prot_P-littoralis_Contig606.10.2 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig606.10.2 vs. uniprot
Match: D7FGV7_ECTSI (Similar to PHD finger family protein, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV7_ECTSI) HSP 1 Score: 76.6 bits (187), Expect = 1.610e-12 Identity = 53/142 (37.32%), Postives = 75/142 (52.82%), Query Frame = 0
Query: 26 VCLLCDSNLPDVGRGIVTCGHVFCFACIIARCKTDTACPQCRDIVQDITKTLTEEEVKKEQDRKERHLVTIRHLVEMKKSPQEKSEAARLRRSKAARLKRKTNRLQCPMEGVFTKMFRVHEKKQKKSSTVALGQQVPAPHPQ 167
+C +C LP++ RG+++CGHVFCFACI K + CP CR ++ ITKTL+ + K + + +V+ R MKK P+++ + AR R S+A P G TK RV K S + QQ APHPQ
Sbjct: 175 MCAICCDKLPNLERGVLSCGHVFCFACIHQWTKNSSICPGCRVQIKRITKTLSPADEAKAKGETRKPVVSQRG---MKKKPRKQLKRARHRDSRAKN----------PASGFVTKTVRVRPK----SLKMTPAQQRAAPHPQ 299
BLAST of mRNA_P-littoralis_Contig606.10.2 vs. uniprot
Match: A0A6H5K2A7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2A7_9PHAE) HSP 1 Score: 66.6 bits (161), Expect = 3.570e-9 Identity = 55/171 (32.16%), Postives = 77/171 (45.03%), Query Frame = 0
Query: 26 VCLLCDSNLPDVGRGIVTCGHVFCFACIIARCKTDTACPQCRDIVQDITKTLT--EEEVKKEQDRKERHLVTIRH---------------------------LVEMKKSPQEKSEAARLRRSKAARLKRKTNRLQCPMEGVFTKMFRVHEKKQKKSSTVALGQQVPAPHPQ 167
+C +C LPD+ RG+++CGHVFCFACI K + CP CR ++ ITKTL+ +E K + RK L R LV ++ ++K R + R +R+ +R + P G TK RV K S + QQ APHPQ
Sbjct: 79 MCAICCDKLPDLERGVLSCGHVFCFACIHQWTKNSSICPGCRVQIKRITKTLSPADEAKSKGETRKPVSLAVTRQRGWRSLFLPVERAFRLCLFARFLGPLFLVVSQRGMKKKV------RKQLKRARRRDSRAKNPAAGFVTKTVRVRPK----SLKMTPAQQRAAPHPQ 239
BLAST of mRNA_P-littoralis_Contig606.10.2 vs. uniprot
Match: A0A6H5L829_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L829_9PHAE) HSP 1 Score: 65.5 bits (158), Expect = 1.490e-8 Identity = 36/101 (35.64%), Postives = 56/101 (55.45%), Query Frame = 0
Query: 13 TSSLASAQEEPDEVCLLCDSNLPDVGRGIVTCGHVFCFACI---IARCKTDTACPQCRDIVQDITKTLTEEEVKKEQDRKERHLVTIRHLVEMKKSPQEKS 110
T A+ + E+C++C LPD+ RGI+ CGH FCF CI +R CP CR I KTL+ ++V+KE+ R E + ++ + K S ++K+
Sbjct: 44 TKKAAADDAKKGELCIICQEALPDIERGIIACGHTFCFGCIHTWSSRSGDSVLCPSCRVPFNKIKKTLSPKDVEKEKLRNEVDKIFVKDIRVRKMSKKKKA 144
BLAST of mRNA_P-littoralis_Contig606.10.2 vs. uniprot
Match: D7FGW0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGW0_ECTSI) HSP 1 Score: 62.0 bits (149), Expect = 2.350e-7 Identity = 33/70 (47.14%), Postives = 46/70 (65.71%), Query Frame = 0
Query: 25 EVCLLCDSNLPDVGRGIVTCGHVFCFACII--ARCKTDTA-CPQCRDIVQDITKTLTEEEVKKEQDRKER 91
E+C++C LPD+ RGI+ CGH FCF CI A + D+A CP CR I KTL+ ++++KE+ R ER
Sbjct: 56 ELCIICLEALPDIERGIIACGHTFCFGCIHDWASNRGDSALCPSCRFPFNKIKKTLSPKDIEKEKLRNER 125 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig606.10.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 4
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig606.10.2 ID=prot_P-littoralis_Contig606.10.2|Name=mRNA_P-littoralis_Contig606.10.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=253bpback to top |