mRNA_P-littoralis_Contig116.24.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig116.24.2 vs. uniprot
Match: D7FWN8_ECTSI (Haloacid dehalogenase-like hydrolase family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWN8_ECTSI) HSP 1 Score: 470 bits (1209), Expect = 2.300e-160 Identity = 252/321 (78.50%), Postives = 268/321 (83.49%), Query Frame = 2
Query: 56 LQLTLTGLLLILSRGANGFAVTVRIGSSSSSSRFGPQYSTKSGVAFGAAAGEASSAAPIEAPEERHAR----EDLPQALIFDCDGVLADTERDGHRPAFNAAFKIKNLDCEWGVEQYGKLLSVGGGKERMTAHWDEVGWPDCAKTAAERSMLVKELHLLKTALFNQAVVDGEIPLRNGVIRLVDEAIYKKVPLAVCSTSNDKAVTNLVKTLMGKERLERIQIFAGDIVEKKKPNPDIYDLAKETMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTADEDFSAADQVTEELGEDGEASVSVTLATLGRIVRERASVA 1006
L L L G+L I+ A+GFA +++ S R+ + S +P+EA E EDLPQALIFDCDGVLADTERDGHRPAFN+AFKIKNLDCEW VE YGKLLSVGGGKERMTAHWDEVGWPDCAKTA ERS+LVKELHLLKTALFNQAVVDGEIPLR GVIRLVDEAIY+KVPLAVCSTSNDKAVTNLVKTLMGKERLER+QIFAGDIVEKKKPNPDIYDLAK+TMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYT DEDFSAADQVTEELGEDGEAS SVTLATLG I+RERAS A
Sbjct: 2 LGLALAGVLAIICGKADGFASPIKM-----SHRW------------------SGSTSPLEAVESSSTAGGQTEDLPQALIFDCDGVLADTERDGHRPAFNSAFKIKNLDCEWSVELYGKLLSVGGGKERMTAHWDEVGWPDCAKTADERSVLVKELHLLKTALFNQAVVDGEIPLRTGVIRLVDEAIYRKVPLAVCSTSNDKAVTNLVKTLMGKERLERMQIFAGDIVEKKKPNPDIYDLAKDTMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTGDEDFSAADQVTEELGEDGEASTSVTLATLGAILRERASAA 299
BLAST of mRNA_P-littoralis_Contig116.24.2 vs. uniprot
Match: A0A835Z3K7_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3K7_9STRA) HSP 1 Score: 325 bits (834), Expect = 3.050e-104 Identity = 166/240 (69.17%), Postives = 192/240 (80.00%), Query Frame = 2
Query: 266 LPQALIFDCDGVLADTERDGHRPAFNAAFKIKNLDCEWGVEQYGKLLSVGGGKERMTAHWDEVGWPDCAKTAAERSMLVKELHLLKTALFNQAVVDGEIPLRNGVIRLVDEAIYKKVPLAVCSTSNDKAVTNLVKTLMGKERLERIQIFAGDIVEKKKPNPDIYDLAKETMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTADEDFSAADQVTEELGEDGEASVSVTLATLGRIV 985
LPQALIFDCDGVLADTERDGHRPAFN AFK K +DC W V+ YGKLL VGGGKERMTAHWD+VGWP A++ LV+ELHLLKT LFN+A+V G+IPLR GV+RLVDEAI ++VPLAVCSTSN++AV+NLV TLMG+ER ER +IFAGD+V KKP PDIY+LA E + L P RV+V+EDS IGL AAK AGM CLVTKSSYT E+FS AD+V E L +DG+ V L LG IV
Sbjct: 29 LPQALIFDCDGVLADTERDGHRPAFNEAFKAKGIDCVWDVDLYGKLLEVGGGKERMTAHWDKVGWPLGITEKADKQALVQELHLLKTDLFNEAIVAGKIPLRPGVLRLVDEAIEQEVPLAVCSTSNERAVSNLVLTLMGRERYERFRIFAGDVVRAKKPQPDIYNLAAEALRLSPERVIVVEDSGIGLRAAKGAGMPCLVTKSSYTGGENFSLADEVVESL-DDGD----VDLQVLGNIV 263
BLAST of mRNA_P-littoralis_Contig116.24.2 vs. uniprot
Match: A0A7S2FPW0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FPW0_9STRA) HSP 1 Score: 323 bits (829), Expect = 2.570e-103 Identity = 163/231 (70.56%), Postives = 186/231 (80.52%), Query Frame = 2
Query: 275 ALIFDCDGVLADTERDGHRPAFNAAFKIKNLDCEWGVEQYGKLLSVGGGKERMTAHWDEVGWPDCAKTAAERSMLVKELHLLKTALFNQAVVDGEIPLRNGVIRLVDEAIYKKVPLAVCSTSNDKAVTNLVKTLMGKERLERIQIFAGDIVEKKKPNPDIYDLAKETMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTADEDFSAADQVTEELGEDGEASVSVTLA 967
A++FDCDGVLADTERDGHR AFN AFK NLD EW VE YG+LLSVGGGKERMTAHW++VGWP ++ R LVK LHL KT LFN+ + +G IPLR GV+R+VDEAI VPL VCSTSNDKAVTNLV TLMG ER +IQIFAGD+VEKKKP+PD+Y LAKETMGLD +VIEDSHIGL AAK AGMNCLVTKSSYTA+EDFS AD++ EELG++ SV +A
Sbjct: 53 AILFDCDGVLADTERDGHRVAFNTAFKENNLDTEWSVELYGELLSVGGGKERMTAHWNKVGWPAEYESDESRRELVKSLHLRKTDLFNEMICEGIIPLRPGVLRVVDEAISAGVPLGVCSTSNDKAVTNLVLTLMGPERRSKIQIFAGDVVEKKKPSPDVYLLAKETMGLDAGSTMVIEDSHIGLQAAKGAGMNCLVTKSSYTANEDFSVADKIVEELGDEPGVSVESLMA 283
BLAST of mRNA_P-littoralis_Contig116.24.2 vs. uniprot
Match: W7UBX2_9STRA (Protein cbby n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UBX2_9STRA) HSP 1 Score: 312 bits (800), Expect = 6.230e-99 Identity = 155/221 (70.14%), Postives = 177/221 (80.09%), Query Frame = 2
Query: 275 ALIFDCDGVLADTERDGHRPAFNAAFKIKNLDCEWGVEQYGKLLSVGGGKERMTAHWDEVGWPDCAKTAAERSMLVKELHLLKTALFNQAVVDGEIPLRNGVIRLVDEAIYKKVPLAVCSTSNDKAVTNLVKTLMGKERLERIQIFAGDIVEKKKPNPDIYDLAKETMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTADEDFSAADQVTEELGED 937
AL+FDCDGVLADTERDGHRP FN AFK K +DC W V YG LL VGGGKERMTAHW++VGWP + A+R LV+ELH+LKT LF + +G++PLR GV+R+VD AI VPL VCSTSNDKAV L++ LMG+ER+ QIFAGD+V KKKP PDIY LAKE MGLD R VVIEDSHIGLTAAKAAGM CLVTKSSYTA+EDF AAD+V EELG+D
Sbjct: 53 ALLFDCDGVLADTERDGHRPCFNLAFKEKGIDCTWDVVLYGNLLEVGGGKERMTAHWNKVGWPSGYDSDAKRQDLVRELHMLKTNLFMNYIEEGKLPLRPGVLRVVDAAIAAGVPLGVCSTSNDKAVRTLIRVLMGEERMSHFQIFAGDVVPKKKPWPDIYLLAKEQMGLDARRTVVIEDSHIGLTAAKAAGMKCLVTKSSYTANEDFRAADRVVEELGKD 273
BLAST of mRNA_P-littoralis_Contig116.24.2 vs. uniprot
Match: A0A7S1ZBJ4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZBJ4_TRICV) HSP 1 Score: 297 bits (760), Expect = 4.660e-93 Identity = 149/240 (62.08%), Postives = 181/240 (75.42%), Query Frame = 2
Query: 269 PQALIFDCDGVLADTERDGHRPAFNAAFKIKNLDCEWGVEQYGKLLSVGGGKERMTAHWDEVGWPDCAKTAAE-RSMLVKELHLLKTALFNQAVVDGEIPLRNGVIRLVDEAIYKKVPLAVCSTSNDKAVTNLVKTLMGKERLERIQIFAGDIVEKKKPNPDIYDLAKETMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTADEDFSAADQVTEELGEDGEASVSVTLATLGRIV 985
P+A++FDCDGVLADTERDGHRPAFN AF +D EWGVE+YG LL VGGGKERMTAHW+EVGWP E R VKELHL KT +F + +G IPLR GV+RLVDEAI V LA CSTSNDKAV NL+ TLMG +R + Q+FAGD+V+ KKP PD+Y++A E MGLD ++ V++ED+ IGL AAKAAG+ CLVTKS+Y EDF+ AD + +ELG+D E VTLATLG ++
Sbjct: 45 PEAILFDCDGVLADTERDGHRPAFNRAFAENQIDEEWGVERYGVLLEVGGGKERMTAHWNEVGWPSAMPDDEEGRQAKVKELHLQKTGIFMDMINEGAIPLRPGVLRLVDEAIENGVRLACCSTSNDKAVKNLIATLMGPDRAAKFQVFAGDMVKAKKPAPDVYNMAVEEMGLDKSKCVIVEDTDIGLGAAKAAGIKCLVTKSAYAEKEDFTGADLIVDELGDDPE--TGVTLATLGSLL 282
BLAST of mRNA_P-littoralis_Contig116.24.2 vs. uniprot
Match: A0A7S2V8N0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8N0_9STRA) HSP 1 Score: 296 bits (759), Expect = 8.020e-93 Identity = 155/248 (62.50%), Postives = 187/248 (75.40%), Query Frame = 2
Query: 266 LPQALIFDCDGVLADTERDGHRPAFNAAFKIKNLDCEWGVEQYGKLLSVGGGKERMTAHWDEVGWPDCAKTAAERSM--LVKELHLLKTALFNQAVVDGEIPLRNGVIRLVDEAIYKKVPLAVCSTSNDKAVTNLVKTLMGKERLERIQIFAGDIVEKKKPNPDIYDLAKETMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTADEDFSAADQVTEELGEDGEASVSVTLATLGRIVRERASV 1003
+P+A++FDCDGVLADTERDGHRPAFNA F+ + LD +W E YG+LL VGGGKERMTAHW+EVGWP + S LVKELHL KT FN+ + G IPLR GV+RLVDEAI V LAVCSTSN+KAV NLV TLMG+ER + Q F GD+V+KKKP PD+Y +AK++MGLD ++ ++IEDS IGL AAKA+GM CLVTKSSYT +EDFS AD V L +DG +VTL LG I+ E A+V
Sbjct: 47 VPEAILFDCDGVLADTERDGHRPAFNAVFEERRLDTDWTPELYGRLLEVGGGKERMTAHWNEVGWPSSVSLHDDESKATLVKELHLAKTDEFNKMIKSGAIPLREGVLRLVDEAISNNVSLAVCSTSNEKAVKNLVLTLMGEERYSKFQFFCGDMVKKKKPAPDVYLMAKDSMGLDASKTIIIEDSGIGLQAAKASGMKCLVTKSSYTENEDFSKADCVVSSL-DDG----NVTLEKLGNIL-EAATV 288
BLAST of mRNA_P-littoralis_Contig116.24.2 vs. uniprot
Match: A0A0G4EGM7_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EGM7_VITBC) HSP 1 Score: 292 bits (747), Expect = 9.860e-91 Identity = 149/232 (64.22%), Postives = 176/232 (75.86%), Query Frame = 2
Query: 269 PQALIFDCDGVLADTERDGHRPAFNAAFKIKNLDCEWGVEQYGKLLSVGGGKERMTAHWDEV--GWPDCAKTAAERSMLVKELHLLKTALFNQAVVDGEIPLRNGVIRLVDEAIYKKVPLAVCSTSNDKAVTNLVKTLMGKERLERIQIFAGDIVEKKKPNPDIYDLAKETMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTADEDFSAADQVTEELGEDGEASVSV 958
P ++FDCDGVLADTERD HRPAFN AF+ K D WGV+ YG LL VGGGKERMTA+W+E GWPD +T E++ LVKELHL KTA+FN + G++PLR GV R+VDEAI PLAVCSTS+DKAVTNLV L+G +R R +IFAGDIV KKKP+PDIY LA + M LDP++ +VIEDS IGL AAKAAGM C+VTKSSYT +EDFS AD V ELG+ VS+
Sbjct: 68 PFPILFDCDGVLADTERDAHRPAFNQAFREKGFDDVWGVDLYGHLLEVGGGKERMTAYWNEKEGGWPDGYRTPEEQAALVKELHLRKTAIFNDLINQGQVPLRPGVARIVDEAIAAGCPLAVCSTSSDKAVTNLVNVLLGPQRAPRFRIFAGDIVAKKKPSPDIYLLAAQQMNLDPSKCLVIEDSGIGLKAAKAAGMRCVVTKSSYTQNEDFSGADMVIAELGDPPHQCVSL 299
BLAST of mRNA_P-littoralis_Contig116.24.2 vs. uniprot
Match: A0A7R9WSC9_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WSC9_9STRA) HSP 1 Score: 291 bits (744), Expect = 3.700e-90 Identity = 143/234 (61.11%), Postives = 182/234 (77.78%), Query Frame = 2
Query: 272 QALIFDCDGVLADTERDGHRPAFNAAFKIKNLDCEWGVEQYGKLLSVGGGKERMTAHWDEVGWPDCAKTAAERSMLVKELHLLKTALFNQAVVDGEIPLRNGVIRLVDEAIYKKVPLAVCSTSNDKAVTNLVKTLMGKERLERIQIFAGDIVEKKKPNPDIYDLAKETMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTADEDFSAADQVTEELGEDGEASVSVTLATL 973
+A+++D DGVLADTERD HRPAFN AF+ NL+ +W VE+YGKLL VGGGKERMTAHW+EVGWP +R VKELHL KT +F + G +PLR GV+R++D+AI + LAVCSTSN+KAV NLV+TLMG +R + QIFAGD+V+KKKP PD+Y+LA +TMGLD ++ V++EDSHIGL AA AAG+ C+VTKSSYTA EDF+ A+++ EELG+D A+ VTL L
Sbjct: 83 EAILWDMDGVLADTERDAHRPAFNIAFEENNLNTDWDVERYGKLLEVGGGKERMTAHWNEVGWPQGFPEGDDRPAKVKELHLRKTDIFMDMIKTGGVPLRPGVLRIIDDAIAADLRLAVCSTSNEKAVRNLVQTLMGPDRAAKFQIFAGDMVQKKKPAPDVYNLAVDTMGLDKSKCVIVEDSHIGLGAAMAAGIACIVTKSSYTAGEDFTGANKIVEELGDD--AATGVTLENL 314
BLAST of mRNA_P-littoralis_Contig116.24.2 vs. uniprot
Match: B5YPA5_THAPS (Possibly a phosphatase from the CbbY protein family n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YPA5_THAPS) HSP 1 Score: 288 bits (737), Expect = 9.290e-90 Identity = 147/238 (61.76%), Postives = 183/238 (76.89%), Query Frame = 2
Query: 272 QALIFDCDGVLADTERDGHRPAFNAAFKIKNLDCEWGVEQYGKLLSVGGGKERMTAHWDEVGWPDCAKTAAERSMLVKELHLLKTALFNQAVVDGEIPLRNGVIRLVDEAIYKKVPLAVCSTSNDKAVTNLVKTLMGKERLERIQIFAGDIVEKKKPNPDIYDLAKETMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTADEDFSAADQVTEELGEDGEASVSVTLATLGRIV 985
+A++FDCDGVLADTERDGHR AFN AF++ ++D W ++YGKLL VGGGKERMTAHW+EVGWPD R+ V LHL KT +F + +G IPLR GV+RLVDEAI V LAVCSTSN+KAV+NLV TLMG ER + QIFAGD+V+KKKP PD+Y +A +TMGLD + V+IEDSHIG+ AA A+G++CLVTKSSYTA EDF+ A ++ EELG+D A+ VTL TL ++
Sbjct: 39 EAILFDCDGVLADTERDGHRLAFNRAFQLNSIDESWSEQRYGKLLEVGGGKERMTAHWNEVGWPDAIPEDG-RAEKVLGLHLQKTDIFMDLIDEGAIPLRPGVLRLVDEAIENGVRLAVCSTSNEKAVSNLVSTLMGAERASKFQIFAGDMVKKKKPAPDVYLMAVDTMGLDKSGCVIIEDSHIGVGAAVASGISCLVTKSSYTAGEDFTGAKKIVEELGDD--AATGVTLDTLASLL 273
BLAST of mRNA_P-littoralis_Contig116.24.2 vs. uniprot
Match: A0A6V2Q9B2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2Q9B2_9STRA) HSP 1 Score: 287 bits (734), Expect = 3.170e-89 Identity = 147/236 (62.29%), Postives = 180/236 (76.27%), Query Frame = 2
Query: 272 QALIFDCDGVLADTERDGHRPAFNAAFKIKNLDCEWGVEQYGKLLSVGGGKERMTAHWDEVGWPDCA-KTAAERSMLVKELHLLKTALFNQAVVDGEIPLRNGVIRLVDEAIYKKVPLAVCSTSNDKAVTNLVKTLMGKERLERIQIFAGDIVEKKKPNPDIYDLAKETMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTADEDFSAADQVTEELGEDGEASVSV-TLATL 973
+A++FDCDGVLADTERDGHR AFN AF +D W E+YG LL VGGGKERMTAHW+EVGWP ++ ER+ VK+LHL KT +F + +G IPLR GV+RLVDEAI V LAVCSTSNDKAV+NLV TLMG ER + QIFAGD+V+ KKP PD+Y++A + M LD +R V++ED+HIGL+AAKAAG+ C VTKSSYT EDF+ AD + EELG+D E V+ TLA+L
Sbjct: 43 EAILFDCDGVLADTERDGHRIAFNRAFANNGIDENWSEERYGVLLEVGGGKERMTAHWNEVGWPSVMPESPDERAAQVKKLHLEKTDIFMDLIDEGVIPLRPGVLRLVDEAIEAGVRLAVCSTSNDKAVSNLVSTLMGPERAAKFQIFAGDMVKAKKPAPDVYNMAVDEMKLDKSRCVIVEDTHIGLSAAKAAGIKCCVTKSSYTGGEDFTGADLIVEELGDDKEGGVTAETLASL 278 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig116.24.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig116.24.2 >prot_P-littoralis_Contig116.24.2 ID=prot_P-littoralis_Contig116.24.2|Name=mRNA_P-littoralis_Contig116.24.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=328bp MMPPFQQHKLQLTLTGLLLILSRGANGFAVTVRIGSSSSSSRFGPQYSTKback to top mRNA from alignment at P-littoralis_Contig116:117202..128471- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig116.24.2 ID=mRNA_P-littoralis_Contig116.24.2|Name=mRNA_P-littoralis_Contig116.24.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=11270bp|location=Sequence derived from alignment at P-littoralis_Contig116:117202..128471- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig116:117202..128471- >mRNA_P-littoralis_Contig116.24.2 ID=mRNA_P-littoralis_Contig116.24.2|Name=mRNA_P-littoralis_Contig116.24.2|organism=Pylaiella littoralis U1_48|type=CDS|length=984bp|location=Sequence derived from alignment at P-littoralis_Contig116:117202..128471- (Pylaiella littoralis U1_48)back to top |