mRNA_P-littoralis_Contig61.89.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig61.89.1
Unique NamemRNA_P-littoralis_Contig61.89.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig61.89.1 vs. uniprot
Match: A0A6H5K558_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K558_9PHAE)

HSP 1 Score: 426 bits (1096), Expect = 3.300e-136
Identity = 232/466 (49.79%), Postives = 302/466 (64.81%), Query Frame = 1
Query:   16 LRLIMTGTAGTGKTVAIREMVRRIGRYRFLLLAPTGNASCAIGGQTLHSGLIIPLSSRGQRRGADPSDLSAPSREDLQQRLRKVEFILVDELSMIAQGIPGLMSIRCK-ALEGLPGSHAR--QQGLCGGMNVILVGDSMQLPPVGAAPVWNPTSASDGHIIEGYQAWTHLNAAVELTEVRRQEGDDQASFWQVLSHVA*GCVVHADWQVLLGTMRSGRTVEEAGAFDEAVHIFPTNARADDWN*ERLQLFGTSVARINAGHTLPGFR-LRLGRFRGMAPHLFLAVGF*VFINNNIWTAAGLANGGVAEVIHMHWPADRAPPLQPHGLFVRMENYRGDH------------GPVSLRNIVPIVPIEATDEQPPTAISRRGRAPRNNCPGRCVRRQVPLTLAFAITIHTSRGQSLSRAAVDIGRREQTDGQTFTALSRVRSLCGLLLEDADFERIAHIGNSRSFGRRL 1365
            LRL++TGTAGTGKTV IREMVR +G+ RF+L+APTGNA+CAIGG T+H G  IP+      R +DPS ++  +  DLQ+R+ +V+FILVDE SM+ Q + GLMS R K A+EG  G      +Q + GG+++ILVGD  QLPPVGA+P+W    ++ G  ++G QAW  +N AVELT+V RQ+G +QA+F   L  +A G     DW VL     +     E   FD+AVHIFPTNA ADDWN  RL   GT +ARINA HT+ G+  +   RFRG+  H+FLA+G  VF+NNN+W +AGLANG V EV+HM W   + PP  P  ++VR+ENYRG              G + L N+ PI P++  D+QPPT   RRG         RC R Q+PL LAF ITI+ S+G +L R  +DIG  E++DGQ+FTA SR R+L  +LLE    ER   IG+SRSF  RL
Sbjct:  362 LRLLLTGTAGTGKTVVIREMVRLVGQQRFILMAPTGNAACAIGGMTIHGGFRIPVVQ--SNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVNNNVWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQYFEQPLRRDWADGEIDLTNLCPIAPMDVMDDQPPTG-RRRGDG---TSIARCFRMQLPLMLAFGITIYKSQGNTLLRCFLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLKIGDSRSFQSRL 821          
BLAST of mRNA_P-littoralis_Contig61.89.1 vs. uniprot
Match: A0A6H5K692_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K692_9PHAE)

HSP 1 Score: 404 bits (1039), Expect = 9.310e-124
Identity = 221/455 (48.57%), Postives = 293/455 (64.40%), Query Frame = 1
Query:   52 KTVAIREMVRRIGRYRFLLLAPTGNASCAIGGQTLHSGLIIPLSSRGQRRGADPSDLSAPSREDLQQRLRKVEFILVDELSMIAQGIPGLMSIRCK-ALEGLPGSHA--RQQGLCGGMNVILVGDSMQLPPVGAAPVWNPTSASDGHIIEGYQAWTHLNAAVELTEVRRQEGDDQASFWQVLSHVA*GCVVHADWQVLLGTMRSGRTVEEAGAFDEAVHIFPTNARADDWN*ERLQLFGTSVARINAGHTLPGF-RLRLGRFRGMAPHLFLAVGF*VFINNNIWTAAGLANGGVAEVIHMHWPADRAPPLQPHGLFVRMENYRGDH------------GPVSLRNIVPIVPIEATDEQPPTAISRRGRAPRNNCPGRCVRRQVPLTLAFAITIHTSRGQSLSRAAVDIGRREQTDGQTFTALSRVRSLCGLLLEDAD-FERIAHIGNSRSFGRRL 1365
            + +A+REMVR++GR RFLLLAPTGNA+CAIGG+T+H+GL + + +R +    D  ++S  +R DLQQ+++ V+F+LVDE SMI Q + G+MS+R K A+EG        R  GL GG+ +I+VGD +QL  V  +P+W     S     +G  AW  +NAAV+LT+V RQ+G  QA+F + L  +A G    ADW  L     +     E  +FD AVHIFPTN  ADDWN  RLQ  GT +ARI+A H++ G+  +   RFRG+   LFLAVG  VFINNN+WT+ GLANG   EV+HM W     PP  P  ++VR+ENYRG+               V LRN+VPI PI+A D+ PP A+ RRG     N  GRC+R Q+PL LAF ITIH S+G +L R  +DIG +E++DGQTFTALSR R+L  +LL+     ER+  IG SR+FG RL
Sbjct: 1185 QALAVREMVRQLGRQRFLLLAPTGNAACAIGGETIHTGLRVGVQNRPR---GDLGEISESARRDLQQKIQGVDFVLVDEFSMIGQDMLGMMSVRLKQAVEGRRTYWVDDRHLGLFGGLCIIMVGDIIQLLTVAQSPMWTSRPQSSALSGQGLYAWLGMNAAVQLTQVMRQQGAAQAAFRETLLRIAEGEATEADWNTLRPRFTTAVDAAERESFDNAVHIFPTNGAADDWNWRRLQALGTPIARIDADHSMHGYAHIPSDRFRGLEGQLFLAVGARVFINNNVWTSGGLANGAAGEVVHMQWAPGTQPPSLPEVVWVRVENYRGEQYFSEPLERPWGGRVVDLRNVVPISPIDAPDDHPPAALRRRGGGANTNAQGRCIRTQLPLMLAFGITIHKSQGATLLRCFLDIGEQEKSDGQTFTALSRCRALDNMLLQPLFCLERLQRIGTSRTFGARL 1636          
BLAST of mRNA_P-littoralis_Contig61.89.1 vs. uniprot
Match: A0A6H5KDL6_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDL6_9PHAE)

HSP 1 Score: 354 bits (908), Expect = 6.960e-114
Identity = 198/422 (46.92%), Postives = 260/422 (61.61%), Query Frame = 1
Query:  148 QTLHSGLIIPLSSRGQRRGADPSDLSAPSREDLQQRLRKVEFILVDELSMIAQGIPGLMSIRCK-ALEGLPGSHAR--QQGLCGGMNVILVGDSMQLPPVGAAPVWNPTSASDGHIIEGYQAWTHLNAAVELTEVRRQEGDDQASFWQVLSHVA*GCVVHADWQVLLGTMRSGRTVEEAGAFDEAVHIFPTNARADDWN*ERLQLFGTSVARINAGHTLPGFR-LRLGRFRGMAPHLFLAVGF*VFINNNIWTAAGLANGGVAEVIHMHWPADRAPPLQPHGLFVRMENYRGDH------------GPVSLRNIVPIVPIEATDEQPPTAISRRGRAPRNNCPGRCVRRQVPLTLAFAITIHTSRGQSLSRAAVDIGRREQTDGQTFTALSRVRSLCGLLLEDADFERIAHIGNSRSFGRRL 1365
            QT+H G  IP+      R +DPS ++  +  DLQ+R+ +V+FILVDE SM+ Q I GLMS R K A+EG  G      +Q + GG+++ILVGD  QLPPVGA P+W    ++ G  ++G QAW  +N AVELT+V RQ+G +QA+F   L  +A G     DW VL     +     E   FD+AVHIFPTNA ADDWN  RL   GT +ARINA HT+ G+  +   RFRG+  H+FLA+G  VF++N +W +AGLANG V EV+HM W   + PP  P  ++VR+ENYRG              G + L N+ PI P++  D+QPPT   RRG         RC R Q+PL LAF ITI+ S G +L R ++DIG  E++DGQ+FTA SR R+L  +LLE    ER   IG+SRSF  RL
Sbjct:    2 QTIHGGFRIPVVQ--SNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDILGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGARPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVHNIVWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQYFEQPLRRDWADGEIDLTNLCPIAPMDVMDDQPPTG-RRRGDG---TSIARCFRMQLPLMLAFGITIYKSHGNTLLRCSLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLKIGDSRSFQSRL 417          
BLAST of mRNA_P-littoralis_Contig61.89.1 vs. uniprot
Match: A0A6H5KFJ0_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ0_9PHAE)

HSP 1 Score: 340 bits (871), Expect = 4.730e-101
Identity = 175/336 (52.08%), Postives = 229/336 (68.15%), Query Frame = 1
Query:   16 LRLIMTGTAGTGKTVAIREMVRRIGRYRFLLLAPTGNASCAIGGQTLHSGLIIPLSSRGQRRGADPSDLSAPSREDLQQRLRKVEFILVDELSMIAQGIPGLMSIRCK-ALEGLPGSHAR--QQGLCGGMNVILVGDSMQLPPVGAAPVWNPTSASDGHIIEGYQAWTHLNAAVELTEVRRQEGDDQASFWQVLSHVA*GCVVHADWQVLLGTMRSGRTVEEAGAFDEAVHIFPTNARADDWN*ERLQLFGTSVARINAGHTLPGFR-LRLGRFRGMAPHLFLAVGF*VFINNNIWTAAGLANGGVAEVIHMHWPADRAPPLQPHGLFVRMENYRG 1011
            LRL++TGTAGTGKTV IREMVR +G+ RF+L+APTGNA+CAIGG T+H G  IP+      R +DPS ++  +  DLQ+R+ +V+FILVDE SM+ Q + GLMS R K A+EG  G      +Q + GG+++ILVGD  QLPPVGA+P+W    ++ G  ++G QAW  +N AVELT+V RQ+G +QA+F   L  +A G     DW VL     +     E   FD+AVHIFPTNA ADDWN  RL   GT +ARINA HT+ G+  +   RFRG+  H+FLA+G  VF+NNN+W +AGLANG V EV+HM W   + PP  P  ++VR+ENYRG
Sbjct: 1103 LRLLLTGTAGTGKTVVIREMVRLVGQQRFILMAPTGNAACAIGGMTIHGGFRIPVVQ--SNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVNNNVWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRG 1436          
BLAST of mRNA_P-littoralis_Contig61.89.1 vs. uniprot
Match: A0A6H5KGT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGT1_9PHAE)

HSP 1 Score: 233 bits (593), Expect = 1.420e-67
Identity = 127/261 (48.66%), Postives = 159/261 (60.92%), Query Frame = 1
Query:  622 DWQVLLGTMRSGRTVEEAGAFDEAVHIFPTNARADDWN*ERLQLFGTSVARINAGHTLPGFR-LRLGRFRGMAPHLFLAVGF*VFINNNIWTAAGLANGGVAEVIHMHWPADRAPPLQPHGLFVRMENYRGDH------------GPVSLRNIVPIVPIEATDEQPPTAISRRGRAPRNNCPGRCVRRQVPLTLAFAITIHTSRGQSLSRAAVDIGRREQTDGQTFTALSRVRSLCGLLLEDADFERIAHIGNSRSFGRRL 1365
            DW VL     +     E   FD+AVHIFPTNA ADDWN  RL   GT +ARINA HT+ G+  +   RFRG+  H+FLA+G  VF+NNN W +AGLANG V EV+HM W   + PP  P  ++VR+ENYRG              G + L N+ PI P++  D+QPPT   RRG         RC R Q+PL LAF ITI+ S+G +L R  +DIG  E++DGQ+FTA SR R+L  +LLE    ER   IG+SRSF  RL
Sbjct:    6 DWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVNNNNWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQYFEQPLRRDWADGEIDLTNLCPIAPMDVMDDQPPTG-RRRGDG---TSIARCFRMQLPLMLAFGITIYKSQGNTLLRCFLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLKIGDSRSFQSRL 262          
BLAST of mRNA_P-littoralis_Contig61.89.1 vs. uniprot
Match: UPI000A2A83DD (uncharacterized protein LOC110235051 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A83DD)

HSP 1 Score: 223 bits (569), Expect = 2.450e-60
Identity = 158/458 (34.50%), Postives = 238/458 (51.97%), Query Frame = 1
Query:    1 NRSEALRLIMTGTAGTGKTVAIREMVRRIGRYRFLLLAPTGNASCAIGGQTLHSGLIIPLSSRGQRRGADPSDLSAPSREDLQQRLRKVEFILVDELSMIAQGIPGLMSIRCKALEGLPGSHARQQGLCGGMNVILVGDSMQLPPVGAAPVWNPTSASDGHIIEGYQAWTHLNAAVELTEVRRQEGD--DQASFWQVLSHVA*GCVVHADWQVLLGTMRSGRTVEEAGAFDEAVHIFPTNARADDWN*ERLQLFGTSVARINAGHTLPGFR-LRLGRFRGMAPHLFLAVGF*VFINNNIWTAAGLANGGVAEVIHMHWPADRAPPLQPHGLFVRMENYRGDHGPVSLRNIVPIVPIEATDEQPPTAISRRGRAPRNNCPGRCVRRQVPLTLAFAITIHTSRGQSLSRAAVDIGRREQTDGQTFTALSRVRSLCGLLLEDADFERIAHIGNSRSFGRRL 1365
            N  E L LI+ G AGTGK+  I  + R + + +  + A TG AS  I G T+HS L +P+  RG +      +LS  S   LQ  L+ +E+IL+DE SM+ Q   G +  RCK  + +         + GG++VIL+GD  QLPPV   P+++    S+    +GY A+   + AV+LT  +R  G   +Q  F  +L  +  G     DWQ+LL   R   +VE    F+ A  +F +N     +N E+L       A INA H+    + L      G+ P L+LA G  V +  N+W + GL NG    VI + +     PP  P  + V+ ++YRG      L++ VPI PI A+ +                  G   R+Q+PL LA+A+TIH S+G +L++A VDIG+ E+T G ++ A+SRV++L  L+LE   FER+  + +S +   RL
Sbjct:  949 NDKEPLCLIIIGVAGTGKSYLINAL-RNLLQNKCAVTATTGKASYNIRGVTIHSLLKLPVGPRGNK------ELSGQSLSRLQDNLKDIEYILIDEYSMLGQTTLGWIDKRCKQAKAI------YNRIFGGLSVILIGDPGQLPPVADKPLYH-AQPSNPIGEQGYLAYKMFDMAVKLTVNQRVHGTSYEQQQFRDLLLRLRKGESTKEDWQLLL--TRQPCSVENIADFNNATRLFYSNDEVSSYNHEQLNKLQQPCANINARHSSTTAKNLPSDELSGLEPVLYLAKGAKVMLTMNLWASVGLCNGATGTVIDIIYELGHMPPDLPIAVIVKFDDYRGPAFIEELQSCVPICPITASAQL---------------FEGVHERQQLPLRLAYALTIHKSQGLTLAKAWVDIGKSEKTPGVSYVAISRVKTLSSLVLEPMTFERLTSVKSSATLHYRL 1375          
BLAST of mRNA_P-littoralis_Contig61.89.1 vs. uniprot
Match: UPI000A2A6B3A (uncharacterized protein LOC110247455 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A6B3A)

HSP 1 Score: 216 bits (551), Expect = 1.680e-59
Identity = 153/458 (33.41%), Postives = 237/458 (51.75%), Query Frame = 1
Query:    1 NRSEALRLIMTGTAGTGKTVAIREMVRRIGRYRFLLLAPTGNASCAIGGQTLHSGLIIPLSSRGQRRGADPSDLSAPSREDLQQRLRKVEFILVDELSMIAQGIPGLMSIRCKALEGLPGSHARQQGLCGGMNVILVGDSMQLPPVGAAPVWNPTSASDGHIIEGYQAWTHLNAAVELTEVRRQEGD--DQASFWQVLSHVA*GCVVHADWQVLLGTMRSGRTVEEAGAFDEAVHIFPTNARADDWN*ERLQLFGTSVARINAGHT-LPGFRLRLGRFRGMAPHLFLAVGF*VFINNNIWTAAGLANGGVAEVIHMHWPADRAPPLQPHGLFVRMENYRGDHGPVSLRNIVPIVPIEATDEQPPTAISRRGRAPRNNCPGRCVRRQVPLTLAFAITIHTSRGQSLSRAAVDIGRREQTDGQTFTALSRVRSLCGLLLEDADFERIAHIGNSRSFGRRL 1365
            N  E L LI+ G AGTGK+  I  + R + + +  + A TG AS  I G T+HS L +P+  RG +      DLS  +   LQ++L ++E+IL+DE SM+ Q   G +  RCK   G    H +  G   GM++IL+GD  QLPPV   P+++    S+    +GY  +   +  V+LT  +R +G   +Q  F ++L  +  G     DW++LL   R    +E    F++A  +F +N     +N ++L       A INA H+ +    L      G+ P + +A G  V +  N+W + GL NG    V+ + +  D  PP  P  + VR +NY+G      L   VPI PI  + +                  G   R+Q+PL LA+A+TIH S+G +LS+A +DIG+ E+T G ++ A+SRV++L  L++E   FER+  I +S +   RL
Sbjct:  270 NDKEPLCLIIIGVAGTGKSYLINAL-RSLLQNKCSVTATTGKASFNIQGITVHSLLKLPVGPRGAK------DLSGQTLSRLQEKLNEIEYILIDEYSMLGQTTFGWIDKRCKQATGF---HDKVHG---GMSMILIGDPGQLPPVVDKPLYH-AQPSNPIGEQGYLTYQMFDKVVKLTANQRVQGSSSEQQQFRELLLRLRKGESTVQDWKLLL--TRQPSCIENISEFNDATRLFYSNDEVSAYNLDQLTKLMEPCANINARHSSVTAKSLPSDEMSGLQPSISIAKGAKVMLTMNLWASVGLCNGATGTVVDIIYAVDHRPPDLPIAVIVRFDNYQGPSLREDLPMCVPICPITVSAQA---------------LEGVQERQQLPLKLAYALTIHKSQGLTLSKAWIDIGKSEKTPGISYVAISRVKTLSSLVIEPMTFERLTAIKSSTTLHYRL 696          
BLAST of mRNA_P-littoralis_Contig61.89.1 vs. uniprot
Match: A0A6H5KDM0_9PHAE (ATP-dependent DNA helicase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDM0_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 1.740e-59
Identity = 108/224 (48.21%), Postives = 146/224 (65.18%), Query Frame = 1
Query:   73 MVRRIGRYRFLLLAPTGNASCAIGGQTLHSGLIIPLSSRGQRRGADPSDLSAPSREDLQQRLRKVEFILVDELSMIAQGIPGLMSIRCK-ALEGLPGSHAR--QQGLCGGMNVILVGDSMQLPPVGAAPVWNPTSASDGHIIEGYQAWTHLNAAVELTEVRRQEGDDQASFWQVLSHVA*GCVVHADWQVLLGTMRSGRTVEEAGAFDEAVHIFPTNARADDWN 735
            MV+ +G+ RF+L+APTGNA+CAIGG T+H G  IP+      R +DPS ++  +  DLQ+R+ +V+FILVDE SM+ Q + GLMS R K A+EG  G      +Q + GG+++ILVGD   LPPVGA+P+W    ++ G  ++G QAW  +N AVELT+V RQ+G +QA+F   L  +A G     DW VL     +     E   FD+AVHIFPTNA ADDWN
Sbjct:    1 MVKLVGQQRFILMAPTGNAACAIGGMTIHGGFRIPVVQ--SNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAHLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWN 222          
BLAST of mRNA_P-littoralis_Contig61.89.1 vs. uniprot
Match: A0A6S7H188_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7H188_PARCT)

HSP 1 Score: 219 bits (558), Expect = 5.870e-59
Identity = 154/456 (33.77%), Postives = 243/456 (53.29%), Query Frame = 1
Query:   10 EALRLIMTGTAGTGKTVAIREMVRRIGRYRFLLLAPTGNASCAIGGQTLHSGLIIPLSSRGQRRGADPSDLSAPSREDLQQRLRKVEFILVDELSMIAQGIPGLMSIRCKALEGLPGSHARQQGLCGGMNVILVGDSMQLPPVGAAPVWNPTSASD-GHIIEGYQAWTHLNAAVELTEVRRQEG--DDQASFWQVLSHVA*GCVVHADWQVLLGTMRSGRTVEEAGAFDEAVHIFPTNARADDWN*ERLQLFGTSVARINAGHTLP-GFRLRLGRFRGMAPHLFLAVGF*VFINNNIWTAAGLANGGVAEVIHMHWPADRAPPLQPHGLFVRMENYRGDHGPVSLRNIVPIVPIEATDEQPPTAISRRGRAPRNNCPGRCVRRQVPLTLAFAITIHTSRGQSLSRAAVDIGRREQTDGQTFTALSRVRSLCGLLLEDADFERIAHIGNSRSFGRRL 1365
            E L LI+ G AGTGK+  I   +R + + +  + A TG A+  I G T+HS L +P+ SRG+      +DL+  S   LQ+ L  VE+I++DE SM+ Q   G +  RCK   G          + GG ++IL GD  QLPPV   P+++   +SD G   +GYQ +   + AV+LT  +R +G   +Q  F  +L  +  G     DW++LL   R    +     F++A  +F +N +  ++N ++L      VA INA H+     ++      G+ P +FLA G  V +  N+W++ GL NG    VI   + ++  PP  P G+ ++ +NYRG     +  + VPI PI        T  S+ G        G   R+Q+PL LA+A+TIH S+G +LS+A +DIG+ E+T G ++ A+SRV++L   ++E   +ER+  + +S +   RL
Sbjct:  742 EPLCLIVIGVAGTGKSYLINA-IRNLLQAKCAVTATTGKAAFNIRGITIHSLLKLPIGSRGK------NDLTGLSLCRLQENLNSVEYIIIDEYSMLGQVTFGWVDKRCKQATGC------YNKVLGGKSLILFGDPGQLPPVADKPLYHAKPSSDVGE--QGYQTYRMFDKAVKLTVNQRVQGMNSEQVRFRDLLLRLRKGESTVDDWKLLL--TRQPSAITNLSEFEDATRLFYSNEQVANYNHDQLSKLEQPVAHINARHSSAIAKKIASEDMSGLEPVVFLAKGAKVMLTMNLWSSVGLCNGATGTVIDFIFQSNHRPPDLPVGVIIQFDNYRGPSFDATQPSCVPICPI--------TVSSQSGN-------GFHERQQLPLRLAWALTIHKSQGLTLSKAWIDIGKSERTAGVSYVAISRVKTLSSCVIEPMTYERLTSLKSSANLQFRL 1165          
BLAST of mRNA_P-littoralis_Contig61.89.1 vs. uniprot
Match: UPI00109BC70A (uncharacterized protein LOC110236158 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BC70A)

HSP 1 Score: 219 bits (558), Expect = 7.530e-59
Identity = 151/452 (33.41%), Postives = 237/452 (52.43%), Query Frame = 1
Query:   10 EALRLIMTGTAGTGKTVAIREMVRRIGRYRFLLLAPTGNASCAIGGQTLHSGLIIPLSSRGQRRGADPSDLSAPSREDLQQRLRKVEFILVDELSMIAQGIPGLMSIRCKALEGLPGSHARQQGLCGGMNVILVGDSMQLPPVGAAPVWNPT-SASDGHIIEGYQAWTHLNAAVELTEVRRQEGDD--QASFWQVLSHVA*GCVVHADWQVLLGTMRSGRTVEEAGAFDEAVHIFPTNARADDWN*ERLQLFGTSVARINAGH-TLPGFRLRLGRFRGMAPHLFLAVGF*VFINNNIWTAAGLANGGVAEVIHMHWPADRAPPLQPHGLFVRMENYRGDHGPVSLRNI---VPIVPIEATDEQPPTAISRRGRAPRNNCPGRCVRRQVPLTLAFAITIHTSRGQSLSRAAVDIGRREQTDGQTFTALSRVRSLCGLLLEDADFERIAHIGNS 1344
            E L +I+ G AGTGK+  I  +   + +   ++ A TG AS  + G T+HS L +P++S   +      DLS     +LQ++L+ V++IL+DE SM+ Q   G +  RC+   G      + + L GG ++IL+GD  QLPPV   P+++   S + G   +GY A+   N+ + LT+ +R +G D  Q  F  +L H+  GC+  +DW VLL   R   ++     F +   +F +N     +N  +L+     +A+I A H T+   ++      G+ P LFLA G  V + NN+WT+ GL NG    V+ + +  D  PP  P  + V+ E+Y G     SL N    VPI PI A  +    +I  R              +Q+PL LA+A+TIH S+G +L +  +DIG+RE + G ++ A+SR R L  L++E    ER+ +I  S
Sbjct: 1299 EPLLMIINGEAGTGKSYLINAIQCYL-KELCVVTATTGKASFNVNGITIHSLLKLPVASYSHK------DLSGHPLLNLQEKLKSVQYILIDEYSMLGQTTFGWIDRRCRQASG------KNEQLFGGKSIILIGDPAQLPPVADKPLYHSVPSTAIGE--QGYLAYRMFNSVILLTDNQRVQGSDSEQRIFRDLLKHIRNGCISTSDWNVLL--TRQPTSITNLDEFKDVTRLFYSNEEVGKYNFSKLEELKHPIAKIEARHSTIKAKKISPQELFGLEPLLFLAKGAVVMLTNNLWTSVGLCNGAKGTVMDIIYHPDHKPPSLPIAVVVKFESYSGP----SLDNFPSCVPIPPITACVD----SIHER--------------QQIPLRLAWALTIHKSQGLTLDKTWIDIGKRETSLGTSYVAISRTRKLSSLVIEPMTLERLLNINKS 1711          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig61.89.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K558_9PHAE3.300e-13649.79ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K692_9PHAE9.310e-12448.57ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KDL6_9PHAE6.960e-11446.92ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KFJ0_9PHAE4.730e-10152.08ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KGT1_9PHAE1.420e-6748.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI000A2A83DD2.450e-6034.50uncharacterized protein LOC110235051 n=1 Tax=Exaip... [more]
UPI000A2A6B3A1.680e-5933.41uncharacterized protein LOC110247455 n=1 Tax=Exaip... [more]
A0A6H5KDM0_9PHAE1.740e-5948.21ATP-dependent DNA helicase (Fragment) n=1 Tax=Ecto... [more]
A0A6S7H188_PARCT5.870e-5933.77ATP-dependent DNA helicase n=1 Tax=Paramuricea cla... [more]
UPI00109BC70A7.530e-5933.41uncharacterized protein LOC110236158 n=1 Tax=Exaip... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig61contigP-littoralis_Contig61:524024..525619 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog5507.FOXG_14222P0
PFAMsHelitron_like_N,MULE,PIF1
Model size1365
Max annot lvl4751|Fungi
KEGG koko:K15255
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.61e-19
EggNOG OGsCOG0507@1|root,KOG0987@2759|Eukaryota,39RYU@33154|Opisthokonta,3P64X@4751|Fungi,3QU0F@4890|Ascomycota,21AWX@147550|Sordariomycetes,3TKC2@5125|Hypocreales,1FXW4@110618|Nectriaceae
EC3.6.4.12
DescriptionConserved hypothetical protein
Cds size576
COG categoryD
BRITEko00000,ko01000,ko03029,ko03032
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791271.1549673-UTR-P-littoralis_Contig61:524023..5240501680791271.1549673-UTR-P-littoralis_Contig61:524023..524050Pylaiella littoralis U1_48UTRP-littoralis_Contig61 524024..524050 +
1680791271.1995008-UTR-P-littoralis_Contig61:524818..5252311680791271.1995008-UTR-P-littoralis_Contig61:524818..525231Pylaiella littoralis U1_48UTRP-littoralis_Contig61 524819..525231 +
1680791271.2120516-UTR-P-littoralis_Contig61:525270..5256191680791271.2120516-UTR-P-littoralis_Contig61:525270..525619Pylaiella littoralis U1_48UTRP-littoralis_Contig61 525271..525619 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791271.170044-CDS-P-littoralis_Contig61:524050..5241731680791271.170044-CDS-P-littoralis_Contig61:524050..524173Pylaiella littoralis U1_48CDSP-littoralis_Contig61 524051..524173 +
1680791271.1822777-CDS-P-littoralis_Contig61:524365..5248181680791271.1822777-CDS-P-littoralis_Contig61:524365..524818Pylaiella littoralis U1_48CDSP-littoralis_Contig61 524366..524818 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig61.89.1prot_P-littoralis_Contig61.89.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig61 524051..524818 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig61.89.1

>prot_P-littoralis_Contig61.89.1 ID=prot_P-littoralis_Contig61.89.1|Name=mRNA_P-littoralis_Contig61.89.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=192bp
MTGTAGTGKTVAIREMVRRIGRYRFLLLAPTGNASCAIGGQTLHSGLIIP
LSSRGQRRGADPSDLSAPSREDLQQRLRKVEFILVDELSMIAQGIPGLMS
IRCKALEGLPGSHARQQGLCGGMNVILVGDSMQLPPVGAAPVWNPTSASD
GHIIEGYQAWTHLNAAVELTEVRRQEGDDQASFWQVLSHVA*
back to top

mRNA from alignment at P-littoralis_Contig61:524024..525619+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig61.89.1 ID=mRNA_P-littoralis_Contig61.89.1|Name=mRNA_P-littoralis_Contig61.89.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1596bp|location=Sequence derived from alignment at P-littoralis_Contig61:524024..525619+ (Pylaiella littoralis U1_48)
AACAGGAGTGAAGCCCTACGACTGATCATGACGGGGACGGCGGGCACAGG GAAGACAGTCGCCATCCGAGAGATGGTCAGGAGGATTGGCCGCTACCGAT TCCTCTTACTGGCGCCGACGGGGAACGCTTCCTGTGCGATTGGTGGACAG GTGTGATCGCGTGCATCACTTTTCCGTGTCCTTCCTTGCCTACACGAATA CGTACATGTAAATGTAGACATGCTTTTGGTGGACATGCGTGTACGTCATT TTCGTCATCATCACCACGGTTGACATGCACCGTACCAATCAGACCCCTCC GTCGTGTACTCTTCTCGCCTCGCGGACGCATGTCTACCTTAGACCTTGCA CAGTGGCCTCATCATCCCCCTTTCGTCGCGTGGGCAACGGAGAGGTGCCG ACCCCAGCGACTTGTCAGCCCCGAGCCGCGAAGACCTGCAGCAACGACTT CGCAAGGTAGAATTCATCCTTGTCGACGAACTCTCCATGATCGCGCAGGG CATTCCGGGTCTCATGAGCATCCGCTGCAAAGCCCTCGAAGGCCTCCCTG GAAGCCACGCTCGGCAGCAGGGCCTCTGCGGCGGGATGAACGTCATCCTC GTTGGTGATTCCATGCAGCTGCCGCCGGTGGGTGCAGCGCCGGTATGGAA CCCCACCTCCGCCAGCGACGGGCATATCATCGAAGGCTACCAGGCGTGGA CTCACCTCAACGCCGCAGTCGAGCTTACGGAGGTGCGGCGTCAGGAGGGC GACGATCAGGCATCTTTCTGGCAAGTCCTCAGCCACGTTGCGTAGGGCTG CGTCGTGCACGCAGATTGGCAGGTGTTGCTGGGTACCATGCGCAGCGGGA GGACTGTCGAGGAGGCGGGCGCCTTTGACGAGGCCGTCCACATCTTCCCC ACCAACGCCCGGGCAGACGATTGGAACTAGGAACGGCTACAGCTCTTCGG CACCTCGGTCGCGCGCATCAACGCCGGGCACACACTACCTGGGTTCAGAC TCCGTTTGGGCCGTTTCAGGGGTATGGCGCCCCACCTCTTCCTCGCTGTT GGCTTCTGAGTCTTCATCAACAACAACATTTGGACGGCGGCTGGCCTCGC CAACGGAGGTGTCGCCGAAGTGATTCACATGCACTGGCCGGCTGATAGAG CGCCCCCGCTGCAGCCCCACGGTCTCTTCGTCCGAATGGAGAACTACCGC GGCGACCAGTACTTCCAACACGTGAAGGTGAACGTCGATATTGGAAGTGG GCCTGTCAGCCTCCGAAATATCGTACCTATCGTGCCCATCGAAGCCACAG ACGAACAGCCTCCGACGGCGATCAGCAGGCGGGGCCGCGCTCCACGGAAC AATTGCCCGGGTCGCTGTGTCAGGAGACAGGTGCCCCTCACCCTCGCCTT TGCCATCACCATCCACACAAGCCGAGGTCAGTCCCTATCGAGAGCTGCTG TCGACATCGGCCGGCGCGAGCAAACCGACGGGCAGACCTTCACCGCCTTA AGCCGTGTGCGGTCGTTGTGCGGCCTGCTGTTGGAGGACGCCGACTTCGA GCGTATAGCCCACATTGGCAACAGCAGGAGCTTTGGCCGGCGTCTA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig61:524024..525619+

>mRNA_P-littoralis_Contig61.89.1 ID=mRNA_P-littoralis_Contig61.89.1|Name=mRNA_P-littoralis_Contig61.89.1|organism=Pylaiella littoralis U1_48|type=CDS|length=576bp|location=Sequence derived from alignment at P-littoralis_Contig61:524024..525619+ (Pylaiella littoralis U1_48)
ATGACGGGGACGGCGGGCACAGGGAAGACAGTCGCCATCCGAGAGATGGT
CAGGAGGATTGGCCGCTACCGATTCCTCTTACTGGCGCCGACGGGGAACG
CTTCCTGTGCGATTGGTGGACAGACCTTGCACAGTGGCCTCATCATCCCC
CTTTCGTCGCGTGGGCAACGGAGAGGTGCCGACCCCAGCGACTTGTCAGC
CCCGAGCCGCGAAGACCTGCAGCAACGACTTCGCAAGGTAGAATTCATCC
TTGTCGACGAACTCTCCATGATCGCGCAGGGCATTCCGGGTCTCATGAGC
ATCCGCTGCAAAGCCCTCGAAGGCCTCCCTGGAAGCCACGCTCGGCAGCA
GGGCCTCTGCGGCGGGATGAACGTCATCCTCGTTGGTGATTCCATGCAGC
TGCCGCCGGTGGGTGCAGCGCCGGTATGGAACCCCACCTCCGCCAGCGAC
GGGCATATCATCGAAGGCTACCAGGCGTGGACTCACCTCAACGCCGCAGT
CGAGCTTACGGAGGTGCGGCGTCAGGAGGGCGACGATCAGGCATCTTTCT
GGCAAGTCCTCAGCCACGTTGCGTAG
back to top