prot_P-littoralis_Contig61.106.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig61.106.2
Unique Nameprot_P-littoralis_Contig61.106.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length277
Homology
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BLAST of mRNA_P-littoralis_Contig61.106.2 vs. uniprot
Match: D7FYL0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYL0_ECTSI)

HSP 1 Score: 318 bits (814), Expect = 3.950e-105
Identity = 173/274 (63.14%), Postives = 201/274 (73.36%), Query Frame = 0 
Query:    2 GSGSFLDGIMEAIFHEFCLKGVDFTTGAEAAFVTTAAAYFRMSPSEVRAPKPVEGEKAAXXXXXXXXXXXXXXXXXXVGAEGASSTGDAGEKPSAAAPXXXXXXXXXXXXXXETSEEEVERVLAAIDSGLVALSGDKEGVPFYRLHSVVAKAITRKKYILGVRRGDDLSNRFSVSMSPSLDIVLEENKAFAQIKNTLAGNATITFQVDVDVDCDETFYVKDKESGEVIQGKEESAGRRHRVRLESHHVLSDQSIEQPHVWKVVDLDNWLKGNAF 275
            GSGSFLDGIME+IF +FC KGVDFT GAEAAFVTTAAA F+M   +VRAPKP     AA                   G +GA   G   +  SA A               ETSEEE +RVLAA+D GLVALS DK GVP+YRLH VVAKAI RKK+I GV+RGDDLS RF+V+MSPSL+ VL+EN AFAQI+N LAGN T+TFQVDVD+ CDETFYVKDKE+GE+IQGK+ES+GR HRVRLES  +L +Q+IEQPH+WKV+DLD+WLKGNAF
Sbjct:   89 GSGSFLDGIMESIFEDFCFKGVDFTAGAEAAFVTTAAALFKMRTLKVRAPKPSVEAAAA-------------------GVDGAPKGGVEEDPASAGA----EQEEEDKEKSAETSEEEADRVLAAVDKGLVALSSDKGGVPYYRLHRVVAKAIRRKKFIFGVQRGDDLSGRFTVAMSPSLEFVLQENNAFAQIRNALAGNVTVTFQVDVDLACDETFYVKDKETGEIIQGKKESSGRIHRVRLESC-LLMEQAIEQPHIWKVIDLDDWLKGNAF 338
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BLAST of mRNA_P-littoralis_Contig61.106.2 vs. uniprot
Match: A0A7S2VG29_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2VG29_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 2.420e-5
Identity = 32/97 (32.99%), Postives = 49/97 (50.52%), Query Frame = 0 
Query:  182 DIVLEENKAFAQIKNTLAGNATITFQVDVDVDCDETFYVKDKESGEVIQGKEESAGRRHRVRLESHHVLSDQSIEQPHV---WKVVDLDNWLKGNAF 275
            D+V E  K     K T+   A++         C E F VKDK +G+VIQG E+       + L    V++D++     V   WK++D+D+ L+GN F
Sbjct:  246 DLVTEFAKEVGYSKRTVIAEASVK--------CKEFFQVKDKNTGQVIQGMEDDCEEEEVIHLARFEVVTDEAERGERVIGAWKLIDVDDLLEGNVF 334
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig61.106.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYL0_ECTSI3.950e-10563.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2VG29_9STRA2.420e-532.99Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig61contigP-littoralis_Contig61:584497..590005 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig61.106.2mRNA_P-littoralis_Contig61.106.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig61 584275..591008 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig61.106.2 ID=prot_P-littoralis_Contig61.106.2|Name=mRNA_P-littoralis_Contig61.106.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=277bp
MGSGSFLDGIMEAIFHEFCLKGVDFTTGAEAAFVTTAAAYFRMSPSEVRA
PKPVEGEKAAAAVAAAAAAETEAAAATVVGAEGASSTGDAGEKPSAAAPA
PAADPAAEKQPSAETSEEEVERVLAAIDSGLVALSGDKEGVPFYRLHSVV
AKAITRKKYILGVRRGDDLSNRFSVSMSPSLDIVLEENKAFAQIKNTLAG
NATITFQVDVDVDCDETFYVKDKESGEVIQGKEESAGRRHRVRLESHHVL
SDQSIEQPHVWKVVDLDNWLKGNAFW*
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