prot_P-littoralis_Contig611.17.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig611.17.1
Unique Nameprot_P-littoralis_Contig611.17.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length81
Homology
BLAST of mRNA_P-littoralis_Contig611.17.1 vs. uniprot
Match: A0A6H5JNH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNH6_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 8.190e-49
Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 0
Query:    1 MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEYQHADFLTKAISRESFDLHRDFVMNLQ 80
            MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSE+QHADFLTKAIS+ESF LHRDFVMNLQ
Sbjct:   40 MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESFALHRDFVMNLQ 119          
BLAST of mRNA_P-littoralis_Contig611.17.1 vs. uniprot
Match: A0A6H5KPI2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPI2_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 1.390e-46
Identity = 74/80 (92.50%), Postives = 76/80 (95.00%), Query Frame = 0
Query:    1 MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEYQHADFLTKAISRESFDLHRDFVMNLQ 80
            MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEIS THVTSE+QHADFLTKAIS+E F LHRDFVMN Q
Sbjct:    1 MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISNTHVTSEFQHADFLTKAISKEPFALHRDFVMNSQ 80          
BLAST of mRNA_P-littoralis_Contig611.17.1 vs. uniprot
Match: A0A6H5JT91_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT91_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 3.010e-45
Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 0
Query:    1 MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEYQHADFLTKAISRESFDLHRDFVMNLQ 80
            MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSE+QHADFLTKAIS+ESF LHRDFVMNLQ
Sbjct:  351 MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESFALHRDFVMNLQ 430          
BLAST of mRNA_P-littoralis_Contig611.17.1 vs. uniprot
Match: A0A6H5K826_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K826_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 1.870e-44
Identity = 71/80 (88.75%), Postives = 75/80 (93.75%), Query Frame = 0
Query:    1 MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEYQHADFLTKAISRESFDLHRDFVMNLQ 80
            MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHV +++QHADFLTKAI +E   LHRDFVMNLQ
Sbjct:   24 MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAICKEPCALHRDFVMNLQ 103          
BLAST of mRNA_P-littoralis_Contig611.17.1 vs. uniprot
Match: A0A6H5K9U4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U4_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 1.410e-43
Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 0
Query:    1 MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEYQHADFLTKAISRESFDLHRDFVMNLQ 80
            MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSE+QHADFLTKAIS+ESF LHRDFVMNLQ
Sbjct:  700 MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESFALHRDFVMNLQ 779          
BLAST of mRNA_P-littoralis_Contig611.17.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 2.050e-43
Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 0
Query:    1 MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEYQHADFLTKAISRESFDLHRDFVMNLQ 80
            MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSE+QHADFLTKAIS+ESF LHRDFVMNLQ
Sbjct: 1393 MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESFALHRDFVMNLQ 1472          
BLAST of mRNA_P-littoralis_Contig611.17.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 3.340e-43
Identity = 73/80 (91.25%), Postives = 77/80 (96.25%), Query Frame = 0
Query:    1 MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEYQHADFLTKAISRESFDLHRDFVMNLQ 80
            MPCIPVFEDNQGAIQI HNPITNSNSKHIDVRHHFIRELVERKEISITHV +++QHADFLTKAIS+ESF LHRDFVMNLQ
Sbjct:  297 MPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAISKESFALHRDFVMNLQ 376          
BLAST of mRNA_P-littoralis_Contig611.17.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 150 bits (379), Expect = 5.430e-43
Identity = 73/80 (91.25%), Postives = 77/80 (96.25%), Query Frame = 0
Query:    1 MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEYQHADFLTKAISRESFDLHRDFVMNLQ 80
            MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISIT+V + +QHADFLTKAIS+ESF LHRDFVMNLQ
Sbjct:  242 MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITNVPTPFQHADFLTKAISKESFALHRDFVMNLQ 321          
BLAST of mRNA_P-littoralis_Contig611.17.1 vs. uniprot
Match: A0A6H5JTT9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT9_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 8.150e-43
Identity = 71/79 (89.87%), Postives = 73/79 (92.41%), Query Frame = 0
Query:    1 MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEYQHADFLTKAISRESFDLHRDFVMNL 79
            MPCIPVFEDN   IQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSE+QH D LTKAIS+ESF LHRDFVMNL
Sbjct:   90 MPCIPVFEDNNQRIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHVDSLTKAISKESFALHRDFVMNL 168          
BLAST of mRNA_P-littoralis_Contig611.17.1 vs. uniprot
Match: A0A6H5K684_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K684_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 1.110e-42
Identity = 72/77 (93.51%), Postives = 75/77 (97.40%), Query Frame = 0
Query:    1 MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEYQHADFLTKAISRESFDLHRDFVM 77
            MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSE+QHADFLTKA S+ESF LHRDFV+
Sbjct:  232 MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKATSKESFALHRDFVI 308          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig611.17.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNH6_9PHAE8.190e-4996.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPI2_9PHAE1.390e-4692.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JT91_9PHAE3.010e-4596.25Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K826_9PHAE1.870e-4488.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9U4_9PHAE1.410e-4396.25Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JHY5_9PHAE2.050e-4396.25Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5L4G9_9PHAE3.340e-4391.25Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KP70_9PHAE5.430e-4391.25Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTT9_9PHAE8.150e-4389.87Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K684_9PHAE1.110e-4293.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 5..75
NoneNo IPR availablePANTHERPTHR11439:SF343SUBFAMILY NOT NAMEDcoord: 5..75
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 4..67
e-value: 1.63352E-29
score: 99.8501

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig611contigP-littoralis_Contig611:124197..124439 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig611.17.1mRNA_P-littoralis_Contig611.17.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig611 124096..124439 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig611.17.1 ID=prot_P-littoralis_Contig611.17.1|Name=mRNA_P-littoralis_Contig611.17.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=81bp
MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHV
TSEYQHADFLTKAISRESFDLHRDFVMNLQ*
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