mRNA_P-littoralis_Contig608.26.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig608.26.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 131 bits (330), Expect = 1.580e-32 Identity = 65/161 (40.37%), Postives = 99/161 (61.49%), Query Frame = 2
Query: 2 AGAGMRSIAEHFVKPMKADEKKEH--HVRYVIMCCVDVRPFSMAERAGFQYFVGGLSPSYVQETIHKSTMENILDALAADVRTNLITKLKDYIVSCKELGWGGPFFGVQSDLTSTQGIEFCTLTVSFIPKGNTEMERLTLTTKAFPGTHTASDVDPWIREV 478
A A S +++ P K D+K+ +R+VI CC+++RP M GF+ F+G LSP YV+ T+ T + LD L + V+T+++ L+ C +G+ G F G Q DLT+ G E+ T TVS++ KG+T++ R+ L +AFPGTHTA D+ PWI E+
Sbjct: 182 ASASSSSSLVNYMVP-KLDKKRREMADLRFVIWCCINLRPQQMRHDDGFKLFLGALSPDYVESTMSNDTFDKNLDTLYSRVKTSIVDDLRTLREECLGMGYSGAFLGAQLDLTTVAGEEYITFTVSYVEKGSTDVTRVALACRAFPGTHTADDISPWIEEL 341
BLAST of mRNA_P-littoralis_Contig608.26.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 127 bits (319), Expect = 3.690e-31 Identity = 62/146 (42.47%), Postives = 89/146 (60.96%), Query Frame = 2
Query: 35 FVKPMKADEKKEH-HVRYVIMCCVDVRPFSMAERAGFQYFVGGLSPSYVQETIHKSTMENILDALAADVRTNLITKLKDYIVSCKELGWGGPFFGVQSDLTSTQGIEFCTLTVSFIPKGNTEMERLTLTTKAFPGTHTASDVDPWI 469
FV P +++E +RYVI CC++ RP M GF+ FVG LSP YV T+ +T +LD L V ++ L+ C +G+GG F G Q DLT+ G E+ T VS++ KG+T++ R++L T+AFPG+HTA D+ PWI
Sbjct: 4 FVAPKMLQKQREFVDLRYVIWCCINPRPMQMRYDDGFKLFVGALSPQYVDTTMASTTFNKLLDTLHDRVEQAVVDDLRSVREECLGMGYGGAFLGAQLDLTTVAGEEYITFAVSYVKKGDTDVSRVSLATRAFPGSHTADDIKPWI 149
BLAST of mRNA_P-littoralis_Contig608.26.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE) HSP 1 Score: 126 bits (316), Expect = 9.410e-31 Identity = 60/146 (41.10%), Postives = 91/146 (62.33%), Query Frame = 2
Query: 35 FVKPMKADEKKEH-HVRYVIMCCVDVRPFSMAERAGFQYFVGGLSPSYVQETIHKSTMENILDALAADVRTNLITKLKDYIVSCKELGWGGPFFGVQSDLTSTQGIEFCTLTVSFIPKGNTEMERLTLTTKAFPGTHTASDVDPWI 469
FV P +++E +RY+I CC+++RP M GF+ FVG LSP YV T+ +T +LD L ++ ++ L+ C +G+GG F G Q DLT+ G E+ T VS++ KG+T++ R++L T+AFPG+HTA D+ PWI
Sbjct: 4 FVAPKVLQKQREFADLRYMIWCCINLRPMQMRYDDGFKLFVGALSPQYVDTTMAATTFNKLLDTLHDRMKQAVVDDLRSVREECLGMGYGGAFLGAQLDLTTVAGEEYITFAVSYVKKGDTDVSRVSLATRAFPGSHTADDIKPWI 149
BLAST of mRNA_P-littoralis_Contig608.26.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 126 bits (316), Expect = 1.220e-30 Identity = 61/153 (39.87%), Postives = 91/153 (59.48%), Query Frame = 2
Query: 20 SIAEHFVKPMKADEKKEHHVRYVIMCCVDVRPFSMAERAGFQYFVGGLSPSYVQETIHKSTMENILDALAADVRTNLITKLKDYIVSCKELGWGGPFFGVQSDLTSTQGIEFCTLTVSFIPKGNTEMERLTLTTKAFPGTHTASDVDPWIREV 478
S+ + V M K R+V+ CC+D+RP + GF+ F+G LSP YV T+ KST LD L V ++++ +L+ +G+ GPF G Q DLT+ G E+ T TV+F+ KG+T+M R+ L +AFPG+HTA D+ PWI ++
Sbjct: 191 SLMNYMVPTMTKARKDAADRRFVLWCCIDLRPEQLRFDQGFKLFLGSLSPEYVTTTMAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKL 343
BLAST of mRNA_P-littoralis_Contig608.26.1 vs. uniprot
Match: A0A6H5KVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVP4_9PHAE) HSP 1 Score: 125 bits (315), Expect = 1.770e-30 Identity = 61/152 (40.13%), Postives = 90/152 (59.21%), Query Frame = 2
Query: 20 SIAEHFVKPMKADEKKEHHVRYVIMCCVDVRPFSMAERAGFQYFVGGLSPSYVQETIHKSTMENILDALAADVRTNLITKLKDYIVSCKELGWGGPFFGVQSDLTSTQGIEFCTLTVSFIPKGNTEMERLTLTTKAFPGTHTASDVDPWIRE 475
S+ + V M K R+V+ CC+D+RP + GF+ F+G LSP YV T+ KST LD L V ++++ +L+ +G+ GPF G Q DLT+ G E+ T TV+F+ KG+T+M R+ L +AFPG+HTA D+ PWI +
Sbjct: 1275 SLMNYMVPTMTKARKDAADRRFVLWCCIDLRPEQLRFDQGFKLFLGSLSPEYVTTTMAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEK 1426
BLAST of mRNA_P-littoralis_Contig608.26.1 vs. uniprot
Match: A0A6H5KFJ9_9PHAE (Fanconi-associated nuclease n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ9_9PHAE) HSP 1 Score: 124 bits (312), Expect = 4.330e-30 Identity = 60/152 (39.47%), Postives = 90/152 (59.21%), Query Frame = 2
Query: 23 IAEHFVKPMKADEKKEHHVRYVIMCCVDVRPFSMAERAGFQYFVGGLSPSYVQETIHKSTMENILDALAADVRTNLITKLKDYIVSCKELGWGGPFFGVQSDLTSTQGIEFCTLTVSFIPKGNTEMERLTLTTKAFPGTHTASDVDPWIREV 478
+A V M ++ +R+VI C+++RP M GF+ F+G LSP YV+ T+ T + LD L V T+++ L+ C +G+ G F G Q DLT+ G E+ T TVS++ KG+T++ R+ L +AFPGTHTA D+ PWI E+
Sbjct: 306 VAGDMVPKMDKKRREMADLRFVIWRCINLRPQQMRHDDGFKLFLGALSPDYVESTMSNDTFDKNLDTLYGKVNTSVVDDLRTLREECLGMGYSGAFLGAQLDLTTVAGEEYITFTVSYVKKGSTDVTRVALACRAFPGTHTADDIRPWIEEL 457
BLAST of mRNA_P-littoralis_Contig608.26.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 123 bits (308), Expect = 1.200e-29 Identity = 57/133 (42.86%), Postives = 85/133 (63.91%), Query Frame = 2
Query: 80 RYVIMCCVDVRPFSMAERAGFQYFVGGLSPSYVQETIHKSTMENILDALAADVRTNLITKLKDYIVSCKELGWGGPFFGVQSDLTSTQGIEFCTLTVSFIPKGNTEMERLTLTTKAFPGTHTASDVDPWIREV 478
R+V+ CC+D+RP + GF+ F+G LSP YV T+ KST LD L V ++++ +L+ +G+ GPF G Q DLT+ G E+ T TV+F+ KG+T+M R+ L +AFPG+HTA D+ PWI ++
Sbjct: 16 RFVLWCCIDLRPEQLRFDQGFKLFLGSLSPEYVTTTMAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKL 148
BLAST of mRNA_P-littoralis_Contig608.26.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE) HSP 1 Score: 112 bits (280), Expect = 5.750e-26 Identity = 60/143 (41.96%), Postives = 86/143 (60.14%), Query Frame = 2
Query: 50 KADEKKEH--HVRYVIMCCVDVRPFSMAERAGFQYFVGGLSPSYVQETIHKSTMENILDALAADVRTNLITKLKDYIVSCKELGWGGPFFGVQSDLTSTQGIEFCTLTVSFIPKGNTE-MERLTLTTKAFPGTHTASDVDPWI 469
K D+K+ +RYVI CC+++RP M GF+ FVG LSP YV T+ +T +LDAL V+ ++ L+ +G+GG F G DLT+ E+ T TVS++ KG T+ + R+ L T+AFPG+HTA D+ PWI
Sbjct: 4 KMDKKQRDLADLRYVIWCCINLRPQQMRYDDGFKLFVGVLSPQYVDTTMASTTFNKVLDALYDRVKQAIMDDLRLLREEFLGMGYGGAFLGAHLDLTTVANEEYITFTVSYVKKGKTDDVTRVALATRAFPGSHTAEDIKPWI 146
BLAST of mRNA_P-littoralis_Contig608.26.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE) HSP 1 Score: 108 bits (270), Expect = 1.880e-24 Identity = 56/160 (35.00%), Postives = 95/160 (59.38%), Query Frame = 2
Query: 2 AGAGMRSIAEHFV--KPMKADEKKEHHVRYVIMCCVDVRPFSMAERAGFQYFVGGLSPSYVQETIHKSTMENILDALAADVRTNLITKLKDYIVSCKELGWGGPFFGVQSDLTSTQGIEFCTLTVSFIPKGNTEMERLTLTTKAFPGTHTASDVDPWIRE 475
AG+ SI ++ P+ A + + R+V+ C +++RP +M G++ +G L P YV+ T+ +T +IL + + + T L+ + SC +LG+ GPF G Q DLT+ E+ T +VS+I + T + R+ L T+AFPG+HTA+D++PWI +
Sbjct: 163 AGSSTPSIKDYMQTGNPLLASTEAAANRRFVVWCAINMRPQNMRYDDGYKLHMGMLCPKYVESTMSDATFNSILSTIYTETCDAVKTGLRLHRESCVKLGYVGPFLGAQLDLTTVANEEYITFSVSYIAEAATTITRVGLATRAFPGSHTAADIEPWIEK 322
BLAST of mRNA_P-littoralis_Contig608.26.1 vs. uniprot
Match: UPI0019AE1995 (NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Microbacteriaceae bacterium TaxID=1873462 RepID=UPI0019AE1995) HSP 1 Score: 53.9 bits (128), Expect = 6.470e-6 Identity = 30/94 (31.91%), Postives = 52/94 (55.32%), Query Frame = 2
Query: 194 KSTMENILDALAADVRTNLITKLKDYIVSCKELGWGGPFFGVQSDLTSTQGIEFCTLTVSFIPKG---NTEMERLTLTTKAFPGTHTASDVDPW 466
+ + +L A V+ ++ +L+ S LG PF +Q D+T+T + FCTL+VSF+ + + M+++ L T++FP HTA+ V W
Sbjct: 95 REPFDKLLIAEYVTVKQQIVNELQQQYQS---LGHSLPFCSLQLDMTTTNNVAFCTLSVSFVKEAADSSFTMQKVNLVTRSFPHEHTAAQVQSW 185 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig608.26.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig608.26.1 >prot_P-littoralis_Contig608.26.1 ID=prot_P-littoralis_Contig608.26.1|Name=mRNA_P-littoralis_Contig608.26.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=155bp MRSIAEHFVKPMKADEKKEHHVRYVIMCCVDVRPFSMAERAGFQYFVGGLback to top mRNA from alignment at P-littoralis_Contig608:165483..165960+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig608.26.1 ID=mRNA_P-littoralis_Contig608.26.1|Name=mRNA_P-littoralis_Contig608.26.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=478bp|location=Sequence derived from alignment at P-littoralis_Contig608:165483..165960+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig608:165483..165960+ >mRNA_P-littoralis_Contig608.26.1 ID=mRNA_P-littoralis_Contig608.26.1|Name=mRNA_P-littoralis_Contig608.26.1|organism=Pylaiella littoralis U1_48|type=CDS|length=465bp|location=Sequence derived from alignment at P-littoralis_Contig608:165483..165960+ (Pylaiella littoralis U1_48)back to top |