prot_P-littoralis_Contig116.37.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig116.37.2
Unique Nameprot_P-littoralis_Contig116.37.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length316
Homology
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BLAST of mRNA_P-littoralis_Contig116.37.2 vs. uniprot
Match: A0A6H5L290_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L290_9PHAE)

HSP 1 Score: 342 bits (877), Expect = 1.150e-114
Identity = 192/269 (71.38%), Postives = 213/269 (79.18%), Query Frame = 0 
Query:   41 RDRPAMSAELS-FSRGQLLRVIPAAVGAVLLGTAR-TKPVTAALPTSEDYEFGTGSKKQQNRAXXXXXXXXXXPREDSTDACPNCSLSERRKRAASSSEATTDPISPEQTKRPEVQDELAIPLPKSSVNPSSPVEVVKAVSGELDRMQALVNKERWGDALTRLRSYPLTTLKSPTLGMGSVGDVARALGVSTSKASDILEASMEAGLTLREVEDVVFSNTRTLEFFNSADYKQVEDLAKNRQPTDLTEPLQLLSDTKKLVEGVVDMMGA 307
            R +PAM+ +    SR Q+LR +P  VG     +A   +P  AALPT+EDY FGTGSK     +            ++S DACP+CSLSERRKRAASSS   +   SP + KRPEVQD+L+ PLPKSSVNP +PVEVV+AVSGELDRMQ LVNKERWGDALTRLRSYPLT LKSPTLGM SVGDVARALGVS SKASDILEASMEAGLTLR+VEDVVFSNTRTLEFFNSADYKQVEDLAK+R PTDLTEPLQLLSDTKKLV GV D+MGA
Sbjct:   37 RSQPAMTVDSPPLSRAQMLRAVPVLVGVAAFHSATPAEPARAALPTTEDYAFGTGSKTSARTSASTQG-------QESKDACPDCSLSERRKRAASSSAVQS---SPSKVKRPEVQDDLSAPLPKSSVNPDNPVEVVRAVSGELDRMQTLVNKERWGDALTRLRSYPLTALKSPTLGMKSVGDVARALGVSNSKASDILEASMEAGLTLRQVEDVVFSNTRTLEFFNSADYKQVEDLAKDRTPTDLTEPLQLLSDTKKLVRGVADLMGA 295
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BLAST of mRNA_P-littoralis_Contig116.37.2 vs. uniprot
Match: D7FWN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWN3_ECTSI)

HSP 1 Score: 297 bits (760), Expect = 3.240e-97
Identity = 177/288 (61.46%), Postives = 191/288 (66.32%), Query Frame = 0 
Query:   29 PLQLQQTGVTATRD-------RPAMSAELS-FSRGQLLRVIPAAVGAVLLGTART-KPVTAALPTSEDYEFGTGSKKQQNRAXXXXXXXXXXPREDSTDACPNCSLSERRKRAASSSEATTDPISPEQTKRPEVQDELAIPLPKSSVNPSSPVEVVKAVSGELDRMQALVNKERWGDALTRLRSYPLTTLKSPTLGMGSVGDVARALGVSTSKASDILEASMEAGLTLREVEDVVFSNTRTLEFFNSADYKQVEDLAKNRQPTDLTEPLQLLSDTKKLVEGVVDMMGA 307
            P  +Q+ G  A R        +PAM+ +    SR QLLR  PA VG     +A   +P  AALPT+EDY FGTGSK                                                     KRPEVQDEL+ PLPKSSVNP +PVEVV+AVSGELDRMQ LV KERWGDALTRLRSYPLT LKSPTLGM SVGDV+RALGVS SKASDILEASMEAGLTLREVEDVVFSNTRTLEFFNSADYKQVEDLAK+R PTDLTEPLQLLSDTKKLV GV D+MGA
Sbjct:   40 PFSVQRVGAFAVRSCARCKRSQPAMTVDSPPLSRAQLLRAFPALVGVAAFHSATAAEPARAALPTTEDYAFGTGSK----------------------------------------------------VKRPEVQDELSAPLPKSSVNPDNPVEVVRAVSGELDRMQTLVKKERWGDALTRLRSYPLTALKSPTLGMKSVGDVSRALGVSNSKASDILEASMEAGLTLREVEDVVFSNTRTLEFFNSADYKQVEDLAKDRTPTDLTEPLQLLSDTKKLVGGVADLMGA 275
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig116.37.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L290_9PHAE1.150e-11471.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWN3_ECTSI3.240e-9761.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig116contigP-littoralis_Contig116:149436..153143 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig116.37.2mRNA_P-littoralis_Contig116.37.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig116 149416..153740 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig116.37.2 ID=prot_P-littoralis_Contig116.37.2|Name=mRNA_P-littoralis_Contig116.37.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=316bp
MTSMAFYSVFAACIVTMHCCVMAFVPAVPLQLQQTGVTATRDRPAMSAEL
SFSRGQLLRVIPAAVGAVLLGTARTKPVTAALPTSEDYEFGTGSKKQQNR
ASTSTTTTATTPREDSTDACPNCSLSERRKRAASSSEATTDPISPEQTKR
PEVQDELAIPLPKSSVNPSSPVEVVKAVSGELDRMQALVNKERWGDALTR
LRSYPLTTLKSPTLGMGSVGDVARALGVSTSKASDILEASMEAGLTLREV
EDVVFSNTRTLEFFNSADYKQVEDLAKNRQPTDLTEPLQLLSDTKKLVEG
VVDMMGARSGGVVAQ*
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