mRNA_P-littoralis_Contig61.90.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig61.90.1
Unique NamemRNA_P-littoralis_Contig61.90.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig61.90.1 vs. uniprot
Match: A0A6H5KWV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWV2_9PHAE)

HSP 1 Score: 379 bits (973), Expect = 7.820e-125
Identity = 180/227 (79.30%), Postives = 203/227 (89.43%), Query Frame = 1
Query:  163 LEWSLRWVRNAPGGAHKFHHFYDFVHLDEKWFYICKHGQRYYLYEGEDMPIRKVQHKSHVIKVMFLAAVARPRFDASRNGQFDGKIGIYPFTVQRAAQRNGRNRAAGTMVTYSVEVNRETYTQKLINNVFPDIRAKFPAASTVYVQQDNAPGHRVLQDPEVVAAAGQGGMRMELSNQPPNSPDMNVLDLGFFNSIQSLQDRTTPTTIDQLVAEVERAFWAQTPATLG 843
            L W+LRWVR + G AHKFHHF+DF+HLDEKWFYICK GQRYY YEGE +PIRKVQHKSHVIKVMFLAAVARPR+D+SR+ QFDGKIGIYPFTVQRAAQRNGRN AAGTMVT+SVEVNR  Y +KL NNVFPDIRAKFP++  ++ QQ+NAPGHR ++DP+VVAAAGQG  R+EL NQPPNSPD N+LDLGFFNSIQSLQDRTTPTT+++LVAEVERA WAQ P TLG
Sbjct:   34 LSWALRWVRPSAGDAHKFHHFFDFLHLDEKWFYICKQGQRYYFYEGEHLPIRKVQHKSHVIKVMFLAAVARPRYDSSRSRQFDGKIGIYPFTVQRAAQRNGRNMAAGTMVTHSVEVNRTLY-KKLNNNVFPDIRAKFPSSPIIFAQQENAPGHRAMEDPDVVAAAGQGAGRIELVNQPPNSPDCNILDLGFFNSIQSLQDRTTPTTVEELVAEVERALWAQKPETLG 259          
BLAST of mRNA_P-littoralis_Contig61.90.1 vs. uniprot
Match: A0A6H5JRZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRZ6_9PHAE)

HSP 1 Score: 275 bits (704), Expect = 6.530e-90
Identity = 144/179 (80.45%), Postives = 155/179 (86.59%), Query Frame = 1
Query:  352 MFLAAVARPRFDASRNGQFDGKIGIYPFTVQRAAQR----NGRNRAAGTMVTYSVEVNRETYTQKLINNVFPDIRAKFPAASTVYVQQDNAPGHRVLQDPEVVAAAGQGGMRMELSNQPPNSPDMNVLDLGFFNSIQSLQDRTTPTTIDQLVAEVERAFWAQTPATLGNVWTTLQSVLQ 876
            MFLAAVARPRFD+SRN  FDGKIGIYPFTVQRAAQR    N RNRAAGT+VT SVEVNR TY +KLINNV PDIRAKFPA STV+ QQD+APGHRV+ DPE+VAAA QG  R+EL NQP NSPDMNVLDLGFFNSIQSLQDRTTPTTIDQLVAEVERAFWAQ+P  +  VWTTLQSV +
Sbjct:    1 MFLAAVARPRFDSSRNRHFDGKIGIYPFTVQRAAQRAAQRNSRNRAAGTIVTRSVEVNRVTYKEKLINNVLPDIRAKFPAVSTVFAQQDSAPGHRVM-DPEIVAAAAQG-RRIELINQPANSPDMNVLDLGFFNSIQSLQDRTTPTTIDQLVAEVERAFWAQSPGAVDRVWTTLQSVFR 177          
BLAST of mRNA_P-littoralis_Contig61.90.1 vs. uniprot
Match: A0A6P6VBP7_COFAR (uncharacterized protein LOC113715216 n=4 Tax=Coffea TaxID=13442 RepID=A0A6P6VBP7_COFAR)

HSP 1 Score: 281 bits (718), Expect = 1.180e-89
Identity = 152/332 (45.78%), Postives = 216/332 (65.06%), Query Frame = 1
Query:    7 EIPLKNRTTQRSVAAALEIPLTTLHRNLKNLGLRACSRFLKPLLTDNGKAARLEWSLRWVRNAP-GGAHKFHHFYDFVHLDEKWFYICKHGQRYYLYEGEDMPIRKVQHKSHVIKVMFLAAVARPRFDASRNGQFDGKIGIYPFTVQRAAQRNGRNRAAGTMVTYSV-EVNRETYTQKLINNVFPDIRAKFPAA---STVYVQQDNAPGHRVLQDPEVVAAAGQGGMRMELSNQPPNSPDMNVLDLGFFNSIQSLQDRTTPTTIDQLVAEVERAFWAQTPATLGNVWTTLQSVLQEVMLARGDNTFKLPHLRKATAARRGTPKPAELPCSQE 987
            EIPL+ RT  RS++  +++  +TLHR +K   ++A S  LKP LTD+ K  RL++ L  ++      A  F + ++ VH+DEKWFY+ K  ++YYL+  E+ P+R  + K  ++KVMFLAAVARPRFD SRN  FDGKIGI+PF  +  A+RN +NR AGT+ T  +  V +E Y + LI+NV P IRAK+P +   S +++QQDNA  H    D E + AA + G  + LS QPPNSPDMNVLDLG+F +IQSLQ +  P +ID+L++ VE++F   +  +L NV+ TLQ  + EVM   G N +K+PH+ K    R G   P ++ C +E
Sbjct:    2 EIPLRCRTNIRSLSTKMKVAKSTLHRRIKEGVIKAHSNALKPHLTDDNKLVRLKFCLSMLQQESLNDAPIFENMFNMVHIDEKWFYMTKESEKYYLHPEEEHPMRTCRSKKFIVKVMFLAAVARPRFDCSRNKHFDGKIGIFPFAFKEPAKRNSKNRVAGTLETKPILSVTKEVYRRCLIDNVLPAIRAKWPQSDVISPIFIQQDNAKPHIDPMDVEFIEAATREGFDIRLSFQPPNSPDMNVLDLGYFRAIQSLQHQEAPNSIDELISAVEKSFDELSSESLNNVFLTLQLCMLEVMKNCGGNNYKVPHIGKQRLIRDGN-LPLQIGCDKE 332          
BLAST of mRNA_P-littoralis_Contig61.90.1 vs. uniprot
Match: UPI00125DF384 (uncharacterized protein LOC116015901 n=1 Tax=Ipomoea triloba TaxID=35885 RepID=UPI00125DF384)

HSP 1 Score: 280 bits (717), Expect = 1.270e-88
Identity = 154/333 (46.25%), Postives = 211/333 (63.36%), Query Frame = 1
Query:    1 LAEIPLKNRTTQRSVAAALEIPLTTLHRNLKNLGLRACSRFLKPLLTDNGKAARLEWSLRWV-RNAPGGAHKFHHFYDFVHLDEKWFYICKHGQRYYLYEGEDMPIRKVQHKSHVIKVMFLAAVARPRFDASRNGQFDGKIGIYPFTVQRAAQRNGRNRAAGTMVTYSVE-VNRETYTQKLINNVFPDIRAKFPAAST--VYVQQDNAPGHRVLQDPEVVAAAGQGGMRMELSNQPPNSPDMNVLDLGFFNSIQSLQDRTTPTTIDQLVAEVERAFWAQTPATLGNVWTTLQSVLQEVMLARGDNTFKLPHLRKATAARRGTPKPAELPCSQE 987
            ++ IPL  RTT RS+A AL +  T+LHR +K   L++ S  +KPLLT+  +  RL++ +  +  N+P     F   YD VH+DEKWF++ K  Q+YYL  GED P R  + K  + KVMFL AVARPRFD+ RN  FDGKIGI+PF  + AA+R  +NR AGT+VT  +E VN+E   + LI+ V P IRAK+  +S+  +++QQDNA  H  + D E + AA + G  + L+ QPPNSPDMNVLDLGFF +IQSLQ +  P  +D+LV   ++AF   +  +L NV+ TLQ  + EVM   G N +K+PH+ K    R G   P  + C  E
Sbjct:   67 VSRIPLNRRTTIRSMATALNMSKTSLHRRVKEGSLKSHSNAIKPLLTEENRKVRLQFCISMIDSNSPPHNPSFIDMYDRVHIDEKWFFLSKSSQKYYLLPGEDEPYRTCKSKKFIAKVMFLCAVARPRFDSGRNEMFDGKIGIFPFIYKEAAKRRSKNREAGTLVTKPIESVNKEVTRKWLIDYVLPAIRAKWSLSSSKSIFIQQDNARPHISVNDAEFLEAAQKDGFDIRLTCQPPNSPDMNVLDLGFFRAIQSLQYQEAPRNVDELVVATQKAFDDISIESLSNVFLTLQLCMVEVMKRFGGNNYKIPHINKQKLEREGR-LPTTISCDME 398          
BLAST of mRNA_P-littoralis_Contig61.90.1 vs. uniprot
Match: UPI000CD9DCB3 (uncharacterized protein LOC111916103 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD9DCB3)

HSP 1 Score: 273 bits (697), Expect = 2.760e-85
Identity = 147/333 (44.14%), Postives = 210/333 (63.06%), Query Frame = 1
Query:    1 LAEIPLKNRTTQRSVAAALEIPLTTLHRNLKNLGLRACSRFLKPLLTDNGKAARLEWSLRWVRNAP--GGAHKFHHFYDFVHLDEKWFYICKHGQRYYLYEGEDMPIRKVQHKSHVIKVMFLAAVARPRFDASRNGQFDGKIGIYPFTVQRAAQRNGRNRAAGTMVTYSV-EVNRETYTQKLINNVFPDIRAKFPAAST--VYVQQDNAPGHRVLQDPEVVAAAGQGGMRMELSNQPPNSPDMNVLDLGFFNSIQSLQDRTTPTTIDQLVAEVERAFWAQTPATLGNVWTTLQSVLQEVMLARGDNTFKLPHLRKATAARRGTPKPAELPCSQ 984
            ++EIPL++R+  RS+A +L +  +TLHR +K   LR  +  +KP LT   + ARLE+ L  +  +        FH  ++ VH+DEKWFY+ K  +RYYL  G+D P+R  + K  + K+MFLAAVARPR+D+S N  F GKIGIYPFT    A+R+ +NR AGTM T  +  VN+E     LI  V PDIRAK+P   T  +++QQDNA  H  + D E + AA + G  + L  QPPNSPD+NVLDLGFF +IQSLQ++   +T D+LV  V+ +F       L NV+ TLQ+ ++E++  +G N + +PH+ K+   R+G   P ++ C Q
Sbjct:   92 VSEIPLRHRSNIRSLAKSLNVSKSTLHRRIKEGVLRPHTNVIKPTLTHENRRARLEYCLSKITLSSLFSPIPTFHDMFNVVHIDEKWFYMSKPSKRYYLVPGDDEPLRTCKSKKFITKIMFLAAVARPRYDSSGNEVFSGKIGIYPFTTLEPAKRSSKNRVAGTMETKPILSVNKEVTRSWLIEKVLPDIRAKWPRGHTGPIFIQQDNAKPHIDVDDSEFLEAASRDGFDIRLCFQPPNSPDLNVLDLGFFRAIQSLQEQEALSTTDELVNAVQTSFERMQSQQLNNVFLTLQTCMKEIIKVQGGNNYHIPHIGKSRLDRQGN-LPLQIECDQ 423          
BLAST of mRNA_P-littoralis_Contig61.90.1 vs. uniprot
Match: A0A834HDF7_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834HDF7_RHOSS)

HSP 1 Score: 272 bits (695), Expect = 6.350e-85
Identity = 152/339 (44.84%), Postives = 215/339 (63.42%), Query Frame = 1
Query:    1 LAEIPLKNRTTQRSVAAALEIPLTTLHRNLKNLGLRACSRFLKPLLTDNGKAARLEWSLRWVR-NAPGGAHKFHHFYDFVHLDEKWFYICKHGQRYYLYEGEDMPIRKVQHKSHVIKVMFLAAVARPRFDASRNGQFDGKIGIYPFTVQRAAQRNGRNRAAGTMVTYSV-EVNRETYTQKLINNVFPDIRAKFP---AASTVYVQQDNAPGHRVLQDPEVVAAAGQGGMRMELSNQPPNSPDMNVLDLGFFNSIQSLQDRTTPTTIDQLVAEVERAFWAQTPATLGNVWTTLQSVLQEVMLARGDNTFKLPHLRKATAARRGTPKPAELPCSQEAWQAA 1002
            ++E+PL+ RT+ RS+A A+ +P TTL R +K   +R  +  +KP LT+ GK ARL +    +  ++      F + Y++VH+DEKWF++ +  +RYYL   E  P+R  + K  + KVMFLAAVARPRFDA RN +F GKIGI+PFT +  A+R+ +N  AGT+ T ++  V +E     LI+ V P IRAK+P   +  T+++QQDNA  H    D E V AA + G  + LS QPPNSPD+NVLDL +FNSIQSLQ +  PTTID+LVA VE++F    P +L  ++ +LQ+ + E+M   G N +K PHL K    R G   P  L C +E  ++A
Sbjct:   97 VSEVPLRRRTSIRSLAKAVTVPQTTLFRRIKEGDIRPHTIAVKPHLTEEGKKARLRFCFSMLEPSSLANDPVFKNMYNYVHIDEKWFFLSREVERYYLLPREREPLRTCKSKRFITKVMFLAAVARPRFDAFRNEEFSGKIGIFPFTFKEPAKRSSKNCVAGTLETKAITSVTKEIMRSCLIDKVLPAIRAKWPHYDSTETIFIQQDNAKPHIHQLDSEFVQAARKDGFDIRLSFQPPNSPDLNVLDLRYFNSIQSLQHQEAPTTIDELVAAVEKSFENLAPQSLNEIFLSLQACMIEIMKVDGGNHYKQPHLGKNKLMRSGN-LPTHLSCDREVVESA 434          
BLAST of mRNA_P-littoralis_Contig61.90.1 vs. uniprot
Match: UPI000CD873B3 (uncharacterized protein LOC111883545 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD873B3)

HSP 1 Score: 271 bits (693), Expect = 1.070e-84
Identity = 149/330 (45.15%), Postives = 204/330 (61.82%), Query Frame = 1
Query:    7 EIPLKNRTTQRSVAAALEIPLTTLHRNLKNLGLRACSRFLKPLLTDNGKAARLEWSLRWV-RNAPGGAHKFHHFYDFVHLDEKWFYICKHGQRYYLYEGEDMPIRKVQHKSHVIKVMFLAAVARPRFDASRNGQFDGKIGIYPFTVQRAAQRNGRNRAAGTMVTYSV-EVNRETYTQKLINNVFPDIRAKFPAAST--VYVQQDNAPGHRVLQDPEVVAAAGQGGMRMELSNQPPNSPDMNVLDLGFFNSIQSLQDRTTPTTIDQLVAEVERAFWAQTPATLGNVWTTLQSVLQEVMLARGDNTFKLPHLRKATAARRGTPKPAELPCSQ 984
            +IPL+ R+  RS+A  L +  +T+HR +K   LR  +  +KP LT   K ARLE+ L  + R+       FH  ++ +H+DEKWFY+ K  +RYYL  GED P+R  Q K  + KVMFLAAVARPRFDAS N  F GKIGIYPFT    A+R+ +NR AGT+ T  +  V +E     LI  V PDIRAK+P +    +++QQDNA  H  + D E + AA Q G  + L+ QP NSPD+NVLDLGFF +IQSLQ++    TID+LV  V+ AF       L NV+ TLQ+ ++E++  +G N +++PH+ K    R G   P  + C +
Sbjct:   94 DIPLRRRSNIRSLANLLNVSKSTMHRRIKEGALRPHTNAIKPTLTHENKRARLEFCLSKISRSLSSNIPTFHDMFNVIHIDEKWFYMSKPSRRYYLVPGEDEPLRTCQSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIYPFTRLEPAKRSSKNRVAGTLETKPILSVTKEVTRSWLIEKVLPDIRAKWPRSHVGPIFIQQDNAKPHIDVNDNEFLEAASQDGFDIRLNFQPSNSPDLNVLDLGFFRAIQSLQEQEALGTIDELVHAVQTAFEKMQSQQLNNVFLTLQTCMREIIKVQGGNNYQIPHIGKNRLEREGN-LPLRIGCDE 422          
BLAST of mRNA_P-littoralis_Contig61.90.1 vs. uniprot
Match: A0A6P6X993_COFAR (uncharacterized protein LOC113741020 n=2 Tax=Coffea TaxID=13442 RepID=A0A6P6X993_COFAR)

HSP 1 Score: 267 bits (683), Expect = 1.320e-84
Identity = 144/316 (45.57%), Postives = 205/316 (64.87%), Query Frame = 1
Query:   55 LEIPLTTLHRNLKNLGLRACSRFLKPLLTDNGKAARLEWSLRWVRNAP-GGAHKFHHFYDFVHLDEKWFYICKHGQRYYLYEGEDMPIRKVQHKSHVIKVMFLAAVARPRFDASRNGQFDGKIGIYPFTVQRAAQRNGRNRAAGTMVTYSV-EVNRETYTQKLINNVFPDIRAKFPAA---STVYVQQDNAPGHRVLQDPEVVAAAGQGGMRMELSNQPPNSPDMNVLDLGFFNSIQSLQDRTTPTTIDQLVAEVERAFWAQTPATLGNVWTTLQSVLQEVMLARGDNTFKLPHLRKATAARRGTPKPAELPCSQE 987
            +++  +TLHR +K   ++A S  LKP LTD+ K  RL++ L  ++      A  F + ++ VH+DEKWFY+ K  ++YYL+  E+ P+R  + K  ++KVMFLAAVARPRFD SRN  FDGKIGI+PF  +  A+RN +NR AGT+ T  +  V +E Y + LI+NV P IRAK+P +   S +++QQDNA  H    D E + AA + G  + LS QPPNSPDMNVLDLG+F +IQSLQ +  P +ID+L++ VE++F   +  +L NV+ TLQ  + EVM   G N +K+PH+ K    R G   P ++ C +E
Sbjct:    1 MKVAKSTLHRRIKEGVIKAHSNALKPHLTDDNKLVRLKFCLSMLQQESLNDAPVFENMFNMVHIDEKWFYMTKESEKYYLHPEEEHPMRTCRSKKFIVKVMFLAAVARPRFDCSRNKHFDGKIGIFPFAFKEPAKRNSKNRVAGTLETKPILSVTKEVYRRCLIDNVLPAIRAKWPQSDVISPIFIQQDNAKPHIDPMDVEFIEAATREGFDIRLSFQPPNSPDMNVLDLGYFRAIQSLQHQEAPNSIDELISAVEKSFDELSSESLNNVFLTLQLCMLEVMKNCGGNNYKVPHIGKQRLIRDGN-LPLQIGCDKE 315          
BLAST of mRNA_P-littoralis_Contig61.90.1 vs. uniprot
Match: A0A6A4ZGT3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZGT3_9STRA)

HSP 1 Score: 267 bits (682), Expect = 7.050e-84
Identity = 142/311 (45.66%), Postives = 205/311 (65.92%), Query Frame = 1
Query:   10 IPLKNRTTQRSVAAALEIPLTTLHRNLKNLG-LRACSRFLKPLLTDNGKAARLEWSLRWVRNAPGGAHKFHHFYDFVHLDEKWFYICKHGQRYYLYEGEDMPIRKVQHKSHVIKVMFLAAVARPRFDASRNGQFDGKIGIYPFTVQRAAQRNGRNRAAGTMVTYSVEVNRETYTQKLINNVFPDIRAKFPAAST---VYVQQDNAPGHRVLQDPEVVAAAGQGGMRMELSNQPPNSPDMNVLDLGFFNSIQSLQDRTTPTTIDQLVAEVERAFWAQTPATLGNVWTTLQSVLQEVMLARGDNTFKLPHLRK 930
            +P   R T RS+AA  +IP TT+ R++K    L+A S +++P+LTD  K AR++++  ++R   GG   F + +D+VH+DEKWFY+ K  +RYY+Y+ E++  R  +HKSH+ K+MFLAAVARPR+D      FDGKIG++PF  +  A+R+ +NR  GT++     VN + Y  K++N V P I AKFP A+    V +QQDNA  HR +   E++ A    G+ +E  NQPPNSPD NVLDLGFFNSIQSLQ + +  +I++L+  VE AF++    TL   + TLQ V+++ +   G N +KLPHLRK
Sbjct:   15 VPHHLRQTMRSLAAQADIPKTTILRHMKATSRLKARSSYIRPMLTDANKRARIKFAASFLRPTSGGT-TFVNMHDYVHVDEKWFYLTKVKRRYYVYDDEEVAARACKHKSHITKIMFLAAVARPRYDPHTRSFFDGKIGVWPFVQESVAKRSSKNRPRGTVIIEPQSVNGDVYCDKMLNEVVPAIHAKFPVATLAKGVKIQQDNASPHRCVTT-ELLHANEVIGITIE--NQPPNSPDFNVLDLGFFNSIQSLQHQKSTRSIEELIGAVESAFYSLPSDTLAKTFITLQKVMEKSLEMLGSNNYKLPHLRK 321          
BLAST of mRNA_P-littoralis_Contig61.90.1 vs. uniprot
Match: A0A6A4ZEB5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZEB5_9STRA)

HSP 1 Score: 270 bits (689), Expect = 1.170e-83
Identity = 141/309 (45.63%), Postives = 193/309 (62.46%), Query Frame = 1
Query:   10 IPLKNRTTQRSVAAALEIPLTTLHRN-LKNLGLRACSRFLKPLLTDNGKAARLEWSLRWVRNAPGGAHKFHHFYDFVHLDEKWFYICKHGQRYYLYEGEDMPIRKVQHKSHVIKVMFLAAVARPRFDASRNGQFDGKIGIYPFTVQRAAQRNGRNRAAGTMVTYSVEVNRETYTQKLINNVFPDIRAKFPAAS-TVYVQQDNAPGHRVLQDPEVVAAAGQGGMRMELSNQPPNSPDMNVLDLGFFNSIQSLQDRTTPTTIDQLVAEVERAFWAQTPATLGNVWTTLQSVLQEVMLARGDNTFKLPHLRK 930
            +P   R T RSVAA++ IPLTTLHR+ +      A S +LKP LTD     RLE+++ ++R+ PG    F   +D VH+DEKWFY+ K+   YY+Y+ E + IR VQ KSH+ KVMFLAAVARPR+D +R   FDGK+G++PF V   A+R+ +NR  GT+ T  V V  + Y   + + V P I  K P +  ++ +QQDNA  HR +    +          +E+ NQPPNSPD NVLDLGFFN+IQSLQ + +  TID+++  VE AF      TL   + TLQ V++E M   G N +KLPH++K
Sbjct:  115 VPHARRRTLRSVAASVVIPLTTLHRHKMSEPRFSAKSNWLKPRLTDANIKLRLEFAMSFLRSGPGDRQVFSDMHDIVHVDEKWFYLTKNKSVYYIYDDEVLAIRSVQSKSHITKVMFLAAVARPRYDFARREMFDGKLGVWPFVVDEPAKRSSKNRPKGTIETKPVSVTADVYQAMMFDKVLPAIALKMPRSHRSIRIQQDNASPHRSMTTEAIKRRCDPRFTSIEVKNQPPNSPDYNVLDLGFFNAIQSLQHQKSTRTIDEMIVAVENAFVEMPVDTLSKTFLTLQKVMEESMARGGSNNYKLPHMKK 423          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig61.90.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWV2_9PHAE7.820e-12579.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRZ6_9PHAE6.530e-9080.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6P6VBP7_COFAR1.180e-8945.78uncharacterized protein LOC113715216 n=4 Tax=Coffe... [more]
UPI00125DF3841.270e-8846.25uncharacterized protein LOC116015901 n=1 Tax=Ipomo... [more]
UPI000CD9DCB32.760e-8544.14uncharacterized protein LOC111916103 n=1 Tax=Lactu... [more]
A0A834HDF7_RHOSS6.350e-8544.84Uncharacterized protein n=1 Tax=Rhododendron simsi... [more]
UPI000CD873B31.070e-8445.15uncharacterized protein LOC111883545 n=1 Tax=Lactu... [more]
A0A6P6X993_COFAR1.320e-8445.57uncharacterized protein LOC113741020 n=2 Tax=Coffe... [more]
A0A6A4ZGT3_9STRA7.050e-8445.66Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6A4ZEB5_9STRA1.170e-8345.63Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig61contigP-littoralis_Contig61:527776..528777 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog90675.XP_010474489.1
PFAMsHTH_Tnp_Tc3_2
Model size1002
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.1e-78
EggNOG OGs2CMKC@1|root,2QQNW@2759|Eukaryota
Cds size1002
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791271.2418194-CDS-P-littoralis_Contig61:527775..5287771680791271.2418194-CDS-P-littoralis_Contig61:527775..528777Pylaiella littoralis U1_48CDSP-littoralis_Contig61 527776..528777 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig61.90.1prot_P-littoralis_Contig61.90.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig61 527776..528777 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig61.90.1

>prot_P-littoralis_Contig61.90.1 ID=prot_P-littoralis_Contig61.90.1|Name=mRNA_P-littoralis_Contig61.90.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=334bp
LAEIPLKNRTTQRSVAAALEIPLTTLHRNLKNLGLRACSRFLKPLLTDNG
KAARLEWSLRWVRNAPGGAHKFHHFYDFVHLDEKWFYICKHGQRYYLYEG
EDMPIRKVQHKSHVIKVMFLAAVARPRFDASRNGQFDGKIGIYPFTVQRA
AQRNGRNRAAGTMVTYSVEVNRETYTQKLINNVFPDIRAKFPAASTVYVQ
QDNAPGHRVLQDPEVVAAAGQGGMRMELSNQPPNSPDMNVLDLGFFNSIQ
SLQDRTTPTTIDQLVAEVERAFWAQTPATLGNVWTTLQSVLQEVMLARGD
NTFKLPHLRKATAARRGTPKPAELPCSQEAWQAA
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mRNA from alignment at P-littoralis_Contig61:527776..528777-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig61.90.1 ID=mRNA_P-littoralis_Contig61.90.1|Name=mRNA_P-littoralis_Contig61.90.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1002bp|location=Sequence derived from alignment at P-littoralis_Contig61:527776..528777- (Pylaiella littoralis U1_48)
CTGGCGGAGATTCCCCTCAAGAACCGCACCACGCAAAGGTCGGTTGCCGC AGCTTTGGAGATTCCGCTAACAACCCTCCATCGAAACCTCAAGAATCTAG GCCTACGCGCGTGCTCGAGGTTCCTGAAGCCGCTTCTCACTGACAACGGC AAGGCTGCTAGACTGGAGTGGTCGTTGAGGTGGGTTCGGAATGCCCCTGG GGGTGCACACAAGTTCCATCACTTCTACGACTTCGTTCACCTGGACGAGA AGTGGTTCTACATATGCAAGCATGGTCAGCGGTACTACCTCTACGAGGGC GAGGACATGCCCATTAGAAAAGTCCAACACAAGAGCCACGTGATCAAGGT CATGTTCCTCGCAGCAGTTGCTCGGCCGCGCTTTGACGCTAGCCGCAACG GCCAGTTCGATGGCAAGATCGGCATCTACCCCTTCACGGTGCAGCGCGCT GCTCAGCGCAACGGCAGAAACAGGGCGGCGGGGACAATGGTGACGTACAG CGTGGAGGTCAACCGCGAGACGTACACACAGAAGCTGATCAACAACGTGT TCCCAGACATCAGGGCGAAATTTCCGGCCGCCTCGACCGTCTATGTGCAG CAGGACAACGCGCCGGGGCACCGTGTGCTGCAAGACCCTGAGGTCGTGGC GGCGGCCGGGCAAGGAGGGATGAGGATGGAGCTCTCAAACCAGCCTCCCA ACAGCCCGGATATGAACGTCCTCGACCTCGGCTTCTTCAACTCCATCCAG TCCTTGCAAGACCGCACCACTCCCACCACGATTGACCAGCTTGTGGCCGA AGTGGAGAGGGCTTTTTGGGCCCAGACGCCGGCTACTCTCGGCAACGTGT GGACAACGCTGCAGAGCGTTCTTCAGGAGGTGATGCTGGCGCGAGGCGAC AACACGTTCAAGCTACCGCATCTTCGCAAGGCCACGGCAGCACGCCGGGG CACGCCGAAACCGGCGGAGCTACCGTGCAGTCAGGAGGCATGGCAGGCAG CG
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Coding sequence (CDS) from alignment at P-littoralis_Contig61:527776..528777-

>mRNA_P-littoralis_Contig61.90.1 ID=mRNA_P-littoralis_Contig61.90.1|Name=mRNA_P-littoralis_Contig61.90.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1002bp|location=Sequence derived from alignment at P-littoralis_Contig61:527776..528777- (Pylaiella littoralis U1_48)
CTGGCGGAGATTCCCCTCAAGAACCGCACCACGCAAAGGTCGGTTGCCGC
AGCTTTGGAGATTCCGCTAACAACCCTCCATCGAAACCTCAAGAATCTAG
GCCTACGCGCGTGCTCGAGGTTCCTGAAGCCGCTTCTCACTGACAACGGC
AAGGCTGCTAGACTGGAGTGGTCGTTGAGGTGGGTTCGGAATGCCCCTGG
GGGTGCACACAAGTTCCATCACTTCTACGACTTCGTTCACCTGGACGAGA
AGTGGTTCTACATATGCAAGCATGGTCAGCGGTACTACCTCTACGAGGGC
GAGGACATGCCCATTAGAAAAGTCCAACACAAGAGCCACGTGATCAAGGT
CATGTTCCTCGCAGCAGTTGCTCGGCCGCGCTTTGACGCTAGCCGCAACG
GCCAGTTCGATGGCAAGATCGGCATCTACCCCTTCACGGTGCAGCGCGCT
GCTCAGCGCAACGGCAGAAACAGGGCGGCGGGGACAATGGTGACGTACAG
CGTGGAGGTCAACCGCGAGACGTACACACAGAAGCTGATCAACAACGTGT
TCCCAGACATCAGGGCGAAATTTCCGGCCGCCTCGACCGTCTATGTGCAG
CAGGACAACGCGCCGGGGCACCGTGTGCTGCAAGACCCTGAGGTCGTGGC
GGCGGCCGGGCAAGGAGGGATGAGGATGGAGCTCTCAAACCAGCCTCCCA
ACAGCCCGGATATGAACGTCCTCGACCTCGGCTTCTTCAACTCCATCCAG
TCCTTGCAAGACCGCACCACTCCCACCACGATTGACCAGCTTGTGGCCGA
AGTGGAGAGGGCTTTTTGGGCCCAGACGCCGGCTACTCTCGGCAACGTGT
GGACAACGCTGCAGAGCGTTCTTCAGGAGGTGATGCTGGCGCGAGGCGAC
AACACGTTCAAGCTACCGCATCTTCGCAAGGCCACGGCAGCACGCCGGGG
CACGCCGAAACCGGCGGAGCTACCGTGCAGTCAGGAGGCATGGCAGGCAG
CG
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