mRNA_P-littoralis_Contig613.7.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig613.7.2
Unique NamemRNA_P-littoralis_Contig613.7.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig613.7.2 vs. uniprot
Match: D7G8N0_ECTSI (50S ribosomal protein L24, chloroplastic n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8N0_ECTSI)

HSP 1 Score: 274 bits (700), Expect = 3.920e-87
Identity = 142/150 (94.67%), Postives = 145/150 (96.67%), Query Frame = 1 
Query:   22 CSSTDMKLNPNKASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVRKGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRKALLERKDRTRSGGKPAAGAADADVNMAGVD 471
            CSS DMKLNPN ASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEK+NVRSLPVR GDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDR ALL RKDR+R+GGKPAAGAADADVNMAGVD
Sbjct:   22 CSSFDMKLNPNVASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKYNVRSLPVRAGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRVALLARKDRSRNGGKPAAGAADADVNMAGVD 171
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BLAST of mRNA_P-littoralis_Contig613.7.2 vs. uniprot
Match: A0A835YVZ0_9STRA (50S ribosomal protein L24, chloroplastic n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVZ0_9STRA)

HSP 1 Score: 197 bits (502), Expect = 6.090e-58
Identity = 105/145 (72.41%), Postives = 119/145 (82.07%), Query Frame = 1 
Query:   37 MKLNPNKASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVRKGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRKALLERKDRTRSGGKPAAGAADADVNMAGVD 471
            MK+NPN +SSRRKSRKAHF A S  RR++MSA LSK+L  K+NVRS+PVRK DEVMVVRG YKNREGKV  CYRRK+VIHIER+TREKANG TV +GIHPSKV ITK+K+DKDRK LLERK R    G  A  A++ DVNMAGVD
Sbjct:    1 MKVNPNVSSSRRKSRKAHFTAPSHQRRIIMSASLSKELQAKYNVRSVPVRKDDEVMVVRGHYKNREGKVTACYRRKYVIHIERVTREKANGATVQIGIHPSKVVITKLKLDKDRKELLERKQRKSKAGA-AKKASEKDVNMAGVD 144
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BLAST of mRNA_P-littoralis_Contig613.7.2 vs. uniprot
Match: A0A451FLG4_9STRA (50S ribosomal protein L24, chloroplastic n=1 Tax=Eustigmatophyceae sp. Mont 10/10-1w TaxID=2506145 RepID=A0A451FLG4_9STRA)

HSP 1 Score: 183 bits (465), Expect = 1.860e-52
Identity = 99/145 (68.28%), Postives = 113/145 (77.93%), Query Frame = 1 
Query:   37 MKLNPNKASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVRKGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRKALLERKDRTRSGGKPAAGAADADVNMAGVD 471
            MK NPN +SSRRKSRKAHF A S  RRVLMSA LSKDL  K+ VRS+P+RK DEV VVRG +KN +GKV   YR+KFVIHI+RITREKANG TV+VGIHPSKV ITK+KM+K RKA+LERK R     K      +ADVN+AGVD
Sbjct:    1 MKFNPNVSSSRRKSRKAHFSAPSHMRRVLMSAPLSKDLQAKYKVRSMPIRKEDEVTVVRGRHKNSDGKVTQVYRKKFVIHIDRITREKANGATVNVGIHPSKVVITKLKMNKSRKAILERKARKSDADKAKGKFTEADVNLAGVD 145
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BLAST of mRNA_P-littoralis_Contig613.7.2 vs. uniprot
Match: A0A3R5U3L5_9STRA (50S ribosomal protein L24, chloroplastic n=4 Tax=Eustigmatophyceae TaxID=5747 RepID=A0A3R5U3L5_9STRA)

HSP 1 Score: 182 bits (463), Expect = 3.780e-52
Identity = 95/145 (65.52%), Postives = 116/145 (80.00%), Query Frame = 1 
Query:   37 MKLNPNKASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVRKGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRKALLERKDRTRSGGKPAAGAADADVNMAGVD 471
            +K NPN +SSRRKSRK HF A S  RR++MSA LSKDL  K+ VRS+P+RK DEV VVRG++KNR+GKV   YR+KFVIHI+R+TREKANG TV+VGIHPSKV ITK+K++K RKA+LERK RT +  K      +ADVN+AGVD
Sbjct:    2 VKFNPNVSSSRRKSRKQHFTAPSHVRRIIMSAPLSKDLRAKYKVRSIPIRKEDEVTVVRGSFKNRDGKVTQVYRKKFVIHIDRVTREKANGATVNVGIHPSKVIITKLKLNKSRKAILERKARTSAADKNKGKLTEADVNLAGVD 146
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BLAST of mRNA_P-littoralis_Contig613.7.2 vs. uniprot
Match: A0A7S2C9Q4_9STRA (50S ribosomal protein L24, chloroplastic n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C9Q4_9STRA)

HSP 1 Score: 181 bits (459), Expect = 1.290e-51
Identity = 93/145 (64.14%), Postives = 116/145 (80.00%), Query Frame = 1 
Query:   37 MKLNPNKASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVRKGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRKALLERKDRTRSGGKPAAGAADADVNMAGVD 471
            MK +PN +S R KSRKAHF A S  +R +MSA LSKDL  K+NVRS+P+RK DEVMVVRG++KNREGKV   YR+K+VIHIER++R+KANG  V++GIHPS   ITK+K+DKDRK +L+RKDR++   K   G +DADVNMAGVD
Sbjct:    1 MKFSPNVSSDRNKSRKAHFTASSSQKRKIMSASLSKDLVSKYNVRSMPIRKDDEVMVVRGSHKNREGKVIQVYRKKYVIHIERVSRDKANGAPVNIGIHPSNCVITKLKLDKDRKNILDRKDRSKDSSK---GLSDADVNMAGVD 142
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BLAST of mRNA_P-littoralis_Contig613.7.2 vs. uniprot
Match: A0A7J6P5Z0_PEROL (60S ribosomal protein L26 n=7 Tax=Alveolata TaxID=33630 RepID=A0A7J6P5Z0_PEROL)

HSP 1 Score: 181 bits (458), Expect = 1.870e-51
Identity = 95/145 (65.52%), Postives = 117/145 (80.69%), Query Frame = 1 
Query:   37 MKLNPNKASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVRKGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRKALLERKDRTRSGGKPAAGAADADVNMAGVD 471
            MK +P  +SSRRKSRKAHF A S+ RR++MSA LSK+L  K+NVRS+P+RK DEVMVVRG Y +REGKV  CYR+KFVIHIER+TR+K NG+  +VG+HPSKV ITK+KMDKDRKALLERK+R++  GK +    + DV MA VD
Sbjct:    1 MKFSPAVSSSRRKSRKAHFTAPSDQRRIIMSAPLSKELRAKYNVRSVPIRKDDEVMVVRGHYSDREGKVTACYRKKFVIHIERLTRDKVNGSHANVGVHPSKVVITKLKMDKDRKALLERKNRSKDSGKKSY--TEKDVAMAQVD 143
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BLAST of mRNA_P-littoralis_Contig613.7.2 vs. uniprot
Match: T0Q9Y6_SAPDV (50S ribosomal protein L24, chloroplastic n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0Q9Y6_SAPDV)

HSP 1 Score: 180 bits (457), Expect = 2.710e-51
Identity = 95/145 (65.52%), Postives = 111/145 (76.55%), Query Frame = 1 
Query:   37 MKLNPNKASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVRKGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRKALLERKDRTRSGGKPAAGAADADVNMAGVD 471
            MK N    SSRRK RKAHFGAHS  RRVLMSA LSKDL  K+NVRS+P+RK DEV +VRG++KNREG+V  CYR+KFVIH+ER+ +EK NG  V VGIHPSKV ITK+K+DKDRK +LERK+R   G K      +ADV MA VD
Sbjct:    1 MKFNSTVTSSRRKCRKAHFGAHSTQRRVLMSANLSKDLQSKYNVRSMPIRKDDEVTIVRGSFKNREGRVTQCYRKKFVIHVERVVKEKVNGAAVPVGIHPSKVVITKLKLDKDRKKILERKNRA-VGDKNKGKFTEADVAMANVD 144
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BLAST of mRNA_P-littoralis_Contig613.7.2 vs. uniprot
Match: A0A7S2V566_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V566_9STRA)

HSP 1 Score: 179 bits (453), Expect = 1.090e-50
Identity = 92/145 (63.45%), Postives = 110/145 (75.86%), Query Frame = 1 
Query:   37 MKLNPNKASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVRKGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRKALLERKDRTRSGGKPAAGAADADVNMAGVD 471
            MK+    +SSRRKSRKAHF AHS ARRV+MSA LSKDL  K+NVRS+P+RK DEV V RG +KNREGKV  CYR+K+V+H+ER T+EK NG  VHVGI PS V ITK+K+DK+RKA+LERKDR +   K      + DVNM  VD
Sbjct:    1 MKVKNTVSSSRRKSRKAHFSAHSTARRVIMSAPLSKDLQAKYNVRSMPIRKDDEVQVTRGYFKNREGKVVQCYRKKYVVHVERCTKEKTNGAQVHVGIAPSNVVITKLKLDKNRKAILERKDRAKGAEKGKGKYTETDVNMGNVD 145
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BLAST of mRNA_P-littoralis_Contig613.7.2 vs. uniprot
Match: A0A1V9ZGA6_9STRA (50S ribosomal protein L24, chloroplastic n=2 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZGA6_9STRA)

HSP 1 Score: 179 bits (454), Expect = 1.170e-50
Identity = 96/153 (62.75%), Postives = 112/153 (73.20%), Query Frame = 1 
Query:   13 RFICSSTDMKLNPNKASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVRKGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRKALLERKDRTRSGGKPAAGAADADVNMAGVD 471
            R   S    K N    SSRRK RKAHFGAHS  RRVLMSA LSKDL  K+NVRS+P+RK DEV +VRG++KNREG+V  CYR+KFVIH+ER+ +EK NG  V VGIHPSKV ITK+K+DKDRK +LERK+R   G K      +ADV MA VD
Sbjct:    7 RCTLSQASAKFNSTVTSSRRKCRKAHFGAHSTQRRVLMSANLSKDLQAKYNVRSMPIRKDDEVTIVRGSFKNREGRVTQCYRKKFVIHVERVVKEKVNGAAVPVGIHPSKVVITKLKLDKDRKKILERKNRA-IGDKNKGKFTEADVAMANVD 158
[Close]
BLAST of mRNA_P-littoralis_Contig613.7.2 vs. uniprot
Match: A0A7S3LFZ3_9STRA (50S ribosomal protein L24, chloroplastic n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LFZ3_9STRA)

HSP 1 Score: 178 bits (451), Expect = 1.940e-50
Identity = 95/145 (65.52%), Postives = 112/145 (77.24%), Query Frame = 1 
Query:   37 MKLNPNKASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVRKGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHPSKVQITKIKMDKDRKALLERKDRTRSGGKPAAGAADADVNMAGVD 471
            MK NPN +S+RRKSRKAHFG+HS ARR LMSA LSK+L EK+NVRSLP+RK DEV + RG +KNREGKV   YR+KFVIH+ER+ R+KANG     GIHPSKV ITKIK+DKDRKALL+RK++     K      DADV M+ VD
Sbjct:    1 MKFNPNVSSARRKSRKAHFGSHSTARRKLMSAPLSKELQEKYNVRSLPIRKDDEVTIARGTFKNREGKVIQVYRKKFVIHVERVLRDKANGGNFPAGIHPSKVIITKIKLDKDRKALLDRKNKLE---KDKGKFTDADVAMSNVD 142
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig613.7.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8N0_ECTSI3.920e-8794.6750S ribosomal protein L24, chloroplastic n=2 Tax=E... [more]
A0A835YVZ0_9STRA6.090e-5872.4150S ribosomal protein L24, chloroplastic n=1 Tax=T... [more]
A0A451FLG4_9STRA1.860e-5268.2850S ribosomal protein L24, chloroplastic n=1 Tax=E... [more]
A0A3R5U3L5_9STRA3.780e-5265.5250S ribosomal protein L24, chloroplastic n=4 Tax=E... [more]
A0A7S2C9Q4_9STRA1.290e-5164.1450S ribosomal protein L24, chloroplastic n=1 Tax=F... [more]
A0A7J6P5Z0_PEROL1.870e-5165.5260S ribosomal protein L26 n=7 Tax=Alveolata TaxID=... [more]
T0Q9Y6_SAPDV2.710e-5165.5250S ribosomal protein L24, chloroplastic n=4 Tax=S... [more]
A0A7S2V566_9STRA1.090e-5063.45Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1V9ZGA6_9STRA1.170e-5062.7550S ribosomal protein L24, chloroplastic n=2 Tax=A... [more]
A0A7S3LFZ3_9STRA1.940e-5065.5250S ribosomal protein L24, chloroplastic n=1 Tax=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig613contigP-littoralis_Contig613:50442..55142 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G8N0
Preferred nameRPL26
PFAMsKOW,Ribosomal_L26
Model size1498
Max annot lvl2759|Eukaryota
KEGG koko:K02898,ko:K18449,ko:K20068
KEGG Pathwayko03010,map03010
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0000075,GO:0000077,GO:0000184,GO:0000278,GO:0000956,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005840,GO:0005844,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006417,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0006974,GO:0006977,GO:0007049,GO:0007093,GO:0007154,GO:0007165,GO:0007346,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009266,GO:0009314,GO:0009409,GO:0009411,GO:0009416,GO:0009507,GO:0009536,GO:0009605,GO:0009628,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010212,GO:0010332,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010564,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010941,GO:0010942,GO:0010948,GO:0015031,GO:0015833,GO:0015934,GO:0016020,GO:0016070,GO:0016071,GO:0016072,GO:0019222,GO:0019439,GO:0019538,GO:0022402,GO:0022613,GO:0022625,GO:0022626,GO:0023051,GO:0023052,GO:0023056,GO:0030330,GO:0030424,GO:0031090,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031570,GO:0031571,GO:0031667,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032991,GO:0033036,GO:0033267,GO:0033365,GO:0033554,GO:0034248,GO:0034250,GO:0034470,GO:0034613,GO:0034641,GO:0034644,GO:0034645,GO:0034655,GO:0034660,GO:0035556,GO:0042254,GO:0042273,GO:0042594,GO:0042770,GO:0042788,GO:0042886,GO:0042981,GO:0042995,GO:0043005,GO:0043043,GO:0043065,GO:0043067,GO:0043068,GO:0043170,GO:0043195,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043516,GO:0043517,GO:0043603,GO:0043604,GO:0043679,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044306,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0044773,GO:0044774,GO:0044783,GO:0044819,GO:0045047,GO:0045184,GO:0045202,GO:0045727,GO:0045786,GO:0045787,GO:0045930,GO:0046483,GO:0046700,GO:0046907,GO:0048027,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051641,GO:0051649,GO:0051716,GO:0051726,GO:0060255,GO:0065007,GO:0070013,GO:0070727,GO:0070972,GO:0071156,GO:0071158,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071482,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072331,GO:0072395,GO:0072401,GO:0072413,GO:0072422,GO:0072431,GO:0072594,GO:0072599,GO:0072657,GO:0080090,GO:0080134,GO:0080135,GO:0090068,GO:0090150,GO:0090304,GO:0097159,GO:0097458,GO:0098588,GO:0098793,GO:0098805,GO:0104004,GO:0120025,GO:0120038,GO:0150034,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901796,GO:1901798,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902162,GO:1902164,GO:1902165,GO:1902167,GO:1902229,GO:1902231,GO:1902253,GO:1902255,GO:1902400,GO:1902402,GO:1902403,GO:1902531,GO:1902533,GO:1902806,GO:1902807,GO:1903047,GO:1904803,GO:1990904,GO:1990928,GO:2000045,GO:2000112,GO:2000134,GO:2001020,GO:2001022,GO:2001233,GO:2001235,GO:2001242,GO:2001244
Exons4
Evalue1.3e-89
EggNOG OGsCOG0198@1|root,KOG3401@2759|Eukaryota
Ec32 ortholog description60S ribosomal protein L26
Ec32 orthologEc-22_002330.1
Descriptionregulation of translation involved in cellular response to UV
Cds size438
COG categoryJ
BRITEbr01610,ko00000,ko00001,ko00002,ko03011,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig613.7.2prot_P-littoralis_Contig613.7.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig613 51466..55106 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791278.1242676-UTR-P-littoralis_Contig613:50441..514651680791278.1242676-UTR-P-littoralis_Contig613:50441..51465Pylaiella littoralis U1_48UTRP-littoralis_Contig613 50442..51465 -
1680791278.1816602-UTR-P-littoralis_Contig613:55106..551421680791278.1816602-UTR-P-littoralis_Contig613:55106..55142Pylaiella littoralis U1_48UTRP-littoralis_Contig613 55107..55142 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791278.1384442-CDS-P-littoralis_Contig613:51465..516321680791278.1384442-CDS-P-littoralis_Contig613:51465..51632Pylaiella littoralis U1_48CDSP-littoralis_Contig613 51466..51632 -
1680791278.1491854-CDS-P-littoralis_Contig613:52168..523101680791278.1491854-CDS-P-littoralis_Contig613:52168..52310Pylaiella littoralis U1_48CDSP-littoralis_Contig613 52169..52310 -
1680791278.159901-CDS-P-littoralis_Contig613:53843..539711680791278.159901-CDS-P-littoralis_Contig613:53843..53971Pylaiella littoralis U1_48CDSP-littoralis_Contig613 53844..53971 -
1680791278.1719785-CDS-P-littoralis_Contig613:55105..551061680791278.1719785-CDS-P-littoralis_Contig613:55105..55106Pylaiella littoralis U1_48CDSP-littoralis_Contig613 55106..55106 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig613.7.2

>prot_P-littoralis_Contig613.7.2 ID=prot_P-littoralis_Contig613.7.2|Name=mRNA_P-littoralis_Contig613.7.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=146bp
MKLNPNKASSRRKSRKAHFGAHSEARRVLMSAGLSKDLFEKHNVRSLPVR
KGDEVMVVRGAYKNREGKVETCYRRKFVIHIERITREKANGNTVHVGIHP
SKVQITKIKMDKDRKALLERKDRTRSGGKPAAGAADADVNMAGVD*
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mRNA from alignment at P-littoralis_Contig613:50442..55142-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig613.7.2 ID=mRNA_P-littoralis_Contig613.7.2|Name=mRNA_P-littoralis_Contig613.7.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=4701bp|location=Sequence derived from alignment at P-littoralis_Contig613:50442..55142- (Pylaiella littoralis U1_48)
GGACGTCGGTGGAGGTTCATCTGCTCGTCTACAGACAGTGAGTGCCCTTG
CGAAGAGATGATGCGGACGTTTCTTCTGCCGTTGTTTGGGCGAGAACGTT
GGACACGGCCGTAGTGGTTCTCGCGAGAAGAGAAGCCACAGACACATCTT
TCGGATTGATTCACCAGTTGCCACTCATTTCGAGCCTTGGCAACCGTGAG
ACACCGAGTCTGAGCGAGCTTCGATGTGAGAGACACGTTGTTGTAGGCTG
GTATGGGTCAGTATTACCCGGCATAATTGCTTGGTGCTGCACGTATGTTG
AAAGCCTCCGAGTACGGTACAAAAGGTAGCAGCTGCAGCGGGTGGGGGCT
GTGCCTCTGTCTCGCAGTCTCGTAGAGGCCTTGTCCGACTTGCGGCAAGC
ACCTCTCGTTCCTTATTGTTTTTTGGGTCTACTGCTGTAGGCCGTGACTG
CTGAACGTCGCGCTCTCTGCGCGTATTGTGTGGTTCATTGCCTGATGAGA
CGCCGGCACAGTTGTCTCTCGCTGTGCACCCACGAGAAAATTGAAAATTG
CCCTGGCTCGAAAGCAGCGCGCCAGCAAATCCCACGCACCGGATTTTTCC
CTGATTCTGGGCGTATGATAACGTGCAGTTGGTTTTCATGGGTGACCGCA
CGCCGAGTTCTTGCACCTTTCTCGTTCTGTGAGCACTTGTGTTTTAACCT
GTACTGCACCGGAGCAAACTTGAACGTCGTGTTTTCATGTCAAACAAAAC
TAGCCCTCGTACACATGACGCTGCGTGCACCGTAAATAGTGTCAGAATCC
AAAGTACACCCGACTGTCAGGAAGCTTGACATGTGAAGCTCGATATCAAA
ATAAGTGTTTCTGTTCTTTGGGACATGTGATTTCTTTCGCCGGTACGGCG
GACAGCAGCAGTGTTGCACGAGCTACTGTTTGTAGCGTGTGATTCTGAAT
CCTAACACCGATACAAGTATATACCCACCCACCTGGTTATTTTACATCGT
GCGAAACCCAGCAAACTGCACTTTGCTCCTAATACTGCAGTGCAACACTG
GTGGGCGTGTGTTGTCACCTCGGCTGAAGTGCTCTTGGCTCGCTGCACCT
CTATAATCCTCCTTGCACATCTCAACCCTTGCTCACACCATGTCCGTCCT
TTCCATTTCCTTGGAGCGCAGTGAAGCTCAATCCCAATAAGGCGTCCTCC
CGGCGTAAGAGCCGCAAGGCGCACTTCGGTGCGCACTCTGAGGCCCGCCG
GGTGCTCATGTCCGCGGGCCTGAGCAAGGACCTCTTCGAAAAGCACAACG
TGAGCTGCTTAGGGATGGCTGACCCTTTTGTTTCGCGAACGTCTAGGGAG
TTGTACAGCACTAAGATCTGAGTTTGTCCCTTCATACGGCATCATGTGTA
GACTGTACGAGAGGTATGTGCTGCTTTACAAACAGGATATAACTTCTGTA
ATCGGTTAGACAGGTACACTCATCTCTGAGTTTGTCTGTCATGGTTTCTC
TCGGGGCTGTATCAACTGTTTCTCCAGGCGTCTCTCTTGTGTTGCTCATA
CATGCTTGTAGAAATGGAGTACCAGCCTGTGAAGCACGTCGTATTTGTTT
CGCGCGGGTTTCGATTGTTTTGGGGGTCAAGCGGAGGGCTGGCGACCTGT
GATGAGCATACTTTATAAAGACTTTGATGCTGACCATTGACCTTGATGAG
CTAAACACAAGACTACGATGGACTGAGGCCCCCGCCAACCGAATAATTAC
CATCATACGGTGCTACCCCAGCCACCGGAGTGAGTTGGTTTTCGAGTTTC
GTACGAACTTTTCGTTTGATATGGTGTGGTGACCTGTGATGAGCAAACTT
TATAAAGACTTTGATGCTGATCTTGACCTTGATGAGCAAATACAAGACTA
CGATGGACTGAGGCACCGCGCTTTTTTGGTATTCCGTTTGTACCTTCGTT
CTACAGCAGTACGTACAATTTTGGCCACGATATCCGCTTGATGTGGCTCG
GTGACCTGTGATGAGCAAACTTTATAAAGACTTTGATGCTGATCTTGACC
CTGATGAGCAAGTACCAAGACTACGATGGACTGAGGCACCGCTCTGTTGT
ATGTATCCCTCTAGTACCTTCGTTATTGAGTCCAATTTCGACAACGACAC
GTCTGATCGGGATAGATGAATTTCCAGTCAGTGTGATGATGCAGACCACT
GACAACATTTTGCGTTTGGTCCCGACTGACATGAGTGAATTCCAGACGTT
GATGGCCTTGGGCACTACAGTACCGGTACATTTTTGTTTTTTTATTTCAA
AATCATTTCAAAGAAATTTTGAACATCCGCTTTTGCAGCGAGTGAGAAAA
ACACATGATATGATTGTGCGAAACTAGCCCCATGATTATATCAGCAATCA
TACCAAGATCTGTTCCGAACAAACGATGTCGAACAATCGCAAATTCAGTC
TTCAATATGACGGGATTTTTCGCACCCGAATATCAATCGCTCTTTGACAG
TCCAGCACATTTTAACACTTCTATAGCACCATGTTGAATGATGGGAGTCT
AGTGACGTGACAGGACCATACGGTGACCAATGATGACGAAACTTTCAAAA
GACTTTGATGCTGATCTTGACTTTGATAAGCAAAAACAAGACTACGATAG
ACTAAAGCACCGCTTGCTTGTTATGATGGTTGCTGCTTTTGTCAAAATAT
ACTCTGGGGTGTGATACGCAGTATTGACTCCAGATCATACTTGCCGCAAA
CACGTTGTACGCTAGGCATCCTGCGGCGCTTCTTCCGCTGTTGTGAACGT
GTTGCCGCCTCTGATATTTTCCATTCTGCCAGGTCCGATCGCTCCCCGTA
CGAAAGGGTGACGAGGTGATGGTCGTCAGAGGAGCCTACAAGAACCGCGA
GGGCAAGGTGGAGACCTGCTACCGCCGCAAGTTCGTCATCCACATCGAGC
GCATCACCAGGGAGAAGGCCAACGGTAAGAGGGAATGCCGCTGTGCCCCG
CATGTGTGTCGTCGACGTGCATGCCCCAGCCTGTTCTGTTGAAAAAGGGC
GTACGGGCACGATTCGAACGTGTTTGGTGGCGTGGTGAGGCAGGCTCGGA
GAAGGAGGGGCCTAGTCGGTTCGCCCAAGGTCGAGTTGCCTCCTAGCAAA
TCATGACGGGTTGCACGTTATTACGTTGTTGCCTCCGTCGGCTGCTGAAC
CCAGTAGACATTCTCGTTGGTCCACCAACGGCGAGCTGATTGCGTGGCGT
ATTGCCTTTATGACTGTTCGAGTAGTGTTCCACTGTATACCAGCATCTGG
CCAGGAGCCGTGTGTCCTTCTGTCACAGGCTTGTGTGCCTGGATAGTGAT
GAAGAGTTGTTGTTGAGACAACCCAGAAAGGTCGTAGACGCTCCCCCGAG
ACCTGTGTTTGGGGGTGACAGCGGTACCTCATGTCTCCTTGCCTCGTGGG
AAGTCTTCTTGCACGTCGTACAAATCCCCTTTATCGTGCCGCCGTTGGTT
TCACCCACAGGCAACACAGTCCACGTGGGCATCCACCCTTCCAAGGTCCA
GATCACAAAGATCAAGATGGATAAGGACCGCAAGGCGCTGCTGGAGCGCA
AGGACCGCACTCGCAGCGGCGGCAAGCCCGCAGCCGGCGCCGCCGACGCG
GACGTCAACATGGCGGGCGTAGACTAGAGTTGATTGAACCGAACTGATGG
CTTAGCGGGTGGATGAGAAACGGGTGGTCTTTCTTTTTGGTCAGCACACT
CTCGTACTTTTGCGGATTGTCTCGCTTGTGGATGAAAACTACAAAATCAA
ATCGTACTTGTGAACCGCTTGGAGATCACCGTGTCCCTTTTGCATAGCAC
TGCTGTGGGGCATTGTCTTCGGTTGGCCCCCTTCCCAGATGTGATCTGTC
TCGGCAGGAATAAAAACCAAAAGGGATTCGGGATTTTGTTGCCGAACAAA
CAACCCGTATTATTTGCCTGAGGCAAGCTTGTTTGCCTCAGATGGCTGCA
TCTACCGCCCGTAGTGAGCGGCGAACAGCGCAGTGTGCACAGCGGAAGTA
TTTGCATTCGTCATGGGTCGTCCGCTGTCTGCCATACCTGGGCTCTCGTG
TCCTCTACAAGAATCCAACCAGACACCCCCCCCTACCCGCAAACATCCCT
GTGGCACACATCATTCGACAGCACCAACCACAACTCGACCCTTAGGATAC
AGATGCGGATCAAATTTGAATGAGCGTGTGCTCTTATGTGCACAAGTTGG
TCACAGGAAGTTTGGTGGCATTGGGTTCGGGCCGTGGCGAGATTTTGGCT
CAAGAGTGTGTTAAAATTAGACAAACAGATGAAACGAAATAACAGACTAT
GCTTCCGTAAAATATCACGCTGATATGAGTTTTTGTTTTACGGAGTTTCC
TACTCCATCCCACCCCGCCGCCGAAACCTCATCACAAACAAACCCACCAA
ATTTCCCTTGACCAACCTGAAAGCACTGAATCGTACCCTCGAACAGTCTT
CGTCTCGATTGGTGTCGGGTGGGGTTTTGCACGGTGCTGTTTCCCATTGC
CCATTGTGCTCAAAGTAGAGTCTTCAACCGTTTGGGCGGGGAGTGCCTTA
AGAGGAAATACACAGGACCCGACAACAGAGGTTACCGCCAAGTCTGTGCG
GACGGTCTCCAGTGGTAACATCACCAAAAGGCAACACAACACTCCCTTGT
G
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Coding sequence (CDS) from alignment at P-littoralis_Contig613:50442..55142-

>mRNA_P-littoralis_Contig613.7.2 ID=mRNA_P-littoralis_Contig613.7.2|Name=mRNA_P-littoralis_Contig613.7.2|organism=Pylaiella littoralis U1_48|type=CDS|length=438bp|location=Sequence derived from alignment at P-littoralis_Contig613:50442..55142- (Pylaiella littoralis U1_48)
ATGAAGCTCAATCCCAATAAGGCGTCCTCCCGGCGTAAGAGCCGCAAGGC
GCACTTCGGTGCGCACTCTGAGGCCCGCCGGGTGCTCATGTCCGCGGGCC
TGAGCAAGGACCTCTTCGAAAAGCACAACGTCCGATCGCTCCCCGTACGA
AAGGGTGACGAGGTGATGGTCGTCAGAGGAGCCTACAAGAACCGCGAGGG
CAAGGTGGAGACCTGCTACCGCCGCAAGTTCGTCATCCACATCGAGCGCA
TCACCAGGGAGAAGGCCAACGGCAACACAGTCCACGTGGGCATCCACCCT
TCCAAGGTCCAGATCACAAAGATCAAGATGGATAAGGACCGCAAGGCGCT
GCTGGAGCGCAAGGACCGCACTCGCAGCGGCGGCAAGCCCGCAGCCGGCG
CCGCCGACGCGGACGTCAACATGGCGGGCGTAGACTAG
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