mRNA_P-littoralis_Contig609.42.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig609.42.2
Unique NamemRNA_P-littoralis_Contig609.42.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig609.42.2 vs. uniprot
Match: A0A6H5L0B8_9PHAE (Nfu_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L0B8_9PHAE)

HSP 1 Score: 545 bits (1403), Expect = 4.130e-182
Identity = 335/518 (64.67%), Postives = 378/518 (72.97%), Query Frame = 2
Query:  314 KGSSAAGAAMMPRTMMRVSGIESTPNPSSFKFDLEKSI-APETSGSVVRGITYTSSTA----AAAPEQIRRVLELEGVESVYSLADWLCVNKKPPAKWDAIVPAAVEALGGAAESLDPLTLLMASGGDGGSSWQRSEMDGIAIRLQVSNGIPIQVEACPPGGTPLRRKLSSRFVDAMTEFVGSSGDEMAFFKGRQWIPRGVRYPAEKGTEAETDEERYGRMEVGGGSGSKPSTAAAXXXXXXEEALAAAVDEVELAYHKSRLAGAVQAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDSTARVTAEAAXXXXXXXXXXXAVLQ-SPSAEKGEVIGAVDALCAXXXXXXXXXXXXXXXXXXXXIGFSGSGDGPVAARRAAVAYIGGAXXXXXXXGLEAVAAVFRGDRNAGVRRTAGDALSDLGDTQAIPIAVAGLHDKSKLVRWRAARVVGELAGREQDAMMLDEPREGELEFEVAFEMADAARKVRARAGDKGEGEAV--AGVGPVWKQIQER 1843
            +GS+AA   M P TM RVSGIESTPNPSSFKFDL++++  P +  +  RGITY+ +      A  PE I R+LE++GV+SVY+LADWLC+NKKP AKWDAIVPAAV+ALGGAA SLDPLTLLMASGG+GGS+W+RSEMDGIAIRLQVSNGIPIQVEACPPGGTPLRRKLSSRFV+AMTEFV  SGDEMAFFKGR+W+PRGVRYPAE+G +   DE+ +G  E+ G +  K +   A      EEALAAAVDEVELAYH+SRL GAV AAL             XXXXXXXXX          +STA V A               VLQ SP+A+KGEV+ AVD LCA                    +GF+ SG+GPV ARRAAVAYIGGA       GL+AV+AVFRGD NAGVRRTAGDALSDLGD  AIPIAV GL DKSKLVRWRAARVVGELA REQDA+ LDE REGE+EFEVAFEMADAARK+RAR    GE E    AGVGPVWKQIQER
Sbjct:   32 RGSAAAAWPMAPPTM-RVSGIESTPNPSSFKFDLDQTLYGPGSGATATRGITYSRAVVQQQQAEVPEAILRLLEIQGVDSVYALADWLCLNKKPSAKWDAIVPAAVKALGGAASSLDPLTLLMASGGEGGSAWKRSEMDGIAIRLQVSNGIPIQVEACPPGGTPLRRKLSSRFVEAMTEFVAGSGDEMAFFKGREWLPRGVRYPAEEGGD---DEDGHGE-ELTGATSKKTAAEFA------EEALAAAVDEVELAYHESRLRGAVHAALNLLQKNAEAAEASXXXXXXXXXTSG-------ESTAEVRAATT------------VLQRSPAADKGEVVAAVDTLCALAGDGSKDALDAL-------VGFAASGEGPVPARRAAVAYIGGAGDAAGSAGLKAVSAVFRGDNNAGVRRTAGDALSDLGDPAAIPIAVGGLRDKSKLVRWRAARVVGELATREQDAVSLDEAREGEVEFEVAFEMADAARKIRARVAAPGEEEVATAAGVGPVWKQIQER 512          
BLAST of mRNA_P-littoralis_Contig609.42.2 vs. uniprot
Match: A0A1E7EQX7_9STRA (Nfu_N domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EQX7_9STRA)

HSP 1 Score: 198 bits (503), Expect = 1.500e-50
Identity = 179/541 (33.09%), Postives = 251/541 (46.40%), Query Frame = 2
Query:  371 GIESTPNPSSFKFDLEKSIAPETS-GSVVRGITYTSSTAAAAPEQIRRVLELEGVESVYSLADWLCVNKKPPAKWDAIVPAAVEAL-----GGAAESLDPLTL---LMASGGDGGSSW--QRSEMDGIAIRLQVSNGIPIQVEACPPGGTPLRRKLSSRFVDAMTEFVGSSGDEMAFFKGRQWIPRGVRY--PAEKGTEAETDEERYGRMEVGGGSGSKPSTAAAXXXXXXEEALA------AAVDEVELAYHKSRLAGAVQAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDSTARVTAEAAXXXXXXXXXXXAVLQSPSAEKGEVIGAVDALCAXXXXXXXXXXXXXXXXXXXXIGF-----SGSGDGPVAARRAAVAYIGGAXXXXXXXG---------------LEAVAAVFRGDRNAGVRRTAGDALSDLGDTQAIPIAVAGLH-DKSKLVRWRAARVVGELAGREQDAMMLDEPR---EGELEFEVAFEMADAARKVRAR------AGDKGEGEAVAGVGPVWKQIQERG 1846
            GIESTPNPSSF   L + +   TS    +RG TY+++ A+AAP++I  +L+++G++SVY++A  L VNKK  AKW++++P  +E+L     G +A+ +  L L   L AS      +   Q + M  + +R+Q+SN IPIQ+E     GT  R KL  +F + M E      D + FF GR+W+ RG+RY  P + G +   D         G GS S  S   +      +E L           EV+ AY   RLA  V  +                               D   T +VT  +                SP +     +  VD  C                     +       S S  G +AARR A+AY+GG                          AV+  F+ ++N  +RRTAGDA SDLGD +A+P AV  L  D+SKLV+WRAAR++GELA   + A  L +      G+  FEVAFE+ DA RKV+AR      + D  +  A A  GP+WKQIQERG
Sbjct:   71 GIESTPNPSSFLIKLSRPLPGLTSLAGSLRGNTYSATAASAAPDEICSILQIDGIDSVYTMATILTVNKKASAKWESVLPLVLESLLEGDDGDSAQQVQELLLPGLLQASSSSSNLNQNDQTTTMGQVRMRIQLSNKIPIQIEGTGSLGTVQRLKLVPKFQEYMEEL--QQDDTIDFFAGRKWMDRGIRYYLPEDDGNDKGDDSHET----FGNGSNSIDSFTYSSSTEEEKELLGLQFILQTEAKEVDDAYPPQRLARIVSES----------------------RLDGKGRSKDVHPTKKVTPLSVEVESC----------SPQSPFDLTLEDVDRYCNLADGDYGNGDINQDSTHLEALNVLVEFVSSSNQGLLAARRNAIAYLGGTAAAGPGIDNTQTDSTANVMNDRVFHAVSLAFQNEKNPMMRRTAGDAFSDLGDQRAVPYAVTALEGDRSKLVQWRAARILGELADSTEIAGFLKQQTFDGSGKYAFEVAFEIKDALRKVQARLRQNDNSNDGNKKVAPAPKGPIWKQIQERG 573          
BLAST of mRNA_P-littoralis_Contig609.42.2 vs. uniprot
Match: A0A7S3YPQ0_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YPQ0_9EUKA)

HSP 1 Score: 169 bits (429), Expect = 2.480e-42
Identity = 158/466 (33.91%), Postives = 219/466 (47.00%), Query Frame = 2
Query:  491 APEQIRRVLELEGVESVYSLADWLCVNKKPPAKWDAIVPAAVEALGGAAESLD-PLTLLMASGGDGGSSWQR-SEMDGIAIRLQVSNGIPIQVEACPPGGTPLRRKLSSRFVDAMTEFVGSSGDEMAFFKGRQWIPRGVRYPAEKGTEAETDEERYGRMEVGGGSGSKPSTAAAXXXXXXEEALAAAVDEVELAYHKSRL-AGAVQAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDSTARVTAEAAXXXXXXXXXXXAVLQSPSAEKGEVIGAVDALCAXXXXXXXXXXXXXXXXXXXXIGFSGSGDGPVAARRAAVAYIG-----GAXXXXXXXGLEAVAAVFRGDRNAGVRRTAGDALSDLGDTQAIPIAVAGLHDKSKLVRWRAARVVGELAGR-EQDAMMLDEPREGELEFEVAFEMADAARKVRARAGDKGEGE----AVAGV-GPVWKQIQERG 1846
            AP  ++ +L++ GV SVY L  W+ V K+  A W  ++   ++ALGGA+ SL  P  LL+             S+M+GI +RLQVSNGIPIQ+EA    G   RRKLS RF ++++ F+   G++ AFF GR+W+ +G+R               YG + +                    EAL    DE+E  Y   RL A A + A                               D+ ++    AE A              + P A+K     AV+AL                      + F   G G +A RR AVA +G       XXXXXXX  + ++  F  +    +RRTAGDAL+DLGD +AIP A+  L+D SKLVRWRAA ++GE+ G    +A +L E  E E  FEVAFEM  +  +VR   GD   G+       GV GP+WKQ+Q+ G
Sbjct:    7 APAAVQALLDIPGVASVYVLPTWVTVTKEKKAAWGEMLMPCIDALGGASPSLSLPTNLLLTEXXXXXXXXXXXSDMEGIQMRLQVSNGIPIQIEAKAMDGMSERRKLSGRFEESISTFLSIPGNDQAFFDGRKWLNKGLR---------------YGHVSL-------------------SEALDTLADEIETMYPPQRLKALAAEEA-----------------EYTLVDLQALLNDLDDLASVDTVAEVAQKH-----------EDPMAQKA----AVNAL----------------------VRFVQRGTGSMATRRHAVASLGIMGEXXXXXXXXXXXXDCLSLCFENEPAPFLRRTAGDALNDLGDPRAIPAALRALNDPSKLVRWRAAHLLGEVEGAGAAEADILSEAAETETAFEVAFEMKSSEMRVRKTLGDGVGGDDXXXXXXGVKGPMWKQLQQSG 384          
BLAST of mRNA_P-littoralis_Contig609.42.2 vs. uniprot
Match: A0A7S3VDY6_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VDY6_9STRA)

HSP 1 Score: 154 bits (389), Expect = 1.150e-35
Identity = 165/557 (29.62%), Postives = 245/557 (43.99%), Query Frame = 2
Query:  356 MMRVSGIESTPNPSSFKFDLEKSIAPET-----SGSVVRGITYTSSTAAAAPE-----QIRRVLELEGVESVYSLADWLCVNKKPPAKWDAIVPAAVEALGGAAESLDPLTLLM------ASGGDGGSSWQRSEMDG-IAIRLQVSNGIPIQVEACPPGGTPLRRKLSSRFVDAMTEFV----------GSSGDEMAFFKGRQWIPRGVRYPAEKGTEAETDEERYGRMEVGGGSGSKPSTAAAXXXXXXEE--------ALAAAVDEVELAYHKSRLAGAVQAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDSTARVTAEAAXXXXXXXXXXXAVLQSPS-AEKGEVIGAVDALCAXXXXXXXXXXXXXXXXXXXXIGFSGSGDGPVAARRAAVAYIGGAXXXXXXXG----------LEAVAAVFRGDRNAGVRRTAGDALSDLGDTQAIPIAVAGLH-DKSKLVRWRAARVVGELAGREQDAMMLDEPR--EGELEFEVAFEMADAARKVRARA---------GDKGEGEAVAGV----GPVWKQIQE 1840
            M  +SGIESTPNPSSF   L +  AP T     +GS+ RG T+ S +     +     +I  +L+++GV SV+++A  L +NKK  AKW+ ++P    AL G     +   +L+       S  + GS    S   G + +R+Q SN IPIQVE     GT  RRKLS +F ++M   +           ++ +++ FF GR+W+ RG+RY  E       D++         G GS+ S +A       EE         L    DE++ AY   RLAG V  +                               +  S      +             AV +S   AEKG+   A+  L                        F  S  G + ARR A+A++GG                     A+ +  + +++  +RRTAGDALSDLGD +AIP A+  +  D+S+LV+WRAAR++GE     +   +L +      +  F++AFE+ DA RKV+AR          G+  +    A      GP+WKQIQE
Sbjct:   62 MAVISGIESTPNPSSF---LIRVAAPPTGLEDLAGSL-RGKTFASGSFTRVSDHDRLPEIASILDVDGVVSVFAMATALTINKKASAKWEVVLPLVTTALIGNDNDQNDQDILLQGLLALTSAANAGSPQSASASAGQVRMRMQFSNKIPIQVEGTGYLGTVQRRKLSPKFQESMESMMQMQEGDSNSNSATSNKLDFFGGRKWVDRGIRYLPES-----HDDD---------GDGSRDSASATASSITPEEQELLELEAVLQTESDEIDAAYSTRRLAGIVANS---------------NDGSPLTLTPLEDRNPENPSNNXXXVDVEHQNQILILDLEAVDRSCDLAEKGDE-QALQVLAT----------------------FVSSRQGSLPARRNALAFLGGTGDIGLTTEHMNVNSSDLVFMAIVSALQHEKSPIMRRTAGDALSDLGDPRAIPYAITAMEEDRSRLVQWRAARILGEFGDAPETLAVLKQASFSSDKYAFDIAFEIKDALRKVKARVVQAQERQQNGNGNDANIDANKAPRKGPMWKQIQE 562          
BLAST of mRNA_P-littoralis_Contig609.42.2 vs. uniprot
Match: A0A7S2XB48_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XB48_9EUKA)

HSP 1 Score: 138 bits (348), Expect = 2.820e-32
Identity = 128/402 (31.84%), Postives = 169/402 (42.04%), Query Frame = 2
Query:  689 SSWQRSEMDGIAIRLQVSNGIPIQVEACPPGGTPLRRKLSSRFVDAMTEFVGSSGDEMAFFKGRQWIPRGVRYPAEKGTEAETDEERYGRMEVGGGSGSKPSTAAAXXXXXXEEALAAAVDEVELAYHKSRLAGAVQAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDSTARVTAEAAXXXXXXXXXXXAVLQSPSAEKGEVIGAVDALCAXXXXXXXXXXXXXXXXXXXXIGFSGSGDGPVAARRAAVAYIGGAXXXXXXXGL-----EAVAAVFRGDRNAGVRRTAGDALSDLGDTQAIPIAVAGLHDKSKLVRWRAARVVGELAGREQDAM-MLDEPREGELEFEVAFEMADAARKVR---------ARAGDKGE----GEAVAGVGPVWKQIQ 1837
            SS   SEM GI +RLQVSNGIPIQ+EA    GT  RRKLS RF +++  F+ + G++  FF GR+W+ +G+R               YG   +                    EAL    DE+E  Y   RL                                       + ++    AE A              + PSA K     A+DAL                      + F   G G +A RR AVA +G         G+     + ++  F  +    +RRTAGDAL+DLGD +AIP A+  L D SKLVRWRAA ++GE+ G    A  +L E    E  FEVAFEM  +  ++R           AGD GE    GEA    GP+WKQ+Q
Sbjct:    4 SSSSSSEMQGIQMRLQVSNGIPIQIEAKSTDGTSDRRKLSGRFEESIMAFLSTPGNDQLFFDGRKWLNKGLR---------------YGHASL-------------------SEALDTLADEIETMYPPERLNALASE----------------DSNQALADLQPLLKDLHDLASVDTVAEIAQKH-----------EDPSARKA----AIDAL----------------------VRFVQRGSGNMATRRHAVASLGIMGDAIEELGVAGAVVDCLSFCFENEPAPFLRRTAGDALNDLGDPRAIPAALRALKDPSKLVRWRAAHLIGEVEGAGTTAADILAEAETNETAFEVAFEMKSSEMRIRKTLAARDGGGAAGDGGEDGASGEAGGIKGPMWKQLQ 318          
BLAST of mRNA_P-littoralis_Contig609.42.2 vs. uniprot
Match: A0A7S0H0H6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H0H6_9EUKA)

HSP 1 Score: 124 bits (312), Expect = 1.130e-27
Identity = 77/195 (39.49%), Postives = 114/195 (58.46%), Query Frame = 2
Query:  344 MPRTMMRVSGIESTPNPSSFKFDLEKSI---APETSGSVVRGITYTSSTA---AAAPEQIRRVLELEGVESVYSLADWLCVNKKPPAKWDAIVPAAVEALGGAAESLDPLTLLMASGGDGGSSWQRSEMDGIAIRLQVSNGIPIQVEA-CPPGGTPLRRKLSSRFVDAMTEFVGSSGDEMAFFKGRQWIPRGVRY 907
            +P    +V+ +ESTP+P +FK  L++ +   + E      RG T+  S A     APE ++ VLEL+GVESV    DW+ V K+  A W  ++   + ++GGA+ +L  L     +G       +     GI +RLQVSNGIPIQVEA C   GT  R KLS RF +A+ +F+   G+E +FF+GR+W+ +G+RY
Sbjct:   44 LPAIFAKVTLVESTPSPDAFKLSLDEVLPVRSEEEKEERKRGKTFRGSQAFDLLVAPEAVKGVLELDGVESVLVSTDWITVTKRAKASWGDLLEKVITSIGGASPTL-VLPDAPRAGNKESEGKEGGLEGGIKMRLQVSNGIPIQVEATCISDGTSKRYKLSGRFEEAIADFLKIPGNEQSFFQGRKWLNKGIRY 237          
BLAST of mRNA_P-littoralis_Contig609.42.2 vs. uniprot
Match: A0A7S2XS20_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XS20_9STRA)

HSP 1 Score: 117 bits (292), Expect = 3.370e-26
Identity = 77/159 (48.43%), Postives = 98/159 (61.64%), Query Frame = 2
Query: 1403 FSGSGDGPVAARRAAVAYIGG-------AXXXXXXXGLEAVAAVFRGDRNAGVRRTAGDALSDLGDTQAIPIAVAGLHDKSKLVRWRAARVVGELAGREQDAMMLDEPRE--GELEFEVAFEMADAARKVRARAGDKGEGEAVAG----VGPVWKQIQE 1840
            F  S +G +AARR A+AY+GG       A         +A+A+    ++N  +RRTAGDALSDLGD +A+  AV+ L DKSKLV+WRAAR++GEL G   D M + +      E  FEVAFE+ DA RKVRAR  +K  G  V G     GP+WKQIQE
Sbjct:   32 FVASHEGSMAARRNALAYLGGTAGTDSAANAVTTDLVFDAIASALENEKNPTMRRTAGDALSDLGDARAVTCAVSALGDKSKLVQWRAARILGEL-GDSMDVMAVLKQASFSSEYAFEVAFEIKDAMRKVRARLQNKESGVNVNGSGPATGPMWKQIQE 189          
BLAST of mRNA_P-littoralis_Contig609.42.2 vs. uniprot
Match: A0A7S3BA81_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BA81_9EUKA)

HSP 1 Score: 107 bits (267), Expect = 6.860e-24
Identity = 63/113 (55.75%), Postives = 78/113 (69.03%), Query Frame = 2
Query: 1502 VAAVFRGDRNAGVRRTAGDALSDLGDTQAIPIAVAGLHDKSKLVRWRAARVVGELAGREQDAMMLDEPREGELEFEVAFEMADAARKVRARAGDKGEGEAVAGVGPVWKQIQE 1840
            V   F+ ++ AG+RRTAGDALSDLG+ +A P+AVA L D+S LVRWRAAR++GE+      A  L +    E  FEVAFEM DAARKV +R  D GEG A    GP+WKQIQ+
Sbjct:    1 VGVAFKSEKAAGLRRTAGDALSDLGNGRAAPLAVAALTDRSTLVRWRAARILGEVGEGGSVAAALKQASLEEAAFEVAFEMKDAARKVASR--DAGEGGAK---GPMWKQIQD 108          
BLAST of mRNA_P-littoralis_Contig609.42.2 vs. uniprot
Match: A0A7S0H5Y1_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H5Y1_9EUKA)

HSP 1 Score: 95.1 bits (235), Expect = 9.000e-19
Identity = 56/104 (53.85%), Postives = 72/104 (69.23%), Query Frame = 2
Query: 1538 VRRTAGDALSDLGDTQAIPIAVAGLHDKSKLVRWRAARVVGELAGRE-QDAMMLDEPREGELEFEVAFEMADAARKVRARAGDKGEGEAVAGVGPVWKQIQERG 1846
            +RRTAGDAL+DLGD + IP A   L D SKLVRWRAA ++GE+ G   +D   L++ RE E  FEVAFEMA +A ++RA AG   EG+A    GP+WKQ++  G
Sbjct:   76 LRRTAGDALNDLGDPRGIPAARRALGDPSKLVRWRAAHILGEVEGGGLEDLTALEKAREREDAFEVAFEMAMSADRLRASAG---EGDAEGVKGPMWKQLRGLG 176          
BLAST of mRNA_P-littoralis_Contig609.42.2 vs. uniprot
Match: UPI00030A3AF3 (conserved virulence factor C family protein n=1 Tax=Brevibacillus massiliensis TaxID=1118054 RepID=UPI00030A3AF3)

HSP 1 Score: 82.4 bits (202), Expect = 6.380e-13
Identity = 61/197 (30.96%), Postives = 101/197 (51.27%), Query Frame = 2
Query:  359 MRVSGIESTPNPSSFKFDLEKSIAPETSGSVVRGITYTSSTAAAAPEQIRRVLELEGVESVYSLADWLCVNKKPPAKWDAIVPAAVEALG-GAAESLDPLTLLMASGGDGGSSWQRSEMDGIAIRLQVSNGIPIQVEACPPGGTPLRRKLSSRFVDAMTEFVGSSGDEMAFFKGRQWIPRGVRYPAEKGTEAETDEE 946
            M++  IE TP+P+S K +L++ + P         +TYT      APEQI+++LE+EGV+S++ +AD++ + ++  A W AI+  A E LG G A+S+  +            + Q  +   + + +Q+   IP+QV+    G   +R  L  RF  A      +S +       R+W+ +GVRY    GT  E  EE
Sbjct:    1 MKIVSIEPTPSPNSMKLNLDEKLPPGVK------MTYTQENRERAPEQIKKLLEIEGVKSIFHVADFIALERRANADWKAILAQAGEVLGEGTAQSVQAVA----------QNSQDDQWQEVNVFVQMFRHIPMQVKVTA-GLEQMRVGLPERFTQAAMRAGAASAN---LVMERKWVEQGVRY----GTMQEIGEE 173          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig609.42.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0B8_9PHAE4.130e-18264.67Nfu_N domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A1E7EQX7_9STRA1.500e-5033.09Nfu_N domain-containing protein n=1 Tax=Fragilario... [more]
A0A7S3YPQ0_9EUKA2.480e-4233.91Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A7S3VDY6_9STRA1.150e-3529.62Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
A0A7S2XB48_9EUKA2.820e-3231.84Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S0H0H6_9EUKA1.130e-2739.49Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
A0A7S2XS20_9STRA3.370e-2648.43Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S3BA81_9EUKA6.860e-2455.75Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S0H5Y1_9EUKA9.000e-1953.85Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
UPI00030A3AF36.380e-1330.96conserved virulence factor C family protein n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig609contigP-littoralis_Contig609:114616..120764 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog102129.Lepto7375DRAFT_1486
PFAMsHEAT_2,HEAT_PBS,Nfu_N,Virulence_fact
Model size2772
Max annot lvl1117|Cyanobacteria
Hectar predicted targeting categorychloroplast
Exons6
Evalue8.98e-15
EggNOG OGsCOG1413@1|root,COG1413@2|Bacteria,1G240@1117|Cyanobacteria
Ec32 ortholog descriptionScaffold protein Nfu/NifU, N-terminal
Ec32 orthologEc-16_003800.1
DescriptionScaffold protein Nfu/NifU N terminal
Cds size1656
COG categoryC
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig609.42.2prot_P-littoralis_Contig609.42.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig609 114812..119844 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791267.8633795-UTR-P-littoralis_Contig609:114615..1148111680791267.8633795-UTR-P-littoralis_Contig609:114615..114811Pylaiella littoralis U1_48UTRP-littoralis_Contig609 114616..114811 +
1680791267.9788382-UTR-P-littoralis_Contig609:119844..1207641680791267.9788382-UTR-P-littoralis_Contig609:119844..120764Pylaiella littoralis U1_48UTRP-littoralis_Contig609 119845..120764 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791267.8826442-CDS-P-littoralis_Contig609:114811..1152161680791267.8826442-CDS-P-littoralis_Contig609:114811..115216Pylaiella littoralis U1_48CDSP-littoralis_Contig609 114812..115216 +
1680791267.893537-CDS-P-littoralis_Contig609:116819..1169781680791267.893537-CDS-P-littoralis_Contig609:116819..116978Pylaiella littoralis U1_48CDSP-littoralis_Contig609 116820..116978 +
1680791267.9039094-CDS-P-littoralis_Contig609:117726..1180201680791267.9039094-CDS-P-littoralis_Contig609:117726..118020Pylaiella littoralis U1_48CDSP-littoralis_Contig609 117727..118020 +
1680791267.9193687-CDS-P-littoralis_Contig609:118304..1186771680791267.9193687-CDS-P-littoralis_Contig609:118304..118677Pylaiella littoralis U1_48CDSP-littoralis_Contig609 118305..118677 +
1680791267.949086-CDS-P-littoralis_Contig609:119015..1191541680791267.949086-CDS-P-littoralis_Contig609:119015..119154Pylaiella littoralis U1_48CDSP-littoralis_Contig609 119016..119154 +
1680791267.964508-CDS-P-littoralis_Contig609:119558..1198441680791267.964508-CDS-P-littoralis_Contig609:119558..119844Pylaiella littoralis U1_48CDSP-littoralis_Contig609 119559..119844 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig609.42.2

>prot_P-littoralis_Contig609.42.2 ID=prot_P-littoralis_Contig609.42.2|Name=mRNA_P-littoralis_Contig609.42.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=552bp
MTNMKNTEIILLSMSAALLLPSAQAFFFIAPPARAAVAIKGSSAAGAAMM
PRTMMRVSGIESTPNPSSFKFDLEKSIAPETSGSVVRGITYTSSTAAAAP
EQIRRVLELEGVESVYSLADWLCVNKKPPAKWDAIVPAAVEALGGAAESL
DPLTLLMASGGDGGSSWQRSEMDGIAIRLQVSNGIPIQVEACPPGGTPLR
RKLSSRFVDAMTEFVGSSGDEMAFFKGRQWIPRGVRYPAEKGTEAETDEE
RYGRMEVGGGSGSKPSTAAATAAESAEEALAAAVDEVELAYHKSRLAGAV
QAALILLQQSAKAAEAAAAAAAAAAAGSGSIIGGDEDSTARVTAEAATTA
QAAVRAAAAVLQSPSAEKGEVIGAVDALCALAADDADGMAAVAKDALDAL
IGFSGSGDGPVAARRAAVAYIGGAGNAAGSAGLEAVAAVFRGDRNAGVRR
TAGDALSDLGDTQAIPIAVAGLHDKSKLVRWRAARVVGELAGREQDAMML
DEPREGELEFEVAFEMADAARKVRARAGDKGEGEAVAGVGPVWKQIQERG
M*
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mRNA from alignment at P-littoralis_Contig609:114616..120764+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig609.42.2 ID=mRNA_P-littoralis_Contig609.42.2|Name=mRNA_P-littoralis_Contig609.42.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=6149bp|location=Sequence derived from alignment at P-littoralis_Contig609:114616..120764+ (Pylaiella littoralis U1_48)
GAGTTCCTGCCTGTGTATCATACCCATGGAAAACCACCAGCGAGCATACA GCAGCAGTACCGACAACAGAAGGGACATCTTGAAACGGCAGCAGCAGTGG CGGGAGAATCACTGTACTGACACCTAGCCCTTCCTCTGTATATCCTGCTG CGCTGACCTCCAGAACCCTCTACAAGGAAGGGGGAAAAACAGCAGCATGA CGAACATGAAGAACACGGAGATAATACTGCTTTCCATGTCAGCAGCCCTC CTGCTGCCCTCCGCCCAAGCGTTCTTCTTCATTGCTCCACCGGCAAGAGC CGCAGTAGCCATCAAAGGATCGTCAGCAGCAGGAGCAGCAATGATGCCGC GGACGATGATGCGGGTGTCGGGCATCGAGTCCACGCCAAACCCGAGCTCT TTTAAATTTGACCTCGAGAAGAGTATCGCGCCGGAGACCTCAGGCTCGGT GGTGAGAGGTATCACCTACACCTCTAGCACGGCCGCCGCAGCGCCCGAGC AGATCCGTCGGGTGCTCGAGCTGGAGGGCGTGGAGTCCGTATACTCCTTG GCCGATTGGCTCTGCGTCAACAAAAAGCCTCCTGCCAAGTGGGATGCTAT TGTGAGCGACAGAGCTTAGTTTATTCCTGGAAATCAGCCTTGTGCGCGTG GTCGGGTTGAAGTTGACAGTCCCGTTGTACACCCCAGTTTCCTTGGCTCT GTGATTTCGTCGTTTGTGGTGTATGTCTGGAAGGCAGTAAGCGTACGTGC TTCCAGGCCAACACACATTTTTTTAAAAAGCGTTTTGACTACCAAGTCGC ATAGGATATTTCCTGGGCTTCAAAGGAGTTCTGGCGATGGGTGTACGGAG AATTGACACGTAGAGGCGTGAGGCGCACCACACCGCACACACACCTGTTG TCCATTACCAGCACACCAGCACACACACGGCGGTGTGATATACTTGAGCC ACTTGTTAAATCATTGCCATTATTGCCCGGGATCACATATATCTGGATTG ACTGGTATTATGCCACGTGTACAGCTGCTGCAGCTGCTGCAGACAGCAGT CCTCTTGCTGCTGTCTCTTACGAAGTAGAAGATTGACTTTTCTGATCGAT TTTCAAACCCTATCATACCAAGTATGTACGATCGAGCAGCGCACATAACG GCCCCGTATTTTGCTTTTGGAACACAAGACGTGACGACATCAATCGATGC TCGGCCCCTGCTACTGTTGTAGGACACCAATCTCGACCAAACCTTTGAGG GCGTATCATATCATATGCTCCTGTGTTCTGAGCTTAGGCACACCAATCGT GTTCGTTGTAGGCTTTGCCTGTCGCGAGATCTCGGTGGCGGGGTGGATTT TTGATCGAAAATTGAAGCTCGGACCTCTGTCCGCCACCGAAACCTCGCGA TAGACACAGCTCACAACCGATATGCCCAAATTCAGAACACAGGAGCCTAC GCCCCAAAAGGTGTGGTTGCGATTGATGTCCTTGGGGACCGAGCGCCGAT TGATGTTGCCACGTGTTGTGTTCCAAGAGAAAAAAATCAGGCCGATTGGG GGTTCGCTGCTCGACCGGACACGGGTGCGAAAATCGATCAGAAAAATCAA CCTTGCAAGAAACAGCCTATTCGAGTGAAGACGAAAACCAACAAATGCGA CACAAAACATGGTGAGTTGAATCAGTTGGATTTTTTGTGCCAACGCGACA ACCCTTTCTTGCAGACGGCTCAAGGCCTCAAACAACTTGTGGTTTAAAGG CCGACTTGGCACATTGACCACATCTGCATGCAACGAACGGCCGACTCGGG CCAAACTCACTATTTTTTGTGATGTGACAAACCACTACCTGGTATTCAAC ACTGCTTCAGCTGCCTATCTGGCGAAAACCGAGTAGTCTGTGATGCTCCA CAACGACCGGGGATAAAAATATTTAGGGCCTTGCGAGTGGTATAATTTTC GTTGTATGTATGTAGTTCGTCGACGTGGTGTGTATACAACAAGAAGACGC GCCGCGTCACACACCTTCAGCGATGACAACAAAATATGAAGTAAATGGCA GGATCTCTAAATCAAATATCACCCTCTCATTACCCGATAAGTTATGCACA GAAATGGTTGCCAATCGGCAATGAAGCAGAACTCGTCAGTTGTCAACCGG ACGATGATGATCTTGGAGATGACGACGATGATGCGGTTGTGACGTATTGG GCAGGTTCCGGCAGCAGTCGAGGCTCTGGGCGGGGCGGCCGAGTCTCTAG ACCCTCTCACCCTCCTCATGGCGTCTGGCGGTGACGGGGGATCTTCGTGG CAAAGGTCCGAGATGGACGGCATCGCCATCCGGCTGCAGGTTTCCAACGG CATTCCGATCCAGGTGCGCGCGGCAAAGATTGTGTGTGCGTGGAGAAGAG AGGGAGATAGGGAGAAGAGAGCTTCGTATGTATTGCTCGTGGGCAAATGC GCCGCACTTTTCCCACCCATTGAAGACAGGGTTGGTCAGCGCCCATCAGC GCCACGGGCGTTCGCGCTGTTTATGAGATGGACTTATCCCCGAGACCACT CAGACTACTCAGAGTCAGCGGCTGACTGAGTTGTGTGGTGGACAATTCGA CCTAGTGAACAAAGTATACTTCGTTTGCCTTCGGGTATTCGATCCCATCT CATGACGTGCAGTGGTCTCCGAGCGCTCGCCGACGTTCCCCGGCTGAGTG AGAAAAATCTCGGGGACAAAATCCATCCAACAAACAAGTACGACGCGCCG CGCCTCTGAAGCTTCACGCGAGCTACTCTACGCTTCCCCTGCCTGCCGTC CAACCCTATGCGCCGTCTCACAAACGTAAGCAATATTCCCCACCACACTC CAATTAAATTGCGCTCCTAACAGAGACGACGAGATAAAAGGTGCCCGCAG TTTTCTGATTGGCCAAACTTTCTAGAACATGGTGACACCGTAGTGGATGA CGTCACCGGTCGACCAGGGATTTTTGGCCAATCAGATTTCTCAATTCGAA AGAATTGACCAATCAGAAAAATGCAGGCACCTTCTATCTCTCTCTCTCTT CAAGTCAAAGCCGTCCCCTCCTTTCCTTCCTTCCTTCCTTCTCTGATATG GCCCTCAACAGGTCGAGGCCTGCCCTCCGGGGGGAACTCCACTCCGCCGC AAGCTCTCCTCCCGCTTTGTCGACGCCATGACCGAGTTCGTCGGCAGCTC CGGCGACGAGATGGCCTTCTTCAAGGGCCGCCAGTGGATACCTCGCGGTG TCCGGTACCCGGCGGAGAAGGGAACAGAGGCGGAGACGGACGAGGAACGC TACGGTAGGATGGAAGTCGGCGGTGGGTCAGGAAGCAAGCCGTCCACGGC AGCGGCGACGGCTGCCGAGTCCGCCGAAGAAGCCCTGGCTGCGGCCGTTG ACGAGGTCTGTGGACCCGTGTCGAATCGTGTCGAATCGCGGGAGGTTTGA TTGTTCTCTGAACTGCCCTCCTCTTCGTTTCCTAACCTCTAGAGATGTGA GACCGTTGGATGACGCACCGCACATTTCTTCATTTTGTCAGAGCTGGCCT CGAAGAGGCATCGGTGCCATCGTCGAGGTCACGCCACGTTTATCACTGAA CACGAAACCGACCTTTCTTTTGCAGCCCCTGTATACACAACCTTGTTAAG TGCTGGAACATCGTTTCTTCGCTCGACTTCGATCAACAGGTCGAGCTGGC GTATCACAAGTCAAGGCTGGCGGGGGCGGTGCAAGCCGCGCTGATCCTTC TCCAGCAGAGTGCTAAGGCTGCCGAAGCTGCCGCCGCCGCCGCCGCCGCC GCCGCCGCCGGTAGCGGTAGCATCATCGGCGGGGACGAGGATTCCACTGC CCGGGTCACCGCGGAGGCTGCGACTACCGCACAAGCGGCGGTGCGGGCGG CAGCGGCAGTGCTGCAGTCGCCCTCAGCGGAGAAGGGGGAGGTTATCGGC GCGGTGGATGCCCTCTGCGCCCTGGCGGCAGACGACGCTGACGGCATGGC CGCCGTCGCTAAGGACGCTCTGGACGCCCTTATTGGCTTCTCGGGGTCGG GGGACGGGCCAGGTGAGCGCTTGTGCGGGACAGTTACTAAGTAATTTCGT TTCCGTCGAGCCCTCTTCCCGCGAGCAAACTGGCTTGTGGGCGTGCGATA GAAGTCAGTACTGGACTGTCGTGCTGTGAAATGGAATGCTGCATTATTTC GGTCCCATAGTTTTGTGGCAGGGACTCCCACACCACGGCGACAAGAACAA TTTTGGTCAAATCAGTTCTAAAGCAAAATGCGCCATCTATAGCTTTCCGC TACATAGCAGGACTCAACCAGCCGGCCAACCAACCAAGCGAACACCCGGT CAACCAACGTTTCCTTTATTTATTTTGTTCGTGCGTGCGGTTGTTTCCAG TGGCCGCGCGGCGCGCGGCAGTGGCATACATCGGCGGTGCGGGAAACGCG GCGGGATCGGCGGGGCTGGAGGCCGTCGCGGCCGTGTTCCGCGGGGACAG GAACGCTGGGGTTCGGCGAACCGCGGGGGACGCGCTCAGGCGAGCAGCAG CAGCAGCTGCCAGCGCGCGACACTGATGACTCCACGCACTGCATGCAATT CACGTCCTTTGTCGCCCGTAGGGACGATGCCGTCGGCGTTGGTCGGTTTC TTGTGTCGGGCTTCCTTTGAGACGATTATTTTTGAGGGTCGGACGGTGTG TCGATGTGTCCGTCTCTTGCGTGTGTACTTGTATGTGTGCATGTTTGTGC CGTCGGTCGTCCCCCTTCGCCTGTCCACCCCACCCCCCCCCACCCCCGCC CTTCCCTCCTTGCGCACGTGGGTGAAAAGCCGCGAGAACTCGTGTTCAGT GAAAGTAATACTACCTAGGTGTACGTCGTTCATGTCCCGTTCCGGCTACA TGAGTGGGGATTATGATCCACCCCGCCCCCCTTACCCCCACAGTGACCTC GGAGACACCCAGGCGATTCCGATCGCCGTCGCCGGGCTCCACGACAAGAG CAAGCTGGTCCGCTGGAGAGCCGCGCGCGTTGTCGGGGAGCTGGCCGGGC GGGAGCAGGACGCGATGATGTTGGACGAGCCTCGCGAGGGGGAGTTGGAG TTCGAGGTGGCGTTCGAGATGGCGGACGCGGCGCGTAAGGTTAGGGCTCG CGCAGGAGACAAAGGGGAAGGAGAGGCGGTGGCCGGAGTAGGGCCTGTGT GGAAGCAGATTCAGGAAAGGGGTATGTAGTACTTCGAGAAAATATGTATA GACAGCGAAGCAAGGAATAGAGTGGGCTCTGGCCCCGAGGGATGTAGGTA AAAGGGGCAGGTTTTGTGGACAACACACGGGAAGGGCCTTAAAGGTGCAT CTGAACCAAAGGCTTTTGGGAAGGTGGTGTTGAGTTAAACGTTCAACAGG TTCTGCGCGCGGGTAAAAAAAAGACACCACAATTTGGGTTCAAATATTAT CGTAGACGCGTGGAACTTGCAAGAAGTAACCGAGAAGATTGAAAAGTCAG TGCAAACGAAGTACTAGTAGTGGTGTGTACCTGCGGTAACAGGCGTCCGT GGTTTTGATGTGAAGAACAGAACATGCCGCCTGAGGTGGTGCGGTGGAGA GCGAGTTGGTCCAAGCAATTCTAGACTTTTAGAGTTCGGAGCGAATTTTT ACATGCAAAGGTAATTTTTACATGCAGAGGTGGGCACCAAGTATCATGTC ATACTAGGAAGATATTTTCCGTCGACGATTTCATTCATTTCAACTTTTTA GAGTCTCGAGTTACTGCAATGCCAAGATCAGGACAAAGAAGAAGACGAAA CGCGTGTGTTTTTTCGGATGCGCTTCGAATTGCAGCAGCAACAGCAATGC AGTGTATACGGGTATGATGTGGTGTGGCATAATATGATTGATTAAAGTTT TCACGTTTTTGGCTTTTCGAGATCCGGGAGGGGTCGGCGGTCGGCGGGTA TGATAGCACACAGAACTTTTACGAGGACCTTCCTGAAGTTCCCAGCTTTC CTCCCTCCCTCCCTTATTTTGTAGCGGCGGTCCTCGTCAGGCAATCGATA AAAAAAAGAAAAAGCAAGGAGACTGTAGAACAAAATCCCTTCATAAGGGG TACATTCCCACAACGTCTGTCGAGGATGAATTCCCTTTTTTTATGTACG
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Coding sequence (CDS) from alignment at P-littoralis_Contig609:114616..120764+

>mRNA_P-littoralis_Contig609.42.2 ID=mRNA_P-littoralis_Contig609.42.2|Name=mRNA_P-littoralis_Contig609.42.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1656bp|location=Sequence derived from alignment at P-littoralis_Contig609:114616..120764+ (Pylaiella littoralis U1_48)
ATGACGAACATGAAGAACACGGAGATAATACTGCTTTCCATGTCAGCAGC
CCTCCTGCTGCCCTCCGCCCAAGCGTTCTTCTTCATTGCTCCACCGGCAA
GAGCCGCAGTAGCCATCAAAGGATCGTCAGCAGCAGGAGCAGCAATGATG
CCGCGGACGATGATGCGGGTGTCGGGCATCGAGTCCACGCCAAACCCGAG
CTCTTTTAAATTTGACCTCGAGAAGAGTATCGCGCCGGAGACCTCAGGCT
CGGTGGTGAGAGGTATCACCTACACCTCTAGCACGGCCGCCGCAGCGCCC
GAGCAGATCCGTCGGGTGCTCGAGCTGGAGGGCGTGGAGTCCGTATACTC
CTTGGCCGATTGGCTCTGCGTCAACAAAAAGCCTCCTGCCAAGTGGGATG
CTATTGTTCCGGCAGCAGTCGAGGCTCTGGGCGGGGCGGCCGAGTCTCTA
GACCCTCTCACCCTCCTCATGGCGTCTGGCGGTGACGGGGGATCTTCGTG
GCAAAGGTCCGAGATGGACGGCATCGCCATCCGGCTGCAGGTTTCCAACG
GCATTCCGATCCAGGTCGAGGCCTGCCCTCCGGGGGGAACTCCACTCCGC
CGCAAGCTCTCCTCCCGCTTTGTCGACGCCATGACCGAGTTCGTCGGCAG
CTCCGGCGACGAGATGGCCTTCTTCAAGGGCCGCCAGTGGATACCTCGCG
GTGTCCGGTACCCGGCGGAGAAGGGAACAGAGGCGGAGACGGACGAGGAA
CGCTACGGTAGGATGGAAGTCGGCGGTGGGTCAGGAAGCAAGCCGTCCAC
GGCAGCGGCGACGGCTGCCGAGTCCGCCGAAGAAGCCCTGGCTGCGGCCG
TTGACGAGGTCGAGCTGGCGTATCACAAGTCAAGGCTGGCGGGGGCGGTG
CAAGCCGCGCTGATCCTTCTCCAGCAGAGTGCTAAGGCTGCCGAAGCTGC
CGCCGCCGCCGCCGCCGCCGCCGCCGCCGGTAGCGGTAGCATCATCGGCG
GGGACGAGGATTCCACTGCCCGGGTCACCGCGGAGGCTGCGACTACCGCA
CAAGCGGCGGTGCGGGCGGCAGCGGCAGTGCTGCAGTCGCCCTCAGCGGA
GAAGGGGGAGGTTATCGGCGCGGTGGATGCCCTCTGCGCCCTGGCGGCAG
ACGACGCTGACGGCATGGCCGCCGTCGCTAAGGACGCTCTGGACGCCCTT
ATTGGCTTCTCGGGGTCGGGGGACGGGCCAGTGGCCGCGCGGCGCGCGGC
AGTGGCATACATCGGCGGTGCGGGAAACGCGGCGGGATCGGCGGGGCTGG
AGGCCGTCGCGGCCGTGTTCCGCGGGGACAGGAACGCTGGGGTTCGGCGA
ACCGCGGGGGACGCGCTCAGTGACCTCGGAGACACCCAGGCGATTCCGAT
CGCCGTCGCCGGGCTCCACGACAAGAGCAAGCTGGTCCGCTGGAGAGCCG
CGCGCGTTGTCGGGGAGCTGGCCGGGCGGGAGCAGGACGCGATGATGTTG
GACGAGCCTCGCGAGGGGGAGTTGGAGTTCGAGGTGGCGTTCGAGATGGC
GGACGCGGCGCGTAAGGTTAGGGCTCGCGCAGGAGACAAAGGGGAAGGAG
AGGCGGTGGCCGGAGTAGGGCCTGTGTGGAAGCAGATTCAGGAAAGGGGT
ATGTAG
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