mRNA_P-littoralis_Contig61.13.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig61.13.1 vs. uniprot
Match: A0A6H5KJT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJT6_9PHAE) HSP 1 Score: 122 bits (307), Expect = 3.940e-28 Identity = 73/189 (38.62%), Postives = 113/189 (59.79%), Query Frame = 2
Query: 626 DPPEPA----KMSRMERIRASLSTQVS--GPAGDVDA---AEDRADVAEREFAAYMKEAAATNEAKFDLLKYWNERGVDGV-DQAGNVVAPARWPHLSLLARLYAGVDTTSCQAERNFSALKQVLSDMRAGTLPRKIEQMLLLRLNRHLIPDFAKVQRELAALKARHDANAKAAVAVQQAREGGTVTLN 1162
DP EPA K+SR+E RA+ S G +G V A A +R + ERE Y+ E F++L +WN RG D V GNV +PA P+L+ +ARL+ G++ +SCQAERNFSAL ++ +R L RK+E+M+L+RLNRHL+ + ++ ++ +A+ +A+ +VA Q+ R ++ L+
Sbjct: 80 DPVEPASKRKKLSRLEERRAARVAAASDGGASGSVQAQGSATNRRVLIEREVLVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVDEVRELDAAVSLARAKAAKSAQKSVACQEERANKSIDLS 268
BLAST of mRNA_P-littoralis_Contig61.13.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 122 bits (307), Expect = 5.930e-26 Identity = 73/189 (38.62%), Postives = 113/189 (59.79%), Query Frame = 2
Query: 626 DPPEPA----KMSRMERIRASLSTQVS--GPAGDVDA---AEDRADVAEREFAAYMKEAAATNEAKFDLLKYWNERGVDGV-DQAGNVVAPARWPHLSLLARLYAGVDTTSCQAERNFSALKQVLSDMRAGTLPRKIEQMLLLRLNRHLIPDFAKVQRELAALKARHDANAKAAVAVQQAREGGTVTLN 1162
DP EPA K+SR+E RA+ S G +G V A A +R + ERE Y+ E F++L +WN RG D V GNV +PA P+L+ +ARL+ G++ +SCQAERNFSAL ++ +R L RK+E+M+L+RLNRHL+ + ++ ++ +A+ +A+ +VA Q+ R ++ L+
Sbjct: 645 DPVEPASKRKKLSRLEERRAARVAAASDGGASGSVQAQGSATNRRVLIEREVLVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVDEVRELDAAVSLARAKAAKSAQKSVACQEERANKSIDLS 833
BLAST of mRNA_P-littoralis_Contig61.13.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 119 bits (298), Expect = 8.270e-25 Identity = 71/189 (37.57%), Postives = 107/189 (56.61%), Query Frame = 2
Query: 626 DPPEPA----KMSRMERIRASLSTQVSGPAGDVDAAEDRAD------VAEREFAAYMKEAAATNEAKFDLLKYWNERGVDGVDQA-GNVVAPARWPHLSLLARLYAGVDTTSCQAERNFSALKQVLSDMRAGTLPRKIEQMLLLRLNRHLIPDFAKVQRELAALKARHDANAKAAVAVQQAREGGTVTL 1159
DP EPA K+SR+E RA+ + + + ED++ + ERE Y+ E + F++L YWN RG D V G V +PA P+L+ +ARLY G++ TSCQAERNFSAL ++ +R LP K+E+M+ +RLNRHL+ + ++ + KA A++++A Q+ R TV L
Sbjct: 656 DPVEPAPKKKKLSRLEERRAARVAAATTGGDETGSLEDQSPSTTRRVLIEREVLVYLAENPQLDVDGFNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAEVRELDAAVVKAKAAKTKVAQSSMAAQEERANQTVDL 844
BLAST of mRNA_P-littoralis_Contig61.13.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 117 bits (293), Expect = 2.580e-24 Identity = 67/183 (36.61%), Postives = 104/183 (56.83%), Query Frame = 2
Query: 632 PEPAKMSRMERIRASLSTQVSGPAGDVDAAEDRAD------VAEREFAAYMKEAAATNEAKFDLLKYWNERGVDGVDQA-GNVVAPARWPHLSLLARLYAGVDTTSCQAERNFSALKQVLSDMRAGTLPRKIEQMLLLRLNRHLIPDFAKVQRELAALKARHDANAKAAVAVQQAREGGTVTL 1159
P+ K+SR+E RA+ + + + ED++ + ERE Y+ E + F++L YWN RG D V G V +PA P+L+ +ARLY G++ TSCQAERNFSAL ++ +R LP K+E+M+ +RLNRHL+ + ++ + KA A++++A Q+ R TV L
Sbjct: 467 PKKKKLSRLEERRAARVAAATTGGDETGSLEDQSPSTTRRVLIEREVLVYLAENPQLDVDGFNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAEVRELDAAVVKAKAAKTKVAQSSMAAQEERANQTVDL 649
BLAST of mRNA_P-littoralis_Contig61.13.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE) HSP 1 Score: 101 bits (251), Expect = 3.580e-19 Identity = 55/136 (40.44%), Postives = 81/136 (59.56%), Query Frame = 2
Query: 743 EREFAAYMKEAAATNEAKFDLLKYWNERGVDGV-DQAGNVVAPARWPHLSLLARLYAGVDTTSCQAERNFSALKQVLSDMRAGTLPRKIEQMLLLRLNRHLIPDFAKVQRELAALKARHDANAKAAVAVQQAREGG 1147
ERE Y+ E + F+L+ +WN RG + V G V APA P+L+ +ARL+ G++ TSCQAERNFSAL ++ +R L RK+E+M+L+RLNRHL+ + + +A +A +A + ARE G
Sbjct: 388 EREVLVYLAEQPQVDVDGFNLVGFWNRRGTNSVCPTTGKVTAPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGTLRCNMLARKVERMMLIRLNRHLLAEVRALDAAVAQARA---------MAAKSARESG 514
BLAST of mRNA_P-littoralis_Contig61.13.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 1.210e-18 Identity = 51/141 (36.17%), Postives = 83/141 (58.87%), Query Frame = 2
Query: 743 EREFAAYMKEAAATNEAKFDLLKYWNERGVDGVDQA-GNVVAPARWPHLSLLARLYAGVDTTSCQAERNFSALKQVLSDMRAGTLPRKIEQMLLLRLNRHLIPDFAKVQRELAALKARHDANAKAAVAVQQAREGGTVTLN 1162
ERE Y+ E + F+L+ +WN RG D V A G V +PA P+L+ +ARL+ G++ TSCQAERNFSAL ++ ++R LP ++E+M+L+RLNR ++ + ++ + NA + A Q+ R + ++
Sbjct: 402 EREMLVYLAEQPQLDVDGFNLIGFWNRRGTDSVRAATGQVTSPADMPYLAFIARLHLGIEATSCQAERNFSALAHLIGNLRCNMLPHRVERMMLIRLNRRMLDEVRAFDAAVSRAREMATKNAAKSAAAQEERANKPIDIS 542
BLAST of mRNA_P-littoralis_Contig61.13.1 vs. uniprot
Match: A0A6H5L7P7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7P7_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 1.390e-18 Identity = 46/98 (46.94%), Postives = 64/98 (65.31%), Query Frame = 2
Query: 743 EREFAAYMKEAAATNEAKFDLLKYWNERGVDGVDQA-GNVVAPARWPHLSLLARLYAGVDTTSCQAERNFSALKQVLSDMRAGTLPRKIEQMLLLRLN 1033
ERE Y+ E + F+LL +WN RG D V A G V +PA P+L+ +ARL+ G++ TSCQAERNFSAL ++ D R L ++E+M+L+RLN
Sbjct: 123 EREMLVYLAEQPQVDVDDFNLLGFWNRRGTDSVSAATGKVTSPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGDFRCNMLSHRVERMMLVRLN 220
BLAST of mRNA_P-littoralis_Contig61.13.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 1.610e-18 Identity = 52/141 (36.88%), Postives = 83/141 (58.87%), Query Frame = 2
Query: 743 EREFAAYMKEAAATNEAKFDLLKYWNERGVDGVDQA-GNVVAPARWPHLSLLARLYAGVDTTSCQAERNFSALKQVLSDMRAGTLPRKIEQMLLLRLNRHLIPDFAKVQRELAALKARHDANAKAAVAVQQAREGGTVTLN 1162
ERE Y+ E + F+LL +WN RG D V A G V +PA P+L+ +ARL+ G++ TSCQAERNFSAL ++ D+ L ++E+M+L+RLN+HL+ + +A +A +A+ + Q+ R + ++
Sbjct: 506 EREMLVYLAEQPQVDVDDFNLLGFWNRRGTDSVSAATGKVTSPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGDLCCNMLSHRVERMMLVRLNKHLLAEVRAYDAAVAWARAMAANSAEKSAVAQEERANTAIDVS 646
BLAST of mRNA_P-littoralis_Contig61.13.1 vs. uniprot
Match: A0A6H5L902_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L902_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 3.580e-18 Identity = 54/143 (37.76%), Postives = 82/143 (57.34%), Query Frame = 2
Query: 734 DVAEREFAAYMKEAAATNEAKFDLLKYWNERGVDGVDQAGNVVAPARWPHLSLLARLYAGVDTTSCQAERNFSALKQVLSDMRAGTLPRKIEQMLLLRLNRHLIPDFAKVQRELAALKARHDANAKAAVAVQQAREGGTVTLN 1162
D ++E Y K AA +D+L +W + G +D GNVV+ A++P LS+LAR+Y +D+TSCQ+ER FS L V +++R +P ++E ++ LR N HLIP+ K+ L L A A +VQ A G V ++
Sbjct: 156 DRVQKEVDEYTKLPAAVPAKDYDVLGFWRDAGSPRLDPHGNVVSAAQFPILSMLARVYLCIDSTSCQSEREFSGLGFVYNNLRQAMVPDRVEMVMFLRSNPHLIPEINKLDNGLGKLLAAQAVGKAKAASVQAANAGEQVVVD 298
BLAST of mRNA_P-littoralis_Contig61.13.1 vs. uniprot
Match: A0A6H5L256_9PHAE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L256_9PHAE) HSP 1 Score: 90.9 bits (224), Expect = 7.500e-17 Identity = 57/162 (35.19%), Postives = 85/162 (52.47%), Query Frame = 2
Query: 617 GGGDPPEPAKMSRMERIRASLSTQV----------SGPAGDVDAAEDRADVAER---EFAAYMKEAAATNEAKFDLLKYWNERGVDGVDQAGNVVAPARWPHLSLLARLYAGVDTTSCQAERNFSALKQVLSDMRAGTLPRKIEQMLLLRLNRHLIPDFAKV 1063
G D P PA + RA ++T A A D+ V +R E Y K AA +D+L +W + G +D GNVV+ A++P LS+LAR+Y +D+TSCQ+ER FS L V +++R +P ++E ++ LR N HLIP+ K+
Sbjct: 102 GAADVPVPAAATPPPEKRARVATTAYERRQARKVQEAAAARTSARRDQPSVTDRVQKEVDEYTKLPAAVPAKDYDVLGFWRDAGSPRLDPHGNVVSAAQFPILSMLARVYLCIDSTSCQSEREFSGLGFVYNNLRQAMVPDRVEMVMFLRSNPHLIPEINKL 263 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig61.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig61.13.1 >prot_P-littoralis_Contig61.13.1 ID=prot_P-littoralis_Contig61.13.1|Name=mRNA_P-littoralis_Contig61.13.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=202bp MQAFFMENLNKPKISARAPSPTQWQAAREVISVLQDASLVSTQVQGGRHGback to top mRNA from alignment at P-littoralis_Contig61:134351..135842+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig61.13.1 ID=mRNA_P-littoralis_Contig61.13.1|Name=mRNA_P-littoralis_Contig61.13.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1492bp|location=Sequence derived from alignment at P-littoralis_Contig61:134351..135842+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig61:134351..135842+ >mRNA_P-littoralis_Contig61.13.1 ID=mRNA_P-littoralis_Contig61.13.1|Name=mRNA_P-littoralis_Contig61.13.1|organism=Pylaiella littoralis U1_48|type=CDS|length=606bp|location=Sequence derived from alignment at P-littoralis_Contig61:134351..135842+ (Pylaiella littoralis U1_48)back to top |