prot_P-littoralis_Contig607.52.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig607.52.1
Unique Nameprot_P-littoralis_Contig607.52.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length553
Homology
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BLAST of mRNA_P-littoralis_Contig607.52.1 vs. uniprot
Match: A0A6H5K1N6_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1N6_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 2.000e-39
Identity = 90/173 (52.02%), Postives = 121/173 (69.94%), Query Frame = 0 
Query:  382 MTKKQIKEIQRQYATYNTGVFMKLPLLPLGE--DVNELVQFADTLSHVVEECRLGVGDHS-DSQWVRGWDRPVEKHVINAISSSRAGSTQEVLALKRKVNTAFIQTRAQMDKGVQGPQALDFLIRVLSKELSTVSPNAVVSELQNLVVAPGTPFKEYMSTLRSLVQNARSVGH 551
            ++K+Q+  I+++YATY+T   M+LPLL  G+   V E V  + TL   VEE RLG GD+S  S WVRGWD  +EKHV+N++SS    +  + L LK K+ ++F QTR Q+D G+ G +AL+FL+RVL++ LS  +P  VV  LQNL V  GTPF EYM+TLR+LVQNA SVGH
Sbjct:  449 LSKEQVTAIRQKYATYSTANLMRLPLLA-GQRMSVAETVSLSSTLVKNVEELRLGAGDNSKSSDWVRGWDIALEKHVLNSVSSRLPNA--QGLDLKAKITSSFSQTRQQLDNGMAGREALNFLVRVLTRTLSMATPQHVVFALQNLEVDAGTPFSEYMNTLRALVQNAMSVGH 618
[Close]
BLAST of mRNA_P-littoralis_Contig607.52.1 vs. uniprot
Match: A0A6H5KNG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNG1_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 2.710e-23
Identity = 60/154 (38.96%), Postives = 89/154 (57.79%), Query Frame = 0 
Query:  399 TGVFMKLPLLPL--GEDVNELVQFADTLSHVVEECRLGVGDHSDSQWVRGWDRPVEKHVINAISSSRAGSTQEVLALKRKVNTAFIQTRAQMDKGVQGPQALDFLIRVLSKELSTVSPNAVVSELQNLVVAPGTPFKEYMSTLRSLVQNARSVG 550
            T   + +PL PL  G+DV ELVQ +  ++  VE+ R    D     WVRGW++ +E+H+IN++  + A S     A K+ +  A  Q+   MD G+ GP AL  L+R +   LSTV+P  V+ +LQN  V  GT FK Y+  L+ LV++ + VG
Sbjct:    3 TKNLITMPLTPLQNGDDVVELVQLSSAITKSVEQIRASAQDFDSDHWVRGWEKVLERHLINSVRKNHAKSA----ATKQILVAAVNQSVRAMDSGMSGPDALQLLLRAVCSGLSTVTPALVLQQLQNFAVPAGTTFKAYLEDLKVLVESVQMVG 152
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig607.52.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K1N6_9PHAE2.000e-3952.02CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KNG1_9PHAE2.710e-2338.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..67
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig607contigP-littoralis_Contig607:124479..126137 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig607.52.1mRNA_P-littoralis_Contig607.52.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig607 124479..127890 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig607.52.1 ID=prot_P-littoralis_Contig607.52.1|Name=mRNA_P-littoralis_Contig607.52.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=553bp
MKTSSKSTRSVRARSQEACVVAGKPADTLGEQLTPPQLEQRARGGHSKDQ
KSHLTKNDDASEYTIPKKVPIQTRQVFNESVYERLEQQYPDLDGAALGDM
YLKEVAAASDAQAQETQRANKKAAFQAQVRLGMQPSAAVAPAPQVAQTEV
GLGQVEESPFPSRGGGGGGNQSFSPRGRGGGRFFGGRGGGRFNRGKRFQG
GNRGYGGEGSHHYGPQEQAFPFDQPMHGDSRTIYGYPPAHEGERTKRWEE
DEAEVTSKAHLKALFEISPRLKEFLRAHEALTGEGAVETPGHSDMQSVMN
QPAVSTDCQPKVLPQVKVEPSSTQPEKVTQCVKTEPPSTHSTAVSATVKP
TTNIATHVVDPSATVAPPAAPAANTEDSPVDMTKKQIKEIQRQYATYNTG
VFMKLPLLPLGEDVNELVQFADTLSHVVEECRLGVGDHSDSQWVRGWDRP
VEKHVINAISSSRAGSTQEVLALKRKVNTAFIQTRAQMDKGVQGPQALDF
LIRVLSKELSTVSPNAVVSELQNLVVAPGTPFKEYMSTLRSLVQNARSVG
HIA
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