prot_P-littoralis_Contig610.36.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig610.36.1
Unique Nameprot_P-littoralis_Contig610.36.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length559
Homology
BLAST of mRNA_P-littoralis_Contig610.36.1 vs. uniprot
Match: D7FXU2_ECTSI (C3H1-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXU2_ECTSI)

HSP 1 Score: 243 bits (619), Expect = 3.710e-70
Identity = 198/492 (40.24%), Postives = 238/492 (48.37%), Query Frame = 0
Query:  102 MTWVATGSCPYSTRCVFVHDPRVQGREEAWLYAGSHMSSAYHSSDSAFFFPDLRRDPDSQLPKDSFLYDLDPAMSIAQDRADRAVYSMWYSFVSMLTNLEAVKAGDLPSPAKSKLATQHPAPSXXXXSNSTISPCDRGGSTRSFVPSFSTSPKSSSDGSSSSIGGGEEAGHFPLTAPVSCCRNSVATSSGGADSPVFADRSDACSNSSGDSVAAKEHEAAECRLVYGGCPRLQCFVGLSRGVPARPPTPTSPDFFLEGFPADGAPSVFSFASTTPVTADTR-------------SSSAFFGGVRRGMRLP------PPSSSRRYAYGDWGLPPKPTESPTASLPMMNRYPRSSSPT-------LPRDGAFHKVNVTAAAV--------CEARES-PRMVLPGSDCPRAFTESLGRRHYHHQRHTSPTVRTAA--------------RAFPQPDTPRSSEA------TFAAILSEY-EAQLSHLRFSSVPERR 537
            MTWVATGSCPYS+RCVF+HDPRVQGR+EAWLYAGSHMSSAYHSSDSAFFFPDL RDPDS LP+DS LYDLDPAM  A+DRADRAVY+MWYSFVS+LT++E  KA    S AK   A   PAPS    S ST++  DR  S   F   +STSP +               G                               D              H+ AE R+  GGCPRL  FV LSRGVP  P TPTSPD  + GFP + +  V       P +A +R             S+ A  G       +P      PP S R           +PT S ++S  + +    SSS T       LPR    H+  V +  V          AR+S P+MV P     RA ++S+   H H+QRH SP  R                   FPQP   RS          FA  L+E  EA++  LR +  P+RR
Sbjct:    1 MTWVATGSCPYSSRCVFIHDPRVQGRQEAWLYAGSHMSSAYHSSDSAFFFPDLPRDPDSLLPRDSSLYDLDPAMCAAKDRADRAVYNMWYSFVSVLTDIETDKAPPSGSSAKPGAADVFPAPSPSS-SESTLALSDRSSS---FGSDYSTSPTN---------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMD-------------HHQVAERRIACGGCPRLASFVDLSRGVPMGPATPTSPDAEVAGFPFEDSQLVAFSRGDAPGSAASRYRPRSTEEEFSPASTPAAGGAGSPAFPMPADYPSSPPKSCRSGG--------RPTLSRSSSASIADCGASSSSSTAGALPATLPRPSPSHRRPVVSTQVDANGNIVAAVARQSAPQMVAP-----RAVSDSVDCAHQHYQRHCSPPARRVPFKTVPIPPHAAIPRSEFPQPQPRRSXXXXXXXXXAFAKQLAEEAEAEMVWLRLA-CPDRR 446          
BLAST of mRNA_P-littoralis_Contig610.36.1 vs. uniprot
Match: D8LHE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHE0_ECTSI)

HSP 1 Score: 150 bits (380), Expect = 1.450e-35
Identity = 78/192 (40.62%), Postives = 114/192 (59.38%), Query Frame = 0
Query:   43 IISTNLKTELCRNFEKGVCTYGE-RCAFAHGRVELKYRTLREMQNAGRIPDAVKYRCIPCMTWVATGSCPYSTRCVFVHDPRVQGREEAWLYAGSHMSSAYHSSDSA-----------FFFPDLRR---------DPD-------------SQLPKDSFLYDLDPAMSIAQDRADRAVYSMWYSFVSMLTNL 200
            ++S N KTE+CRN+++G C     +CAFAHG  EL+ ++L +M+  GRIP+A K+RC PC+TW+ TG+CPY +RCVF+HDPR++G   A+LY   H  +  HS+ S            F++PD+ R         DP              S LP  S  YD+DP+M  ++D  +RAVY +WY+ VS +T +
Sbjct:    8 LVSVNRKTEICRNWQQGRCVAEAWKCAFAHGTHELRRQSLDQMEYTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRIRGPTAAYLY--KHNGNRSHSTRSGGSVGSPLGRDIFYWPDMPRTDADGNEIMDPSAWMDVAQLMIVGVSSLPTVSANYDMDPSMLHSEDATERAVYQLWYTLVSTITEI 197          
BLAST of mRNA_P-littoralis_Contig610.36.1 vs. uniprot
Match: D7FIR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIR3_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 2.510e-34
Identity = 78/183 (42.62%), Postives = 104/183 (56.83%), Query Frame = 0
Query:   43 IISTNLKTELCRNFEKGVCTYGERCAFAHGRVELKYRTLREMQNAGRIPDAVKYRCIPCMTWVATGSCPYSTRCVFVHDPRVQGR-------EEAWLYAGSHMSSAYHS--------------------SDSAFFFPDLRRDPDS-QLPKDSFLYDLDPAMSIAQDRADRAVYSMWYSFVSML 197
            II  N KTELCRN+E G CT+G+RCAFAHG  ++K++TLR+++  GRI DA KY+   C TWVATG+C Y  RCVF+HD RV+G              A S +SS+  S                    + S  FFPD  RDPDS +LP D   YD+D  + +   R     Y +WYSF++++
Sbjct:   33 IIEHNRKTELCRNYENGSCTFGDRCAFAHGLDDIKHKTLRDLEKEGRIADASKYQACLCQTWVATGTCLYGRRCVFIHDDRVKGTIGLSPRTSTLAKSAASRISSSTGSRGGGSGRGSSPLCPAGEDNDNGSLLFFPDRPRDPDSRELPADEVRYDIDFGVDVNTGRDHSTAYKLWYSFITVM 215          
BLAST of mRNA_P-littoralis_Contig610.36.1 vs. uniprot
Match: A0A836CEW5_9STRA (C3H1-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEW5_9STRA)

HSP 1 Score: 101 bits (252), Expect = 1.650e-22
Identity = 45/72 (62.50%), Postives = 55/72 (76.39%), Query Frame = 0
Query:   43 IISTNLKTELCRNFEKGVCTYGERCAFAHGRVELKYRTLREMQNAGRIPDAVKYRCIPCM--TWVATGSCPY 112
            +I  N KTELCRN++ G C YG +CAFAHG+ EL  +TL EM+ AGRIP+A ++R  PCM  TWVATGSCPY
Sbjct:    4 VIEANRKTELCRNWQNGTCLYGGKCAFAHGQSELTVQTLTEMEKAGRIPNAARFRSNPCMASTWVATGSCPY 75          
BLAST of mRNA_P-littoralis_Contig610.36.1 vs. uniprot
Match: A0A7S2RNI6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RNI6_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 6.500e-19
Identity = 45/90 (50.00%), Postives = 63/90 (70.00%), Query Frame = 0
Query:   45 STNLKTELCRNF--EKGVCTYGERCAFAHGRVELKYRTLREMQNAGRIPDAVKYRCIPCMTWVATGSCPYSTRCVFVHDPRVQGREEAWL 132
            S  +KTELCR++  EKG C +G++C +AHG  ELKY  L ++  AG I D   YR  PC TW+ATG+CP+ +RC  +HDPR++G  ++WL
Sbjct:   69 SAKVKTELCRHYATEKG-CPFGDKCNYAHGEHELKYTKLMDLDRAGLI-DIEIYRTHPCPTWIATGACPFDSRCSGLHDPRIRGNSKSWL 156          
BLAST of mRNA_P-littoralis_Contig610.36.1 vs. uniprot
Match: A0A7S3Q9Y3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q9Y3_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 6.110e-17
Identity = 54/143 (37.76%), Postives = 78/143 (54.55%), Query Frame = 0
Query:   45 STNLKTELCRNFE-KGVCTYGERCAFAHGRVELKYRTLREMQNAGRIPDAVKYRCIPCMTWVATGSCPYSTRCVFVHDPRVQG--REEAWL------------------YAGSHMSSAYHSSDSAFFFPDLRRDPDSQLPKDS 166
            S  +KTELCRNF  +  C +G++C +AHG  ELK   L +++ AG + D   +R  PC+TWVATG+CP+ TRC+ +HDPRV     E AWL                  +    ++SAY+S     + P +R+D    L  D+
Sbjct:  419 SAKVKTELCRNFNTRRGCQFGDKCNYAHGAQELKLTKLMDLERAGLV-DIEIFRTHPCLTWVATGACPFDTRCIGLHDPRVTSDDHEMAWLPHAETMINKVTDGANVDKFYHERLTSAYNSFPLYGYVPLVRKDRGINLEDDA 560          
BLAST of mRNA_P-littoralis_Contig610.36.1 vs. uniprot
Match: A0A7S2XMC7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XMC7_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 6.050e-14
Identity = 38/86 (44.19%), Postives = 53/86 (61.63%), Query Frame = 0
Query:   48 LKTELCRNFEKG-VCTYGERCAFAHGRVELKYRTLREMQNAGRIPDAVKYRCIPCMTWVATGSCPYSTRCVFVHDPRVQGREEAWL 132
            +KT LC  ++ G  C +   C +AHG  ELKY  L  M+NAG + D   +R  PC+TW+ATG+CP+ ++C  +HDPR  G    WL
Sbjct:  308 VKTVLCNYYKTGKACPFRSECLYAHGDDELKYTKLMAMENAGLV-DVETFRTHPCLTWIATGACPFDSKCELLHDPRAAGSIPPWL 392          
BLAST of mRNA_P-littoralis_Contig610.36.1 vs. uniprot
Match: A0A6H5KEG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEG2_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 1.850e-10
Identity = 40/99 (40.40%), Postives = 59/99 (59.60%), Query Frame = 0
Query:  115 RCVFVHDPRVQGREEAWLYAGSHMSSAYHSSDSA-----------FFFPDL-RRDPD-SQLPKDSFLYDLDPAMSIAQDRADRAVYSMWYSFVSMLTNL 200
            RCVF+HDPR++G   A+LY  +H     HS+ S            F++PD+ R D D ++LP     YD+DP+M  ++D  +RAVY +WYS VS +T +
Sbjct:   20 RCVFIHDPRIRGPTAAYLY--NHHGKRSHSARSGGSVGSPLGRDIFYWPDMPRTDADGNELPTVLVNYDMDPSMLHSEDATERAVYQLWYSLVSTITEI 116          
BLAST of mRNA_P-littoralis_Contig610.36.1 vs. uniprot
Match: A0A7S4MR33_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MR33_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 7.530e-8
Identity = 34/86 (39.53%), Postives = 45/86 (52.33%), Query Frame = 0
Query:   48 LKTELCRNFEKGV-CTYGERCAFAHGRVELKYRTLREMQNAGRIPDAVKYRCIPCMTWVATGSCPYSTRCVFVHDPRVQGREEAWL 132
            +KTELC  F KG  C +G+RC +AHG  EL+++ L +M+ AG I D   YR  P                  VHDPR  G ++ WL
Sbjct:   71 IKTELCLYFSKGEDCPFGDRCNYAHGYEELRFKKLIDMERAGLIEDVDTYRTHPXXXXXXXXXXXXXXXXXSVHDPRCAGADKCWL 156          
BLAST of mRNA_P-littoralis_Contig610.36.1 vs. uniprot
Match: A0A7S4IRQ2_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IRQ2_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 8.660e-8
Identity = 34/86 (39.53%), Postives = 45/86 (52.33%), Query Frame = 0
Query:   48 LKTELCRNFEKGV-CTYGERCAFAHGRVELKYRTLREMQNAGRIPDAVKYRCIPCMTWVATGSCPYSTRCVFVHDPRVQGREEAWL 132
            +KTELC  F KG  C +G+RC +AHG  EL+++ L +M+ AG I D   YR  P                  VHDPR  G ++ WL
Sbjct:   71 IKTELCLYFSKGEDCPFGDRCNYAHGYEELRFKKLIDMERAGLIEDVDTYRTHPXXXXXXXXXXXXXXXXXSVHDPRCAGADKCWL 156          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig610.36.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7FXU2_ECTSI3.710e-7040.24C3H1-type domain-containing protein n=2 Tax=Ectoca... [more]
D8LHE0_ECTSI1.450e-3540.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FIR3_ECTSI2.510e-3442.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CEW5_9STRA1.650e-2262.50C3H1-type domain-containing protein n=1 Tax=Tribon... [more]
A0A7S2RNI6_9STRA6.500e-1950.00Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S3Q9Y3_9STRA6.110e-1737.76Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2XMC7_9STRA6.050e-1444.19Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A6H5KEG2_9PHAE1.850e-1040.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4MR33_9STRA7.530e-839.53Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S4IRQ2_9STRA8.660e-839.53Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 95..122
e-value: 2.1E-4
score: 30.6
coord: 47..73
e-value: 7.1E-8
score: 42.2
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 100..122
e-value: 1.6E-5
score: 24.7
coord: 49..73
e-value: 2.9E-9
score: 36.6
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 95..123
score: 10.859059
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 47..74
score: 16.051231
NoneNo IPR availableGENE3D4.10.1000.10coord: 42..78
e-value: 4.5E-12
score: 47.1
coord: 92..123
e-value: 1.8E-5
score: 26.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..264
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 211..269
NoneNo IPR availablePANTHERPTHR12547:SF140PROTEIN TIS11coord: 26..210
IPR045877RNA-binding protein ZFP36-likePANTHERPTHR12547CCCH ZINC FINGER/TIS11-RELATEDcoord: 26..210
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 46..77
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 93..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig610contigP-littoralis_Contig610:138414..147081 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig610.36.1mRNA_P-littoralis_Contig610.36.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig610 137905..147133 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig610.36.1 ID=prot_P-littoralis_Contig610.36.1|Name=mRNA_P-littoralis_Contig610.36.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=559bp
MMYSSAGSCASNGSNGMLVSRTAWPTRQGQQQQMPGRRRTQTIISTNLKT
ELCRNFEKGVCTYGERCAFAHGRVELKYRTLREMQNAGRIPDAVKYRCIP
CMTWVATGSCPYSTRCVFVHDPRVQGREEAWLYAGSHMSSAYHSSDSAFF
FPDLRRDPDSQLPKDSFLYDLDPAMSIAQDRADRAVYSMWYSFVSMLTNL
EAVKAGDLPSPAKSKLATQHPAPSPSSSSNSTISPCDRGGSTRSFVPSFS
TSPKSSSDGSSSSIGGGEEAGHFPLTAPVSCCRNSVATSSGGADSPVFAD
RSDACSNSSGDSVAAKEHEAAECRLVYGGCPRLQCFVGLSRGVPARPPTP
TSPDFFLEGFPADGAPSVFSFASTTPVTADTRSSSAFFGGVRRGMRLPPP
SSSRRYAYGDWGLPPKPTESPTASLPMMNRYPRSSSPTLPRDGAFHKVNV
TAAAVCEARESPRMVLPGSDCPRAFTESLGRRHYHHQRHTSPTVRTAARA
FPQPDTPRSSEATFAAILSEYEAQLSHLRFSSVPERRGGGGSGAFRASTE
NGYGLCIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
IPR045877ZFP36-like
IPR036855Znf_CCCH_sf