mRNA_P-littoralis_Contig116.53.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig116.53.1
Unique NamemRNA_P-littoralis_Contig116.53.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig116.53.1 vs. uniprot
Match: A0A6H5KME1_9PHAE (DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KME1_9PHAE)

HSP 1 Score: 1329 bits (3439), Expect = 0.000e+0
Identity = 773/1199 (64.47%), Postives = 876/1199 (73.06%), Query Frame = 3
Query:   45 MISAAPRSTGQATLITGFLGSGKTWSLTNQLLQAARSSESSPRHEEASSGSGSLLALSTRQADCAALRQRIDLDRPLGCTKCDAVTFPSLVRTIVNDFGPTIGSY-PSVDARVLDRSALSVFLHRNLDALPLGKYRPLHDPGNAVRPLLDLFSSLAHCGVSPEEYLGYVETLETELLEIPAAGRE---GLVVNDKAAAVSSEPTAXXXXXXXXXXXXXXXXXXLEAEGWRAHLAGERDKANSYEAFVALKRREGVADYSDHLLLARRVLKESPSAKAALSLRLSHIYVDDLQEYSPAMVGVLADLVAPGVGITAAIDPFLAATSSNFPAGHVLGAEHSAMARFKAAFPDAMEMPLVGNRHSTDAIQVAMEALKPRDTPVGAKDKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAVEVRGSRLTCLTFQTEEDEVSALGRRVRRLIDGGVSPGDIGVAAVGGWGVADSLVAAVSAVGVPVEGPTRFSSVFDSETPRMLMSFLRCLVHPSESTPLLHLLMTCPAYALPAGELTSALEGHLSRYVPLRSFLQTSHLGEGQDTDPRGGENGVSANARSTAGRLLSDVNRFAESAKRKGVREIMRDFLRYTGQLERLEEPTTTEEEKQGRSVAELFELAVKAEKQAGGDNVALVEPVLRLYRRHGTGYMDSSRFAHDETTTDNGKSETRGGPSSCGGGAVRIFQPGKDWEGGDHRFFDTVFIPFCTRGRLPGNLRTARLPVPGPFYGAPEPRDSASLRSQADLARAGHENRARAMLYVALGYARREVCLSVSASVRRGKTHLNPSPFLREILEEDAPLEWKATIASSEKEGQEEPDRLDGVADGGR----GDLDVVPKHSVNGEGGGGVTDVRLFVPPXXXXXAPLRLSFSSISSFAACPHSYYLQHVLNVSPPPNPRMVYGRAMHESVAAVLRYVVNGXXXXXXXXXXXXXXTLEAVVEEFNLHFGGCAFESAVQVRTLRAAGVAGLEAFMSRLIEG-GCVVGGHGRGDGAAGSSGDAQLLVERKFMVKVPEANVILSGIFDRVDIDLPSASAGVGGGASRPALLSITDYKSNVGEKDPKRMVRDNLQLRVYALAAEKLFGFFPTELAIESIEDGRRGAVVPSPADADIAMEAISKTAAAVRAESFDATPSFQACTFCGFKHMCQHSVITSAAL 3614
            MISAAPRSTGQATLITG LGSG                            +GSLLA+S  QADCA L+QRIDL++PLGCTKCD VTFPSLVR IV++FGPT+GSY  S DA VL+R++LSVFLHRNLDALPLGKYRPLHDPG+AVRPL+ LFSSLAHCGVSPE+YL YVE LETE+    A G E   G+ V+D A + +    A                  LEAEGWRAH+AGERDKA++YEAFV LKRREGVADYSD LLLARR+L+ES +AKAALSLRLSH+YVDDLQ YSPAM+ +LA LVAPG  ITA  DP LAA SS      V GAEH+A+ARFK AFP A E+ L GN  S+  IQVAM+AL+PRD PV AK K                         XXXXXXXXXXXX                         R SRLTCLTFQTE DEV ALGRRVR +I  GV PGDIGVAAVGG GVAD+LVAA+SA GVPVE P RFS+VFD+ETPRMLMSFLRCLVHPSESTPLLHLLM+CPAYALP GELT+ALEGHLSRYVPLRSFL+ S+LGEG D+ PR   +GVS +AR+ AG+LLSDV+RFAE+AKR GVRE+M +FLRY+GQLERLEEPTT EEE++GR+V E FEL  +AE+QAGGD V LVEP+LRL+RRHGTGYM  S   HD+     G+    GG S+   GAVR+F+PG+DW+ G++R F TVFIPFC+R RLPGNLRTARL VPGPF G PEPRD+ SLR++ADLARAGHENR RA LY ALG A REVCLSVSA   RGKTHL+PSPFL EIL +DAP EWK  I +     +++ DRL  +AD G     G  D  P      EGG      RL         A LRLSFSSISSFAACPHSY+LQHVLNVSPPPNPRMVYGRAMHE VAA+LR V +G              TLEAVV++FN H GGCAFESA Q+RTLRAAGVAGLE+FMSRLIEG GC       G G+  +S   QLLVERKFMVK+PEA+V+LSGIFDRVDI+     A VGGG+S P LLSITDYKSNVG K P RMVR+NLQLR+YALAAE+LF   PTE+AIESIEDGRRG  VP  ADA+IA+E IS TA AVRAE FDATPSFQACTFCGFKHMC+HS++ SAAL
Sbjct:    1 MISAAPRSTGQATLITGLLGSGS---------------------------AGSLLAVSP-QADCARLQQRIDLEQPLGCTKCDVVTFPSLVRRIVHEFGPTVGSYYTSADAPVLNRNSLSVFLHRNLDALPLGKYRPLHDPGDAVRPLISLFSSLAHCGVSPEDYLRYVEALETEI----AGGGEQQGGVAVDDDAGSGTPARRARQRAQ-------------LEAEGWRAHVAGERDKADAYEAFVDLKRREGVADYSDQLLLARRILRESATAKAALSLRLSHVYVDDLQWYSPAMIDILASLVAPGARITATADPHLAAMSSV----GVFGAEHTAIARFKKAFPGAQELYLAGNHQSSSTIQVAMKALEPRDAPVVAKRKNTAKAAKADAPGVADFLEDTTTVERXXXXXXXXXXXXTDERPALAT----------TPGAASRDSRLTCLTFQTEGDEVKALGRRVREVIKAGVYPGDIGVAAVGGGGVADTLVAALSAAGVPVEAPPRFSAVFDNETPRMLMSFLRCLVHPSESTPLLHLLMSCPAYALPGGELTAALEGHLSRYVPLRSFLRDSYLGEGGDSYPREEGHGVSTSARTVAGKLLSDVDRFAETAKRTGVREVMLEFLRYSGQLERLEEPTTKEEEQEGRAVVEFFELTARAEQQAGGDRVTLVEPILRLFRRHGTGYMKPSG-PHDDEAATGGEF---GGSSAEYSGAVRVFRPGEDWKAGENRSFHTVFIPFCSRARLPGNLRTARLTVPGPFRGYPEPRDTESLRAEADLARAGHENRGRATLYAALGSAGREVCLSVSARATRGKTHLSPSPFLAEILGDDAPREWKTAIEAP----KDQEDRLHFLADEGAAAPGGSRDAAPNVV---EGGYATAAGRLESASPSPAAAALRLSFSSISSFAACPHSYFLQHVLNVSPPPNPRMVYGRAMHEGVAALLRGVASGSRGAGPPP------TLEAVVQDFNRHLGGCAFESADQLRTLRAAGVAGLESFMSRLIEGRGCAA-----GAGSGHNSQQRQLLVERKFMVKIPEASVVLSGIFDRVDIE-----AAVGGGSSHPGLLSITDYKSNVGAKVPSRMVRNNLQLRIYALAAERLFETPPTEIAIESIEDGRRGVAVPLAADAEIALETISATATAVRAERFDATPSFQACTFCGFKHMCRHSIVASAAL 1113          
BLAST of mRNA_P-littoralis_Contig116.53.1 vs. uniprot
Match: D7FWN6_ECTSI (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWN6_ECTSI)

HSP 1 Score: 1220 bits (3157), Expect = 0.000e+0
Identity = 694/1105 (62.81%), Postives = 790/1105 (71.49%), Query Frame = 3
Query:  324 IVNDFGPTIGSYPSV-DARVLDRSALSVFLHRNLDALPLGKYRPLHDPGNAVRPLLDLFSSLAHCGVSPEEYLGYVETLETELLEIPAAGRE--GLVVNDKAAAVSSEPTAXXXXXXXXXXXXXXXXXXLEAEGWRAHLAGERDKANSYEAFVALKRREGVADYSDHLLLARRVLKESPSAKAALSLRLSHIYVDDLQEYSPAMVGVLADLVAPGVGITAAIDPFLAATSSNFPAGHVLGAEHSAMARFKAAFPDAMEMPLVGNRHSTDAIQVAMEALKPRDTPVGAKDKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAVEVRGSRLTCLTFQTEEDEVSALGRRVRRLIDGGVSPGDIGVAAVGGWGVADSLVAAVSAVGVPVEGPTRFSSVFDSETPRMLMSFLRCLVHPSESTPLLHLLMTCPAYALPAGELTSALEGHLSRYVPLRSFLQTSHLGEGQDTDPRGGENGVSANARSTAGRLLSDVNRFAESAKRKGVREIMRDFLRYTGQLERLEEPTTTEEEKQGRSVAELFELAVKAEKQAGGDNVALVEPVLRLYRRHGTGYMDSSRFAHDETTTDNGKSETRGGPSSCGGGAVRIFQPGKDWEGGDHRFFDTVFIPFCTRGRLPGNLRTARLPVPGPFYGAPEPRDSASLRSQADLARAGHENRARAMLYVALGYARREVCLSVSASVRRGKTHLNPSPFLREILEEDAPLEWKATIASSEKEGQEEPDRLDGVADGGR----GDLDVVPKHSVNGEGGGGVTDVRLFVPPXXXXXAPLRLSFSSISSFAACPHSYYLQHVLNVSPPPNPRMVYGRAMHESVAAVLRYVVNGXXXXXXXXXXXXXXTLEAVVEEFNLHFGGCAFESAVQVRTLRAAGVAGLEAFMSRLIEG-GCVVGGHGRGDGAAGSSGDAQLLVERKFMVKVPEANVILSGIFDRVDIDLPSASAGVGGGASRPALLSITDYKSNVGEKDPKRMVRDNLQLRVYALAAEKLFGFFPTELAIESIEDGRRGAVVPSPADADIAMEAISKTAAAVRAESFDATPSFQACTFCGFKHMCQHSVITSAAL 3614
            IV++FGPT+GS+ +  DA VL+R++LSVFLHRNL ALPLGKYRPLHDPG AVRPLL LFSSLAHCGVSPE+YL YVE LETEL      G +  G+ V+D A + +    A                  LEAEGWRAH+AGERDKAN YEAFV LKRREGV D+SD LLLARR+L+ES +AKAALSLRLSH+YVDD+Q YSPAM+ +LA LVAPG  ITA  DP LAA S       +  AEH+A+ARFK AFP A E+ L GN HS+ AIQ+AM+ L+PRD P  AK K                                                              R SRLTCLTFQTE DEV ALGRRVR +I  GV PGDIGVAAVGG GVAD+LVAA+SA GVPVE P RFS+VFD+ETPRMLMSFLRCLVHPSESTPLLHLLM+CPAYALP GELT+ALEGHLSRYVPLRSFL+  H GEG D+ PRGG +GVS +AR+ AG+LLSDV+RFAE+AKR GVREIM DFLRY+G+LERLEEPTT EEE++GR+VAE FEL  +AE+QAGGDNVALVEP+LRL+RRHGTGYM  S    DE  T        GG S+   G VR+F+ G+DW  G++R + TVFIPFC+R RLPGNLRT RL VPGPF G PEPRD+ SLR++ADLARA HENR RAMLY ALG A +EVCLSVSA   RGKTHL+PSPFL EIL +DAP EW   I +     +++ DRL  V D G     G  D  PK     EGG      RL         A LRLSFSSISSFAACP+SY+LQHVLNVSPPPNPRMVYG+AMHE VAA+LR V +G              TLEAVVE+FN H  GCAFES  Q+RTLRAAGVAGLE+FMSRLIE  GC       G G+  +S   QLLVERKFMVK+PEA+V+LSGIFDRVDI+     A VG G+S P LLSITDYKSNVG K P RMVRDNLQLR+YALAAE+LFG  PTE+AIESIEDGRRG  VP  ADA +A+EAIS TA AVRAE F+ATPSFQACTFC FKHMC+HSV+ SAAL
Sbjct:   27 IVDEFGPTVGSFDTAADAAVLNRNSLSVFLHRNLGALPLGKYRPLHDPGGAVRPLLGLFSSLAHCGVSPEDYLRYVEALETELGTTAGGGEQQGGVTVDDDAGSGAQARRARQRAQ-------------LEAEGWRAHVAGERDKANVYEAFVDLKRREGVEDFSDQLLLARRILRESATAKAALSLRLSHVYVDDIQWYSPAMIDILASLVAPGARITATADPHLAAMSRV----GIFRAEHTAIARFKKAFPGAQELHLEGNHHSSSAIQMAMKTLEPRDAPAAAKRKNSAKAAKADAPGVADFLEDTAGVERNTSAAAAAATDEKPALAT-------------TPGAASRDSRLTCLTFQTEGDEVKALGRRVREVIKAGVHPGDIGVAAVGGGGVADTLVAALSAAGVPVESPPRFSAVFDNETPRMLMSFLRCLVHPSESTPLLHLLMSCPAYALPGGELTAALEGHLSRYVPLRSFLRDIHSGEGGDSHPRGGGHGVSTSARNVAGKLLSDVDRFAETAKRTGVREIMLDFLRYSGRLERLEEPTTKEEEEEGRAVAEFFELTARAEQQAGGDNVALVEPILRLFRRHGTGYMKPSGPRDDEAATGG----EFGGSSAGSSGVVRVFRLGEDWNAGENRSYHTVFIPFCSRARLPGNLRTPRLTVPGPFRGYPEPRDTGSLRAEADLARAYHENRGRAMLYAALGSAGQEVCLSVSARAIRGKTHLSPSPFLAEILGDDAPREWITAIETP----KDQEDRLHLVEDEGAAAPGGSRDAAPKVV---EGGYATVAGRLESASPSPAAAALRLSFSSISSFAACPYSYFLQHVLNVSPPPNPRMVYGQAMHEGVAALLRGVASGSRGAGPPP------TLEAVVEDFNQHLRGCAFESVDQLRTLRAAGVAGLESFMSRLIEDRGCTT-----GAGSGHNSQPRQLLVERKFMVKIPEASVVLSGIFDRVDIE-----AAVGEGSSHPGLLSITDYKSNVGAKVPSRMVRDNLQLRIYALAAERLFGTPPTEIAIESIEDGRRGVAVPLAADAKVALEAISATATAVRAERFEATPSFQACTFCSFKHMCRHSVVASAAL 1074          
BLAST of mRNA_P-littoralis_Contig116.53.1 vs. uniprot
Match: A0A067CEC3_SAPPC (UvrD-like helicase C-terminal domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CEC3_SAPPC)

HSP 1 Score: 120 bits (302), Expect = 8.620e-24
Identity = 94/291 (32.30%), Postives = 137/291 (47.08%), Query Frame = 3
Query: 2742 APL---RLSFSSISSFAACPHSYYLQHVLNVSPPPNPRMVYGRAMHESVAAVLRYVVNGXXXXXXXXXXXXXXTLEAVVEEFNLHFGGCAFESAVQVRTLRAAGVAGLEAFMSRLIEGGCVVGGHGRGDGAAGSSGDAQLLVERKFMVKVPEANVILSGIFDRVDIDLPSASAGVGGGASRPALLSITDYKSNVGE--KDPKRMVRDNLQLRVYALAAEKLFGFFPTELAIESIED--GRR--GAVVPSPADADIAMEAISKTAAAVRAESFDATPSFQACTFCGFKHMCQ 3587
            APL    LSFS I  +  CPH YYL  VL + P  N  MVYGR++HE++A       +                L A  + +    G C   S  + R L+A G A L +F++   +    +                   +E++F   VPEANV+  G++DRV+                   + I ++KSN+ +  +D +R+  ++LQL++Y LA  +L G  P    + S+E   GR   G V  S    D A+ AI  TA A+RA SFDATPSF  C FC F+ +C+
Sbjct:  679 APLPLHHLSFSQIDEYMRCPHRYYLSRVLGLEPKANSSMVYGRSLHEAIATYASVAPHASASED---------ALAAFAKAWTP--GSC--RSLAEERMLQAQGAAALRSFIAYEADRTSYI-----------------ECIEQEFEFHVPEANVLFRGVWDRVERRAEDD-------------VFIVEFKSNLADAARDNQRLADESLQLKLYMLAYHRLTGTPPKGAVLRSLETSHGRNAPGVVAHSVETDDAALSAIQVTARAIRARSFDATPSFLGCAFCAFRDICE 926          
BLAST of mRNA_P-littoralis_Contig116.53.1 vs. uniprot
Match: A0A1V9ZJZ9_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJZ9_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.040e-22
Identity = 94/284 (33.10%), Postives = 133/284 (46.83%), Query Frame = 3
Query: 2754 LSFSSISSFAACPHSYYLQHVLNVSPPPNPRMVYGRAMHESVAAVLRYVVNGXXXXXXXXXXXXXXTLEAVVEEFNLHFGGCAFESAVQVRTLRAAGVAGLEAFMSRLIEGGCVVGGHGRGDGAAGSSGDAQLLVERKFMVKVPEANVILSGIFDRVDIDLPSASAGVGGGASRPALLSITDYKSNVGE--KDPKRMVRDNLQLRVYALAAEKLFGFFPTELAIESIEDGRR----GAVVPSPADADIAMEAISKTAAAVRAESFDATPSFQACTFCGFKHMCQ 3587
            LSF+ I  +  CPH Y L  VL + P  N  MVYGRA+HE++AA  +                   T            G C   SA +   LRA     L +F+                + A G++ D Q  VE  F + VPEA+V+L G++DRV+     A+  V           I ++K+NV    +D + +  ++LQL++Y LA  +L G  P    + S+E        G V  S A   +A+EAI  TAAA+RA SF+ATPSF  C+FC F  +C 
Sbjct:  704 LSFTQIDEYLRCPHRYELSRVLRLEPKANASMVYGRALHEAIAAWTQRASETEAAEDARAALERAWTP-----------GSC--RSAAEETALRAQAQDALASFIEY--------------EAAHGTAADVQS-VEEAFELTVPEADVLLRGVWDRVE---RRANGDV----------FIVEFKANVANTPRDNQALAEESLQLKLYMLAYHRLTGSAPRGAVLRSLESVHGQCAPGIVEHSAASDAVALEAIVATAAAIRARSFEATPSFLGCSFCAFGEVCS 946          
BLAST of mRNA_P-littoralis_Contig116.53.1 vs. uniprot
Match: A0A1Q7HMG1_9CHLR (DNA helicase n=1 Tax=Chloroflexi bacterium 13_1_40CM_4_68_4 TaxID=1805077 RepID=A0A1Q7HMG1_9CHLR)

HSP 1 Score: 116 bits (291), Expect = 1.830e-22
Identity = 106/371 (28.57%), Postives = 158/371 (42.59%), Query Frame = 3
Query:   54 AAPRSTGQATLITGFLGSGKTWSLTNQLLQAARSSESSPRHEEASSGSGSLLALSTRQADCAALRQRIDLDRPLGCTKCDAVTFPSLVRTIVNDFGPTIGSYPSVDARVLDRSALSVFLHRNLDALPLGKYRPLHDPGNAVRPLLDLFSSLAHCGVSPEEYLGYVETLETELLEIPAAGREGLVVNDKAAAVSSEPTAXXXXXXXXXXXXXXXXXXLEAEGWRAHLAGERDKANSYEAFVALKRREGVADYSDHLLLARRVLKESPSAKAALSLRLSHIYVDDLQEYSPAMVGVLADLVAPGVGITAAIDP------FLAATSSNFPAGHVLGAEHSAMARFKAAFPDAMEMPLVGNRHSTDAIQVAMEAL 1148
            A     G   ++ G  G+GKT  LT +++    +  + P HE        +LA++  +   A +++R+DL  P+G       TF      +  +F   +G   S + RVL  +   +FL  ++  LPL KYRP+ DP   VR LLDLF       VS E+Y  Y   L T + E    G +  V  D+AA                                      + + A  Y+A+ ALK +EGV D+ D + L  R+L+E P+A   L  R  ++ VD+ Q+ + A   +L  LV P   IT   D       +  AT  NF A             F+ A+PD   + L+ NR S+  I  A  AL
Sbjct:   28 AVEHGAGPLLVVAG-AGTGKTHVLTARIVHLIAAGAAKP-HE--------ILAVTFTEKAAAQMQERVDLSTPIGLNDAGIKTFHGFGDEVFREFALELGR--SGELRVLSAAEQVIFLREHIYELPLRKYRPVGDPLRYVRALLDLFGRARDEDVSGEDYTAYAAKLRTAVGE----GIDADVRADEAAT-------------------------------------QEELAAVYQAYGALKEKEGVIDFGDQIALCLRLLREHPAAARRLQSRFRYVLVDEFQDTNAAQFRLLRALVEPHKNITVVGDDDQSIFAWRGATLGNFAA-------------FRDAYPDHTVVTLLENRRSSQGILDAAHAL 332          
BLAST of mRNA_P-littoralis_Contig116.53.1 vs. uniprot
Match: A0A535DU18_9CHLR (DNA helicase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535DU18_9CHLR)

HSP 1 Score: 116 bits (290), Expect = 3.140e-22
Identity = 102/364 (28.02%), Postives = 158/364 (43.41%), Query Frame = 3
Query:   54 AAPRSTGQATLITGFLGSGKTWSLTNQLLQAARSSESSPRHEEASSGSGSLLALSTRQADCAALRQRIDLDRPLGCTKCDAVTFPSLVRTIVNDFGPTIGSYPSVDARVLDRSALSVFLHRNLDALPLGKYRPLHDPGNAVRPLLDLFSSLAHCGVSPEEYLGYVETLETELLEIPAAGREGLVVNDKAAAVSSEPTAXXXXXXXXXXXXXXXXXXLEAEGWRAHLAGERDKANSYEAFVALKRREGVADYSDHLLLARRVLKESPSAKAALSLRLSHIYVDDLQEYSPAMVGVLADLVAPGVGITAAIDP------FLAATSSNFPAGHVLGAEHSAMARFKAAFPDAMEMPLVGNRHSTDAI 1127
            A    TG   ++ G  G+GKT  LT +++    +  + P HE        +LA++  +   A +++R+DL+ PLG       TF      +  +F   +G   S + RVL  +   +F+  +L  LPL +YRP  DP   VR LLDLF       VSPE+Y  + + L   +      G +  V  D A A                                     + + A+ Y+A+ ALK +EGV D+ D + L  R+L++ P+A   L  R  ++ VD+ Q+ + A   +L  LV P   ITA  D       +  AT  NF A             F++ +PDA  + LV NR S+  +
Sbjct:  381 AVEHGTGPLLIVAG-AGTGKTHVLTARVVHLIAAGAAKP-HE--------ILAVTFTEKAAAGMQERVDLNTPLGLNDAAIKTFHGFGDEVFREFALELGR--SGELRVLSSAEQVIFVREHLFDLPLRRYRPAGDPLEYVRALLDLFGRARDEDVSPEQYAAHAKNLRDAV----GVGIDADVRADDADA-------------------------------------QEELASVYQAYTALKEKEGVIDFGDQIALCLRLLRDHPAAARRLQNRYRYVLVDEFQDTNDAQFKLLRLLVEPHRNITAVGDDDQSIFAWRGATLGNFDA-------------FRSTYPDATVVTLVQNRRSSQGL 678          
BLAST of mRNA_P-littoralis_Contig116.53.1 vs. uniprot
Match: A0A536HPY1_9CHLR (DNA helicase n=3 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A536HPY1_9CHLR)

HSP 1 Score: 114 bits (285), Expect = 9.510e-22
Identity = 102/364 (28.02%), Postives = 157/364 (43.13%), Query Frame = 3
Query:   54 AAPRSTGQATLITGFLGSGKTWSLTNQLLQAARSSESSPRHEEASSGSGSLLALSTRQADCAALRQRIDLDRPLGCTKCDAVTFPSLVRTIVNDFGPTIGSYPSVDARVLDRSALSVFLHRNLDALPLGKYRPLHDPGNAVRPLLDLFSSLAHCGVSPEEYLGYVETLETELLEIPAAGREGLVVNDKAAAVSSEPTAXXXXXXXXXXXXXXXXXXLEAEGWRAHLAGERDKANSYEAFVALKRREGVADYSDHLLLARRVLKESPSAKAALSLRLSHIYVDDLQEYSPAMVGVLADLVAPGVGITAAIDP------FLAATSSNFPAGHVLGAEHSAMARFKAAFPDAMEMPLVGNRHSTDAI 1127
            A     G   ++ G  G+GKT  LT +++    +  + P HE        +LA++  +   A +++R+DL+ PLG       TF      +  +F   +G   S + RVL  +   +F+  +L  LPL +YRP  DP   VR LLDLF       VSP+EY  + + L   +     AG +  V  D A A                                     + + A  Y+A+ ALK +EGV D+ D + L  R+L++ P+A   L  R  ++ VD+ Q+ + A   +L  LV P   ITA  D       +  AT  NF A             F++ +PDA  + LV NR S+  +
Sbjct:   27 AVEHGAGPLLIVAG-AGTGKTHVLTARVVHLIAAGAAKP-HE--------ILAVTFTEKAAAGMQERVDLNTPLGLNDAAIKTFHGFGDEVFREFALELGR--SGELRVLSSAEQVIFVREHLYDLPLRRYRPAGDPLEYVRALLDLFGRARDEDVSPDEYAAHAKKLRDAV----GAGIDADVRADDADA-------------------------------------QEELAAVYQAYTALKEKEGVIDFGDQIALCLRLLRDHPAAARRLQNRYRYVLVDEFQDTNDAQFKLLRLLVEPHRNITAVGDDDQSIFAWRGATLGNFEA-------------FRSTYPDATVVTLVQNRRSSQGL 324          
BLAST of mRNA_P-littoralis_Contig116.53.1 vs. uniprot
Match: A0A485KYY6_9STRA (DNA helicase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KYY6_9STRA)

HSP 1 Score: 108 bits (269), Expect = 7.300e-20
Identity = 85/289 (29.41%), Postives = 134/289 (46.37%), Query Frame = 3
Query: 2754 LSFSSISSFAACPHSYYLQHVLNVSPPPNPRMVYGRAMHESVAAVLRYVVNGXXXXXXXXXXXXXXTLEAVVEEFNLHFGGCAFESAVQVRTLRAAGVAGLEAFMS--RLIEGGCVVGGHGRGDGAAGSSGDAQLLVERKFMVKVPEANVILSGIFDRVDIDLPSASAGVGGGASRPALLSITDYKSNV--GEKDPKRMVRDNLQLRVYALAAEKLFGFFPTELAIESIED--GRRG-AVVPSPADADIA-MEAISKTAAAVRAESFDATPSFQACTFCGFKHMCQHSV 3596
            +S+S I  +  CPH YYL  VL ++PP  P +VYGR++HE +AA  R   +                LEA    +     GC F S  +   L     A L +F+      +GG ++                   VE  F V +PEANV L G++DR++               R   + + ++KSN+  G ++ +++  ++LQL++Y LA  + +G  P    + S+E   GR    +VP  +  D A +E +S TAA +RA  FD  PS+  C +C F  +C   +
Sbjct:  717 VSYSQIDEYTRCPHRYYLSRVLQLAPPMAPGLVYGRSLHEGIAAWSRLPAS---------LSATSDALEAFTSSWET---GC-FRSKAEEMQLFDQAQATLLSFIDFEETHKGGTII-----------------EAVELPFEVDLPEANVRLKGVWDRIE--------------QREDGVYVVEFKSNLSNGPRNNQKLANESLQLQLYMLAYARQYGVAPAGGVLRSLESPHGRNSEGIVPYASSTDAAVLEVVSTTAARIRAREFDPLPSYLGCAYCPFADVCASKI 961          
BLAST of mRNA_P-littoralis_Contig116.53.1 vs. uniprot
Match: A0A662WPA4_9STRA (UvrD-like helicase C-terminal domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WPA4_9STRA)

HSP 1 Score: 104 bits (260), Expect = 9.890e-19
Identity = 97/331 (29.31%), Postives = 141/331 (42.60%), Query Frame = 3
Query: 2697 VTDVRLFVPPXXXXXAPLRLSFSSISSFAACPHSYYLQHVLNVSPPPNPRMVYGRAMHESVAAVLRYVVNGXXXXXXXXXXXXXXTLEAVVEEFNLHFGGCA---FESAVQVRTLRAAGVAGLEAFMSRLIEGGCVVGGHGRGDGAAGSSGDAQLL----VERKFMVKVPEANVILSGIFDRVDIDLPSASAGVGGGASRPALLSITDYKSNVG--EKDPKRMVRDNLQLRVYALAAEKLFGFFPTELAIE-----------------SIEDGRRGAVVPSPADADIAMEAISKTAAAVRAESFDATPSFQACTFCGFKHMCQHSVITSAA 3611
            VT  RL          P  LS+S IS +  CPH YYL  V+ +    +  M++GRA+HE VAA    +                  +EA  E F   + G     F S  Q       G+  L  FM    E                   D +L     VE  F   VPEANV L G++DR+D      S+G G G+S      I ++KSN+G  E+D +++  ++LQL++Y  A  ++FG  P    ++                 +++ G  G V+ S A A  A  AI + A+ +R  +F+ TP F  C FC +     HS   +AA
Sbjct:  857 VTARRLAASASSGSYEPSHLSYSQISEYLRCPHQYYLSRVMKLEGDVSTSMMFGRALHEGVAAFATTLAAAQLDGDASDEAKTLAAVEAE-EAFARAWVGDGHGLFASKEQSEFFFDRGMVALWEFMRSHHE-------------------DPRLQEILHVEHAFAFHVPEANVELRGVWDRID----RVSSGDGSGSSS---FLIKEFKSNMGGAERDMRKLAAESLQLKMYMYAFRQVFGEAPLGAKLQLIGGENAVKDASKRRRRTVDSGEDGLVLFSEAAAQEAEAAIVEVASGLRRGAFEPTPGFAECAFCPYAGSACHSATDAAA 1160          
BLAST of mRNA_P-littoralis_Contig116.53.1 vs. uniprot
Match: A0A6G0XWR5_9STRA (DNA helicase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWR5_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.120e-18
Identity = 80/290 (27.59%), Postives = 130/290 (44.83%), Query Frame = 3
Query: 2754 LSFSSISSFAACPHSYYLQHVLNVSPPPNPRMVYGRAMHESVAAVLRYVVNGXXXXXXXXXXXXXXTLEAVVEEFNLHFGGCAFESAVQVRTLRAAGVAGLEAFMS------RLIEGGCVVGGHGRGDGAAGSSGDAQLLVERKFMVKVPEANVILSGIFDRVDIDLPSASAGVGGGASRPALLSITDYKSNVG--EKDPKRMVRDNLQLRVYALAAEKLFGFFPTELAIESIED----GRRGAVVPSPADADIAMEAISKTAAAVRAESFDATPSFQACTFCGFKHMCQ 3587
            LSFS I  +  CP+ Y+L  V+ + P  +P +V+GR++HES+AA                        E  +E F+  +    F S+ + + L   G   L +F+S      R+IE                        VE  F V + EA V L G++DR++               R   L I ++KSN+   +++ + +   NLQL++Y +A  +L G  PT   + S+E        G V+ SP+  + A++AI   A ++R + FD  P+F  C+FC F  +C 
Sbjct:  719 LSFSQIDEYMRCPYRYFLSRVVKMEPKMSPGLVFGRSIHESIAA-----------WSQSSDLQSPQAYENALEAFSSSWQTGCFRSSEEEKRLFEQGQQTLSSFISFESSQNRVIE-----------------------AVEMPFQVDITEAGVRLKGVWDRIE--------------RRGEELYIVEFKSNLSNAQRNNQTLAESNLQLQLYMMAFARLQGISPTGAILRSLETTHGLNEEGIVLHSPSADETAIKAIVDAAQSIRQQKFDPLPTFMGCSFCPFADICH 960          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig116.53.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KME1_9PHAE0.000e+064.47DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FWN6_ECTSI0.000e+062.81DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A067CEC3_SAPPC8.620e-2432.30UvrD-like helicase C-terminal domain-containing pr... [more]
A0A1V9ZJZ9_9STRA1.040e-2233.10Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A1Q7HMG1_9CHLR1.830e-2228.57DNA helicase n=1 Tax=Chloroflexi bacterium 13_1_40... [more]
A0A535DU18_9CHLR3.140e-2228.02DNA helicase n=1 Tax=Chloroflexi bacterium TaxID=2... [more]
A0A536HPY1_9CHLR9.510e-2228.02DNA helicase n=3 Tax=Chloroflexi bacterium TaxID=2... [more]
A0A485KYY6_9STRA7.300e-2029.41DNA helicase n=1 Tax=Aphanomyces stellatus TaxID=1... [more]
A0A662WPA4_9STRA9.890e-1929.31UvrD-like helicase C-terminal domain-containing pr... [more]
A0A6G0XWR5_9STRA1.120e-1827.59DNA helicase n=1 Tax=Aphanomyces euteiches TaxID=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig116contigP-littoralis_Contig116:178945..183856 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FWN6
PFAMsPDDEXK_1,UvrD_C
Model size4660
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue0.0
EggNOG OGs28MGR@1|root,2QU06@2759|Eukaryota
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-06_001330.1
DescriptionPD-(D/E)XK nuclease superfamily
Cds size3573
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789479.6134026-UTR-P-littoralis_Contig116:178944..1799871680789479.6134026-UTR-P-littoralis_Contig116:178944..179987Pylaiella littoralis U1_48UTRP-littoralis_Contig116 178945..179987 -
1680789479.644365-UTR-P-littoralis_Contig116:183812..1838561680789479.644365-UTR-P-littoralis_Contig116:183812..183856Pylaiella littoralis U1_48UTRP-littoralis_Contig116 183813..183856 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789479.6231322-CDS-P-littoralis_Contig116:179987..1815651680789479.6231322-CDS-P-littoralis_Contig116:179987..181565Pylaiella littoralis U1_48CDSP-littoralis_Contig116 179988..181565 -
1680789479.6355114-CDS-P-littoralis_Contig116:181817..1838121680789479.6355114-CDS-P-littoralis_Contig116:181817..183812Pylaiella littoralis U1_48CDSP-littoralis_Contig116 181818..183812 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig116.53.1prot_P-littoralis_Contig116.53.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig116 179988..183812 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig116.53.1

>prot_P-littoralis_Contig116.53.1 ID=prot_P-littoralis_Contig116.53.1|Name=mRNA_P-littoralis_Contig116.53.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1191bp
MISAAPRSTGQATLITGFLGSGKTWSLTNQLLQAARSSESSPRHEEASSG
SGSLLALSTRQADCAALRQRIDLDRPLGCTKCDAVTFPSLVRTIVNDFGP
TIGSYPSVDARVLDRSALSVFLHRNLDALPLGKYRPLHDPGNAVRPLLDL
FSSLAHCGVSPEEYLGYVETLETELLEIPAAGREGLVVNDKAAAVSSEPT
ATATATAVAVASRARLRAELEAEGWRAHLAGERDKANSYEAFVALKRREG
VADYSDHLLLARRVLKESPSAKAALSLRLSHIYVDDLQEYSPAMVGVLAD
LVAPGVGITAAIDPFLAATSSNFPAGHVLGAEHSAMARFKAAFPDAMEMP
LVGNRHSTDAIQVAMEALKPRDTPVGAKDKKNNKKAAAAASQAAGDAAAA
ADSPAAATSAVVVGHAPSAAPDETPASASSAAASEQAAAVEVRGSRLTCL
TFQTEEDEVSALGRRVRRLIDGGVSPGDIGVAAVGGWGVADSLVAAVSAV
GVPVEGPTRFSSVFDSETPRMLMSFLRCLVHPSESTPLLHLLMTCPAYAL
PAGELTSALEGHLSRYVPLRSFLQTSHLGEGQDTDPRGGENGVSANARST
AGRLLSDVNRFAESAKRKGVREIMRDFLRYTGQLERLEEPTTTEEEKQGR
SVAELFELAVKAEKQAGGDNVALVEPVLRLYRRHGTGYMDSSRFAHDETT
TDNGKSETRGGPSSCGGGAVRIFQPGKDWEGGDHRFFDTVFIPFCTRGRL
PGNLRTARLPVPGPFYGAPEPRDSASLRSQADLARAGHENRARAMLYVAL
GYARREVCLSVSASVRRGKTHLNPSPFLREILEEDAPLEWKATIASSEKE
GQEEPDRLDGVADGGRGDLDVVPKHSVNGEGGGGVTDVRLFVPPPPPPPA
PLRLSFSSISSFAACPHSYYLQHVLNVSPPPNPRMVYGRAMHESVAAVLR
YVVNGGGSGGDSGGGGPPPTLEAVVEEFNLHFGGCAFESAVQVRTLRAAG
VAGLEAFMSRLIEGGCVVGGHGRGDGAAGSSGDAQLLVERKFMVKVPEAN
VILSGIFDRVDIDLPSASAGVGGGASRPALLSITDYKSNVGEKDPKRMVR
DNLQLRVYALAAEKLFGFFPTELAIESIEDGRRGAVVPSPADADIAMEAI
SKTAAAVRAESFDATPSFQACTFCGFKHMCQHSVITSAAL*
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mRNA from alignment at P-littoralis_Contig116:178945..183856-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig116.53.1 ID=mRNA_P-littoralis_Contig116.53.1|Name=mRNA_P-littoralis_Contig116.53.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4912bp|location=Sequence derived from alignment at P-littoralis_Contig116:178945..183856- (Pylaiella littoralis U1_48)
CCACCTGCCGCTGTTGGTGTGCATCCGTCTTACCACCTTGCTGGATGATC TCGGCAGCACCACGATCGACCGGCCAGGCAACTCTTATCACTGGCTTTCT AGGCTCCGGCAAGACATGGTCCTTGACGAACCAGCTCTTGCAGGCGGCAA GGTCCAGTGAATCATCTCCACGACATGAAGAAGCTAGCTCGGGATCAGGA TCACTGCTGGCACTGAGCACCAGGCAAGCCGATTGCGCCGCGCTGCGACA GAGGATCGACCTTGACCGACCGCTAGGATGCACAAAATGCGATGCTGTAA CGTTTCCGTCGCTGGTCCGGACGATCGTGAACGACTTCGGCCCTACCATT GGAAGCTATCCCTCCGTCGACGCTCGCGTGCTGGACCGGAGTGCCCTCTC CGTCTTCCTGCATCGCAACCTTGACGCTCTACCTCTTGGCAAGTACCGCC CTTTGCACGACCCGGGCAACGCTGTACGGCCGTTGCTTGACCTCTTTTCC AGTCTTGCGCACTGCGGGGTCTCGCCCGAAGAGTACCTCGGGTACGTCGA GACGCTGGAGACGGAGCTTCTGGAAATACCCGCCGCTGGCCGAGAAGGCC TAGTAGTGAACGATAAAGCCGCGGCGGTTTCCAGCGAGCCTACGGCGACG GCGACGGCGACGGCGGTGGCGGTGGCGTCGCGGGCGCGCCTACGGGCGGA GCTTGAAGCCGAGGGATGGCGCGCGCACTTGGCTGGGGAGCGAGACAAGG CCAACAGCTACGAAGCTTTCGTAGCTCTCAAGAGGCGCGAAGGGGTCGCG GACTACTCCGACCACCTGCTGCTGGCCCGACGAGTTTTGAAAGAGAGCCC CAGCGCTAAGGCCGCGCTGTCGCTGCGTTTATCACATATCTACGTAGACG ACTTGCAGGAGTACTCACCGGCGATGGTTGGCGTTCTCGCGGACCTTGTT GCCCCCGGGGTTGGGATTACGGCAGCCATAGATCCTTTTTTAGCAGCAAC GTCTTCCAATTTCCCTGCTGGACATGTGTTGGGCGCCGAGCACTCTGCCA TGGCTCGGTTCAAGGCAGCGTTTCCGGATGCTATGGAGATGCCTTTAGTT GGCAACCGCCACAGCACCGATGCTATTCAGGTGGCCATGGAAGCGCTTAA ACCCCGCGATACTCCTGTAGGGGCGAAGGATAAGAAGAACAACAAAAAGG CGGCGGCGGCGGCTTCACAGGCGGCCGGAGATGCTGCTGCTGCTGCTGAT TCTCCCGCTGCTGCTACCTCTGCTGTTGTAGTGGGACACGCCCCGTCAGC AGCTCCAGACGAGACGCCGGCGTCGGCATCATCGGCGGCTGCATCAGAAC AAGCGGCGGCGGTAGAAGTTAGAGGCAGCAGGCTGACCTGCCTGACGTTT CAAACGGAGGAAGACGAGGTGAGCGCGTTGGGGAGGAGAGTCAGACGGCT GATCGACGGAGGGGTGAGCCCGGGTGACATCGGCGTCGCCGCCGTAGGAG GTTGGGGCGTTGCCGACAGTCTGGTTGCAGCGGTAAGTGCGGTGGGGGTA CCGGTGGAGGGCCCCACGCGCTTCTCGTCGGTATTCGACAGCGAGACGCC GCGAATGCTCATGTCTTTCCTCCGGTGCCTCGTGCATCCCTCCGAGTCTA CCCCGCTGCTACACCTGCTCATGACCTGCCCAGCTTATGCGTTACCGGCC GGCGAGCTCACGTCAGCCCTGGAAGGACACCTGTCGCGGTACGTGCCTCT GCGGTCGTTCTTGCAAACCAGTCACCTGGGTGAGGGGCAGGACACAGACC CGCGGGGAGGGGAAAACGGGGTGTCGGCCAATGCTAGGAGCACCGCAGGG AGGCTCTTATCGGACGTAAATCGATTTGCTGAAAGTGCCAAAAGGAAAGG GGTGCGGGAAATCATGCGCGACTTTTTGCGGTATACGGGACAGCTGGAGC GGCTGGAGGAGCCCACAACAACGGAGGAAGAAAAACAGGGGCGGTCGGTG GCAGAGCTGTTCGAGTTGGCTGTGAAGGCAGAGAAGCAGGTGATCGCGTT GTTTTTGCTCTGCCAGTATGTGTGTAGGCTTGCCTTCTCGGTCGGCGACG TTTCGGTCCTTGCATGTGTACTTCGAAGTATCAAATTGGTAGCATCTTCC TTTCAGGTACGAATTTCTTGTGCGTACAGTACGTCATGTGTGCCATCTAC CGGCGTACAGGCCCTGCGACACATCAAGAATGCATCGTTACGGACCCCAC GCTCTCTCGCTTGCTTCCATCCTTGTCGACACGTGCAACAGGCCGGGGGA GACAATGTTGCGCTCGTCGAGCCGGTCCTCCGCTTGTACCGGCGCCATGG CACAGGGTACATGGACTCTTCCCGCTTCGCCCACGACGAGACAACAACCG ACAACGGCAAATCTGAAACGCGAGGGGGCCCGTCAAGCTGTGGTGGCGGC GCCGTGCGCATCTTCCAACCAGGCAAAGACTGGGAAGGCGGCGACCACCG CTTCTTCGACACCGTTTTCATTCCGTTCTGCACCCGAGGGCGCCTTCCGG GAAACCTCCGAACGGCGCGCCTGCCTGTTCCGGGACCGTTCTACGGCGCA CCCGAGCCTCGAGACTCGGCGAGCCTGCGATCTCAGGCCGATCTCGCGCG CGCCGGCCACGAGAACCGAGCCCGCGCGATGCTGTACGTCGCGCTAGGTT ACGCCAGGCGGGAGGTCTGCCTCAGCGTGTCCGCCAGCGTCAGGCGTGGG AAGACCCACCTCAATCCTAGCCCGTTTCTTCGTGAGATTCTAGAAGAAGA CGCACCGCTGGAGTGGAAAGCGACGATCGCATCTTCGGAGAAGGAAGGGC AAGAAGAACCAGATCGGTTGGATGGCGTGGCCGACGGGGGTCGGGGCGAT CTCGACGTGGTACCGAAACACTCTGTTAATGGAGAAGGGGGTGGTGGCGT GACCGATGTCCGTTTGTTTGTGCCCCCGCCTCCACCGCCACCGGCTCCGC TCCGCCTGTCTTTCTCCTCCATATCGTCGTTCGCTGCGTGCCCGCACAGC TACTACCTTCAGCATGTGCTTAATGTGTCCCCTCCGCCGAACCCGAGAAT GGTGTACGGTCGGGCGATGCACGAGAGTGTCGCCGCGGTCCTTCGTTATG TGGTTAACGGCGGCGGCAGCGGCGGCGACAGCGGCGGTGGCGGTCCGCCC CCAACCCTGGAAGCCGTTGTGGAAGAATTTAATCTCCATTTTGGTGGGTG CGCGTTCGAGTCTGCGGTGCAGGTGCGCACCTTGCGGGCAGCTGGCGTGG CCGGCTTGGAAGCTTTCATGTCCAGGCTCATAGAAGGTGGTTGTGTTGTT GGTGGCCACGGTCGGGGTGATGGTGCCGCAGGGTCGAGCGGCGACGCGCA GCTTCTCGTGGAGCGAAAGTTTATGGTGAAGGTCCCCGAGGCGAACGTCA TTCTCTCGGGTATTTTCGACAGGGTAGATATCGATCTGCCTTCGGCGTCA GCAGGCGTTGGGGGAGGGGCTTCTCGTCCCGCATTGTTGTCGATCACGGA CTACAAGTCCAATGTCGGTGAAAAAGACCCGAAGCGGATGGTGCGGGATA ATCTCCAGCTGCGAGTCTATGCGCTGGCAGCGGAAAAACTTTTCGGATTT TTCCCGACGGAGTTAGCGATAGAATCGATCGAGGACGGGCGAAGGGGGGC AGTGGTGCCATCTCCGGCCGACGCGGACATCGCCATGGAAGCGATCTCCA AAACGGCGGCTGCGGTTCGTGCGGAGAGTTTCGATGCCACCCCGTCTTTT CAGGCGTGTACTTTCTGCGGCTTCAAGCACATGTGCCAGCATTCGGTCAT TACAAGTGCGGCCCTGTAGAACTTTTGCTAGGGATAGAGTAGTGTATCAT ATTTCGCGTTACTTGTTTACCACTGTTGTTACGTTTCTTGAACGAGTGAG CGTCCCGGTAGAAGATCATGTTTGTGACCCCTTTCTGTTGGGTACTTCGG AGTTTGTTGTACCAACTTTAGTTTTACCCTGGGTGGGCTTCCTGTCATGT GTTTGGACGCAGTTAGTCCAATGCATGTAGAAATAATATTCGACGACACC GAATATGAGGCGATCAACAGCCAAATTCTTACCCCTTTTTTGTTGAGTGC TTCCAAGTTTGTTGAATCCACTTGAATTCCACCCTGGGTGGGCTTTCTGT GATGTTGTTGGACTCTGTGAGCCCAATGTGTGTAGAAATAATCTTCAACG ACACCGAATATGAGGCGATCAACAGCCAAATTCTTAACCCTTTTTTGTTG AGTGCTTTGAAATTTGTTGAATCCACTTGAATTCCTCCCTGGGTGGGTTT TCTGTGATGTTGTTGGACTCTGTGAGCCCAATGTGTGTAGAAATAATCTT CACCGACGAGACGGAAAATTAGGCGAACAACAGCCAAATTACCAACCCCT TTTTGTTGAGTACTTCAAAGTTTGTTGAATCTACTTGAATTTTAAGTTGG GTGGGCTCTCTTCGATGTTGTTGGGCTCAGCTAGCCCGATGTGCGTGAAA ATAATTTTCACCAACAAGACGGAATATGAGGCGATCGACAGCCAATCCGA CAGAGGAGTTGCCAGCAGTTTTCTGGTCAGGAGAGGAATCGAGCAACATG CAGAGTAGACAGGTGTGATGTGGATCACAGCGCGAGCACAAGGCCACCAT CGAGCTGGTTTTTCGCCCGATGCTGGTGCCACAAACAACCTGTCGTGCGA TATTTCGAGCATCTTTTGGCCAATGCGGCCCACACAACTAGTCTGCCGTC GGGTTGGTCTGGGACTGTTTTTGAGATGTAGTGTGTTGAAGGGCGGGGCT TCTGAGTGCTCGGAACGCGGTTCTGTTAAATATTGATGCCACATATTTTG GTTCGTGTTGAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig116:178945..183856-

>mRNA_P-littoralis_Contig116.53.1 ID=mRNA_P-littoralis_Contig116.53.1|Name=mRNA_P-littoralis_Contig116.53.1|organism=Pylaiella littoralis U1_48|type=CDS|length=3573bp|location=Sequence derived from alignment at P-littoralis_Contig116:178945..183856- (Pylaiella littoralis U1_48)
ATGATCTCGGCAGCACCACGATCGACCGGCCAGGCAACTCTTATCACTGG
CTTTCTAGGCTCCGGCAAGACATGGTCCTTGACGAACCAGCTCTTGCAGG
CGGCAAGGTCCAGTGAATCATCTCCACGACATGAAGAAGCTAGCTCGGGA
TCAGGATCACTGCTGGCACTGAGCACCAGGCAAGCCGATTGCGCCGCGCT
GCGACAGAGGATCGACCTTGACCGACCGCTAGGATGCACAAAATGCGATG
CTGTAACGTTTCCGTCGCTGGTCCGGACGATCGTGAACGACTTCGGCCCT
ACCATTGGAAGCTATCCCTCCGTCGACGCTCGCGTGCTGGACCGGAGTGC
CCTCTCCGTCTTCCTGCATCGCAACCTTGACGCTCTACCTCTTGGCAAGT
ACCGCCCTTTGCACGACCCGGGCAACGCTGTACGGCCGTTGCTTGACCTC
TTTTCCAGTCTTGCGCACTGCGGGGTCTCGCCCGAAGAGTACCTCGGGTA
CGTCGAGACGCTGGAGACGGAGCTTCTGGAAATACCCGCCGCTGGCCGAG
AAGGCCTAGTAGTGAACGATAAAGCCGCGGCGGTTTCCAGCGAGCCTACG
GCGACGGCGACGGCGACGGCGGTGGCGGTGGCGTCGCGGGCGCGCCTACG
GGCGGAGCTTGAAGCCGAGGGATGGCGCGCGCACTTGGCTGGGGAGCGAG
ACAAGGCCAACAGCTACGAAGCTTTCGTAGCTCTCAAGAGGCGCGAAGGG
GTCGCGGACTACTCCGACCACCTGCTGCTGGCCCGACGAGTTTTGAAAGA
GAGCCCCAGCGCTAAGGCCGCGCTGTCGCTGCGTTTATCACATATCTACG
TAGACGACTTGCAGGAGTACTCACCGGCGATGGTTGGCGTTCTCGCGGAC
CTTGTTGCCCCCGGGGTTGGGATTACGGCAGCCATAGATCCTTTTTTAGC
AGCAACGTCTTCCAATTTCCCTGCTGGACATGTGTTGGGCGCCGAGCACT
CTGCCATGGCTCGGTTCAAGGCAGCGTTTCCGGATGCTATGGAGATGCCT
TTAGTTGGCAACCGCCACAGCACCGATGCTATTCAGGTGGCCATGGAAGC
GCTTAAACCCCGCGATACTCCTGTAGGGGCGAAGGATAAGAAGAACAACA
AAAAGGCGGCGGCGGCGGCTTCACAGGCGGCCGGAGATGCTGCTGCTGCT
GCTGATTCTCCCGCTGCTGCTACCTCTGCTGTTGTAGTGGGACACGCCCC
GTCAGCAGCTCCAGACGAGACGCCGGCGTCGGCATCATCGGCGGCTGCAT
CAGAACAAGCGGCGGCGGTAGAAGTTAGAGGCAGCAGGCTGACCTGCCTG
ACGTTTCAAACGGAGGAAGACGAGGTGAGCGCGTTGGGGAGGAGAGTCAG
ACGGCTGATCGACGGAGGGGTGAGCCCGGGTGACATCGGCGTCGCCGCCG
TAGGAGGTTGGGGCGTTGCCGACAGTCTGGTTGCAGCGGTAAGTGCGGTG
GGGGTACCGGTGGAGGGCCCCACGCGCTTCTCGTCGGTATTCGACAGCGA
GACGCCGCGAATGCTCATGTCTTTCCTCCGGTGCCTCGTGCATCCCTCCG
AGTCTACCCCGCTGCTACACCTGCTCATGACCTGCCCAGCTTATGCGTTA
CCGGCCGGCGAGCTCACGTCAGCCCTGGAAGGACACCTGTCGCGGTACGT
GCCTCTGCGGTCGTTCTTGCAAACCAGTCACCTGGGTGAGGGGCAGGACA
CAGACCCGCGGGGAGGGGAAAACGGGGTGTCGGCCAATGCTAGGAGCACC
GCAGGGAGGCTCTTATCGGACGTAAATCGATTTGCTGAAAGTGCCAAAAG
GAAAGGGGTGCGGGAAATCATGCGCGACTTTTTGCGGTATACGGGACAGC
TGGAGCGGCTGGAGGAGCCCACAACAACGGAGGAAGAAAAACAGGGGCGG
TCGGTGGCAGAGCTGTTCGAGTTGGCTGTGAAGGCAGAGAAGCAGGCCGG
GGGAGACAATGTTGCGCTCGTCGAGCCGGTCCTCCGCTTGTACCGGCGCC
ATGGCACAGGGTACATGGACTCTTCCCGCTTCGCCCACGACGAGACAACA
ACCGACAACGGCAAATCTGAAACGCGAGGGGGCCCGTCAAGCTGTGGTGG
CGGCGCCGTGCGCATCTTCCAACCAGGCAAAGACTGGGAAGGCGGCGACC
ACCGCTTCTTCGACACCGTTTTCATTCCGTTCTGCACCCGAGGGCGCCTT
CCGGGAAACCTCCGAACGGCGCGCCTGCCTGTTCCGGGACCGTTCTACGG
CGCACCCGAGCCTCGAGACTCGGCGAGCCTGCGATCTCAGGCCGATCTCG
CGCGCGCCGGCCACGAGAACCGAGCCCGCGCGATGCTGTACGTCGCGCTA
GGTTACGCCAGGCGGGAGGTCTGCCTCAGCGTGTCCGCCAGCGTCAGGCG
TGGGAAGACCCACCTCAATCCTAGCCCGTTTCTTCGTGAGATTCTAGAAG
AAGACGCACCGCTGGAGTGGAAAGCGACGATCGCATCTTCGGAGAAGGAA
GGGCAAGAAGAACCAGATCGGTTGGATGGCGTGGCCGACGGGGGTCGGGG
CGATCTCGACGTGGTACCGAAACACTCTGTTAATGGAGAAGGGGGTGGTG
GCGTGACCGATGTCCGTTTGTTTGTGCCCCCGCCTCCACCGCCACCGGCT
CCGCTCCGCCTGTCTTTCTCCTCCATATCGTCGTTCGCTGCGTGCCCGCA
CAGCTACTACCTTCAGCATGTGCTTAATGTGTCCCCTCCGCCGAACCCGA
GAATGGTGTACGGTCGGGCGATGCACGAGAGTGTCGCCGCGGTCCTTCGT
TATGTGGTTAACGGCGGCGGCAGCGGCGGCGACAGCGGCGGTGGCGGTCC
GCCCCCAACCCTGGAAGCCGTTGTGGAAGAATTTAATCTCCATTTTGGTG
GGTGCGCGTTCGAGTCTGCGGTGCAGGTGCGCACCTTGCGGGCAGCTGGC
GTGGCCGGCTTGGAAGCTTTCATGTCCAGGCTCATAGAAGGTGGTTGTGT
TGTTGGTGGCCACGGTCGGGGTGATGGTGCCGCAGGGTCGAGCGGCGACG
CGCAGCTTCTCGTGGAGCGAAAGTTTATGGTGAAGGTCCCCGAGGCGAAC
GTCATTCTCTCGGGTATTTTCGACAGGGTAGATATCGATCTGCCTTCGGC
GTCAGCAGGCGTTGGGGGAGGGGCTTCTCGTCCCGCATTGTTGTCGATCA
CGGACTACAAGTCCAATGTCGGTGAAAAAGACCCGAAGCGGATGGTGCGG
GATAATCTCCAGCTGCGAGTCTATGCGCTGGCAGCGGAAAAACTTTTCGG
ATTTTTCCCGACGGAGTTAGCGATAGAATCGATCGAGGACGGGCGAAGGG
GGGCAGTGGTGCCATCTCCGGCCGACGCGGACATCGCCATGGAAGCGATC
TCCAAAACGGCGGCTGCGGTTCGTGCGGAGAGTTTCGATGCCACCCCGTC
TTTTCAGGCGTGTACTTTCTGCGGCTTCAAGCACATGTGCCAGCATTCGG
TCATTACAAGTGCGGCCCTGTAG
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