prot_P-littoralis_Contig613.7.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig613.7.2
Unique Nameprot_P-littoralis_Contig613.7.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length146
Homology
BLAST of mRNA_P-littoralis_Contig613.7.2 vs. uniprot
Match: D7G8N0_ECTSI (50S ribosomal protein L24, chloroplastic n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8N0_ECTSI)

HSP 1 Score: 265 bits (676), Expect = 7.910e-89
Identity = 138/145 (95.17%), Postives = 141/145 (97.24%), Query Frame = 0
Query:    1 MKLNPNKASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVRKGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRKALLERKDRTRSGGKPAAGAADADVNMAGVD 145
            MKLNPN ASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEK+NVRSLPVR GDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDR ALL RKDR+R+GGKPAAGAADADVNMAGVD
Sbjct:   27 MKLNPNVASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKYNVRSLPVRAGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRVALLARKDRSRNGGKPAAGAADADVNMAGVD 171          
BLAST of mRNA_P-littoralis_Contig613.7.2 vs. uniprot
Match: A0A835YVZ0_9STRA (50S ribosomal protein L24, chloroplastic n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVZ0_9STRA)

HSP 1 Score: 196 bits (498), Expect = 4.220e-62
Identity = 105/145 (72.41%), Postives = 119/145 (82.07%), Query Frame = 0
Query:    1 MKLNPNKASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVRKGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRKALLERKDRTRSGGKPAAGAADADVNMAGVD 145
            MK+NPN +SSRRKSRKAHF A S  RR++MSA LSK+L  K+NVRS+PVRK DEVMVVRG YKNREGKV  CYRRK+VIHIER+TREKANG TV +GIHPSKV ITK+K+DKDRK LLERK R    G  A  A++ DVNMAGVD
Sbjct:    1 MKVNPNVSSSRRKSRKAHFTAPSHQRRIIMSASLSKELQAKYNVRSVPVRKDDEVMVVRGHYKNREGKVTACYRRKYVIHIERVTREKANGATVQIGIHPSKVVITKLKLDKDRKELLERKQRKSKAG-AAKKASEKDVNMAGVD 144          
BLAST of mRNA_P-littoralis_Contig613.7.2 vs. uniprot
Match: A0A451FLG4_9STRA (50S ribosomal protein L24, chloroplastic n=1 Tax=Eustigmatophyceae sp. Mont 10/10-1w TaxID=2506145 RepID=A0A451FLG4_9STRA)

HSP 1 Score: 181 bits (460), Expect = 2.650e-56
Identity = 99/145 (68.28%), Postives = 113/145 (77.93%), Query Frame = 0
Query:    1 MKLNPNKASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVRKGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRKALLERKDRTRSGGKPAAGAADADVNMAGVD 145
            MK NPN +SSRRKSRKAHF A S  RRVLMSA LSKDL  K+ VRS+P+RK DEV VVRG +KN +GKV   YR+KFVIHI+RITREKANG TV+VGIHPSKV ITK+KM+K RKA+LERK R     K      +ADVN+AGVD
Sbjct:    1 MKFNPNVSSSRRKSRKAHFSAPSHMRRVLMSAPLSKDLQAKYKVRSMPIRKEDEVTVVRGRHKNSDGKVTQVYRKKFVIHIDRITREKANGATVNVGIHPSKVVITKLKMNKSRKAILERKARKSDADKAKGKFTEADVNLAGVD 145          
BLAST of mRNA_P-littoralis_Contig613.7.2 vs. uniprot
Match: A0A3R5U3L5_9STRA (50S ribosomal protein L24, chloroplastic n=4 Tax=Eustigmatophyceae TaxID=5747 RepID=A0A3R5U3L5_9STRA)

HSP 1 Score: 181 bits (458), Expect = 5.510e-56
Identity = 95/145 (65.52%), Postives = 116/145 (80.00%), Query Frame = 0
Query:    1 MKLNPNKASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVRKGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRKALLERKDRTRSGGKPAAGAADADVNMAGVD 145
            +K NPN +SSRRKSRK HF A S  RR++MSA LSKDL  K+ VRS+P+RK DEV VVRG++KNR+GKV   YR+KFVIHI+R+TREKANG TV+VGIHPSKV ITK+K++K RKA+LERK RT +  K      +ADVN+AGVD
Sbjct:    2 VKFNPNVSSSRRKSRKQHFTAPSHVRRIIMSAPLSKDLRAKYKVRSIPIRKEDEVTVVRGSFKNRDGKVTQVYRKKFVIHIDRVTREKANGATVNVGIHPSKVIITKLKLNKSRKAILERKARTSAADKNKGKLTEADVNLAGVD 146          
BLAST of mRNA_P-littoralis_Contig613.7.2 vs. uniprot
Match: A0A7S2C9Q4_9STRA (50S ribosomal protein L24, chloroplastic n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C9Q4_9STRA)

HSP 1 Score: 179 bits (454), Expect = 1.970e-55
Identity = 93/145 (64.14%), Postives = 116/145 (80.00%), Query Frame = 0
Query:    1 MKLNPNKASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVRKGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRKALLERKDRTRSGGKPAAGAADADVNMAGVD 145
            MK +PN +S R KSRKAHF A S  +R +MSA LSKDL  K+NVRS+P+RK DEVMVVRG++KNREGKV   YR+K+VIHIER++R+KANG  V++GIHPS   ITK+K+DKDRK +L+RKDR++   K   G +DADVNMAGVD
Sbjct:    1 MKFSPNVSSDRNKSRKAHFTASSSQKRKIMSASLSKDLVSKYNVRSMPIRKDDEVMVVRGSHKNREGKVIQVYRKKYVIHIERVSRDKANGAPVNIGIHPSNCVITKLKLDKDRKNILDRKDRSKDSSK---GLSDADVNMAGVD 142          
BLAST of mRNA_P-littoralis_Contig613.7.2 vs. uniprot
Match: A0A7J6P5Z0_PEROL (60S ribosomal protein L26 n=7 Tax=Alveolata TaxID=33630 RepID=A0A7J6P5Z0_PEROL)

HSP 1 Score: 179 bits (453), Expect = 2.880e-55
Identity = 95/145 (65.52%), Postives = 117/145 (80.69%), Query Frame = 0
Query:    1 MKLNPNKASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVRKGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRKALLERKDRTRSGGKPAAGAADADVNMAGVD 145
            MK +P  +SSRRKSRKAHF A S+ RR++MSA LSK+L  K+NVRS+P+RK DEVMVVRG Y +REGKV  CYR+KFVIHIER+TR+K NG+  +VG+HPSKV ITK+KMDKDRKALLERK+R++  GK +    + DV MA VD
Sbjct:    1 MKFSPAVSSSRRKSRKAHFTAPSDQRRIIMSAPLSKELRAKYNVRSVPIRKDDEVMVVRGHYSDREGKVTACYRKKFVIHIERLTRDKVNGSHANVGVHPSKVVITKLKMDKDRKALLERKNRSKDSGKKSY--TEKDVAMAQVD 143          
BLAST of mRNA_P-littoralis_Contig613.7.2 vs. uniprot
Match: T0Q9Y6_SAPDV (50S ribosomal protein L24, chloroplastic n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0Q9Y6_SAPDV)

HSP 1 Score: 178 bits (452), Expect = 4.230e-55
Identity = 95/145 (65.52%), Postives = 111/145 (76.55%), Query Frame = 0
Query:    1 MKLNPNKASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVRKGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRKALLERKDRTRSGGKPAAGAADADVNMAGVD 145
            MK N    SSRRK RKAHFGAHS  RRVLMSA LSKDL  K+NVRS+P+RK DEV +VRG++KNREG+V  CYR+KFVIH+ER+ +EK NG  V VGIHPSKV ITK+K+DKDRK +LERK+R   G K      +ADV MA VD
Sbjct:    1 MKFNSTVTSSRRKCRKAHFGAHSTQRRVLMSANLSKDLQSKYNVRSMPIRKDDEVTIVRGSFKNREGRVTQCYRKKFVIHVERVVKEKVNGAAVPVGIHPSKVVITKLKLDKDRKKILERKNRA-VGDKNKGKFTEADVAMANVD 144          
BLAST of mRNA_P-littoralis_Contig613.7.2 vs. uniprot
Match: A0A7S2V566_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V566_9STRA)

HSP 1 Score: 177 bits (448), Expect = 1.770e-54
Identity = 92/145 (63.45%), Postives = 110/145 (75.86%), Query Frame = 0
Query:    1 MKLNPNKASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVRKGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRKALLERKDRTRSGGKPAAGAADADVNMAGVD 145
            MK+    +SSRRKSRKAHF AHS ARRV+MSA LSKDL  K+NVRS+P+RK DEV V RG +KNREGKV  CYR+K+V+H+ER T+EK NG  VHVGI PS V ITK+K+DK+RKA+LERKDR +   K      + DVNM  VD
Sbjct:    1 MKVKNTVSSSRRKSRKAHFSAHSTARRVIMSAPLSKDLQAKYNVRSMPIRKDDEVQVTRGYFKNREGKVVQCYRKKYVVHVERCTKEKTNGAQVHVGIAPSNVVITKLKLDKNRKAILERKDRAKGAEKGKGKYTETDVNMGNVD 145          
BLAST of mRNA_P-littoralis_Contig613.7.2 vs. uniprot
Match: A0A7S3LFZ3_9STRA (50S ribosomal protein L24, chloroplastic n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LFZ3_9STRA)

HSP 1 Score: 176 bits (446), Expect = 3.250e-54
Identity = 95/145 (65.52%), Postives = 112/145 (77.24%), Query Frame = 0
Query:    1 MKLNPNKASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVRKGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRKALLERKDRTRSGGKPAAGAADADVNMAGVD 145
            MK NPN +S+RRKSRKAHFG+HS ARR LMSA LSK+L EK+NVRSLP+RK DEV + RG +KNREGKV   YR+KFVIH+ER+ R+KANG     GIHPSKV ITKIK+DKDRKALL+RK++     K      DADV M+ VD
Sbjct:    1 MKFNPNVSSARRKSRKAHFGSHSTARRKLMSAPLSKELQEKYNVRSLPIRKDDEVTIARGTFKNREGKVIQVYRKKFVIHVERVLRDKANGGNFPAGIHPSKVIITKIKLDKDRKALLDRKNKLE---KDKGKFTDADVAMSNVD 142          
BLAST of mRNA_P-littoralis_Contig613.7.2 vs. uniprot
Match: A0A1V9ZGA6_9STRA (50S ribosomal protein L24, chloroplastic n=2 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZGA6_9STRA)

HSP 1 Score: 176 bits (446), Expect = 5.400e-54
Identity = 94/144 (65.28%), Postives = 110/144 (76.39%), Query Frame = 0
Query:    2 KLNPNKASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVRKGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRKALLERKDRTRSGGKPAAGAADADVNMAGVD 145
            K N    SSRRK RKAHFGAHS  RRVLMSA LSKDL  K+NVRS+P+RK DEV +VRG++KNREG+V  CYR+KFVIH+ER+ +EK NG  V VGIHPSKV ITK+K+DKDRK +LERK+R   G K      +ADV MA VD
Sbjct:   16 KFNSTVTSSRRKCRKAHFGAHSTQRRVLMSANLSKDLQAKYNVRSMPIRKDDEVTIVRGSFKNREGRVTQCYRKKFVIHVERVVKEKVNGAAVPVGIHPSKVVITKLKLDKDRKKILERKNRA-IGDKNKGKFTEADVAMANVD 158          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig613.7.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8N0_ECTSI7.910e-8995.1750S ribosomal protein L24, chloroplastic n=2 Tax=E... [more]
A0A835YVZ0_9STRA4.220e-6272.4150S ribosomal protein L24, chloroplastic n=1 Tax=T... [more]
A0A451FLG4_9STRA2.650e-5668.2850S ribosomal protein L24, chloroplastic n=1 Tax=E... [more]
A0A3R5U3L5_9STRA5.510e-5665.5250S ribosomal protein L24, chloroplastic n=4 Tax=E... [more]
A0A7S2C9Q4_9STRA1.970e-5564.1450S ribosomal protein L24, chloroplastic n=1 Tax=F... [more]
A0A7J6P5Z0_PEROL2.880e-5565.5260S ribosomal protein L26 n=7 Tax=Alveolata TaxID=... [more]
T0Q9Y6_SAPDV4.230e-5565.5250S ribosomal protein L24, chloroplastic n=4 Tax=S... [more]
A0A7S2V566_9STRA1.770e-5463.45Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3LFZ3_9STRA3.250e-5465.5250S ribosomal protein L24, chloroplastic n=1 Tax=A... [more]
A0A1V9ZGA6_9STRA5.400e-5465.2850S ribosomal protein L24, chloroplastic n=2 Tax=A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005824KOWSMARTSM00739kow_9coord: 48..75
e-value: 8.5E-6
score: 35.3
IPR005824KOWPFAMPF00467KOWcoord: 51..82
e-value: 1.3E-6
score: 28.1
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 1..140
e-value: 4.3E-48
score: 164.9
IPR005756Ribosomal protein L26/L24, eukaryotic/archaealPFAMPF16906Ribosomal_L26coord: 9..121
e-value: 7.2E-36
score: 122.8
IPR005756Ribosomal protein L26/L24, eukaryotic/archaealTIGRFAMTIGR01080TIGR01080coord: 9..121
e-value: 1.1E-43
score: 146.3
IPR005756Ribosomal protein L26/L24, eukaryotic/archaealPANTHERPTHR1114360S RIBOSOMAL PROTEIN L26 FAMILY MEMBERcoord: 1..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..145
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
IPR005825Ribosomal protein L24/L26, conserved sitePROSITEPS01108RIBOSOMAL_L24coord: 52..69
IPR041988Ribosomal protein L26/L24, KOW domainCDDcd06089KOW_RPL26coord: 52..105
e-value: 1.32285E-13
score: 59.8358
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 9..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig613contigP-littoralis_Contig613:51466..55106 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig613.7.2mRNA_P-littoralis_Contig613.7.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig613 50442..55142 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig613.7.2 ID=prot_P-littoralis_Contig613.7.2|Name=mRNA_P-littoralis_Contig613.7.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=146bp
MKLNPNKASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVR
KGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHP
SKVQITKIKMDKDRKALLERKDRTRSGGKPAAGAADADVNMAGVD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005824KOW
IPR014722Rib_L2_dom2
IPR005756Ribosomal_L26/L24P_euk/arc
IPR005825Ribosomal_L24/26_CS
IPR041988KOW_RPL26/RPL24
IPR008991Translation_prot_SH3-like_sf