prot_P-littoralis_Contig609.33.5 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig609.33.5
Unique Nameprot_P-littoralis_Contig609.33.5
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length471
Homology
BLAST of mRNA_P-littoralis_Contig609.33.5 vs. uniprot
Match: A0A6H5KY82_9PHAE (RECA_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY82_9PHAE)

HSP 1 Score: 476 bits (1226), Expect = 3.110e-163
Identity = 315/443 (71.11%), Postives = 331/443 (74.72%), Query Frame = 0
Query:   36 MTSRPR-TSGVGIGGVGCPPGPPNGRNXXXXXXXXXXXXXXXXXXQRATGGQKNGKPDPWLSGTAPACTTALAMSTDKTRLDRLSFGCPNLDAAFEGGVRVQGITEIAGEAGAGKTQLCLQLLLQAQLAPEAGGLGGKSYVLTCGEGDFPSRRLRQMAASYQSRHGVRPEKLMEGVCIQNARTLDDQMMIITEHLPHIMRSQNIKLVVIDSIAALFRSDMGRGRGDIGERSRLLGRLSQQMKRLGDRHGAAFVVVNQVTAKFGVSAVGGGGAXXXXXXDGGG--------NVPAMGLLWSSCINARFMVRRRDFRLSLQPSISSSSSSNFGQVGAPNPSHWQPRSLSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGGGFFDGRSSSSGRGGMGCAGRASSGNTPAMAREITLEMSPCVPVHAGCGFVIERDGVRGVG 469
            M SR R  SG GI GVGCPPGP  G N                  Q    G+ N KPDPWL+GTAP CTTALAM  +  RLDRLSFGCP+LDAAFEGGVRVQGITEIAGEAGAGKTQLCLQLLLQAQLAPEAGGLGGKSYVLTCGEGDFPSRRLRQMA++YQSRHGV+PEKLMEGVCIQNA+TLDDQMMII EHLPHIMRSQN+KLVVIDSIAALFRSD+G GRGDIGERSRLLGRLSQQMKRLGDRHGAAFVVVNQVTAKFG S +GGG  XXXXXX            +VPAMGLLWS CIN RF VRRRD+RLSLQP  SS S S   Q   PNP      SLS    XXXXXXXXXXXXXXXXXXXXXXXXXXXX                               A+AREITL+MSPCVPVHA CGFV+ER GVRGVG
Sbjct:    3 MDSRSRLVSGGGIRGVGCPPGPQYGVNRRQPPHGQQ---------QHRLSGKSN-KPDPWLAGTAPECTTALAMLKNAARLDRLSFGCPSLDAAFEGGVRVQGITEIAGEAGAGKTQLCLQLLLQAQLAPEAGGLGGKSYVLTCGEGDFPSRRLRQMASTYQSRHGVKPEKLMEGVCIQNAKTLDDQMMIIMEHLPHIMRSQNVKLVVIDSIAALFRSDLGCGRGDIGERSRLLGRLSQQMKRLGDRHGAAFVVVNQVTAKFGSSTIGGGXXXXXXXXXXXXXXXXXXXXSVPAMGLLWSQCINTRFKVRRRDYRLSLQPPPSSESGSR--QRATPNPRDQNSSSLSLPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXSAIAREITLDMSPCVPVHARCGFVVERSGVRGVG 424          
BLAST of mRNA_P-littoralis_Contig609.33.5 vs. uniprot
Match: D8LGE7_ECTSI (RECA_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGE7_ECTSI)

HSP 1 Score: 440 bits (1132), Expect = 2.050e-150
Identity = 236/303 (77.89%), Postives = 249/303 (82.18%), Query Frame = 0
Query:   36 MTSRPRT-SGVGIGGVGCPPGPPNGRNXXXXXXXXXXXXXXXXXXQRATGGQKNGKPDPWLSGTAPACTTALAMSTDKTRLDRLSFGCPNLDAAFEGGVRVQGITEIAGEAGAGKTQLCLQLLLQAQLAPEAGGLGGKSYVLTCGEGDFPSRRLRQMAASYQSRHGVRPEKLMEGVCIQNARTLDDQMMIITEHLPHIMRSQNIKLVVIDSIAALFRSDMGRGRGDIGERSRLLGRLSQQMKRLGDRHGAAFVVVNQVTAKFGVSAVGGGGAXXXXXXD------GGGNVPAMGLLWSSCINA 331
            M SR R  SG GI GVGCPPGP  G N                   R +G  K+ KPDPWL+GTAP CTTALAMS D  RLDRLSFGCP+LDAAFEGGVRVQG+TEIAGEAGAGKTQLCLQLLLQAQLAPEAGGLGGKSYVLTCGEGDFPSRRLRQMA++YQSRHGV+PEKLMEGVCIQNA+TLDDQMMII EHLPHIMRSQN+KLVVIDSIAALFRSDMGRGRGDIGERSRLLGRLSQQMKRLGDRHGAAFVVVNQVTA+FG S +GGGG              GGG+VPAMGLLWS CINA
Sbjct:    3 MDSRSRVVSGGGISGVGCPPGPQYGVNRRQSPHGQQP--------HRLSG--KSSKPDPWLAGTAPECTTALAMSKDAARLDRLSFGCPSLDAAFEGGVRVQGVTEIAGEAGAGKTQLCLQLLLQAQLAPEAGGLGGKSYVLTCGEGDFPSRRLRQMASTYQSRHGVKPEKLMEGVCIQNAKTLDDQMMIIMEHLPHIMRSQNVKLVVIDSIAALFRSDMGRGRGDIGERSRLLGRLSQQMKRLGDRHGAAFVVVNQVTARFGSSTIGGGGGRGQGTMGVVGGSGGGGSVPAMGLLWSQCINA 295          
BLAST of mRNA_P-littoralis_Contig609.33.5 vs. uniprot
Match: A0A4D9CSH0_9STRA (RECA_2 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CSH0_9STRA)

HSP 1 Score: 164 bits (415), Expect = 1.050e-42
Identity = 101/251 (40.24%), Postives = 149/251 (59.36%), Query Frame = 0
Query:  104 TALAMSTDKTRLDRLSFGCPNLDAAFEGGVRVQGITEIAGEAGAGKTQLCLQLLLQAQLAPEAGG---------LGGKSYVLTCGEGDFPSRRLRQMAASYQSRHGVRPEKLMEGVCIQNARTLDDQMMIITEHLPHIMRSQN---IKLVVIDSIAALFRSDMGRGRGDIGERSRLLGRLSQQMKRLGDRHGAAFVVVNQVTAKFGVSAVG---GGGAXXXXXXDGGGNVPAMGLLWSSCINARFMVRRRD 339
            TA  +  D+    R+S GCP LDA F GG+   G+ E++G AGAGKTQL LQLL+Q     EA           + G+S+ L+  EG  P++RL +MAA+         ++++E V I  A+ ++DQ+ ++T  LP ++   +   I+L VIDS++ALFR +    +GD  ER++++  +++QMKRL DR G  FVV NQVTA F  +  G   GG A       G G  PA+GL WS+C++ RF++ RRD
Sbjct:   41 TAYDLYQDEKHTRRVSLGCPVLDATFRGGLPGHGVVEVSGMAGAGKTQLMLQLLVQQVRDAEAEWRRAKYATPFVAGRSFYLST-EGPLPAKRLAEMAAATCPEDSGFAQRVLESVIIVEAKNVEDQLYLLTTQLPSLLGDASLGKIRLCVIDSMSALFRGEFSLSKGDTLERAKMIFTMAKQMKRLSDRWGLPFVVTNQVTADFAAATFGVWEGGNADVV----GDGVQPALGLSWSNCVHTRFLLSRRD 286          
BLAST of mRNA_P-littoralis_Contig609.33.5 vs. uniprot
Match: L8GYS6_ACACA (DNA repair protein XRCC3, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GYS6_ACACA)

HSP 1 Score: 161 bits (407), Expect = 3.600e-41
Identity = 103/263 (39.16%), Postives = 159/263 (60.46%), Query Frame = 0
Query:  100 PACTTALAMSTDKTRLDRLSFGCPNLDAAFEGGVRVQGITEIAGEAGAGKTQLCLQLLLQAQLAPEAGGLGGKS-YVLTCGEGDFPSRRLRQMAASYQSRHG-VRPEK-----LMEGVCIQNARTLDDQMMIITEHLPHIMRSQNIKLVVIDSIAALFRSDMGRGRGDIGERSRLLGRLSQQMKRLGDRHGAAFVVVNQVTAKFGVSAVGGGGAXXXXXXDGGGNVPAMGLLWSSCINARFMVRRRDFRLSLQPSISSSSSSN 355
            PA   ALA+++D +   +L  GCP LD    GG+  + ITEIAGEAG+GKTQLCLQL LQ QL PE GGLGG + Y+ T  EG+FP RRL Q+  +++ +H  V P +     L + + I++  ++D     + + +P +++ +N++LV++DSIAAL R + G G   + ERSR+L   + Q+K++ D+     VV+NQV+     S +                VPA+GL WS+CIN+R ++ +   R + + ++SSS+ SN
Sbjct:   91 PAPLPALALASDPSFTHKLKLGCPLLDQCLGGGLLPRHITEIAGEAGSGKTQLCLQLALQVQLPPEEGGLGGGAIYIGT--EGNFPQRRLDQLHEAFRHKHAHVFPPRRKGFDLRDNIYIKHVGSIDQLFHSMLKQVPPLVQQRNVRLVIVDSIAALLRYEYGSGTSQMVERSRVLFSQANQLKQIADQLQVVVVVINQVSDYVDDSRL----VLSDFAAHKKRVVPALGLAWSNCINSRLLLSKT--RSTYRGAVSSSTVSN 345          
BLAST of mRNA_P-littoralis_Contig609.33.5 vs. uniprot
Match: M4C671_HYAAE (RECA_2 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C671_HYAAE)

HSP 1 Score: 146 bits (369), Expect = 7.840e-37
Identity = 96/258 (37.21%), Postives = 132/258 (51.16%), Query Frame = 0
Query:   99 APACTTALAMSTDKTRLDRLSFGCPNLDAAFEGGVRVQGITEIAGEAGAGKTQLCLQLLLQAQLAPEAGGLGGKSYVLTCGEGDFPSRRLRQMAASYQSRHG-------------------VRPEKLMEGVCIQNARTLDDQMMIITEHLPHIMRSQNIKLVVIDSIAALFRSDMGRGRGDIGERSRLLGRLSQQMKRLGDRHGAAFVVVNQVTAKFGVSAVGGGGAXXXXXXDGGGNVPAMGLLWSSCINARFMVRR 337
            AP+  T  A S D T +  LS GC ++DA   GG R   +TE+ GEAGAGKTQLCLQLLLQ  L    GGL G +  + C EG    +RL  +A  Y  RH                    V P   ++G+ ++   T+DD + ++   LP ++   N KLV +DS+AA+FR +      D  ER+R +  ++  M+ L D++G  FV+ NQVT  F   +             G G  PA+GL WS CIN R M+ R
Sbjct:    3 APSALTLWA-SRDVTSIV-LSSGCDSIDALLNGGFRSSLLTEVCGEAGAGKTQLCLQLLLQCCLPRSLGGLQGTACYI-CTEGVMSIKRLHDLAHVYARRHDKAAVFGVGGKRKRREVTPTVTPSDFLDGIFVEQLYTVDDLLRLLQTRLPALLAEHNTKLVALDSVAAVFRLESTSSVKDATERARTMFYMANCMRILSDQYGVVFVLTNQVTGDFDARST----------THGNGLRPALGLSWSHCINQRLMITR 247          
BLAST of mRNA_P-littoralis_Contig609.33.5 vs. uniprot
Match: A0A6A3RU25_9STRA (RECA_2 domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3RU25_9STRA)

HSP 1 Score: 141 bits (355), Expect = 4.940e-35
Identity = 96/253 (37.94%), Postives = 130/253 (51.38%), Query Frame = 0
Query:  103 TTALAMSTDKTRLDRLSFGCPNLDAAFEGGVRVQGITEIAGEAGAGKTQLCLQLLLQAQLAPEAGGLGGKSYVLTCGEGDFPSRRLRQMAASYQSRHGV---------RPEK--------LMEGVCIQNARTLDDQMMIITEHLPHIMRSQNIKLVVIDSIAALFRSDMGRGRGDIGERSRLLGRLSQQMKRLGDRHGAAFVVVNQVTAKFGVSAVGGGGAXXXXXXDGGGNVPAMGLLWSSCINARFMVRRR 338
            TTALA+S        L  GC ++D    GG R   +TEI GEA AGKTQLCLQLLLQ  L    GGL G +  + C EG    +RL  +A  Y  R+G          R E+         ++G+ ++   T+DD M ++   LP ++  QN KLVV+DS+AA+FR +      +  ERSR +  L   M+ L D++G  FVV NQVT  F   +             G    PA+GL WS C+N R M+ R+
Sbjct:    4 TTALALSPPVV----LPSGCDSIDRLLAGGFRSGIVTEICGEASAGKTQLCLQLLLQCCLPRALGGLQGTACYI-CTEGVGSVKRLHDLAQVYARRYGAVLGVGAKRKRGEEAAKLTGSDFLDGIFVEQLYTVDDLMDLLQARLPGLLAEQNTKLVVLDSVAAVFRLESTSSVKEAAERSRAMFHLVNCMRILSDQYGVVFVVTNQVTGDFDPRST------------GNAMRPALGLSWSHCVNQRLMITRQ 239          
BLAST of mRNA_P-littoralis_Contig609.33.5 vs. uniprot
Match: UPI001CF104BC (DNA repair protein XRCC3-like isoform X1 n=2 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF104BC)

HSP 1 Score: 142 bits (359), Expect = 8.870e-35
Identity = 96/257 (37.35%), Postives = 137/257 (53.31%), Query Frame = 0
Query:   99 APACTTALAMSTDKTRLDRLSFGCPNLDAAFEGGVRVQGITEIAGEAGAGKTQLCLQLLLQAQLAPEAGGLGGKSYVLTCGEGDFPSRRLRQMAASYQ------SRHGVRPEKLMEGVCIQNARTLDDQMMIITEHLPHIMRSQNIKLVVIDSIAALFRSDMGRGRGDIGERSRLLGRLSQQMKRLGDRHGAAFVVVNQVT------AKFGVSAVGGGGAXXXXXXDGGGN----VPAMGLLWSSCINARFMVRRRD 339
            +PA  TAL++    ++  RLS GC  LD    GG+  QGITE+AGE+ +GKTQ+CLQL L  QL  E GGLGG +  ++  E  FPS+RL Q+   +       S   + P    + + I++A  +DD   IIT  LP ++    IKLV+IDSIAALFR +      +  +R+++L     Q+ +L  +H   FV VNQV+       K G+S                GN    +PA+GL WSS +  R M+ R +
Sbjct:   60 SPAMKTALSLHLGSSKGQRLSLGCQILDGCLHGGILKQGITEVAGESSSGKTQICLQLCLTVQLPEEKGGLGGGAVYIST-EDVFPSKRLHQLTQYFVKNQTNLSNSSINPS---DNIFIEHAADVDDLRNIITHRLPVLLNRGTIKLVIIDSIAALFRVEYSFS--ETSKRAKVLRSFGAQLHKLSHQHKIPFVCVNQVSDVIQSETKRGLS----------------GNHRAVIPALGLAWSSMLTMRLMLHRTE 294          
BLAST of mRNA_P-littoralis_Contig609.33.5 vs. uniprot
Match: A0A5D6XH12_9STRA (RECA_2 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XH12_9STRA)

HSP 1 Score: 140 bits (354), Expect = 9.030e-35
Identity = 97/257 (37.74%), Postives = 130/257 (50.58%), Query Frame = 0
Query:  103 TTALAMSTDKTRLDRLSFGCPNLDAAFEGGVRVQGITEIAGEAGAGKTQLCLQLLLQAQLAPEAGGLGGKS-YVLTCGEGDFPSRRLRQMAASYQSRHGV-------RP-------------EKLMEGVCIQNARTLDDQMMIITEHLPHIMRSQNIKLVVIDSIAALFRSDMGRGRGDIGERSRLLGRLSQQMKRLGDRHGAAFVVVNQVTAKFGVSAVGGGGAXXXXXXDGGGNVPAMGLLWSSCINARFMVRRR 338
            TTAL +   + +   L  G  +LDA   GG R   I+E+ GEA AGKTQLCLQLLLQ  L P  GGLG  + YV T G G    +RL ++A  Y  R G        RP                ++G+ ++     D+ + ++   LP ++  QN KLVVIDSIAALFR +      +   RSRL+  ++  ++ L  ++G  FVV NQVT  F         A       G    PA+GL WS+C+N R MV RR
Sbjct:    2 TTALELLHAQPQTAVLRSGVASLDALLRGGFRAGVISELCGEASAGKTQLCLQLLLQCALPPALGGLGASACYVSTEGVGSV--KRLHELAGVYARRFGSLASRKRKRPTDSSEESEGDANASAFLDGIFVEQLYESDELLDLLQSRLPALLEEQNTKLVVIDSIAALFRQEATASVKEASRRSRLMFHMANCIRILSAQYGVVFVVSNQVTGNF--------AAAPAEALQGSAFKPALGLSWSNCVNQRLMVTRR 248          
BLAST of mRNA_P-littoralis_Contig609.33.5 vs. uniprot
Match: A0A7S4M7I8_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4M7I8_9EUKA)

HSP 1 Score: 143 bits (361), Expect = 1.490e-34
Identity = 98/245 (40.00%), Postives = 135/245 (55.10%), Query Frame = 0
Query:   99 APACTTALAMSTD-KTRLDRLSFGCPNLDAAFEGGVRVQGITEIAGEAGAGKTQLCLQLLLQAQLAPEAGGLGGKSYVLTCGEGDFPSRRLRQMAASYQSRHGVRPEKLMEG---VCIQNARTLDDQMMIITEHLPHIMR--SQNIKLVVIDSIAALFRSDMGRGRGDIGERSRLLGRLSQQMKRLGDRHGAAFVVVNQVTAKFGVSAVGGGGAXXXXXXDGGGNVPAMGLLWSSCINARFMVRR 337
            APA  + L + TD K R  RLS GC  +D A  GG+  + ITE+ GE+ +GK+Q CLQL L   L+ E GGLGGK   ++   GDFP  R R MA  ++ + G R   + +    +   +A  L+    I+ + LP ++     NIKLVVIDSIAAL RS+    +    ER+R L  +S Q+++L D H  A VVVNQVT KF       G +           +P++GL WS  IN R M+R+
Sbjct:  119 APAKRSTLQLETDSKLRHRRLSIGCKIIDQALGGGIVTKSITEVVGESSSGKSQFCLQLSLCCPLSEEHGGLGGKVLYIST-NGDFPDSRFRTMACEFKEKMGSRGIDIADPPSQIFTLSAPDLEKLWSILNDQLPLLINRPEYNIKLVVIDSIAALVRSEYENNQSI--ERARSLWMISSQLRKLSDTHNFAVVVVNQVTDKFE-----NGSSVEMGFTPNKKLIPSLGLSWSKSINTRIMLRK 355          
BLAST of mRNA_P-littoralis_Contig609.33.5 vs. uniprot
Match: A0A8K1C2K3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2K3_PYTOL)

HSP 1 Score: 140 bits (352), Expect = 2.810e-34
Identity = 90/236 (38.14%), Postives = 126/236 (53.39%), Query Frame = 0
Query:  118 LSFGCPNLDAAFEGGVRVQGITEIAGEAGAGKTQLCLQLLLQAQLAPEAGGLGGKSYVLTCGEGDFPSRRLRQMAASYQSRHGVRPEK----------------LMEGVCIQNARTLDDQMMIITEHLPHIMRSQNIKLVVIDSIAALFRSDMGRGRGDIGERSRLLGRLSQQMKRLGDRHGAAFVVVNQVTAKFGVSAVGGGGAXXXXXXDGGGNVPAMGLLWSSCINARFMVRR 337
            LS GC ++D   +GG R   +TE+ GEA AGKTQLCLQLLLQ+ L P  GGLGG +  + C EG    +RL ++  +Y  ++G    K                L++ V I+    +D+ + ++   LP ++   + KLVVIDS+AA+FR +      D  ERSRL+  L+  M+ L  +    FV+ NQVT  F        GA          + PA+GL WSSCIN R M+RR
Sbjct:   22 LSSGCSSIDELLQGGFRSGILTEVCGEASAGKTQLCLQLLLQSCLPPVLGGLGGSACYI-CTEGIGSIKRLHELGHAYNQKYGSMLRKRRRTDVEQSSYNSMPSLLDSVFIEQVYEVDELVDVLQSRLPTLLADHDTKLVVIDSVAAVFRLESTGSVKDASERSRLMFHLANCMRILSAQFRVIFVMTNQVTGNFTE------GAASIVSTHSNQHKPALGLSWSSCINQRLMLRR 250          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig609.33.5 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KY82_9PHAE3.110e-16371.11RECA_2 domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LGE7_ECTSI2.050e-15077.89RECA_2 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A4D9CSH0_9STRA1.050e-4240.24RECA_2 domain-containing protein n=2 Tax=Monodopsi... [more]
L8GYS6_ACACA3.600e-4139.16DNA repair protein XRCC3, putative n=1 Tax=Acantha... [more]
M4C671_HYAAE7.840e-3737.21RECA_2 domain-containing protein n=1 Tax=Hyalopero... [more]
A0A6A3RU25_9STRA4.940e-3537.94RECA_2 domain-containing protein n=5 Tax=Phytophth... [more]
UPI001CF104BC8.870e-3537.35DNA repair protein XRCC3-like isoform X1 n=2 Tax=A... [more]
A0A5D6XH12_9STRA9.030e-3537.74RECA_2 domain-containing protein n=1 Tax=Pythium b... [more]
A0A7S4M7I8_9EUKA1.490e-3440.00Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A8K1C2K3_PYTOL2.810e-3438.14Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013632DNA recombination and repair protein Rad51-like, C-terminalPFAMPF08423Rad51coord: 103..338
e-value: 7.9E-44
score: 149.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 99..468
e-value: 2.3E-59
score: 202.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 115..299
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 394..413
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 353..432
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 353..386
NoneNo IPR availablePANTHERPTHR22942:SF63DNA REPAIR PROTEIN RAD57coord: 85..359
NoneNo IPR availablePANTHERPTHR22942RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBERcoord: 85..359
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainPROSITEPS50162RECA_2coord: 114..292
score: 35.650074

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig609contigP-littoralis_Contig609:83596..92290 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig609.33.5mRNA_P-littoralis_Contig609.33.5Pylaiella littoralis U1_48mRNAP-littoralis_Contig609 82776..92386 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig609.33.5 ID=prot_P-littoralis_Contig609.33.5|Name=mRNA_P-littoralis_Contig609.33.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=471bp
MILRSRSRASIHTSGGALPLPWRQQEERNEPKVVPMTSRPRTSGVGIGGV
GCPPGPPNGRNRRQSSQGQHQHQRQQQHQQRATGGQKNGKPDPWLSGTAP
ACTTALAMSTDKTRLDRLSFGCPNLDAAFEGGVRVQGITEIAGEAGAGKT
QLCLQLLLQAQLAPEAGGLGGKSYVLTCGEGDFPSRRLRQMAASYQSRHG
VRPEKLMEGVCIQNARTLDDQMMIITEHLPHIMRSQNIKLVVIDSIAALF
RSDMGRGRGDIGERSRLLGRLSQQMKRLGDRHGAAFVVVNQVTAKFGVSA
VGGGGAGTGGGRDGGGNVPAMGLLWSSCINARFMVRRRDFRLSLQPSISS
SSSSNFGQVGAPNPSHWQPRSLSSSSSSSSSPRGRCDQENPPLCDPGSIN
SSGSSSGGGGFFDGRSSSSGRGGMGCAGRASSGNTPAMAREITLEMSPCV
PVHAGCGFVIERDGVRGVGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013632DNA_recomb/repair_Rad51_C
IPR027417P-loop_NTPase
IPR020588RecA_ATP-bd