prot_P-littoralis_Contig61.70.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig61.70.1
Unique Nameprot_P-littoralis_Contig61.70.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length564
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig61.70.1 vs. uniprot
Match: A0A6H5K1P9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1P9_9PHAE)

HSP 1 Score: 231 bits (589), Expect = 1.020e-61
Identity = 308/633 (48.66%), Postives = 326/633 (51.50%), Query Frame = 0 
Query:    1 MGGGPRPGFSPHGAPMPMNVSP------------RLGGHMPHGG-HSMPFPGGFRPGQPG-QNHNPLQLPRGGGPRGTA------PQGSHGYGASPAMGPTLPSQPPQGPGQQAEWAAARQXXXXXXXXXXXXXWRNTPGVPAA--GGPGP--GLRQHSHQQHH-----QHRGGPSAPPSGAPVPWGDSWGA--GGGGPRPNAPEVVDGPAASPRALAQXXXXXXXXXXXXXXXXXXXXXXXHQXXXXXXXXHRPEVTAAASTVSTLATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTPSLPSAVPGSSGDADDISLAMQNGELSAAARVFVPTNISPAKPPSKGVASGGSTPVGRSGAAGATPXXXXXXXXXGSSPALLRSSPTK------------------GAGGGAGGSLGLPLADGVFGPSWGGMGGVGGSANKGASSRADASEDGGGSSSSNLWGSLGIDVGGAGVPASGQAIWGSSSLLDSVGGXXXXXXX--------AGDGVSLLLAPSTGSAVQAPVDAASLPSFSSSSPLDLSSWDVVGGGGXXGVRGASAGALAGD--VGGLPSPLSGLSMDGSASKLVGGKVGDQPQRRG-----------FGSAASGLSSWG 563
            MG  P P FSPHG P P                  L GHM H G   MPFP G+R G PG  NH                     PQ S                      QQAEWAAARQ               N P VPAA  GGPGP  GLRQH  Q        QH GG   PP+GAP PWGD W A  GGGGPRPNA E  + PA     LAQ XXXXXXXXXXXXXXXXXXXXXX  XXXXXXXX                  XXXXXXXXXXXXXXXXXXXX             +TPSL  + PGS GDADDISLA+QNGELSAAA+ FVP NISPAKP     ++GG TPV R GAA A               A+ R++ T                               PLAD  FG SWG MG                         SNLWGSLGIDVGGAGVP SGQAIWGSSSLLDSVGG   XXXX        AGDG+SLLL PS  S VQAP DA SLP FSSS PLDL+SW V       G RG  AGALAGD  VGGL S LSGLSMD SAS ++GGK G+QPQ              FGSA+S LSSWG
Sbjct: 1034 MGPTPSPRFSPHG-PRPSXXXXXXXXXXXXXXPSHLVGHMLHRGPQPMPFPRGYRQGPPGGPNHXXXXXXXXXXXXXXXXXXXXXPQQSXXXXXXXXX--XXXXXXXXXXXQQAEWAAARQRAAAIASGWS----NNAPSVPAAAGGGPGPVPGLRQHPRQHQXXXXXXQHPGGTLDPPAGAPAPWGDPWSAANGGGGPRPNAQEGRNSPALPRGGLAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSQHAAPP----RTPSLTPSSPGSPGDADDISLAVQNGELSAAAQEFVP-NISPAKP---ATSTGGGTPVSRPGAAAARSAGVETPT------AVARAAQTPPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLADVAFGSSWGSMGXXXXXXXXXXXXXXXXXXX-XXXXXSNLWGSLGIDVGGAGVPPSGQAIWGSSSLLDSVGGDGGXXXXXXXXXXAIAGDGLSLLLGPSNVSTVQAPADATSLPPFSSSCPLDLASWGV-------GRRGG-AGALAGDEFVGGLASSLSGLSMDDSASGVLGGKAGEQPQXXXXXXXXXXXGGVFGSASS-LSSWG 1635
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig61.70.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K1P9_9PHAE1.020e-6148.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..373
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..239
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 533..563
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 260..281

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig61contigP-littoralis_Contig61:439257..442051 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig61.70.1mRNA_P-littoralis_Contig61.70.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig61 439055..442107 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig61.70.1 ID=prot_P-littoralis_Contig61.70.1|Name=mRNA_P-littoralis_Contig61.70.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=564bp
MGGGPRPGFSPHGAPMPMNVSPRLGGHMPHGGHSMPFPGGFRPGQPGQNH
NPLQLPRGGGPRGTAPQGSHGYGASPAMGPTLPSQPPQGPGQQAEWAAAR
QRAAAAAAAAGGGGWRNTPGVPAAGGPGPGLRQHSHQQHHQHRGGPSAPP
SGAPVPWGDSWGAGGGGPRPNAPEVVDGPAASPRALAQQQQQQANNMQQQ
QRRRQPQQQQQHQQQQQQHQQHRPEVTAAASTVSTLATAVAPTRAAAAPA
PAAPAPAPAQQATTMVTTTTPRQTPSLPSAVPGSSGDADDISLAMQNGEL
SAAARVFVPTNISPAKPPSKGVASGGSTPVGRSGAAGATPPRPPPAAALG
SSPALLRSSPTKGAGGGAGGSLGLPLADGVFGPSWGGMGGVGGSANKGAS
SRADASEDGGGSSSSNLWGSLGIDVGGAGVPASGQAIWGSSSLLDSVGGG
GGGGSSAGDGVSLLLAPSTGSAVQAPVDAASLPSFSSSSPLDLSSWDVVG
GGGGGGVRGASAGALAGDVGGLPSPLSGLSMDGSASKLVGGKVGDQPQRR
GFGSAASGLSSWG*
back to top