA (Eukaryotic translation initiation factor 3 subunit E n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQG8_9STRA)

HSP 1 Score: 403 bits (1036), Expect = 7.820e-129
Identity = 216/450 (48.00%), Postives = 293/450 (65.11%), Query Frame = 2
Query:  230 TSKYDLTRTISKYLDLHMMFPLLDFVEVSKM--YPADQVAQARLDLLDATNMSDYAMEIYRSLN-NTAEDPPDMVERRAEVFARMSALKGEAGVLTEIFMDKAAVEKASMTQVDHSSFTPQQLAVEKLIKEQNFTWKGIKAELKLEDSALESYYANAKFQSDCGDYVTAAAALKSYCEITQTPGVPGSGPNGMGALWGRLACEILVANWDGALTLLRELKGCIEFTNAPPLEQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAIILTKAGAGGGKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQARLEECERVLLSDFFLCNCAGEFMEAARHFIFETYCRIHHKIDIGMLADKMGMEIEAAEKWIVDLIRGSKLDAKIDSRDNNVIMGGTFPSVYQQIMGKTKDLTVRSYTLVNMLKQ 1570
            +++YDLT  IS+YLDLH+MFPLL+FVE ++   Y    + +ARL  L  TNM DYA+EI+  LN    EDP DMV +R EV+ ++  +K E   L+  F +    + A         F           + Q+ + + I+  + ++ + +E+YY   KFQ +CG Y  A   L  +  I +      S   G  ALWG+ A  IL   WD AL  ++ LK  I+    P   QLQQR+WLLHWSLFVFFNH  GRD ++  F  + ++QAIQ N PWLLRYL +A+I+ +   G     ++ L+RV+EQE+H+Y+DP+T+FLE L+V FDF+GAQ +L EC  VLL D+FLCNC  EF+++AR FIFETYCRIH KIDI MLA+K+ ME E AE+WIV+LIRG++LDAKIDS+DN VIMG +FPSVYQQI+ KTKDLTVRS+ L   +++
Sbjct:   13 SARYDLTPVISEYLDLHLMFPLLEFVESNEHLNYDKSDIQRARLAYLKPTNMVDYAIEIFHDLNPEVKEDPADMVRQRDEVYEKLGRIKTEHTKLSTFFQEMREGKYAG-------GFG----------EGQSLSLRWIQENIGVDQAGVENYYRYGKFQYECGLYEDACTVLSDFLSIDEYKIT--SSDLGFAALWGKFAALILQKQWDAALAEMQTLKKAIDERTTPDKLQLQQRTWLLHWSLFVFFNHHQGRDLIIEAFLSDRYLQAIQINAPWLLRYLTSAVIINQRRRGE----LKALVRVIEQEQHSYSDPITKFLECLRVDFDFEGAQQKLVECTNVLLGDYFLCNCTDEFVQSARLFIFETYCRIHRKIDISMLAEKLVMEPEDAEQWIVNLIRGAQLDAKIDSKDNCVIMGSSFPSVYQQIVDKTKDLTVRSFQLATNVER 439          
BLAST of mRNA_P-littoralis_Contig613.13.1 vs. uniprot
Match: A0A7S2GAP6_9STRA (Eukaryotic translation initiation factor 3 subunit E n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GAP6_9STRA)

HSP 1 Score: 397 bits (1021), Expect = 4.260e-126
Identity = 220/474 (46.41%), Postives = 301/474 (63.50%), Query Frame = 2
Query:  236 KYDLTRTISKYLDLHMMFPLLDFVEVSKM--YPADQVAQARLDLLDATNMSDYAME------IYRSLNNTAEDPPDM----VERRAEVFARMSALKGEAGVLTEIFMDKAAVEKASMTQVDHSSFTPQQLAVEKLIKEQNFTWKGIKAELKLEDSALESYYANAKFQSDCGDYVTAAAALKSYCEITQTPGVPGSGPNGMGALWGRLACEILVANWDGALTLLRELKGCIEFTNAPPLEQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAIILTKAGAGGGKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQARLEECERVLLSDFFLCNCAGEFMEAARHFIFETYCRIHHKIDIGMLADKMGMEIEAAEKWIVDLIRGSKLDAKIDSRDNNVIMGGTFPSVYQQIMGKTKDLTVRSYTLVNMLKQLATDTANGVTPDPANYS 1621
            ++DLT TIS YLDLH++FPLLDFVE ++   Y    + +ARL LL  TNM+DY +E       + +  +  E+ P +     + + E+ ++M            ++ + A +EK +    D   F   + AV  L++      + ++  L ++  AL++YY  AKFQ DCG+Y  A   L  Y  + +T     +   G  A WG+ A  IL+ NWD AL  +  LK  IE  N    E+LQQR+WLLHWSLF+FFNH  G+D L+  FF E ++QAIQTN PWLLRYL TA+I+        +  +++L++V++QE++ Y DP+T+FLE L V FDF+GAQ +L EC+ VL SD+FLCNCA  FME AR FIFETYCRIHHKIDIGMLA K+ M  E AE+WIVDLIRG+ LDAKIDS++N VIMG  FPSVYQQ++ KTKDLT+RSY L   +++ + DT    TP+P + S
Sbjct:   34 RFDLTPTISAYLDLHLLFPLLDFVENNEQLKYDGADITRARLALLKPTNMADYTIEQAVRVWCFENGADPNENDPSIKLLPADEQTELQSQMDT----------VYANIAELEKNNKKLYD---FFQDKDAVRSLVESGQLNLEYLEKNLSVDKEALDAYYHYAKFQYDCGNYSCAYEKLSDYLSVAETK----TTELGYNAQWGKFAAAILMTNWDQALIEMNILKKAIEERNVSDKEKLQQRTWLLHWSLFLFFNHPKGKDMLIDTFFSERYLQAIQTNTPWLLRYLTTAVIINNRR----RNELKNLLQVIQQEQYTYNDPITKFLECLYVHFDFEGAQQKLHECKLVLQSDYFLCNCADVFMENARLFIFETYCRIHHKIDIGMLAQKLAMGPEEAERWIVDLIRGAYLDAKIDSKENYVIMGSNFPSVYQQVIDKTKDLTIRSYQLAENIER-SMDTP---TPEPRHTS 482          
BLAST of mRNA_P-littoralis_Contig613.13.1 vs. uniprot
Match: F0XWU6_AURAN (Eukaryotic translation initiation factor 3 subunit E n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWU6_AURAN)

HSP 1 Score: 382 bits (982), Expect = 6.600e-121
Identity = 211/446 (47.31%), Postives = 282/446 (63.23%), Query Frame = 2
Query:  233 SKYDLTRTISKYLDLHMMFPLLDFVEVSKMYPADQVAQARLDLLDATNMSDYAMEIYRSLNNTAEDPPDMVERRAEVFARMSALKGEAGV-LTEIFMDKAAVEKASMTQVDHSSFTPQQLAVEKLIKEQNFTWKGIKAELKLEDSALESYYANAKFQSDCGDYVTAAAALKSYCEITQTPGVPGSGPNGMGALWGRLACEILVANWDGALTLLRELKGCIEFTNAPPLEQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAIILTKAGAGGGKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQARLEECERVLLSDFFLCNCAGEFMEAARHFIFETYCRIHHKIDIGMLADKMGMEIEAAEKWIVDLIRGSKLDAKIDSRDNNVIMGGTFPSVYQQIMGKTKDLTVRSYTLVNMLK 1567
            S+Y++T+ IS +LD H++FPLLDF+E +  Y A  V +ARLDLL  TNM DYA+EI  +L +                A  + ++G   V   E   D A V++ +    D         AVE++ ++  +T   ++A+  +  +    Y+  AKF  +CGDY  A   L  Y  +    G      +G  ALWG+   E+L+ NW+GAL  L  L+  I+   APPLEQLQQRSWLLHWSLFVFFNHA G D ++ LF  E ++QAIQTNCPWLLRYL TA+I+ K      +  ++DL+RV+  E     DPVT+FLE L V FDF+GAQ  L EC++ L SD+FLCNCA  FME AR F+FETYCRIH KIDIGML+DK+ ME E AE+W+VDLIRG+ LDAKIDS+D+ V+MG    SVY Q++ KT+DL+ RS  L++ L+
Sbjct:   17 SEYEVTQKISPFLDAHLVFPLLDFLEENTSYEAGSVQRARLDLLAPTNMVDYAIEIRSALGD----------------ANAALVEGAPSVEAMEARRDAAKVQRVAEVLEDAE-------AVEQMKRDGTYTAADLEAKHGIGPANWADYFEFAKFLYECGDYEGARDMLDHYLALCFPAGKK-LDASGFRALWGKFGSEVLLKNWEGALHDLGRLRAAIDDFGAPPLEQLQQRSWLLHWSLFVFFNHAKGHDGIIDLFLNEKYLQAIQTNCPWLLRYLTTAVIINKRR----RSTLKDLVRVITMEHDLKADPVTQFLECLYVKFDFEGAQRTLAECDKALRSDYFLCNCADAFMEDARLFVFETYCRIHTKIDIGMLSDKLVMEREKAERWVVDLIRGALLDAKIDSQDSCVVMGTDTTSVYSQVIDKTRDLSNRSAALLSALE 434          
BLAST of mRNA_P-littoralis_Contig613.13.1 vs. uniprot
Match: A0A5J4XZT5_9CHLO (Eukaryotic translation initiation factor 3 subunit E n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XZT5_9CHLO)

HSP 1 Score: 379 bits (974), Expect = 5.250e-120
Identity = 200/444 (45.05%), Postives = 291/444 (65.54%), Query Frame = 2
Query:  233 SKYDLTRTISKYLDLHMMFPLLDFVEVSKMYPADQVAQARLDLLDATNMSDYAMEIYRSLNNTAEDPP-DMVERRAEVFARMSALKGEAGVLTEIFMDKAAVEKASMTQVDHSSFTPQQLAVEKLIKEQNFTWKGIKAELKLEDSALESYYANAKFQSDCGDYVTAAAALKSYCEITQTPGVPGSGPNGMGALWGRLACEILVANWDGALTLLRELKGCIEFTN-APPLEQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAIILTKAGAGGGKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQARLEECERVLLSDFFLCNCAGEFMEAARHFIFETYCRIHHKIDIGMLADKMGMEIEAAEKWIVDLIRGSKLDAKIDSRDNNVIMGGTFPSVYQQIMGKTKDLTVRSYTLVN 1558
            +++DLT  ++K +D H++FPLL+++   ++YP DQ+ Q +LDLL+ TNM DYAMEI+  LNN   DPP ++ ERR EV   +  L+ +A  + +   D++ V++                      K QN  W  ++ E  +    +++ Y  AKFQ DCG+Y  AA  L  Y  ++       +    + ALWG+LA EIL+ +WD A+  L +LK  I+  N AP L QLQQR+WL+HWSLFVFFNH NGR+ ++ LFF+E F+ AIQTN   L+RYL  A ++ K      + VM+DLMR++EQE +  +DPVT+FL+ L  ++DFDGAQ +L+ECE+V+ +D+FL +C  EF+E AR FIFETYCRIH+ I++ MLA K+GM+ ++AEKWIV+LIR ++L+AKIDS+   V+M  TFPS  +QI  K KDL++R++ L N
Sbjct:    2 AEHDLTAKLAKSMDRHLVFPLLEWLSAKELYPEDQIQQGKLDLLNKTNMLDYAMEIFTQLNN--RDPPQELKERRTEVVQNLRKLQAQADSIVQFLSDESLVKQLKQE------------------KAQNLPW--LQREHNIGSEQIDALYQYAKFQFDCGNYSEAAEFLYHYRTLST------NSERNLSALWGKLAAEILLQDWDTAMDSLTKLKSVIDDNNFAPLLVQLQQRTWLMHWSLFVFFNHENGRNAIIDLFFQERFLNAIQTNAQHLVRYLAVAAVVNKRR----RNVMKDLMRLIEQESYQVSDPVTDFLQCLYTNYDFDGAQQKLQECEQVIDNDYFLTSCKEEFVENARMFIFETYCRIHNCIELKMLAAKLGMDEQSAEKWIVNLIRNARLNAKIDSQAGTVVMNMTFPSPTEQITEKAKDLSMRTFMLAN 413          
BLAST of mRNA_P-littoralis_Contig613.13.1 vs. uniprot
Match: UPI001F04876B (eukaryotic translation initiation factor 3 subunit E-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F04876B)

HSP 1 Score: 380 bits (975), Expect = 9.010e-120
Identity = 206/441 (46.71%), Postives = 288/441 (65.31%), Query Frame = 2
Query:  233 SKYDLTRTISKYLDLHMMFPLLDFVEVSKMYPADQVAQARLDLLDATNMSDYAMEIYRSLNNTAEDPPDMVERRAEVFARMSALKGEAGVLTEIFMDKAAVEKASMTQVDHSSFTPQQLAVEKLIKEQNFTWKGIKAELKLEDSALESYYANAKFQSDCGDYVTAAAALKSYCEITQTPGVPGSGPNGMGALWGRLACEILVANWDGALTLLRELKGCIEFTNAPPLEQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEP-FMQAIQTNCPWLLRYLVTAIILTKAGAGGGKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQARLEECERVLLSDFFLCNCAGEFMEAARHFIFETYCRIHHKIDIGMLADKMGMEIEAAEKWIVDLIRGSKLDAKIDSRDNNVIMGGTFPSVYQQIMGKTKDLTVRSYTL 1552
            ++ DLT  I  YLD H++FPL++F+ V ++Y  ++V Q  L+LL+ T M D AM++++ +N   E P +++E+RA+V   +  L+ ++  +T++F D+  VEKA  ++     F       E + KE     KG++ E      A+E+ Y  +KFQ +CG+Y +AA  L  Y  +        + P  + ALWG+LA EIL+ NWD AL  L  LK  ++  + P L+QLQ R+WLLHWSLFV+FNHA GRD L+ LF  +P ++ AIQT CP +LRYL TA+I TK      + V++DL++V+EQE +AY DP+TEFL+ L V F+FDGAQ +L ECE VL +DFFLC C  EF E AR FIFET+CRIH  I IGMLA+K+ M  E AE+WIV+LIR ++LDAKIDS   +V+MG   PSVYQQ+M KTK L  +   L
Sbjct:    2 AEQDLTSKIGCYLDRHLVFPLMEFLSVKQVYDENEVLQCILELLNNTKMVDLAMDVFKRINPDEEIPEELIEKRAQVVKELKQLEEKSEPVTKLFQDEEFVEKAQTSRDGKHLF-------EFIQKE-----KGVEYE------AVENLYHYSKFQYECGNYSSAADNLYFYRILAHH-----TEPKTVDALWGKLASEILMQNWDAALVDLDSLKEVVDQNHYPELQQLQLRTWLLHWSLFVYFNHAKGRDLLIDLFLYQPKYLNAIQTMCPHILRYLTTAVITTKRR----RVVLKDLVKVIEQESYAYKDPITEFLQCLYVDFNFDGAQKKLRECETVLKNDFFLCGCIDEFRENARLFIFETFCRIHQCISIGMLAEKLDMSPEEAERWIVNLIRNARLDAKIDSEKGHVVMGTQSPSVYQQVMEKTKGLLFKCQVL 415          
BLAST of mRNA_P-littoralis_Contig613.13.1 vs. uniprot
Match: A0A388K4K2_CHABU (Eukaryotic translation initiation factor 3 subunit E n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K4K2_CHABU)

HSP 1 Score: 382 bits (982), Expect = 3.870e-119
Identity = 198/449 (44.10%), Postives = 288/449 (64.14%), Query Frame = 2
Query:  233 SKYDLTRTISKYLDLHMMFPLLDFVEVSKMYPADQVAQARLDLLDATNMSDYAMEIYRSLNNTAEDPPDMVERRAEVFARMSALKGEAGVLTEIFMDKAAVEKASMTQVDHSSFTPQQLAVEKLIKEQNFTWKGIKAELKLEDSALESYYANAKFQSDCGDYVTAAAALKSYCEITQTPGVPGSGPNGMGALWGRLACEILVANWDGALTLLRELKGCIEFTN-APPLEQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAIILTKAGAGGGKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQARLEECERVLLSDFFLCNCAGEFMEAARHFIFETYCRIHHKIDIGMLADKMGMEIEAAEKWIVDLIRGSKLDAKIDSRDNNVIMGGTFPSVYQQIMGKTKDLTVRSYTLVNMLKQLA 1576
            SKYDLT  ++ +LD H++FPLL+F++  K++P D + +A++DLL  TNM DYAM+I++ L NT + P +MVERR EV   + AL+  A  L     + + V++                    L  E+ +  + ++   ++    +E  Y  AKFQ DCG+Y  AA  L  Y  +        +   G+ ALWG+ A EIL+ NWD A+  +  LK  I+  + + PL QLQQR+WL+HWSLFVFFNH NGR+ ++ LFF+E +M AIQTN   LLRYL TA+I+ K      + +++DL++V++QE + Y DP+TEFLE L V++DF+GAQ +L ECE V+ +D+F+   + EF+E AR FIFETYCRIH  IDI ML+ ++ M  + AE+WI++LIR +KLDAKID++   V+MG   PSVY+QI+ +TK L++RSY L N +   A
Sbjct:  144 SKYDLTPKVAPFLDRHLVFPLLEFLQKEKIFPVDDIMKAKIDLLGKTNMVDYAMDIHKGLYNTEDVPQEMVERRVEVIGNLKALEEAAAPLISFLQNPSMVQE--------------------LRSEKQYNLQMLQERYQIGPEQIEGLYQYAKFQFDCGNYSAAADYLYQYRALCT------NNDRGVSALWGKFAAEILMLNWDAAMEEMNRLKEVIDSKSFSSPLLQLQQRTWLMHWSLFVFFNHENGRNGIIELFFQERYMNAIQTNAQHLLRYLATAVIVNKRR----RNMLKDLIKVIQQEHYTYADPITEFLECLYVNYDFEGAQKKLRECEEVIATDYFISPFSDEFIENARLFIFETYCRIHQCIDIRMLSVRLNMNDDDAERWILNLIRNAKLDAKIDAKAGTVVMGTQHPSVYEQIIERTKGLSMRSYMLANAVASTA 562          
BLAST of mRNA_P-littoralis_Contig613.13.1 vs. uniprot
Match: A0A087YMV4_POEFO (Eukaryotic translation initiation factor 3 subunit E n=2 Tax=Poecilia TaxID=8080 RepID=A0A087YMV4_POEFO)

HSP 1 Score: 375 bits (963), Expect = 6.530e-118
Identity = 204/471 (43.31%), Postives = 303/471 (64.33%), Query Frame = 2
Query:  233 SKYDLTRTISKYLDLHMMFPLLDFVEVSKMYPADQVAQARLDLLDATNMSDYAMEIYRSLNNTAEDPPDMVERRAEVFARMSALKGEAGVLTEIFMDKAAVEKASMTQVDHSSFTPQQLAVEKLIKEQNFTWKGIKAELKLEDSALESYYANAKFQSDCGDYVTAAAALKSYCEITQTPGVPGSGPNGMGALWGRLACEILVANWDGALTLLRELKGCIEFTN-APPLEQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEP-FMQAIQTNCPWLLRYLVTAIILTKAGAGGGKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQARLEECERVLLSDFFLCNCAGEFMEAARHFIFETYCRIHHKIDIGMLADKMGMEIEAAEKWIVDLIRGSKLDAKIDSRDNNVIMGGTFPSVYQQIMGKTKDLTVRSYTLV-NMLKQLATDTANGVTPDPANYSGRGGG 1636
            ++YDLT  I+ +LD H++FPLL+F+ V ++Y  +++ + +LDLL  TNM D+AM++YR+L N  E P  + E+R EV A++  L+GE   + ++F D     +   ++     F       + L ++ N  +  + ++ + E   L++ Y  AKFQ +CG+Y  AA  L  +  +     VP +  N + +LWG+LA EIL+ NW+ A+  L  L+  I+  + + PL+ LQQR+WL+HWSLFVFFNH  GRD ++ LF  +P ++ AIQT CP +LRYL TA+I  K      + V++DL++V++QE + Y DP+TEF+E L V+FDFD AQ +L ECE VL++DFFL  C  +F+E AR FIFET+CRIH  I I MLADK+ M  E AE+WIV+LIR ++LDAKIDS+  +V+MG    S YQQ++ KTK L+ RS  LV N+ K+ A    N    +  N++G+ GG
Sbjct:    2 AEYDLTTKIAHFLDRHLVFPLLEFLSVKEIYNEEELLRGKLDLLSDTNMVDFAMDVYRNLYNDTEIPHTLREKRTEVVAQLKQLQGETEPIVKMFEDPETTRQMQSSRDGRMLF-------DYLEEKYNNLYNHLSSDFRQE--YLDTLYRYAKFQYECGNYSGAAEYLYFFRVL-----VPSTDRNALNSLWGKLASEILMQNWEAAMEDLTRLRETIDNNSVSSPLQSLQQRTWLIHWSLFVFFNHPKGRDNIIDLFLYQPQYLNAIQTMCPHILRYLTTAVITNK-DVRKRRQVLKDLVKVIQQESYTYKDPITEFVECLYVNFDFDSAQKKLRECESVLVNDFFLVACLEDFIENARLFIFETFCRIHQCISISMLADKLNMSAEEAERWIVNLIRNARLDAKIDSKLGHVVMGNNAISPYQQVIEKTKSLSFRSQMLVMNIEKKQAASNRN----ETPNWAGQEGG 453          
BLAST of mRNA_P-littoralis_Contig613.13.1 vs. uniprot
Match: A9SFG7_PHYPA (Eukaryotic translation initiation factor 3 subunit E n=5 Tax=Physcomitrium patens TaxID=3218 RepID=A9SFG7_PHYPA)

HSP 1 Score: 374 bits (959), Expect = 1.620e-117
Identity = 202/466 (43.35%), Postives = 295/466 (63.30%), Query Frame = 2
Query:  233 SKYDLTRTISKYLDLHMMFPLLDFVEVSKMYPADQVAQARLDLLDATNMSDYAMEIYRSLNNTAEDPPDMVERRAEVFARMSALKGEAGVLTEIFMDKAAVEKASMTQVDHSSFTPQQLAVEKLIKEQNFTWKGIKAELKLEDSALESYYANAKFQSDCGDYVTAAAALKSYCEITQTPGVPGSGPNGMGALWGRLACEILVANWDGALTLLRELKGCIEFTN-APPLEQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAIILTKAGAGGGKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQARLEECERVLLSDFFLCN-----------CAGEFMEAARHFIFETYCRIHHKIDIGMLADKMGMEIEAAEKWIVDLIRGSKLDAKIDSRDNNVIMGGTFPSVYQQIMGKTKDLTVRSYTLV-NMLKQLATDTAN 1591
            ++YDLT  ++ +LD H++FPLL+F++ +++Y  DQ+ +A+++LL  TNM DYAM+I++SL +T + P DMV+RRAEV  R+  L+  A  L     + A V++                    L  +Q +  + ++   ++    +E+ Y  AKFQ +CG+Y  A+  L  Y  +        +    + ALWG+LACEIL+ NWD A   +  LK  I+  + A PL QLQQR+WL+HWSLF+FFNH NG++ ++ LFF E ++ AIQTN   LLRYLVTA+I+ K      + V+++L++V++QE++ Y+DPVTEFLE L V++DF+GAQ +L ECE V++SDFFL                EFME AR FIFETYCRIH  IDIGML+ K+ M  + A +WI +LIR ++LDAKIDS+   V+MG   P++Y+QI+ KTK L  RSY L  N++   A  TA+
Sbjct:    2 AQYDLTAAVAPFLDRHLVFPLLEFLQENQLYSDDQILKAKIELLAKTNMVDYAMDIHKSLYHTEDVPQDMVDRRAEVVGRLKVLEESAAPLISFLQNPALVQE--------------------LRSDQQYNLQMLQERYQIGSDQIEALYQYAKFQFECGNYSGASDYLYQYRTLCT------NSERSISALWGKLACEILMQNWDVATEEVNRLKETIDSKSFASPLSQLQQRTWLMHWSLFIFFNHDNGKNGIIDLFFSERYLNAIQTNAHHLLRYLVTAVIVNKRR----RNVIKELIKVIQQERYTYSDPVTEFLECLYVNYDFEGAQQKLRECEEVIVSDFFLGKQLSENGFVTIPLRDEFMENARLFIFETYCRIHQCIDIGMLSQKLNMNYDDAARWIANLIRNARLDAKIDSKMGTVVMGTQSPNIYEQIIEKTKVLGQRSYALTSNLILTSAAVTAS 437          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig613.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8N1_ECTSI0.000e+092.13Eukaryotic translation initiation factor 3 subunit... [more]
A0A836CBR3_9STRA3.610e-17557.76Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2SQG8_9STRA7.820e-12948.00Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2GAP6_9STRA4.260e-12646.41Eukaryotic translation initiation factor 3 subunit... [more]
F0XWU6_AURAN6.600e-12147.31Eukaryotic translation initiation factor 3 subunit... [more]
A0A5J4XZT5_9CHLO5.250e-12045.05Eukaryotic translation initiation factor 3 subunit... [more]
UPI001F04876B9.010e-12046.71eukaryotic translation initiation factor 3 subunit... [more]
A0A388K4K2_CHABU3.870e-11944.10Eukaryotic translation initiation factor 3 subunit... [more]
A0A087YMV4_POEFO6.530e-11843.31Eukaryotic translation initiation factor 3 subunit... [more]
A9SFG7_PHYPA1.620e-11743.35Eukaryotic translation initiation factor 3 subunit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig613contigP-littoralis_Contig613:55398..63074 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G8N1
Preferred nameINT6
PFAMsPCI,eIF3_N
Model size2634
Max annot lvl2759|Eukaryota
KEGG rclassRC00006,RC00868,RC00887
KEGG koko:K03250,ko:K19562
KEGG ReactionR03182,R03231
KEGG Pathwayko00780,ko01100,ko03013,ko05160,map00780,map01100,map03013,map05160
KEGG ModuleM00123
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000184,GO:0000502,GO:0000956,GO:0001732,GO:0002181,GO:0002183,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003743,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005852,GO:0005886,GO:0006139,GO:0006351,GO:0006352,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006417,GO:0006446,GO:0006518,GO:0006725,GO:0006807,GO:0006950,GO:0006970,GO:0007275,GO:0008104,GO:0008135,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009314,GO:0009416,GO:0009628,GO:0009639,GO:0009640,GO:0009651,GO:0009791,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009908,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016282,GO:0016604,GO:0016605,GO:0017148,GO:0018130,GO:0019222,GO:0019438,GO:0019439,GO:0019538,GO:0022414,GO:0022607,GO:0022613,GO:0022618,GO:0030162,GO:0030371,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031331,GO:0031597,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032270,GO:0032434,GO:0032436,GO:0032501,GO:0032502,GO:0032774,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0034248,GO:0034249,GO:0034250,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0042176,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044451,GO:0044464,GO:0045182,GO:0045727,GO:0045732,GO:0045862,GO:0045947,GO:0046483,GO:0046700,GO:0047485,GO:0048367,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051098,GO:0051099,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051246,GO:0051247,GO:0051248,GO:0051641,GO:0060255,GO:0060341,GO:0061136,GO:0061458,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070196,GO:0070727,GO:0070993,GO:0071540,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0090567,GO:0097159,GO:0097659,GO:1900180,GO:1900182,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901800,GO:1902415,GO:1902416,GO:1902494,GO:1903050,GO:1903052,GO:1903362,GO:1903364,GO:1903827,GO:1903829,GO:1905214,GO:1905216,GO:1905368,GO:1905369,GO:1990904,GO:2000058,GO:2000060,GO:2000112,GO:2000113
Exons13
Evalue0.0
EggNOG OGsKOG2758@1|root,KOG2758@2759|Eukaryota
Ec32 ortholog descriptioneukaryotic translation initiation factor eIF3 e subunit
Ec32 orthologEc-22_002360.1
EC2.6.1.62,6.3.3.3
Descriptiontranslation initiation factor activity
Cds size1608
COG categoryJ
BRITEko00000,ko00001,ko00002,ko01000,ko03012,ko03051,ko04147
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791278.2175303-UTR-P-littoralis_Contig613:55397..555871680791278.2175303-UTR-P-littoralis_Contig613:55397..55587Pylaiella littoralis U1_48UTRP-littoralis_Contig613 55398..55587 +
1680791278.3948524-UTR-P-littoralis_Contig613:62238..630741680791278.3948524-UTR-P-littoralis_Contig613:62238..63074Pylaiella littoralis U1_48UTRP-littoralis_Contig613 62239..63074 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791278.2298253-CDS-P-littoralis_Contig613:55587..557761680791278.2298253-CDS-P-littoralis_Contig613:55587..55776Pylaiella littoralis U1_48CDSP-littoralis_Contig613 55588..55776 +
1680791278.2394657-CDS-P-littoralis_Contig613:56936..569941680791278.2394657-CDS-P-littoralis_Contig613:56936..56994Pylaiella littoralis U1_48CDSP-littoralis_Contig613 56937..56994 +
1680791278.2587433-CDS-P-littoralis_Contig613:57238..573271680791278.2587433-CDS-P-littoralis_Contig613:57238..57327Pylaiella littoralis U1_48CDSP-littoralis_Contig613 57239..57327 +
1680791278.2695568-CDS-P-littoralis_Contig613:57814..579191680791278.2695568-CDS-P-littoralis_Contig613:57814..57919Pylaiella littoralis U1_48CDSP-littoralis_Contig613 57815..57919 +
1680791278.2788267-CDS-P-littoralis_Contig613:58276..584741680791278.2788267-CDS-P-littoralis_Contig613:58276..58474Pylaiella littoralis U1_48CDSP-littoralis_Contig613 58277..58474 +
1680791278.2884316-CDS-P-littoralis_Contig613:58727..588821680791278.2884316-CDS-P-littoralis_Contig613:58727..58882Pylaiella littoralis U1_48CDSP-littoralis_Contig613 58728..58882 +
1680791278.3017874-CDS-P-littoralis_Contig613:59195..593011680791278.3017874-CDS-P-littoralis_Contig613:59195..59301Pylaiella littoralis U1_48CDSP-littoralis_Contig613 59196..59301 +
1680791278.3118303-CDS-P-littoralis_Contig613:59705..597951680791278.3118303-CDS-P-littoralis_Contig613:59705..59795Pylaiella littoralis U1_48CDSP-littoralis_Contig613 59706..59795 +
1680791278.3289497-CDS-P-littoralis_Contig613:60142..602111680791278.3289497-CDS-P-littoralis_Contig613:60142..60211Pylaiella littoralis U1_48CDSP-littoralis_Contig613 60143..60211 +
1680791278.3402972-CDS-P-littoralis_Contig613:60691..608201680791278.3402972-CDS-P-littoralis_Contig613:60691..60820Pylaiella littoralis U1_48CDSP-littoralis_Contig613 60692..60820 +
1680791278.3566394-CDS-P-littoralis_Contig613:61119..612481680791278.3566394-CDS-P-littoralis_Contig613:61119..61248Pylaiella littoralis U1_48CDSP-littoralis_Contig613 61120..61248 +
1680791278.3686075-CDS-P-littoralis_Contig613:61528..617461680791278.3686075-CDS-P-littoralis_Contig613:61528..61746Pylaiella littoralis U1_48CDSP-littoralis_Contig613 61529..61746 +
1680791278.3826053-CDS-P-littoralis_Contig613:62165..622381680791278.3826053-CDS-P-littoralis_Contig613:62165..62238Pylaiella littoralis U1_48CDSP-littoralis_Contig613 62166..62238 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig613.13.1prot_P-littoralis_Contig613.13.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig613 55588..62238 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig613.13.1

>prot_P-littoralis_Contig613.13.1 ID=prot_P-littoralis_Contig613.13.1|Name=mRNA_P-littoralis_Contig613.13.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=536bp
MSEAVEAVSATSATSKYDLTRTISKYLDLHMMFPLLDFVEVSKMYPADQV
AQARLDLLDATNMSDYAMEIYRSLNNTAEDPPDMVERRAEVFARMSALKG
EAGVLTEIFMDKAAVEKASMTQVDHSSFTPQQLAVEKLIKEQNFTWKGIK
AELKLEDSALESYYANAKFQSDCGDYVTAAAALKSYCEITQTPGVPGSGP
NGMGALWGRLACEILVANWDGALTLLRELKGCIEFTNAPPLEQLQQRSWL
LHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAIILTK
AGAGGGKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQARLEE
CERVLLSDFFLCNCAGEFMEAARHFIFETYCRIHHKIDIGMLADKMGMEI
EAAEKWIVDLIRGSKLDAKIDSRDNNVIMGGTFPSVYQQIMGKTKDLTVR
SYTLVNMLKQLATDTANGVTPDPANYSGRGGGDWGGRGRGRGRGGRSSGG
RGGRGVGDRGGRGSSDRGYQGRGGGRSSSRGGGDW*
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mRNA from alignment at P-littoralis_Contig613:55398..63074+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig613.13.1 ID=mRNA_P-littoralis_Contig613.13.1|Name=mRNA_P-littoralis_Contig613.13.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7677bp|location=Sequence derived from alignment at P-littoralis_Contig613:55398..63074+ (Pylaiella littoralis U1_48)
ATAGAGAGATAATTTGAGAGGAGGGGGGAGAAAGACGTTTAACGTGGTCG ATACGTTTGCGCACCTAAGAAATTGAGGGAGGCGATCGACAAGTGCACTC CGTCCATCCACATCTTTCCGAGAGCAAGGCGTTTGCGTTCAGGAAGGCGA GCGAGAGAGCGGCGATTACGGGAGGACAGGAGGAGGGAGCATGAGTGAAG CTGTTGAGGCCGTGTCGGCCACAAGCGCCACCAGCAAGTATGACCTCACG AGAACAATCAGCAAGTACTTGGATCTGCACATGATGTTTCCGCTGCTGGA CTTTGTGGAGGTGTCCAAAATGTACCCCGCAGACCAGGTTGCCCAGGCCC GCCTCGACCTGTTGGATGCCACGAACATGGTGCGTATGGTTGGGTGTGCT ATTCCCCTTTGGTGCACACAATGATGTATTACTCAAGAGGAGAAAAATAG GGGACAGTGTGGTCTTTGTTGTCGCAGCGCAACCGTACTTGCTTTGAGGA TGCTCGAGTGGAACCTCTATCCCAGGTACACAACTTTAACTTTGACCCTC GACTCTAGTGTGTATGGAGTTGGGCTGCCCATGGGATTCACCTGTGTGTG TGATCCCATTTATTCTGGGAACCAGTCTACACCTTTCGGCAGGAAGTACT TGTATGAAGTGGGTCAATCAGCCGGGGTCGCGCAGAAGGAAGGCCACGCA CACGAGCTTTTTCACTTTTTATTTTGTTTTATTGCCCAACCTTCCTCCTG CGGTACGTGCCTGTGGTTTTTCGTGCGAAACGGGTACAGCAATCCCTTCC CTCTCTTTGATCACGAGTACTTCGCTTTCCACTGTAAAGTCGCAAGAAAC GCTCTCAGAGAATCGAACCTACGACCTTACTACTAGTTGATTTAACAAGG GAACCACTAGACTACCGGTGCGACCGGTTACTTGACCGGTTACTTGAACT ACGAGATAAAAATAACCACACCCACACCGTTTCGCACCCTTCTGACTTTC AGTGCTGTATATGAACTGATTCACGTGCATACGTGCATTTATAGGGGCGG ACTCCCCGTAATGTTCAGCTGCCCCTTTGTTAGAGCAGTAGTACCTCGAA GTATGCTTATGTGAATGGGAATGTCCGATGCATATGGTGTTCTTTCGTCA ACGATTCTTACTGCTGTGTTCGCGTAGGGGCGCAAATTGAAATCCCACCT CACATACCTGCACTGAGCATCGTCACTTTTCTATAAGAACCATTCCGCAT GCCGCCCGTTCTCCTGTCTCTCTTTTCCCATTGCATCTATCAACTTTCGA CTCGATAACATAAGTCGGTGGGCTTGGAGTGTGCTGTTTCTCTGTGTAAA CCGCGGCCTGGTTTTACACAGTCATAGCACACATCAAGATCACCAACCCA CACTCGGATGTGCGAAGTGCAGTTGAGTTGCGATGGCTCACCCTCCACGC CGACCGTCACCTTGCCTAATGGCAATCATTCGTATCAACCAACGACGACG GACACCGCCCTTTCGCCTTTGGCTCGTCATTTCCTGCAGAGCGACTACGC CATGGAGATATACAGGAGCCTCAACAACACCGCCGAGGACCCTCCTGGTA AGAGGAGGAGAGAGAGGGCACCCCAGATGAAAGCGCTGCCGGCGTACATG ATCGTGTATCCTGCTTACACGTTGGGAAACTTTTTAAGTTTCCTGCGTTT TTGCCACGTGGTTTCCGTTGCAAGTATTTGATAGCTTGACCGCCGACGTC ATTGTGTTGCATGCACACTTGATTGGCACGTAACGACGTCCGTGTGCCAC GTTGTTTATGGATTCGATGGTTCTGTGTGCGATACCAACAGACATGGTGG AGCGTCGCGCGGAGGTTTTCGCTCGTATGTCTGCTCTGAAGGGGGAGGCC GGTGTCCTCACCGAGATCTTCATGGACAAGGTAAGTCGGGATGTACACTC GATGTGCGCTATGGCCCCGGACAACACCGCAGTGATCGTGCAGTCGTTTG TGTTTTCTTTTGATGAGATCAATGCCGAGAATGGAGGTTTGTGGAACGTA TCAACAAGAAACGGTACTACTGCCGTGCCGTCTCTTCGCGTGTAAATACA CGATACGAATAGGCTACAGCAAGCGGCTCTGGTGTGATGTTTGGTTTGTC AACGCTTTGCTATTTCTTTGGGATCCTGCCCATGACGTCGTGTGCATACG ACTCCAGCTGTGGTCCACCCTCGTCCTTTTGCCCATTCCGATCTCCTTCG AAACAATACTCTACAGCCGACTGTAAAAGTCAAGCGCGCCCTCGATGATC GTTGTACACACGCCGCATTCGCTGCTGAAACTAGCTCAAGCTCGCATGGT ATCACTGGTTGCTGCTTTTTACTTCGTATCATGTGGTTTCATCACATACA CCCGTTTTCGTGATCAGGCCGCCGTGGAAAAAGCGTCGATGACCCAGGTA GACCACAGCAGCTTCACCCCGCAGCAGTTGGCGGTGGAGAAGCTAATCAA GGAACAGAACTTCACCTGGAAGGTACGGGATCGCTGCGCGACGCGGTGTC CAAGTAGTAACTCCGTGAAGCGGTTAGACCGGTACGACACAAATTGACGA AATTAAATCATGGGCTCGATCAACTGCTGTCGATATACACGCTTGAACAG CTTGAAACAGCCCCCTTTGACTGCCTGCATCGCCATCAGCGTTGGCGCAG TAGTGACCTGTGTCCCCTTGTGTTGTCGCACCGCTTCTATCCCAAGGGCT TCTTTCGTTTTGCATTTGCAACGCCGCATGATTCCGAACCCGAAAGCGAA GCATTTGCAGCAAAGCAATTTGTGGCGATTGATGCATCTGATTTTCGTAA GTTTTTCTCGGCTTACATGTGATACGCAGGGCATCAAAGCCGAGCTGAAA CTGGAGGACTCTGCCCTCGAGTCGTACTACGCCAATGCCAAGTTCCAGTC GGACTGCGGAGACTACGTAACGGCCGCCGCCGCCCTCAAGAGCTACTGCG AAATCACGCAGACGCCTGGAGTTCCTGGCAGCGGCCCGAACGGCATGGGC GCTCTGTGGGGCCGTCTTGCCTGCGAGGTACAGTGGGGGTGCTTGGCTTG TGCATGGCGCGTTGCGTATGTCTTTCTTCCGTTTCAGTTACGACGCCCCA TGGTACCTGTCTCACGTGGCACGTGAAAAACGAACCGTACTTGATGTCGC AGCAAGAGCGGAGGGTGGAATGCCATACCCGAACGCTCCTTCCTCATGCG CTTGCCCCAAAGCATGTCTGTAACTCACAGTACATAAGTTATGAATGCTA CTGTGTTCACTACTTTGGTGCATCGTGCAGATCCTTGTGGCCAACTGGGA CGGCGCGTTGACGTTACTGCGGGAGCTGAAGGGCTGCATCGAGTTCACCA ACGCGCCCCCGTTGGAGCAGCTTCAGCAAAGGAGCTGGCTTTTGCACTGG AGCTTGTTCGTGTTCTTCAACCACGCCAACGGCAGGTTAGTTTTGGAAGC CCTGGTAGAGCTGTCTCTGGTTGGAACCGAGGGGTGGACAGTGCGTGTCG TGTCAAGCAGGAAGTCAATCATTCTTCTCCCGACCTTGTCTTGGTCTGAT GATGCCAACATTTTTGGCGCGTGCGACCTTGTGTCTGTCGCTCTCTTGTG TTTATTCCGACCACGTGCAGAATAGTCGCGACACGAGCGTCAGCGTACCG TGTTGAGAAAGGCCCACTTGCTCATGAGTTTGTCAACATGCCGTAGCTTT TTTCGTTTTTGCCTCTTATTGTTTGCTTCGCCGGTGGTGGCGACACAGGG ATGAGCTGGTAACGCTATTTTTTGAGGAGCCGTTCATGCAGGCCATCCAG ACCAACTGTCCGTGGCTGCTTCGGTATTTGGTGACAGCGATCATTCTGAC CAAGGTGATGTGAACTCGTTTGGGTCGAACCCCACTACTGTATCCTAATT CGTGGGGAGCGTACTGACGGATCTATTGTTGCTCTAATGAAGCTCGACTA TTCTCCTGGCAAAAAATAAAACACTAAATCTGTTGATGTGATGGACTGTC GCAACACGAGCTAAAGTACGTCGAGAAGGAGCCACCTATATCGTGTTCAA CACAACACATCAAAACTGTGTATTTTAGTTACCTTCTGTGCGTACCGTTT CGCCGAGGTGGCGATAGACGGAGGTTTGCCTGTTGCAGCACACGAATCGA ATGAAAACTCCGTCATGGCAGTACTGATACTACTGCTGTGATTTGGCATC TACTGACTCGGCACAGTCCCCCGTATGCTGCCTCTTTCTGCATTTGTTGT GATCGCAGGCGGGAGCAGGAGGCGGGAAGTACGTGATGCGCGACTTGATG AGGGTGCTTGAGCAAGAAAAGCACGCCTACACCGACCCCGTGACAGAGGT ACGCATGCATTTCGCCCCACGTACGTCTCCACGCGGCGTGTCTGGCTAGA TTTGTCAAGTATCTCCTTGTGGAAGAGTCTCCGATCACCGCAACACCATA CTCACCTTCTGATCACCCCGCACTCCCTCTTGGCATAGTCCCGCAACACT TCTTAGAGGCGACTAATATTCTCGCTTGACATTTGTGTGGTGCGATTGCA TCCCTTCTGCTTTGTCGTTTGCACTTCCATGTGCTCGTTCGTATTTCTCT CTCCTCTGTTACCTTGCAAGTTTGAATGGGTCCTTTCCGTCTCTTGTGCT GTTCGTCCGTTGTCTTGCGTTCGTTTACTTTTGTTTATGAAACAGTTCTT GGAGGGTCTACAGGTTTCTTTCGACTTCGACGGCGCACAGGCACGGCTCG AGGAGTGCGAGCGGGTGAGACATAGGATGTCAAGGGATGACACTTCCTGA TGCGTAAAGGGGTACGGTGTGTTCGTCTTTCGTGTGGAATCATTCTGACC TACTTCGTGTATACTGTTGACCGTACTGTGTGGGATTTGAGACTCCTCAT CCGGCCTCGCTCGAACCATGCTGCGGAAGGGTGCTGTATGAAACGCGCGT ACGGCCTGTGTGCGGTCGCCCTCTTGTTCGTGCTTCGGCCAGCGCATCTT ATCCTTTTGATTGTGTTTCTTTTTTCGTCTGTATTTTGCCCCTTTTTCTT CGTCGAAGCGCACGCACATTTGGCGCCACTTGTGCTGCCGCCTACGGGTA TTTTGTTTCACAACGCCGCGTCAACGATGTGTCTGGATGCTCCAAAAGCT GTTTACATTGTAACTGAACGTGATTGAACAATCCATACGTACCTGGTAAA ACCTGATGTTGTGTGGTGCACGGTCTTATGCGAAATCGTGCCAGGTGCTT CTAAGCGACTTCTTTCTGTGCAACTGTGCCGGCGAGTTCATGGAAGCGGC CCGTCACTTCATCTTCGAGACCTACTGCCGTATACACCACAAGATCGACA TCGGCATGCTCGCAGACAAGATGGTGCGTACGAAGTATTTTTGTGTGATG CAAGGTTTGTGGTGATTGCCGCCAAGGTTATACAGCAGGAAGTGGTGAAT TTGGGCAGCATTTCCGGAAAGAACAAATACTCCGGAACGAAAATACTTCT TTTTCAGGTCTAGGCATGTATGGAACGATTAGAATTGGTCGTGTAACGCT TTCCTGAATGGTTTATTTTAGGCCGTGTCCATGGTGCTCCCCTACGCCAC ACTGCTGCTCAAGTGTCTGCTGTTAGTGGCGGTGGTCTGATCCTCGTTGG CGTTTGTATTTCTGTTCCCCAGGGTATGGAGATCGAAGCCGCTGAAAAGT GGATAGTCGACCTCATCAGGGGCTCCAAGCTGGACGCCAAGATCGATTCT CGCGACAACAACGTAATCATGGGCGGCACATTCCCCTCCGTTTATCAGCA GGTGTGACCAGTTATTTCCCACTCACAGGACTGTGGGCACTAGTTTCGGC ATTCCAAACTATTCACTCATAACCGTACGAAACAGCATAGTGTTTTCGTG AGAAAAGATGGCGGTGGTAAAAGAGAGCGCTACTTAAGAGCGATCTGCGG TGTAGTTTACGAACCGGTATTCGTTTTGACCATTTTTGTGCGTTGTGCCT ACCTCTCTAAAGTTCTAATTGGCCACCCTCGTTAGTCGTCATGACCATGT CGCTCCTCCCCCTCCTTCTCACATGAAATAGATCATGGGAAAGACTAAAG ACCTGACAGTACGGAGCTACACGCTAGTCAACATGCTCAAGCAGCTAGCC ACCGACACCGCAAACGGAGTGACGCCCGATCCAGCCAACTACAGCGGTCG CGGGGGCGGCGACTGGGGCGGGCGGGGTCGCGGGAGGGGGAGGGGCGGCC GGAGCAGCGGTGGACGTGGAGGTCGCGGGGTAGGCGACCGGGGGGGCAGG TACGCCTCTTGTTTGTGTTGGGGCGCCTTCAGGGCAATATTTTGCGGCGC GTTCAGCGACTCGACTGGTTTGTCATTGCGATTTTGGGACATGTTGCGAC TTTTTTTGTGTTTCGAGCGTCATCGCGACTCGTGTAAGATTGTCTATTTT CTGTTCCTATGTACCTGGTGCGCACGCACCGGACCCCCGACAAACGGAGA GGGGCGCTGGAGGTGCAGTTGGTGCCTCGAAAACGGCCGGAAGACGCGCT ACTGTACGACGGCAGCCTTCAACTGCCGCTTCCCGTGAAATCAAAACCTC GGGCACGAGTCATGCCACGCCGTGTTGTTGTCTTTTCAACGGTCATGCTG GAAGCATAAATATTGCCATCCTTCTCATAACATCTACAACCCTTCGGTTG TCCGTTCCGTGTTTGCAGAGGTAGCAGTGACAGGGGCTACCAGGGGCGAG GGGGCGGCAGGAGCAGTTCTCGTGGTGGCGGAGACTGGTAACAACGGAAC GAGCCTTTGCGAGCAACTCAAGGGAGGAGTTTCTCGTGCGGTTTATGTCG CAGGACGGATGGATCTATGTGGTCCGACAGCTGTTGGGCTTGAACTTATT ATTTTCGGGGCGTCATTTTTAACAGCGGGGCGAGTGTTTTGTCACACAAC TCAAACGTTGCTCGTTTCTTGGTTAAGGTAGCTTTGGTCGTCGCCGCCTC CCCTGCGAGACGAGCGCACAACACGAGGGTCTGTAGTCGACTGCTGTTGC TCGCTCTTTTTGTGGCGTTGGATGGGCACGATGTTTATGTCGCAGGGTGG GTCCAAGTTGTTGCAGCAGGAGTCGACTTTGTTCTTGGCTTGCGGTCTGT CCCGGAACGTCCACCGTCTTATCTCGACGTGTCTTTTTCCGCCGAGACTT CCAGGACGTTGCACCGTAGCCTTTGTTGAAACATGATATTTTCTTCCACT TCTGGACGTCCTGCGTTGACGGCTGACTTTCACACAAAATAAAAAAATGG CGCTCTCGACTCTCGCAGTTGGTGGTTAACTACTGAAGCTTCGACCCGAA TTCAACATGTCTCGTCGTAGCCTCATCAGGGTCGGCTCGATGTAGATGAA GTGAGCAGCAGCGTTCAAGTATGCGTGTTGGATCCAGCACTGCTGTGCAT AGGTTGGCGTCGGAACAACATCGAACATACCAGCGCGGATATCGGTTGAT GTGTGTGTGCGGCATGCATGTGCTGAAAGGATAAGCCACAAACGCAACAG CGGAACCCCCACGCACGTTGTTCATTTACATCAACGGGACCGGCAACCTA CCCGCGGGTTCGTACTCACGTATTCGC
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Coding sequence (CDS) from alignment at P-littoralis_Contig613:55398..63074+

>mRNA_P-littoralis_Contig613.13.1 ID=mRNA_P-littoralis_Contig613.13.1|Name=mRNA_P-littoralis_Contig613.13.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1608bp|location=Sequence derived from alignment at P-littoralis_Contig613:55398..63074+ (Pylaiella littoralis U1_48)
ATGAGTGAAGCTGTTGAGGCCGTGTCGGCCACAAGCGCCACCAGCAAGTA
TGACCTCACGAGAACAATCAGCAAGTACTTGGATCTGCACATGATGTTTC
CGCTGCTGGACTTTGTGGAGGTGTCCAAAATGTACCCCGCAGACCAGGTT
GCCCAGGCCCGCCTCGACCTGTTGGATGCCACGAACATGAGCGACTACGC
CATGGAGATATACAGGAGCCTCAACAACACCGCCGAGGACCCTCCTGACA
TGGTGGAGCGTCGCGCGGAGGTTTTCGCTCGTATGTCTGCTCTGAAGGGG
GAGGCCGGTGTCCTCACCGAGATCTTCATGGACAAGGCCGCCGTGGAAAA
AGCGTCGATGACCCAGGTAGACCACAGCAGCTTCACCCCGCAGCAGTTGG
CGGTGGAGAAGCTAATCAAGGAACAGAACTTCACCTGGAAGGGCATCAAA
GCCGAGCTGAAACTGGAGGACTCTGCCCTCGAGTCGTACTACGCCAATGC
CAAGTTCCAGTCGGACTGCGGAGACTACGTAACGGCCGCCGCCGCCCTCA
AGAGCTACTGCGAAATCACGCAGACGCCTGGAGTTCCTGGCAGCGGCCCG
AACGGCATGGGCGCTCTGTGGGGCCGTCTTGCCTGCGAGATCCTTGTGGC
CAACTGGGACGGCGCGTTGACGTTACTGCGGGAGCTGAAGGGCTGCATCG
AGTTCACCAACGCGCCCCCGTTGGAGCAGCTTCAGCAAAGGAGCTGGCTT
TTGCACTGGAGCTTGTTCGTGTTCTTCAACCACGCCAACGGCAGGGATGA
GCTGGTAACGCTATTTTTTGAGGAGCCGTTCATGCAGGCCATCCAGACCA
ACTGTCCGTGGCTGCTTCGGTATTTGGTGACAGCGATCATTCTGACCAAG
GCGGGAGCAGGAGGCGGGAAGTACGTGATGCGCGACTTGATGAGGGTGCT
TGAGCAAGAAAAGCACGCCTACACCGACCCCGTGACAGAGTTCTTGGAGG
GTCTACAGGTTTCTTTCGACTTCGACGGCGCACAGGCACGGCTCGAGGAG
TGCGAGCGGGTGCTTCTAAGCGACTTCTTTCTGTGCAACTGTGCCGGCGA
GTTCATGGAAGCGGCCCGTCACTTCATCTTCGAGACCTACTGCCGTATAC
ACCACAAGATCGACATCGGCATGCTCGCAGACAAGATGGGTATGGAGATC
GAAGCCGCTGAAAAGTGGATAGTCGACCTCATCAGGGGCTCCAAGCTGGA
CGCCAAGATCGATTCTCGCGACAACAACGTAATCATGGGCGGCACATTCC
CCTCCGTTTATCAGCAGATCATGGGAAAGACTAAAGACCTGACAGTACGG
AGCTACACGCTAGTCAACATGCTCAAGCAGCTAGCCACCGACACCGCAAA
CGGAGTGACGCCCGATCCAGCCAACTACAGCGGTCGCGGGGGCGGCGACT
GGGGCGGGCGGGGTCGCGGGAGGGGGAGGGGCGGCCGGAGCAGCGGTGGA
CGTGGAGGTCGCGGGGTAGGCGACCGGGGGGGCAGAGGTAGCAGTGACAG
GGGCTACCAGGGGCGAGGGGGCGGCAGGAGCAGTTCTCGTGGTGGCGGAG
ACTGGTAA
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