prot_P-littoralis_Contig606.32.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig606.32.2
Unique Nameprot_P-littoralis_Contig606.32.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length332
Homology
BLAST of mRNA_P-littoralis_Contig606.32.2 vs. uniprot
Match: D7FHY1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHY1_ECTSI)

HSP 1 Score: 525 bits (1353), Expect = 2.620e-186
Identity = 276/332 (83.13%), Postives = 297/332 (89.46%), Query Frame = 0
Query:    1 MAGRSSRSGGNSNERIQALVEQKLGEGLQYEALQLYRGVVSRKSARGNDDAALAIAEQGIGVLLGRGFPDSATELGNVLVGILSDHELPPTEERVGVIKRVNAKYEDAKRASILAEEDRQAEREDG-GVEGEVADGVTGEKEAARGMYSVGVLQGRFLKLAVAWTAARGQRLSGDPGLCGLLGRCLWNEGDLDRGMRYLVLGERPQELCDLIMQDVLDEKARELAVARGVLQFASKASLRDANALMDAYKNQTGGTVSTKGALGFCVLLLKTCEYDAAPVFQKILDIYREDLSVDDALFGFVETIAMTYFNLRLRPPSMLDNIMGMLGGMPK 331
            MAGRSSRSGGNSNERIQ LVEQKLGEGLQYEALQLYRGVVSRKSARGND+AAL IAEQGIGVLL RG+ DSATELGNVLVGIL+DHELP TEER+ + +RVNAKYEDAKRA++LAEEDR+   ++G G  GEV +G    KEA RGMYSVGVLQGRFLKLAVAWTAARGQRLSGDPGLCGLLGRCLWNEGDL+RG RYLVLGERPQELCDLI+QDV D  ARELAVA+GVLQFASKASLRDANAL+ AYK QTGG   TKG LGFC +LLKTCEYDA PVFQK+LD Y+ DLS D+ALFG VE+IAMTYFNLRLRPPSMLDNIMGMLGGMPK
Sbjct:    1 MAGRSSRSGGNSNERIQLLVEQKLGEGLQYEALQLYRGVVSRKSARGNDNAALTIAEQGIGVLLARGYADSATELGNVLVGILNDHELPVTEERLELFRRVNAKYEDAKRAAVLAEEDRRTAAQEGQGGVGEVEEG----KEAGRGMYSVGVLQGRFLKLAVAWTAARGQRLSGDPGLCGLLGRCLWNEGDLERGTRYLVLGERPQELCDLILQDVSDANARELAVAKGVLQFASKASLRDANALLAAYKTQTGGKQPTKGVLGFCAMLLKTCEYDATPVFQKLLDAYQADLSKDEALFGSVESIAMTYFNLRLRPPSMLDNIMGMLGGMPK 328          
BLAST of mRNA_P-littoralis_Contig606.32.2 vs. uniprot
Match: A0A835ZB05_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB05_9STRA)

HSP 1 Score: 191 bits (486), Expect = 2.520e-55
Identity = 134/329 (40.73%), Postives = 193/329 (58.66%), Query Frame = 0
Query:    1 MAGRSSRSGGN-SNERIQALVEQKLGEGLQYEALQLYRGVVSRKSARGNDDAALAIAEQGIGVLLGRGFPDSATELGNVLVGILSDHELPPTEERVGVIKRVNAKYEDAKRASILAEEDRQAEREDGGVEGEVAD-GVTGEKEAARGMYSVGVLQGRFLKLAVAWTAARGQRLSGDPGLCGLLGRCLWNEGDLDRGMRYLVLGERPQELCDLIMQDVLDEKARELAVARGVLQFASKASLRDANALMDAYKNQTGGTVSTKGALGFCVLLLKTCEYDAAPVFQKILDIYREDLSVDDALFGFVETIAMTYFNLRLRPPSMLDNIMGMLG 327
            +AGRS+R  GN + ER++A+VE+KL  GL+YEALQLYRG  +RK+ARG+ D+A A+AE G  VL+ RGF DSA+EL   LV I  ++    T+ER+  I+R++A Y++             A +  G ++G+ ++ G+   ++    + S   LQ +FLK AVAWTAA G R +GD  L  L GRCL+  G+ + G   +V GE+P EL  L+M               GVL F +  +LRDANA   A++       +  GA  F  LL  TCE DAAP+FQ++ +  R   S D A+   +  I   +F++ L PPSMLD+I+ M+G
Sbjct:    5 LAGRSTRRQGNGAAERVKAMVEEKLDAGLEYEALQLYRGQAARKAARGDFDSAAAMAETGAQVLMQRGFADSASELSRQLVEIYKENGCDVTQERLDRIQRLDALYQEV------------ANKGPGELKGKGSEAGIAQARQVRHPVQSGFELQAKFLKAAVAWTAAAGPRPAGDAALNALPGRCLFAMGNAEAGTSRMVAGEQPIELRLLMM---------------GVLHFLALGNLRDANAQRAAWEAAAAPERARGGAQQFVRLLCATCERDAAPLFQRLAEAMRA--SGDPAVEKHLAQIGRVFFSI-LPPPSMLDSILKMMG 303          
BLAST of mRNA_P-littoralis_Contig606.32.2 vs. uniprot
Match: D7G1P9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1P9_ECTSI)

HSP 1 Score: 154 bits (389), Expect = 1.560e-42
Identity = 79/104 (75.96%), Postives = 86/104 (82.69%), Query Frame = 0
Query:  146 MYSVGVLQGRFLKLAVAWTAARGQRLSGDPGLCGLLGRCLWNEGDLDRGMRYLVLGERPQELCDLIMQDVLDEKARELAVARGVLQFASKASLRDANALMDAYK 249
            MYS    QGRFLKLAVAWT ARGQRL  D GLCGL+GRCLWNEG+L+RG RY VLGERPQELCDLI+QDV D  AR+LAV +GVLQFA K SLRDANAL+ A K
Sbjct:    7 MYS----QGRFLKLAVAWTTARGQRLRDDSGLCGLVGRCLWNEGELERGTRYHVLGERPQELCDLILQDVSDANARKLAVGKGVLQFARKRSLRDANALLAANK 106          
BLAST of mRNA_P-littoralis_Contig606.32.2 vs. uniprot
Match: A0A4D8ZBZ7_SALSN (Uncharacterized protein n=5 Tax=Salvia splendens TaxID=180675 RepID=A0A4D8ZBZ7_SALSN)

HSP 1 Score: 76.3 bits (186), Expect = 6.220e-12
Identity = 53/184 (28.80%), Postives = 88/184 (47.83%), Query Frame = 0
Query:  156 FLKLAVAWTAARGQRLSGDPGLCGLLGRCLWNEG---DLDRGMRYLVLGERPQELCDLIMQDV--LDEKARELAVARGVLQFASKASLRDANALMDAYKNQT---GGTVSTKGALGFCVLLLKTCEYDAAPVFQKILDIYREDLSVDDALFGFVETIAMTYFNLRLR---PPSMLDNIMGMLGG 328
            FL+ A+ W+   G   +G P +  +L   L+ E    D+ R   + V G  P++    ++  +        +LAVAR VL + ++ +LRDA  LMD  K Q    G  +     + F   LL+T + DA P+F  +LD YR+ +S +      ++ IA  ++ ++ R   P  M   I  M+ G
Sbjct:  161 FLRAAIKWSTEFGGPRNGSPEIHDMLADYLYTESPELDMSRVTYHFVRGRNPKKFASTLVNFMGKCYPGEDDLAVARAVLMYLAQGNLRDAIVLMDEIKKQEQSQGVNIPQSDLMQFTSFLLETLQRDALPLFNMLLDRYRQSISRERLFNELLDEIAEKFYGVQRRNSMPGGMFGEIFKMMAG 344          
BLAST of mRNA_P-littoralis_Contig606.32.2 vs. uniprot
Match: UPI00200957EE (protein GET4 isoform X2 n=2 Tax=Salvia TaxID=21880 RepID=UPI00200957EE)

HSP 1 Score: 73.9 bits (180), Expect = 1.760e-11
Identity = 53/186 (28.49%), Postives = 91/186 (48.92%), Query Frame = 0
Query:  156 FLKLAVAWTAARGQRLSGDPGLCGLLGRCLWNEG---DLDRGMRYLVLGERPQELCDLIMQDVLDE---KARELAVARGVLQFASKASLRDANALMDAYKNQT----GGTVSTKGALGFCVLLLKTCEYDAAPVFQKILDIYREDLSVDDALFGFVETIAMTYFNLRLR---PPSMLDNIMGMLGG 328
            FL+ A+ W+   G + +G P +  +L   L+ E    D+ +   + V G+ P++   L + + + +      +LAVAR VL + ++ +LRDA  LMD  K Q     G        + F   LL+T + DA P+F  ++D YR+ +S +      ++ IA  ++ +R R   P  M   I  M+ G
Sbjct:   80 FLRAAIKWSTEFGGQRNGSPEIHDMLADYLYTESPELDMSKVTYHFVRGKNPKKFA-LTLVNFMGKCYPGEDDLAVARAVLMYLAQGNLRDAIILMDEIKKQVQQSEGVNFPQSDLMQFTNFLLETLQRDALPLFNMLVDRYRQSISREPLFNELLDEIAEKFYGVRRRNSMPGGMFGEIFKMMAG 264          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig606.32.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FHY1_ECTSI2.620e-18683.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZB05_9STRA2.520e-5540.73Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G1P9_ECTSI1.560e-4275.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A4D8ZBZ7_SALSN6.220e-1228.80Uncharacterized protein n=5 Tax=Salvia splendens T... [more]
UPI00200957EE1.760e-1128.49protein GET4 isoform X2 n=2 Tax=Salvia TaxID=21880... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 98..118
NoneNo IPR availablePANTHERPTHR12875:SF0GOLGI TO ER TRAFFIC PROTEIN 4 HOMOLOGcoord: 12..325
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 5..329
e-value: 9.3E-44
score: 152.1
IPR007317Golgi to ER traffic protein 4PFAMPF04190GET4coord: 48..326
e-value: 1.4E-33
score: 116.8
IPR007317Golgi to ER traffic protein 4PANTHERPTHR12875UNCHARACTERIZEDcoord: 12..325

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig606contigP-littoralis_Contig606:158063..161823 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig606.32.2mRNA_P-littoralis_Contig606.32.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig606 157377..161918 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig606.32.2 ID=prot_P-littoralis_Contig606.32.2|Name=mRNA_P-littoralis_Contig606.32.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=332bp
MAGRSSRSGGNSNERIQALVEQKLGEGLQYEALQLYRGVVSRKSARGNDD
AALAIAEQGIGVLLGRGFPDSATELGNVLVGILSDHELPPTEERVGVIKR
VNAKYEDAKRASILAEEDRQAEREDGGVEGEVADGVTGEKEAARGMYSVG
VLQGRFLKLAVAWTAARGQRLSGDPGLCGLLGRCLWNEGDLDRGMRYLVL
GERPQELCDLIMQDVLDEKARELAVARGVLQFASKASLRDANALMDAYKN
QTGGTVSTKGALGFCVLLLKTCEYDAAPVFQKILDIYREDLSVDDALFGF
VETIAMTYFNLRLRPPSMLDNIMGMLGGMPK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR007317GET4