mRNA_P-littoralis_Contig116.12.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig116.12.1 vs. uniprot
Match: A0A6H5KJT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJT6_9PHAE) HSP 1 Score: 96.7 bits (239), Expect = 3.750e-22 Identity = 46/108 (42.59%), Postives = 74/108 (68.52%), Query Frame = 1
Query: 4 YWNARGVDGV-DVAGNVVAPARWPHLSLLARLYAGVDTTSCQAERNFSALKQVLSDMRAGTLPRKIEQMLLLRLNRHLIPGFAKVERELAALKARHDANAKAAVAAQQ 324
+WN RG D V GNV +PA P+L+ +ARL+ G++ +SCQAERNFSAL ++ +R L RK+E+M+L+RLNRHL+ +++ ++ +A+ +A+ +VA Q+
Sbjct: 151 FWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVDEVRELDAAVSLARAKAAKSAQKSVACQE 258
BLAST of mRNA_P-littoralis_Contig116.12.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 1.280e-21 Identity = 48/108 (44.44%), Postives = 71/108 (65.74%), Query Frame = 1
Query: 4 YWNARGVDGVDVA-GNVVAPARWPHLSLLARLYAGVDTTSCQAERNFSALKQVLSDMRAGTLPRKIEQMLLLRLNRHLIPGFAKVERELAALKARHDANAKAAVAAQQ 324
YWN RG D V G V +PA P+L+ +ARLY G++ TSCQAERNFSAL ++ +R LP K+E+M+ +RLNRHL+ +++ + KA A++++AAQ+
Sbjct: 533 YWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAEVRELDAAVVKAKAAKTKVAQSSMAAQE 640
BLAST of mRNA_P-littoralis_Contig116.12.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 1.320e-21 Identity = 48/108 (44.44%), Postives = 71/108 (65.74%), Query Frame = 1
Query: 4 YWNARGVDGVDVA-GNVVAPARWPHLSLLARLYAGVDTTSCQAERNFSALKQVLSDMRAGTLPRKIEQMLLLRLNRHLIPGFAKVERELAALKARHDANAKAAVAAQQ 324
YWN RG D V G V +PA P+L+ +ARLY G++ TSCQAERNFSAL ++ +R LP K+E+M+ +RLNRHL+ +++ + KA A++++AAQ+
Sbjct: 728 YWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAEVRELDAAVVKAKAAKTKVAQSSMAAQE 835
BLAST of mRNA_P-littoralis_Contig116.12.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 96.7 bits (239), Expect = 4.560e-21 Identity = 46/108 (42.59%), Postives = 74/108 (68.52%), Query Frame = 1
Query: 4 YWNARGVDGV-DVAGNVVAPARWPHLSLLARLYAGVDTTSCQAERNFSALKQVLSDMRAGTLPRKIEQMLLLRLNRHLIPGFAKVERELAALKARHDANAKAAVAAQQ 324
+WN RG D V GNV +PA P+L+ +ARL+ G++ +SCQAERNFSAL ++ +R L RK+E+M+L+RLNRHL+ +++ ++ +A+ +A+ +VA Q+
Sbjct: 716 FWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVDEVRELDAAVSLARAKAAKSAQKSVACQE 823
BLAST of mRNA_P-littoralis_Contig116.12.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE) HSP 1 Score: 90.5 bits (223), Expect = 6.030e-19 Identity = 43/94 (45.74%), Postives = 63/94 (67.02%), Query Frame = 1
Query: 4 YWNARGVDGV-DVAGNVVAPARWPHLSLLARLYAGVDTTSCQAERNFSALKQVLSDMRAGTLPRKIEQMLLLRLNRHLIPGFAKVERELAALKA 282
+WN RG + V G V APA P+L+ +ARL+ G++ TSCQAERNFSAL ++ +R L RK+E+M+L+RLNRHL+ ++ +A +A
Sbjct: 411 FWNRRGTNSVCPTTGKVTAPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGTLRCNMLARKVERMMLIRLNRHLLAEVRALDAAVAQARA 504
BLAST of mRNA_P-littoralis_Contig116.12.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 2.930e-18 Identity = 44/108 (40.74%), Postives = 69/108 (63.89%), Query Frame = 1
Query: 4 YWNARGVDGVDVA-GNVVAPARWPHLSLLARLYAGVDTTSCQAERNFSALKQVLSDMRAGTLPRKIEQMLLLRLNRHLIPGFAKVERELAALKARHDANAKAAVAAQQ 324
+WN RG D V A G V +PA P+L+ +ARL+ G++ TSCQAERNFSAL ++ ++R LP ++E+M+L+RLNR ++ + ++ + NA + AAQ+
Sbjct: 425 FWNRRGTDSVRAATGQVTSPADMPYLAFIARLHLGIEATSCQAERNFSALAHLIGNLRCNMLPHRVERMMLIRLNRRMLDEVRAFDAAVSRAREMATKNAAKSAAAQE 532
BLAST of mRNA_P-littoralis_Contig116.12.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 87.4 bits (215), Expect = 7.770e-18 Identity = 39/79 (49.37%), Postives = 57/79 (72.15%), Query Frame = 1
Query: 4 YWNARGVDGVDVA-GNVVAPARWPHLSLLARLYAGVDTTSCQAERNFSALKQVLSDMRAGTLPRKIEQMLLLRLNRHLI 237
+WN RG D V A G V +PA P+L+ +ARL+ G++ TSCQAERNFSAL ++ D+ L ++E+M+L+RLN+HL+
Sbjct: 529 FWNRRGTDSVSAATGKVTSPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGDLCCNMLSHRVERMMLVRLNKHLL 607
BLAST of mRNA_P-littoralis_Contig116.12.1 vs. uniprot
Match: A0A6H5L7P7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7P7_9PHAE) HSP 1 Score: 84.0 bits (206), Expect = 1.130e-17 Identity = 38/75 (50.67%), Postives = 53/75 (70.67%), Query Frame = 1
Query: 4 YWNARGVDGVDVA-GNVVAPARWPHLSLLARLYAGVDTTSCQAERNFSALKQVLSDMRAGTLPRKIEQMLLLRLN 225
+WN RG D V A G V +PA P+L+ +ARL+ G++ TSCQAERNFSAL ++ D R L ++E+M+L+RLN
Sbjct: 146 FWNRRGTDSVSAATGKVTSPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGDFRCNMLSHRVERMMLVRLN 220
BLAST of mRNA_P-littoralis_Contig116.12.1 vs. uniprot
Match: A0A6H5KAS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS2_9PHAE) HSP 1 Score: 82.0 bits (201), Expect = 5.150e-16 Identity = 43/103 (41.75%), Postives = 64/103 (62.14%), Query Frame = 1
Query: 16 RGVDGVD-VAGNVVAPARWPHLSLLARLYAGVDTTSCQAERNFSALKQVLSDMRAGTLPRKIEQMLLLRLNRHLIPGFAKVERELAALKARHDANAKAAVAAQ 321
RG V G V +PA P+L+ +ARLY G++ TSCQAERNFSA ++ +R LP K E+ + +RLNRHL+ +++ +A KA A++++AAQ
Sbjct: 326 RGTSSVSPTTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSARSHLIGQLRCKILPSKFERTMFIRLNRHLVAEVRELDAAVAQAKATATKTAQSSMAAQ 428
BLAST of mRNA_P-littoralis_Contig116.12.1 vs. uniprot
Match: D7G031_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G031_ECTSI) HSP 1 Score: 81.6 bits (200), Expect = 8.460e-16 Identity = 45/88 (51.14%), Postives = 55/88 (62.50%), Query Frame = 1
Query: 4 YWNARGVDGVDVA-GNVVAPARWPHLSLLARLYAGVDTTSCQAERNFSALK--------QVLSDMRAGTLPRKIEQMLLLRLNRHLIP 240
YW G D +D G VV ARWPHL+L+ARLYAG+D+TS Q ER+F V S R G P +IEQMLL+RLNRH++P
Sbjct: 813 YWRLHGTDTLDSGTGEVVLAARWPHLALVARLYAGIDSTSRQGERHFGGGSGGGAELGAAVRSLQRGGMPPWRIEQMLLVRLNRHVVP 900 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig116.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig116.12.1 >prot_P-littoralis_Contig116.12.1 ID=prot_P-littoralis_Contig116.12.1|Name=mRNA_P-littoralis_Contig116.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=109bp KYWNARGVDGVDVAGNVVAPARWPHLSLLARLYAGVDTTSCQAERNFSALback to top mRNA from alignment at P-littoralis_Contig116:61519..61847- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig116.12.1 ID=mRNA_P-littoralis_Contig116.12.1|Name=mRNA_P-littoralis_Contig116.12.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=329bp|location=Sequence derived from alignment at P-littoralis_Contig116:61519..61847- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig116:61519..61847- >mRNA_P-littoralis_Contig116.12.1 ID=mRNA_P-littoralis_Contig116.12.1|Name=mRNA_P-littoralis_Contig116.12.1|organism=Pylaiella littoralis U1_48|type=CDS|length=327bp|location=Sequence derived from alignment at P-littoralis_Contig116:61519..61847- (Pylaiella littoralis U1_48)back to top |