prot_P-littoralis_Contig609.26.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig609.26.1
Unique Nameprot_P-littoralis_Contig609.26.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length400
Homology
BLAST of mRNA_P-littoralis_Contig609.26.1 vs. uniprot
Match: D8LGE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGE3_ECTSI)

HSP 1 Score: 464 bits (1194), Expect = 2.460e-159
Identity = 275/403 (68.24%), Postives = 315/403 (78.16%), Query Frame = 0
Query:    1 MSGPLENMSALAAANSEVDVQQALQSPELWRRLELFRLALKSSSSSREGKNPDK-ERKLALGLLNELEPRLLFVAVDFSHGPAGDEIKRRAVEVSLLAVFGSSVGPDLLRENNAELVPFFLAGLCHPTPSVKILTAKALIALGLGXXXXXXXXXQPEE--DGGERADRCRALLQAPLLPALVAALGDGDTGAAQATADTLVSLCEEADRLQTAAVAXXXXXXXXXXDSETTTCRRAVMGALAAQLGEVVAGLTDRQASTPKFRFADTAARLMSTSDSAFNAAVDAGALSLVTNLTEDASDVLLQLNALELLEQVASTASGARHLIAKGHLDALLVSAGGGAGENSEAPDPLLGASALRTLAKVLAKTEGVGLDVWRERSPSFVEGFLHACTVHIEARDEASKV 400
            MSGPLENM  +  AN E +++Q +QS ELWRRL+L+RLAL SS S     +    ERKLALGLL ++EPRLLF+AVDFS+G AGDE+KRRAVE +LL+VFGS+VGP++ ++N  ELV FFLAGLCHP   V+ LTA A+ AL   XXXXXXXXX      +G ERA+RCR LLQ PLLPALVAALGDGDTGA+Q  ADTLV+LCEEAD    AAV               T CRRAVMGALA+Q+GEVVAGLT RQA+TPK RFAD A RLMS SDSAF AAVDAGALSLVT+LTEDASDVLLQLNAL+LL+QVASTA GA HL+A GHLD LLVSAGGG G++ EAPDPLLGASALRTLAKVLA+    GLD W++RSPS + GFL ACTVHIE +DEA KV
Sbjct:    1 MSGPLENMKYMKEANCEAEMKQRMQSQELWRRLDLYRLALLSSRSRETTADGGATERKLALGLLKDVEPRLLFLAVDFSYGQAGDEVKRRAVETALLSVFGSTVGPEIYQQNGTELVAFFLAGLCHPAAGVRTLTATAMGALXXXXXXXXXXXXXXXXXXEGRERAERCRTLLQPPLLPALVAALGDGDTGASQQVADTLVALCEEADGR--AAVTPTTG-------GRATGCRRAVMGALASQIGEVVAGLTARQAATPKLRFADIATRLMSASDSAFAAAVDAGALSLVTDLTEDASDVLLQLNALDLLDQVASTAGGALHLVANGHLDRLLVSAGGGEGDSPEAPDPLLGASALRTLAKVLARAADAGLDAWQQRSPSSLGGFLRACTVHIEGQDEAGKV 394          
BLAST of mRNA_P-littoralis_Contig609.26.1 vs. uniprot
Match: A0A6H5KYX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYX7_9PHAE)

HSP 1 Score: 324 bits (830), Expect = 1.250e-102
Identity = 203/401 (50.62%), Postives = 245/401 (61.10%), Query Frame = 0
Query:    1 MSGPLENMSALAAANSEVDVQQALQSPELWRRLELFRLALKSSSSSREGKNPDK-ERKLALGLLNELEPRLLFVAVDFSHGPAGDEIKRRAVEVSLLAVFGSSVGPDLLRENNAELVPFFLAGLCHPTPSVKILTAKALIALGLGXXXXXXXXXQPEEDGGERADRCRALLQAPLLPALVAALGDGDTGAAQATADTLVSLCEEADRLQTAAVAXXXXXXXXXXDSETTTCRRAVMGALAAQLGEVVAGLTDRQASTPKFRFADTAARLMSTSDSAFNAAVDAGALSLVTNLTEDASDVLLQLNALELLEQVASTASGARHLIAKGHLDALLVSAGGGAGENSEAPDPLLGASALRTLAKVLAKTEGVGLDVWRERSPSFVEGFLHACTVHIEARDEASKV 400
            MSGPLENM+++  AN E +++Q +QS ELWRRL+L+RLAL SS S     +    ERKLALGLL ++EPRLLF+AVDFS+G  GDE+KRRAVE +LL+VFGS+VGP++ +                                                                                 Q  ADTLV+LCEEAD       A              T CRRAVMGALA+Q+GEV+AGLT RQA+TPK RFAD A RLMS SDSAF AAVD+GAL+LVT+LTEDASDVLLQLNAL+LL++VASTA GARHL+A GHLD LLV+AGGG G++ +APDPLLGASALRTLAK            W++RSPS + GFL ACTVHIE +DE  K+
Sbjct:    1 MSGPLENMTSMKEANCETEIKQRMQSQELWRRLDLYRLALLSSRSRETTADGGATERKLALGLLKDVEPRLLFLAVDFSYGQTGDEVKRRAVETALLSVFGSTVGPEMYQ---------------------------------------------------------------------------------QQVADTLVALCEEADGRAAVTPATGGV---------ATGCRRAVMGALASQIGEVIAGLTARQAATPKLRFADIATRLMSASDSAFAAAVDSGALALVTDLTEDASDVLLQLNALDLLDRVASTAGGARHLVANGHLDKLLVAAGGGEGDSPDAPDPLLGASALRTLAKA-----------WKQRSPSSLGGFLRACTVHIEGQDEGGKL 300          
BLAST of mRNA_P-littoralis_Contig609.26.1 vs. uniprot
Match: A0A7S2R6Q6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6Q6_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 1.070e-10
Identity = 95/336 (28.27%), Postives = 139/336 (41.37%), Query Frame = 0
Query:   68 PRLLFVAVDFSHGPAGDEIKRRAVEVSLLAVFGSSVGPDLLRENNAELVPFFLAGLCHPTPSVKILTAKALIALGLGXXXXXXXXXQPEEDGGERADRCRALLQAPLLPALVAALGDGDTGAAQATADTLVSLCEEADRLQTAAVAXXXXXXXXXXDSETTTCRRAVMGALAAQLGEVVAGLTDRQASTPKFRFADTAARLMSTSDSAFNAAVDAGALSLVTNLTEDASDVLLQLNALELLEQVASTASGARHLIAKGHLDALLVSAGGGAGENSE-APDPLLGASALRTLAKVL---AKTEGVGLD-VWRERSPSFVEGFLHACTVHIEARDEAS 398
            PRL     D   G AG E  RR ++V L  +     G D  R  + E  PF +AG  HP  S++  +   L  L +          + E                 L+ ALV+ + D D   A   ++ L  L                       D +        + A+A      VA   D  A T   R AD    L  TSD  F AA   G L ++  LT+  SD+L QLN L+LLE+  + A   + +   G    L+ +A G A + +  +PDPLLG +ALR L+ +L   + + G  LD ++    P+ +  FL A T   ++ DEA+
Sbjct:   55 PRLFAELADV--GAAGQEPVRRVLDV-LAFLLAPPHGTD--RALSPETAPFLIAGTQHPASSIRQASVALLRRLAVDDVSSSSALAKQET----------------LVQALVSRVIDEDIQVATRASEALTGLATHG----------------MAQDMDAALMLLHTIAAVA------VAPPVDVNA-TLTLRCADLLVTLALTSDQVFEAAASRGDLDVLVALTKS-SDILAQLNVLDLLERCCTRACHVKFMFGSGIASWLIFAATGEASDGARGSPDPLLGGNALRVLSTILGSLSSSAGKDLDAMFSSADPALIRRFLRAVTALGDSPDEAN 345          
BLAST of mRNA_P-littoralis_Contig609.26.1 vs. uniprot
Match: A0A2K1L7Z7_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L7Z7_PHYPA)

HSP 1 Score: 56.2 bits (134), Expect = 6.600e-5
Identity = 66/234 (28.21%), Postives = 104/234 (44.44%), Query Frame = 0
Query:   90 AVEVSLLAVFGSSVGPDLLRENNAELVPFFLAGLCHPTPSVKILTAKALIALGLGXXXXXXXXXQPEEDGGERADRCRALLQAPLLPALVAALGDGDTGAAQATADTLVSLCEEADRLQTAAVAXXXXXXXXXXDSETTTCRRAVMGALAAQLGEVVAGLTDRQASTPKFRFADTAARLMSTSDSAFNAAVDAGALSLVTNLTEDASDVLLQLNALELLEQVASTASGARHLIA 323
            +V +SL  +F ++ G  LL     + + +   GL   +  V+ LT  A+  L  G           E DGG      RA+ +A L   L+ A+GDGD   A+A AD L  L      L+    A                      GA A  L +    +  + ++T + R    AA +   S+ A  A  D+G  +++    +++ D+L QLNALELL  +A+T+ GA+ L+A
Sbjct:   63 SVALSLERIFQTAYGKKLL----PQTLSYAGVGLKAESSLVRKLTCSAIGDLLEGG----------ETDGGAAV---RAIAEAHLAAPLLLAIGDGDAHVAKAAADALGKLARNPGGLELIFTAK---------------------GAGAGLLKD----MASQSSATVRIRALSMAASIFGISEEAAAAVQDSGIFTVLAAELDNSDDMLAQLNALELLCDLAATSHGAKFLLA 254          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig609.26.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LGE3_ECTSI2.460e-15968.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYX7_9PHAE1.250e-10250.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2R6Q6_9STRA1.070e-1028.27Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2K1L7Z7_PHYPA6.600e-528.21Uncharacterized protein n=2 Tax=Physcomitrium pate... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 106..368
e-value: 1.4E-11
score: 45.7
IPR01953826S proteasome non-ATPase regulatory subunit 5PANTHERPTHR1355426S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 5-RELATEDcoord: 97..363
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 96..361

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig609contigP-littoralis_Contig609:55709..59441 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig609.26.1mRNA_P-littoralis_Contig609.26.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig609 55709..59441 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig609.26.1 ID=prot_P-littoralis_Contig609.26.1|Name=mRNA_P-littoralis_Contig609.26.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=400bp
MSGPLENMSALAAANSEVDVQQALQSPELWRRLELFRLALKSSSSSREGK
NPDKERKLALGLLNELEPRLLFVAVDFSHGPAGDEIKRRAVEVSLLAVFG
SSVGPDLLRENNAELVPFFLAGLCHPTPSVKILTAKALIALGLGGGGGGG
GGGQPEEDGGERADRCRALLQAPLLPALVAALGDGDTGAAQATADTLVSL
CEEADRLQTAAVAAAAATTAATADSETTTCRRAVMGALAAQLGEVVAGLT
DRQASTPKFRFADTAARLMSTSDSAFNAAVDAGALSLVTNLTEDASDVLL
QLNALELLEQVASTASGARHLIAKGHLDALLVSAGGGAGENSEAPDPLLG
ASALRTLAKVLAKTEGVGLDVWRERSPSFVEGFLHACTVHIEARDEASKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR019538PSMD5
IPR016024ARM-type_fold