mRNA_P-littoralis_Contig61.111.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig61.111.2 vs. uniprot
Match: D8LMS0_ECTSI (SNF2-related domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMS0_ECTSI) HSP 1 Score: 1014 bits (2623), Expect = 0.000e+0 Identity = 733/1165 (62.92%), Postives = 786/1165 (67.47%), Query Frame = 1
Query: 307 MEFTCMWSKDAQQKKRKRWTDGVARFFPSTGVLSIWDQDASAKVSSTRLKPEEAAAVLQEDGDEARVG-GISLQIMAAIQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGKEGIASRLGGLAAG---GSGFRRGKLGAARRSLQHATGPLASGSSSSVSAGAVARTADXXXXXXXXXXXXXXXXXGAGRGIGGARRFHAPRSFSSGTAAQATSNANPPASSSARRETGSCGSAGPAEAGEGPSDFSGASHGXXXXXXXXXXXXXXXXXXVAKTAPGGFSGNHKRGDTHAAGAAASPEGLVLEWTAGDPPRPLLAGASLARRLHPHQREGLKVLWECLAGRGGYEGRGAILADEMGLGKTATAIALCTCVLRHRRAECLKAVVVCPSSLVRNWANEFKKWCPLGANAVPVDQAGAAAAQLVADFKIGAPSAYPILVISYELYRNHGKVINATSGLGLLIADEGHRLKNSSETKTTRALKACPAVMRLVLTGTPMQNDLDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDADEDVADFSTERTRELAQITGKFVLRRTKDVIRGSLPPASEVVIFCRPSARQLSLYESCIASSADARSLLYGDAERGGGXXXXXXXXXXXXQLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPVSLQGVLPLISTLRRLCNHPDLVAGTDGVVASGGGGLGGESNVEDARDDTLGELR---GNGGGKENSRSTV---TASRAAFKRPWKVPRSSGGVVAAA--------------------------------------------AAMVEPRYETEASGKLLVLEALLKAVRREFPCDKVVVTSNFTSALDVLEKLAERNAWGFLRLDGGTPTNSRQNLVDRFNKAPPENAFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKKVWMYRLLSTGTLEESIFQRQIFKGALYDLIQDSNEASGAHSSSSTGAVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRGFSQEELKELFVLKTETTSDTYDKLRXXXXXXXXXXXXXXXXXXAPEGNSRYEQTTAKEPGEERGEGTGQEGDGVIGAALTPVGGE---WKDYLGPSEVLDKALRLALLEETTGT 3630
MEFTC+WSKDAQQKKRKRWTDG+ARF P+TGVLSIWDQDASAKVSSTRLKP+EA+AVLQEDGDE+R + + + GK G S L AA G+G R G +G ++ T L G G + RT GAGRG+GGARRFHAPRS SG AA A AN S E G + G S GXXXXXXXXXXXXXXXXXX G S P+GLVLEWTAGDPP+P++AGASLARRLHPHQREGLK+LWECLAGRGGYEGRGAILADEMGLGKTATAIALCTCVLRHRRAEC KAVV+CPSSLV NWANEF+KWCPLG AV VDQAGAAAAQLV+DFKIGA + YPILVISYELYRNHGKVINAT GLGLLIADEGHRLKNS+ETKTTRALKACPAVMRLVLTGTPMQNDLDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDA+ED A+ S ERTREL ++T KFVLR+TKDVIRGSLP A EVV+FCRPSARQLSLYESCIA SA ARSLLYGD GG XXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXX R + LQGVLPLIS LRRLCNHPDLV D A GE + E GE R G+G GKEN + TA RA K WKVPR+SG A AA+ P YET ASGK+ VLEALLKAVRRE+P DKVVV SNFTSALDVLE LAERNAWGFLRLDGGT TN+RQNLVDRFN+A PE+ FLF+LS KAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTK+V MYRLLSTGTLEESIFQRQIFKGALYDLI DSN+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RGFSQEELKELFVL+TET SDTYDKLR A EG RY++ T + RG+G G G AA V E W+DY GPS V+DKALRLALLEE TGT
Sbjct: 1 MEFTCLWSKDAQQKKRKRWTDGIARFSPATGVLSIWDQDASAKVSSTRLKPDEASAVLQEDGDESRSTLDAASETASTTGGGSAAASGKVTGTPVRLATASGVKLGPSKKLGATSMLGKAGPRSLLSAPAAAAPLGNGIRSGVVGPVAGTM---TSVLGGG-------GGIKRTG----------------LGGAGRGVGGARRFHAPRS--SGAAAVAA-GANE--RESKNHELGGSEKSLARRVSPGTGGSFSRSAGXXXXXXXXXXXXXXXXXXXXXXXASGLS----------------PDGLVLEWTAGDPPQPVMAGASLARRLHPHQREGLKMLWECLAGRGGYEGRGAILADEMGLGKTATAIALCTCVLRHRRAECRKAVVICPSSLVGNWANEFRKWCPLGGGAVAVDQAGAAAAQLVSDFKIGAAARYPILVISYELYRNHGKVINATEGLGLLIADEGHRLKNSAETKTTRALKACPAVMRLVLTGTPMQNDLDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDANEDAAELSAERTRELGEMTEKFVLRKTKDVIRGSLPAALEVVVFCRPSARQLSLYESCIAGSAGARSLLYGD----GGDAXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXRTQQGQRRRRIGLQGVLPLISKLRRLCNHPDLVE-EDSSAA-------GELSAE-------GEERQGGGSGSGKENRNTREEHSTAGRAGAKGAWKVPRASGAAAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAL--PLYETGASGKMTVLEALLKAVRREYPGDKVVVASNFTSALDVLETLAERNAWGFLRLDGGTTTNARQNLVDRFNRASPEDLFLFYLSTKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKEVSMYRLLSTGTLEESIFQRQIFKGALYDLIHDSND------------------DPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKSGRGFSQEELKELFVLRTETRSDTYDKLRRGRAAATPTAAGAAS---AHEGG-RYQEVTPEREAGARGDGEEDGGRGATAAAAPVVAVEEEAWEDYGGPSAVVDKALRLALLEEPTGT 1070
BLAST of mRNA_P-littoralis_Contig61.111.2 vs. uniprot
Match: A0A6H5JTI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTI7_9PHAE) HSP 1 Score: 969 bits (2505), Expect = 0.000e+0 Identity = 728/1178 (61.80%), Postives = 787/1178 (66.81%), Query Frame = 1
Query: 403 LSIWDQDASAKVSSTRLKPEEAAAVLQEDGDEARVGGISLQIMAAIQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGK---------EGIASRLGGLAAGGSGFRRGKLGA-ARRSLQHATGPLASGSSSSVSAGAVARTADXXXXXXXXXXXXXXXXXGAGRGIGGARRFHAPRSFSSGTAAQATSNANPPASSSARRETGSCGSAGPAEAGEGPSDFS---GASHGXXXXXXXXXXXXXXXXXXVAKTAPGGFSGNHKRGDTHAAGAAASPEGLVLEWTAGDPPRPLLAGASLARRLHPHQREGLKVLWECLAGRGGYEGRGAILADEMGLGKTATAIALCTCVLRHRRAECLKAVVVCPSSLVRNWANEFKKWCPLGANAVPVDQAGAAAAQLVADFKIGAPSAYPILVISYELYRNHGKVINATSGLGLLIADEGHRLKNSSETKTTRALKACPAVMRLVLTGTPMQNDLDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDADEDVADFSTERTRELAQITGKFVLRRTKDVIRGSLPPASEVVIFCRPSARQLSLYESCIASSADARSLLYGDAERGGGXXXXXXXXXXXXQLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPVSLQGVLPLISTLRRLCNHPDLVAGTDGVVASGGGGLGGESNVEDARDDTLGELRGNGGGKENSRSTV---TASRAAFKRPWKVPRSSGGVVA---------------------AAAAMVEPRYETEASGKLLVLEALLKAVRREFPCDKVVVTSNFTSALDVLEKLAERNAWGFLRLDGGTPTNSRQNLVDRFNKAPPENAFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKKVWMYRLLSTGTLEESIFQRQIFKGALYDLIQDSNEASGAHSSSSTGAVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRGFSQEELKELFVLKTETTSDTYDKLRXXXXXXXXXXXXXXXXXXAPEGNSRYEQTTAKEPGEERGEGTGQEGDGVIGAALTPVGGE---WKDYLGPSEVLDKALRLALLEETTGTDAAAFVGDRGGSANNKVATAASSAVTFVREVPRGGEPKXXXXXXXSGAEAASRSPFAPRENA 3816
L++ DAS KVSSTRLKP+EA+ VLQEDG+E RVGGIS+QIMA + QXXXXXXXXXXXXXXXXXXXXXXXXXXX SGK E +LG G+ GK+G + S+ A PL +G S A T XXXXXX GAGRG+GGARRFHAPRS SG AA + AN S + + A G G S FS GA HG XXXXXXXXXXXX SPEGLVLEWTAGDPP+P++AGASLARRL+PHQREGLK+LWECLAGRGGYEGRGAILADEMGLGKTATAIALC CVLRHRRAEC KAVVVCPSSLVRNWANE + P G AV VDQAGAAAAQLV+DFKIGA + YPILVISYELYRNHGKVINAT GLGLLIADEGHRLKN++ETKTTRALKACPAVMRLVLTGTPMQNDLDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDA+ED A+ STERTREL ++T KFVLRRTKDVIRGSLP A EVV+FCRPS RQLSLY+SCIA SA ARSLLYGD G XXXXXXXXXXXXXXXXXXXXXXXXXXRP+ LQGVLPLIS LRRLCNHPDLV + A+G + D ++ G G+G GKENS + TA RA K WKVPR+S AA A P YETEASGK+ VLEALLKAVRRE+P DKVVV SNFTSALDVLE LAERN+WGFLRLDGGT TN RQNLVDRFN+A PE+ FLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTK+V MYRLLSTGTLEESIFQRQIFKGALYDLI DSN+ XXXXXXXXXXXXXXXXXXXXXXX RGFSQEELKELFVLK ET SDTYDKLR RY++ T + RG+G G AA V E W+DY+GPS V+DKALRLALLEE TGT + G + VTFVREV RGG P+ XXXX G AS S FA E A
Sbjct: 3 LTLPAADASVKVSSTRLKPDEASVVLQEDGNETRVGGISIQIMADVGGQXXXXXXXXXXXXXXXXXXXXXXXXXXXS------SGKVTRTPVRPAEASGVKLGPRKRLGATSMLGKVGPRSLLSVPAAAVPLGNGIRSGAVGPAAGTTTSVLGXXXXXXGIKRTGLGGAGRGVGGARRFHAPRS--SGAAAVVAAGANERESKNHKLGGSEKSLARRVSPGRGGS-FSRSAGAGHGRDSGGGXXXXXXXXXXXXXXXXXXXXXG--------------LSPEGLVLEWTAGDPPQPVIAGASLARRLYPHQREGLKMLWECLAGRGGYEGRGAILADEMGLGKTATAIALCMCVLRHRRAECPKAVVVCPSSLVRNWANEVQSRGP-GGGAVAVDQAGAAAAQLVSDFKIGAAARYPILVISYELYRNHGKVINATEGLGLLIADEGHRLKNAAETKTTRALKACPAVMRLVLTGTPMQNDLDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDANEDAAELSTERTRELGEMTEKFVLRRTKDVIRGSLPAALEVVVFCRPSTRQLSLYQSCIAGSAGARSLLYGDG--------------------GDADSDDAERGXXXXXXXXXXXXXXXXXXXXXXXXXXRPIGLQGVLPLISKLRRLCNHPDLVE--EDTSAAG--------ELSDEGEERQGG--GSGSGKENSNTPEEHSTAGRAGAKGAWKVPRASEAAAXXXXXXXXXXXXXXXXXXXXXXAAEAAALPLYETEASGKVTVLEALLKAVRREYPGDKVVVASNFTSALDVLETLAERNSWGFLRLDGGTTTNERQNLVDRFNRASPEDLFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKEVCMYRLLSTGTLEESIFQRQIFKGALYDLIHDSNDDPSKEXXXXXXXX-----------------------XXXXXXXXXXXXXXXXXXXXXXXGKSGRGFSQEELKELFVLKAETRSDTYDKLRRGRAAATPRAAGAAGVREG----GRYQEVTLEREVGARGDGEEDGWQGPTAAAAPVVDVEEQAWEDYVGPSAVVDKALRLALLEEATGTPSQV------GGSXXXXXXXXXXVVTFVREVKRGGRPEQQRXXXXVGTGGASHSQFAAFEGA 1091
BLAST of mRNA_P-littoralis_Contig61.111.2 vs. uniprot
Match: UPI001889348C (DNA repair and recombination protein RAD54B-like n=2 Tax=Rhipicephalus microplus TaxID=6941 RepID=UPI001889348C) HSP 1 Score: 355 bits (911), Expect = 1.720e-100 Identity = 243/620 (39.19%), Postives = 317/620 (51.13%), Query Frame = 1
Query: 1267 SLARRLHPHQREGLKVLWECLAGRGGYEGRGAILADEMGLGKTATAIALCTCVLR---HRRAECL-KAVVVCPSSLVRNWANEFKKWCP-LGANAVPVDQAGAAAAQLVADFKIGAPSAYPILVISYELYRNHGKVINATSGLGLLIADEGHRLKNSSETKTTRALKACPAVMRLVLTGTPMQNDLDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDADEDVADFSTERTRELAQITGKFVLRRTKDVIRGSLPPASEVVIFCRPSARQLSLYESCIASS---ADARSLLYGDAERGGGXXXXXXXXXXXXQLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPVSLQGVLPLISTLRRLCNHPDLVAGTDGVVASGGGGLGGESNVEDARDDTLGELRGNGGGKENSRSTVTASRAAFKRPWKVPRSSGGVVAAAAAMVEPRYETEASGKLLVLEALLKAVRREFPCDKVVVTSNFTSALDVLEKLAERNAWGFLRLDGGTPTNSRQNLVDRFNKAPPENAFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKKVWMYRLLSTGTLEESIFQRQIFKGALYDLIQDSNE 3102
SL R L PHQREG+ L+EC+ ++G GAILADEMGLGKT I L +LR + CL K ++V PSSLV+NW EFKKW P VDQ D + PS YP+L++SYE+Y ++ + LLI DE HRLKN++ KTT +L+ + R++LTGTP+QNDL EFFA+ DF NPG+LG SFR Y PI + A E+ + R EL Q T F+LRRT+DVI+ LP E V+FCRP QL+LY++ + +S A S L DA L I LR+LCNHP LVA S +D+ +G + + +S P + SG SGKL+VL A+L ++ P +++V+ SNFT LD+LE + + + FLRLDG T + R LV+RFN +P N F+F LS KAGGVGLNLVGA+RIVL+D DWNPA D QAMARVWR GQ++ V +YRLL+TGT+EE IFQRQ+ K L + DS +
Sbjct: 306 SLTRCLRPHQREGVVFLYECIMQMRAFDGCGAILADEMGLGKTLQCITLIWTLLRQGPYGGQPCLRKVIIVTPSSLVKNWVKEFKKWLPNRNLRVYHVDQNNKI------DIFLNDPSMYPVLILSYEMYMRASDRLSRIN-FDLLICDEAHRLKNAN-IKTTESLQNLGTLRRILLTGTPVQNDLQEFFALVDFCNPGILGKSSSFRRIYEEPILRSQLPGATEEEKELGPARANELMQTTSPFILRRTQDVIQSYLPGKVECVVFCRPQPLQLALYQNMLETSMVRACLSSYLSTDANCH--------------------------------------------------------------LACILALRKLCNHPLLVA----------------SQEFADKDEDVGLAALHAEARRGLQSEFD--------PTMMELESG------------------SGKLVVLAAMLHSLWTSQPRERIVLVSNFTKTLDILEDICMQKGYPFLRLDGSTSSTQRLELVERFN-SPHSNCFVFLLSCKAGGVGLNLVGASRIVLYDVDWNPANDLQAMARVWRDGQSRHVSIYRLLTTGTIEEKIFQRQVTKQELSGAVLDSKK 812
BLAST of mRNA_P-littoralis_Contig61.111.2 vs. uniprot
Match: A0A8D2Q142_VARKO (RAD54 homolog B n=2 Tax=Varanus komodoensis TaxID=61221 RepID=A0A8D2Q142_VARKO) HSP 1 Score: 352 bits (902), Expect = 3.080e-100 Identity = 238/616 (38.64%), Postives = 321/616 (52.11%), Query Frame = 1
Query: 1270 LARRLHPHQREGLKVLWECLAGRGGYEGRGAILADEMGLGKTATAIALCTCVLRHR----RAECLKAVVVCPSSLVRNWANEFKKWCPLGANAVPV---DQAGAAAAQLVADFKIGAPSAYPILVISYELYRNHGKVINATSGLGLLIADEGHRLKNSSETKTTRALKACPAVMRLVLTGTPMQNDLDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDADEDVADFSTERTRELAQITGKFVLRRTKDVIRGSLPPASEVVIFCRPSARQLSLYESCIASSADARSLLYGDAERGGGXXXXXXXXXXXXQLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPVSLQGVLPLISTLRRLCNHPDLVAGTDGVVASGGGGLGGESNVEDARDDTLGELRGNGGGKENSRSTVTASRAAFKRPWKVPRSSGGVVAAAAAMVEPRYETEASGKLLVLEALLKAVRREFPCDKVVVTSNFTSALDVLEKLAERNAWGFLRLDGGTPTNSRQNLVDRFN-KAPPENAFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKKVWMYRLLSTGTLEESIFQRQIFKGALYDLIQD 3093
+ L PHQREG+ L+EC+ G GAILADEMGLGKT IAL +LR + +A++V P SLV+NW EF+KW LG + V DQ V +F I +P +P+L+ISYE++ I T GL++ DEGHRLKNSS KTT AL + P R++L+GTP+QNDL EF+A+ +FVNPG+LGSL ++R Y PI+ + + A ++ + R ELA++TG F+LRRT+DVI LPP E ++FCRP+A QL LY ++S +S L G E L I L++LCNHP L+ T +E D T G E + + P S + SGKL VL LL A+R P ++VV+ SN+T LD+L+++ +R+ + + RLDG TP + RQ +VD FN K P AF+F LS+KAGGVGLNL+GA+ ++L+D DWNPATD QAMARVWR GQ + V +YRLL+TGT+EE I+QRQI K L + D
Sbjct: 230 IVTHLRPHQREGILFLYECVMGMRANMKFGAILADEMGLGKTLQCIALTWTLLRQGPYGGKPIIKQALIVAPGSLVKNWGKEFQKW--LGNERLKVFLVDQD-----HKVEEF-INSPL-HPVLIISYEMFLRSLDQIQKTE-FGLVVCDEGHRLKNSS-IKTTTALASLPCERRVILSGTPVQNDLQEFYALIEFVNPGILGSLSAYRKVYEEPIRRSREPSATKEEIELGERRAEELARLTGLFILRRTQDVINKFLPPKRESILFCRPTALQLDLYRRLLSSQV-VKSCLQGSLEN------------------------------------------------------------SPHLICIGALKKLCNHPCLLFKTI---------------LEKGHDPT---------GDEQVKQNLCEGLLDIFSQGCPPAS---------------FSESDSGKLKVLVQLLAAIREFSPSERVVLVSNYTQTLDILQEVCKRSGYCYTRLDGNTPVSQRQQIVDAFNGKFCP--AFIFLLSSKAGGVGLNLIGASHLILYDIDWNPATDIQAMARVWRDGQKRTVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVD 732
BLAST of mRNA_P-littoralis_Contig61.111.2 vs. uniprot
Match: UPI001895261B (DNA repair and recombination protein RAD54B-like n=1 Tax=Rhipicephalus sanguineus TaxID=34632 RepID=UPI001895261B) HSP 1 Score: 354 bits (908), Expect = 4.370e-100 Identity = 245/629 (38.95%), Postives = 320/629 (50.87%), Query Frame = 1
Query: 1267 SLARRLHPHQREGLKVLWECLAGRGGYEGRGAILADEMGLGKTATAIALCTCVLR---HRRAECL-KAVVVCPSSLVRNWANEFKKWCP-LGANAVPVDQAGAAAAQLVADFKIGAPSAYPILVISYELYRNHGKVINATSGLG--LLIADEGHRLKNSSETKTTRALKACPAVMRLVLTGTPMQNDLDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDADEDVADFSTERTRELAQITGKFVLRRTKDVIRGSLPPASEVVIFCRPSARQLSLYESCIASS---ADARSLLYGDAERGGGXXXXXXXXXXXXQLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPVSLQGVLPLISTLRRLCNHPDLVAGTDGVVASGGGGLGGESNVEDARDDTLGELRGNGGGKENSRSTVTASRAAFKR-------PWKVPRSSGGVVAAAAAMVEPRYETEASGKLLVLEALLKAVRREFPCDKVVVTSNFTSALDVLEKLAERNAWGFLRLDGGTPTNSRQNLVDRFNKAPPENAFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKKVWMYRLLSTGTLEESIFQRQIFKGALYDLIQDSNE 3102
SLAR L PHQREG+ L+EC+ ++G GAILADEMGLGKT I L +LR + CL K ++V PSSLV+NW EFKKW VDQ D + PS YP+L++SYE+Y ++ N+ +G+ LLI DE HRLKN++ KTT +L + R++LTGTP+QNDL EFFA+ DF NPG+LG SFR Y PI + A E+ + R EL Q T F+LRRT+DVI+ LP E V+FCRP QL+LY++ + ++ A S L DA L I LR+LCNHP LVA S +DD G + A A +R P + SG SGKL+VL A+L ++ P +++V+ SNFT LD+LE + + + FLRLDG T + R LV+RFN +P N F+F LS KAGGVGLNLVGA+RIVL+D DWNPA D QAMARVWR GQ++ V +YRLL+TGT+EE IFQRQ+ K L + ++ +
Sbjct: 306 SLARCLRPHQREGVVFLYECIMQMRAFDGCGAILADEMGLGKTLQCITLIWTLLRQGPYGGQPCLRKIIIVTPSSLVKNWVKEFKKWLQNRNLRVYHVDQNNKI------DVFLNQPSTYPVLILSYEMYM---RISNSLAGINFDLLICDEAHRLKNAN-IKTTESLHNLGTLRRILLTGTPVQNDLQEFFALVDFCNPGILGKSSSFRRIYEEPILRSQLPGATEEEKELGQARANELMQATSPFILRRTQDVIQSYLPGKVECVVFCRPQPLQLALYQNMLKTNMVRACLSSYLSTDANCH--------------------------------------------------------------LACILALRKLCNHPLLVA----------------SQEFADKDDDAG---------------LAALHAEARRVLPPEFNPMTMDLESG------------------SGKLMVLAAMLHSLWTSLPRERIVLVSNFTKTLDILEDVCMQKGYPFLRLDGSTSSTQRLELVERFN-SPHSNCFVFLLSCKAGGVGLNLVGASRIVLYDVDWNPANDLQAMARVWRDGQSRHVSIYRLLTTGTIEEKIFQRQVTKQELSGAVLENKK 812
BLAST of mRNA_P-littoralis_Contig61.111.2 vs. uniprot
Match: A0A8C9W359_SCLFO (RAD54 homolog B n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9W359_SCLFO) HSP 1 Score: 344 bits (883), Expect = 8.140e-100 Identity = 245/644 (38.04%), Postives = 325/644 (50.47%), Query Frame = 1
Query: 1222 EWT---AGDPPRPLLAGASLARRLHPHQREGLKVLWECLAGRGGYEGRGAILADEMGLGKTATAIALCTCVLRH----RRAECLKAVVVCPSSLVRNWANEFKKWCPLGANAV---PVDQAGAAAAQLVADFKIGAPSAYPILVISYELYRNHGKVINATSGLGLLIADEGHRLKNSSETKTTRALKACPAVMRLVLTGTPMQNDLDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDADEDVADFSTERTRELAQITGKFVLRRTKDVIRGSLPPASEVVIFCRPSARQLSLYESCIASSADARSLLYGDAERGGGXXXXXXXXXXXXQLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPVSLQGVLPLISTLRRLCNHPDLVAGTDGVVASGGGGLGGESNVEDARDDTLGELRGNGGGKENSRSTVTASRAAFKRPWKVPRSSGGVVAAAAAMVEPRYETEASGKLLVLEALLKAVRREFPCDKVVVTSNFTSALDVLEKLAERNAWGFLRLDGGTPTNSRQNLVDRFNKAPPENAFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKKVWMYRLLSTGTLEESIFQRQIFKGALYDLIQDSNEASGAHSS 3123
+WT G P ++ L RL PHQREG+ L+EC+ G GAILADEMGLGKT I L +LR +A+VV P SLV+NWA EF KW LG + VDQ V +F + +P + +LVISYE+ + ++ GL++ DEGHRLKNS+ KT+ AL + R++LTGTP+QNDL EF+A+ +FVNPG+LGS ++R Y PI + A E+ ER EL +TG F+LRRT+++I LPP E ++FCRPS QL +Y + R+ L G E L I L++LCNHP L+ T V G +S +D + TL + + + S+GG + T SGKLLVL LL AV+ P D+VV+ SN+T LD+L+ L + F RLDG TP RQ LVDRFN + F+F LS+KAGGVGLNLVGA+ ++L+D DWNPA D QAMARVWR GQ K V +YRLL+TGT+EE I+QRQ+ K L + DS++ + HSS
Sbjct: 9 QWTFNQGGLPVVDVVVDPHLTSRLRPHQREGVLFLYECVMGMRATRRHGAILADEMGLGKTLQCITLVWTLLRQGPYGSHPVARRALVVTPGSLVKNWAAEFNKW--LGKERIGVFTVDQD-----HRVEEF-LSSPR-FTVLVISYEMLLRSVEQVSRVE-FGLVVCDEGHRLKNSN-IKTSTALSSLACNRRIILTGTPVQNDLQEFYAIIEFVNPGVLGSPSAYRKVYEEPIVRSRQPSATEEEKRLGEERAAELNCLTGLFILRRTQEIINRYLPPKLEWIVFCRPSQLQLEVYRKLLTHRV-VRACLQGALEN------------------------------------------------------------SPHLVCIGALKKLCNHPSLLYAT--VQEKG------DSIAQDPSESTLYQ--------------------GLEELFPEGYSAGG------------FHTAHSGKLLVLCDLLAAVKEFSPSDRVVLVSNYTQTLDLLQDLCGHLGYSFCRLDGQTPVAQRQRLVDRFNNRYSTD-FVFLLSSKAGGVGLNLVGASHLILYDIDWNPANDIQAMARVWRDGQRKTVHIYRLLTTGTIEEKIYQRQVSKQGLSGAVVDSSKRA-EHSS 538
BLAST of mRNA_P-littoralis_Contig61.111.2 vs. uniprot
Match: UPI001899AA45 (DNA repair and recombination protein RAD54B-like isoform X1 n=2 Tax=Dermacentor silvarum TaxID=543639 RepID=UPI001899AA45) HSP 1 Score: 352 bits (903), Expect = 2.070e-99 Identity = 245/621 (39.45%), Postives = 313/621 (50.40%), Query Frame = 1
Query: 1267 SLARRLHPHQREGLKVLWECLAGRGGYEGRGAILADEMGLGKTATAIALCTCVLRHR----RAECLKAVVVCPSSLVRNWANEFKKWCP-LGANAVPVDQAGAAAAQLVADFKIGAPSAYPILVISYELYRNHGKVINATSGLGLLIADEGHRLKNSSETKTTRALKACPAVMRLVLTGTPMQNDLDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDADEDVADFSTERTRELAQITGKFVLRRTKDVIRGSLPPASEVVIFCRPSARQLSLYESCIASS---ADARSLLYGDAERGGGXXXXXXXXXXXXQLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPVSLQGVLPLISTLRRLCNHPDLVAGTDGVVASGGGGLGGESNVEDARDDTLGELRGNGGGKENSRSTVTASRAAFKRPWKVPRSSGGVVAAAAAMVEPRYETEA-SGKLLVLEALLKAVRREFPCDKVVVTSNFTSALDVLEKLAERNAWGFLRLDGGTPTNSRQNLVDRFNKAPPENAFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKKVWMYRLLSTGTLEESIFQRQIFKGALYDLIQDSNE 3102
SLAR L PHQREGL L+EC+ ++G GAILADEMGLGKT IAL +LR + K ++V PSSLV+NW EFKKW VDQ D + PS YP+L++SYE+Y + A+ LLI DE HRLKN++ KTT +L + R++LTGTP+QNDL EFFA+ DF NPG+LG SFR Y PI + A E+ + R EL Q+T F+LRRT+DVI+ LP E V+FCRP QL LY++ + ++ A + L DA L I LR+LCNHP LVA D EDA TL A +R S + EA SGKL VL A+L ++ P +++V+ SNFT LD+LE + + + FLRLDG T + R LV+RFN +P N F+F LS KAGGVGLNLVGA+RIVL+D DWNPA D QAMARVWR GQ++ V +YRLL+TGT+EE IFQRQ+ K L + D+ +
Sbjct: 305 SLARCLRPHQREGLVFLYECIMQMRAFDGCGAILADEMGLGKTLQCIALIWTLLRQGPYGGQPFLRKIIIVTPSSLVKNWVKEFKKWLQNRNLRVYHVDQNNKI------DVFLNQPSIYPVLILSYEMYMRVSNSL-ASINFDLLICDEAHRLKNAN-IKTTESLYNLGTLRRILLTGTPVQNDLQEFFALVDFCNPGILGKSASFRRIYEEPILRSQLPGATEEEKELGQARANELMQVTAPFILRRTQDVIQSYLPGKVECVVFCRPQPLQLMLYQNLLDTNMVRACLSNYLSTDANC--------------------------------------------------------------TLACILALRKLCNHPLLVASQDF-----------SDKDEDAGSATL--------------------HAEARRGLNSELDS------------MMMDLEAGSGKLRVLAAMLHSLWTSLPRERIVLVSNFTKTLDILEDVCTQKEYPFLRLDGSTSSMQRLELVERFN-SPHSNCFVFLLSCKAGGVGLNLVGASRIVLYDVDWNPANDLQAMARVWRDGQSRHVSIYRLLTTGTIEEKIFQRQVTKQELSGAVLDNKK 811
BLAST of mRNA_P-littoralis_Contig61.111.2 vs. uniprot
Match: R7QM18_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QM18_CHOCR) HSP 1 Score: 352 bits (903), Expect = 4.630e-99 Identity = 245/632 (38.77%), Postives = 325/632 (51.42%), Query Frame = 1
Query: 1249 PLLAGASLARRLHPHQREGLKVLWECLAG---RGGYEGRGAILADEMGLGKTATAIALCTCVLRHR---RAECLKAVVVCPSSLVRNWANEFKKWCPLGANAV-PVDQAGAAAA----QLVADFKIGAPSAYPILVISYELYRNHGKVINATSGLGLLIADEGHRLKNSSETKTTRALKACPAVMRLVLTGTPMQNDLDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDADEDVADFSTERTRELAQITGKFVLRRTKDVIRGSLPPASEVVIFCRPSARQLSLYESCIASSADARSLLYGDAERGGGXXXXXXXXXXXXQLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPVSLQGVLPLISTLRRLCNHPDLVAGTDGVVASGGGGLGGESNVEDARDDTLGELRGNGGGKENSRSTVTASRAAFKRPWKVPRSSGGVVAAAAAMVEPRYETEASGKLLVLEALLKAVRREFPCDKVVVTSNFTSALDVLEKLAERNAWGFLRLDGGTPTNSRQNLVDRFNKAPPENAFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKKVWMYRLLSTGTLEESIFQRQIFKGALYDLIQDSNEASG 3111
P++ LA+R+ PHQREG+K L+ C+ G G G+GAILADEMGLGK+ AI L VL+ KAV+VCP+SLV+NW NE KKW LG + + PV A ++ + +A F G + +L+ISYE++R++ + + S +GLL+ DEGHRLK+S KT ALK P R++LTGTP+QNDL+EFFAV DFVNPG L SL SFR+ + PI A+ D +A R REL +IT +FVLRRT +++ LPP EV IFCR RQ + YE A +R + + R L I+ LR++C HPDLV G L D+ D+ LG F +V V+ +++ S K+ + ++ KA R D+V++ SN+TS LD L++ R F RLDG T R ++V RFN + FL LSAKAGGVGLNL+GANR++LFD DWNPATD QAMARVWR GQ K V++YRLL TGT+EE IFQRQ+FKG L + + G
Sbjct: 215 PIVLDPFLAKRMRPHQREGVKFLYHCVQGLFFMTGEGGQGAILADEMGLGKSLQAIGLIWTVLKQHPGGNPGVRKAVIVCPASLVQNWVNEVKKW--LGDDRLEPVAVASGSSTFESKEALAAFING--NVRRLLIISYEMFRSYAEQMYK-SKIGLLVCDEGHRLKSSQGNKTIEALKKLPCRGRVILTGTPVQNDLEEFFAVCDFVNPGCLNSLASFRTVFANPIIASRDSNASNSAMTIGDSRARELGRITSQFVLRRTSNILAKYLPPKHEVAIFCRLQQRQQTAYEK----EAQSRFAVVSNTRR-----------------------------------------------------------FSAALSAINFLRKICCHPDLV----------GASL-------DSEDEDLG----------------------FSDEEEVVHDKKEVLR--------QFQIGDSSKIQITLSICKASLRVQ--DRVILVSNYTSTLDFLQEALSRKNIQFCRLDGSTTVGHRGDIVRRFNAGSLGDVFL--LSAKAGGVGLNLIGANRLILFDPDWNPATDLQAMARVWRDGQKKHVFVYRLLCTGTIEEKIFQRQLFKGELQSAVDREHHRDG 727
BLAST of mRNA_P-littoralis_Contig61.111.2 vs. uniprot
Match: UPI0010FAE37E (LOW QUALITY PROTEIN: DNA repair and recombination protein RAD54B n=1 Tax=Labrus bergylta TaxID=56723 RepID=UPI0010FAE37E) HSP 1 Score: 349 bits (895), Expect = 2.490e-98 Identity = 248/647 (38.33%), Postives = 327/647 (50.54%), Query Frame = 1
Query: 1222 EWT---AGDPPRPLLAGASLARRLHPHQREGLKVLWECLAGRGGYEGRGAILADEMGLGKTATAIALCTCVLRHR----RAECLKAVVVCPSSLVRNWANEFKKWCPLGANAVPV---DQAGAAAAQLVADFKIGAPSAYPILVISYELYRNHGKVINATSGLGLLIADEGHRLKNSSETKTTRALKACPAVMRLVLTGTPMQNDLDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDADEDVADFSTERTRELAQITGKFVLRRTKDVIRGSLPPASEVVIFCRPSARQLSLYESCIASSADARSLLYGDAERGGGXXXXXXXXXXXXQLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPVSLQGVLPLISTLRRLCNHPDLVAGTDGVVASGGGGLGGESNVEDARDDTLGELRGNGGGKENSRSTVTASRAAFKRPWKVPRSSGGVVAAAAAMVEPRYETEASGKLLVLEALLKAVRREFPCDKVVVTSNFTSALDVLEKLAERNAWGFLRLDGGTPTNSRQNLVDRFNKAPPENAFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKKVWMYRLLSTGTLEESIFQRQIFKGALYDLIQDSNEASGAHSSSST 3132
+W+ AG P ++ L L PHQR+GL L+EC+ G GAILADEMGLGKT ++ L +L+ +A + +VV P SLV+NW EF KW LG + V DQ V F + + +LVISYE+ + + GL+I DEGHRLKNS+ KT+ AL + R++LTGTP+QNDL EF+A+ +FVNPG+LGS ++R Y PI + E+V ER EL+++TG F+LRRT+++I LPP + +FC PS QL LYE + R+ L G + L I+ L++LCNHP L+ T GG ++E + D L EL F + SSGG+ T SGKLLVL LL A+R+ P D+VVV SN+T LD+L+ L + F RLDG TPTN RQ LVD FN +P N FLF LS+KAGGVGLNLVGA+ +VL+D DWNPA D QAMARVWR GQ K V +YRLL+ GT+EE IFQRQ+ K L + D + + H+S S+
Sbjct: 304 QWSNNKAGLPVVDVVIDPHLTHHLRPHQRDGLLFLYECVTGMRAVGRYGAILADEMGLGKTLQSVXLSWTLLKQGPYGGKAVAKRVLVVTPGSLVQNWGAEFNKW--LGRERISVFTVDQD-----HRVEQFVLSP--LHSVLVISYEMLLRCLEQVQKVE-FGLIICDEGHRLKNST-IKTSSALCSLSCTRRVILTGTPVQNDLQEFYAIIEFVNPGILGSSTAYRKVYEEPILRSRQPSCTEEVRVLGEERAAELSRLTGMFILRRTQEIINRYLPPRLDWTLFCEPSPLQLELYEQLLCHRV-FRACLQGSTQT------------------------------------------------------------HTHLACITALKKLCNHPGLLHSTVKGRTDGG-------SLESSLYDGLIEL--------------------FPESY----SSGGL------------NTADSGKLLVLSDLLTAIRQLSPSDRVVVVSNYTKTLDLLQDLCAHMGYTFCRLDGQTPTNQRQRLVDNFN-SPYSNHFLFLLSSKAGGVGLNLVGASHLVLYDIDWNPANDIQAMARVWRDGQKKTVHIYRLLTAGTIEERIFQRQVSKQGLSGTVVDLGKGA-EHTSFSS 833
BLAST of mRNA_P-littoralis_Contig61.111.2 vs. uniprot
Match: A0A517LQ73_9PEZI (Uncharacterized protein n=3 Tax=Venturia TaxID=5024 RepID=A0A517LQ73_9PEZI) HSP 1 Score: 347 bits (891), Expect = 8.950e-98 Identity = 235/629 (37.36%), Postives = 322/629 (51.19%), Query Frame = 1
Query: 1270 LARRLHPHQREGLKVLWECLAGRGGYEGRGAILADEMGLGKTATAIALCTCVLRHRRAE-----CLKAVVVCPSSLVRNWANEFKKWCPLGANAVPVDQAGAAAAQLVADFKIGAPSAYPILVISYELYRNHGKVINATSGLGLLIADEGHRLKNSSETKTTRALKACPAVMRLVLTGTPMQNDLDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDADEDVADFSTERTRELAQITGKFVLRRTKDVIRGSLPPASEVVIFCRPSARQLSLYESCIASSADARSLLYGDAERGGGXXXXXXXXXXXXQLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPVSLQGVLPLISTLRRLCNHPDLVAGTDGVVASGGGGLGGESNVEDARDDTLGELRGNGGGKENSRSTVTASRAAFKRPWKVPRSSGGVVAAAAAMVEPRYETEASGKLLVLEALLKAVRREFPCDKVVVTSNFTSALDVLEKLAERNAWGFLRLDGGTPTNSRQNLVDRFNKAPPENAFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKKVWMYRLLSTGTLEESIFQRQIFKGALYDLIQDSNEASGAHSSSSTGAV 3141
LAR L HQREG+K ++EC+ G G GAILADEMGLGKT IAL +L+ + KA++VCP +L++NW EF+KW LG + V V + DF G Y +++I YE R K +N + ++IADEGHRLK +++ K A+++ R+VL+GTP+QNDL EFFA+ D VNPGLLG +F+ + PI A +A + R+ ELA++TG+F+LRRT DVI LPP +E ++FCRP+ Q +LY + + S A S+ G E VSLQ LI+ L+++CN P L+ + + ED D T ST+ AS P K + G AS K+LVL +LL +R +K+V+ SN+TS LD+L L + + FLRLDG TP + RQ LVD+FNK PE +F F LSAKAGG GLNL+GA+R+VLFD DWNPATD QAMAR+ R GQ ++YR + G L+E I+QRQ+ K L D + DS +++ S A+
Sbjct: 280 LARHLRDHQREGVKFMYECVMGMR-ESGEGAILADEMGLGKTLQTIALLWTLLKQGPIDGNAPVVKKALIVCPVTLIQNWRKEFRKW--LGTDKVGVFVVDNDKKIRIKDFTKGR--IYNVMIIGYEKLRTVQKELNEGDAIDIVIADEGHRLK-TAQNKAAAAIRSLRTERRIVLSGTPLQNDLSEFFAMVDLVNPGLLGKYTTFKREFETPIIKARQPEATAKDTEKGEGRSEELARLTGQFILRRTADVIAKYLPPKTETILFCRPTPPQAALYRAVLESPMFAASMGSGSTE----------------------------------------------------------VSLQ----LINILKKICNSPALLT---------------KQSPEDNSDST---------------STLLASL-----PSKFLKVDNG----------------ASAKILVLNSLLHQLRNNTQ-EKIVLVSNYTSTLDILGNLLTSHGYNFLRLDGSTPASKRQVLVDKFNKEKPEQSFAFLLSAKAGGAGLNLIGASRLVLFDVDWNPATDLQAMARIHRDGQKHHCFIYRFVVKGALDEKIYQRQVTKMGLADAVVDSKKSNQTFSKEELKAL 788 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig61.111.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig61.111.2 >prot_P-littoralis_Contig61.111.2 ID=prot_P-littoralis_Contig61.111.2|Name=mRNA_P-littoralis_Contig61.111.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1173bp MEFTCMWSKDAQQKKRKRWTDGVARFFPSTGVLSIWDQDASAKVSSTRLKback to top mRNA from alignment at P-littoralis_Contig61:621356..632925+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig61.111.2 ID=mRNA_P-littoralis_Contig61.111.2|Name=mRNA_P-littoralis_Contig61.111.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=11570bp|location=Sequence derived from alignment at P-littoralis_Contig61:621356..632925+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig61:621356..632925+ >mRNA_P-littoralis_Contig61.111.2 ID=mRNA_P-littoralis_Contig61.111.2|Name=mRNA_P-littoralis_Contig61.111.2|organism=Pylaiella littoralis U1_48|type=CDS|length=3519bp|location=Sequence derived from alignment at P-littoralis_Contig61:621356..632925+ (Pylaiella littoralis U1_48)back to top |