mRNA_P-littoralis_Contig606.9.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig606.9.1 vs. uniprot
Match: D7FI09_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI09_ECTSI) HSP 1 Score: 539 bits (1389), Expect = 2.630e-192 Identity = 257/314 (81.85%), Postives = 284/314 (90.45%), Query Frame = 1
Query: 1 MGRGVAYDSGLSVTPATMTTCTGEAFSNVSRGDYHIPDRRGVSAKNFSVKPQDRAKPFLHESVYEHDFRNFSQEVEGLDREGGGEREEMDGQNAFKREFKRLDAGNGVVHIRDMPRLIQGVLGRDVRPWIQDRVLKMFEANRDGKVSWLDLQDGLRKVVESIRADVSHREREMPEWLVANRKVKPAVTRGQVTDSCYQMDMGKDGEIPRDRRVWYKTGMSSTTLDLFGGTTKATYQVPGYGGFIPASRMNQRAREHGDMKDSRPQALDLRLFYRHNTPGYTGHAPSAACNDPGPAYCGSNALTTSGAAALGHIL 942
MGRGVAY++G+++ P TMTTC+ EAFSNV+RGDY +PDRRGVSAK+FS KPQDR+KPFLH+S+YEHDFRNFS EV+GLD G E DG+NAFKREF RLDAGNGVVHIRDMP+LIQGVLGRDVRPWI DR+LKMFEA RDGKV+WLDLQDGLRKV ES R+DVS++EREMPEWLVANRKV PAVT GQVT+SCYQMDMGKDGEIPRDRR+WYKTGMSSTTLDLF GTTKATYQVPGYGGFIPAS+MN RAREHGDMK+SR LDLRLFYRHN PGYTGHAP+AACNDPGP+ CGS+ LTTSGAAALG IL
Sbjct: 1 MGRGVAYENGVALAPPTMTTCSSEAFSNVTRGDYQVPDRRGVSAKHFSAKPQDRSKPFLHDSLYEHDFRNFSDEVDGLDGGEGPRGGERDGENAFKREFDRLDAGNGVVHIRDMPKLIQGVLGRDVRPWILDRILKMFEAKRDGKVTWLDLQDGLRKVAESARSDVSYKEREMPEWLVANRKVMPAVTHGQVTESCYQMDMGKDGEIPRDRRIWYKTGMSSTTLDLFEGTTKATYQVPGYGGFIPASKMNLRAREHGDMKNSRRPRLDLRLFYRHNNPGYTGHAPAAACNDPGPSRCGSDPLTTSGAAALGIIL 314
BLAST of mRNA_P-littoralis_Contig606.9.1 vs. uniprot
Match: A0A835ZLH4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLH4_9STRA) HSP 1 Score: 212 bits (540), Expect = 1.040e-62 Identity = 126/340 (37.06%), Postives = 184/340 (54.12%), Query Frame = 1
Query: 1 MGRGVAYDSGLSVTP-ATMTTCTGEAFSNVSRGDYHIPDRRGVSAKNFSVKPQDRAKPFLHESVYEHDFRNFSQEVEGLD---------------REGGGEREEMDGQNAFKREFKRLDA---------GNGVVHIRDMPRLIQGVLGRDVRPWIQDRVLKMFEANRDGKVSWLDLQDGLRKVVESIRADVSHRERE-MPEWLVANRKVKPAVTRGQVTDSCYQMDMGKDGEIPRDRRVWYKTGMSSTTLDLFGGTTKATYQVPGYGGFIPASRMNQRAREHGDMKDSRPQALDLRLFYRHNTPGYTGHAPSAACNDPGPAYCGSNALTTSGAAALGHIL 942
+G GV Y+ G + AT+ T + E+ S+V++ D+ P +RG A + R KPFLH ++++ +R+ +QE+EG R+ + G + + + + +P L+ V + R W+ DR+ K E +R G+V W L +V+ + D S R MPEW++ +RK P + G+ SCYQ D+G G P R++ +K GM TT DLF GTTK T+ VPGYGGFIPAS++N RA +HGDM+D+R + +LRLF++HN GYTGH AACND G CG++ TTSGAAALG +L
Sbjct: 46 VGHGVQYNEGPPIDEHATIKTVSAESTSHVTKQDFRPPGKRGCQAATAAAAVA-RTKPFLHSTLHKESYRDINQEIEGFAAASVEAYRCAFLAAARDVQATSISLCGSSGXXXXXXXXXXXXXXSEGPMASPTIDVNQIPGLLVAVHSKPPR-WLADRLRKACEGDRSGQVRWDTFVAALARVLSTASKDGSLLVRTAMPEWVLISRKAHPTIQHGKRITSCYQHDVG--GAAPAQRQLTFKRGMRGTTQDLFEGTTKDTFHVPGYGGFIPASKVNARAMQHGDMQDARAYSANLRLFHKHNMAGYTGHQGHAACNDRGELLCGTHPATTSGAAALGLLL 381
BLAST of mRNA_P-littoralis_Contig606.9.1 vs. uniprot
Match: A0A7R9UFG0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFG0_9STRA) HSP 1 Score: 164 bits (414), Expect = 1.800e-44 Identity = 111/314 (35.35%), Postives = 151/314 (48.09%), Query Frame = 1
Query: 1 MGRGVAYDSGLSVTPATMTTCTGEAFSNVSRGDYHIPDRRGVSAKNFSVKPQDRAKPFLHESVYEHDFRNFSQEVEGLDREGGGEREEMDGQNAFKREFKRLDAGNGVVHIRDMPRLIQGVLGRDVRPWIQDRVLKMFEANRDGKVSWLDLQDGLRKVVESIRADVSHREREMPEWLVANRKVKPAVTRGQVTDSCYQMDMGKDGEIPRDRRVWYKTGMSSTTLDLFGGTTKATYQVPGYGGFIPASRMNQRAREHGDMKDSRPQALDLRLFYRHNTPGYTGHAPSAACNDPGPAYCGSNALTTSGAAALGHIL 942
+G G+ Y + L P T T A + V Y PDRRGVSA F + K F+ +VY DF + ++ L ++ AF++ F G G + +P+++ LG I+ + F +R G VSW D + L +++E+ + S +PEWLV + K P V G SCYQ DMG E P+ + YK GM ST+ DL GTTK TY +PGY GFIP SR N A + K +R + + GYTGH PS ND GP CG N LTT+GA A +L
Sbjct: 34 VGTGLVYSAPLPTRPKWGETITKAATTLVRPRLYSAPDRRGVSAL-FEESNKALPKRFMGSTVYRSDFIDLRADLVKL-------QDACRSPAAFQKAFFHYSRG-GELDTMLLPKVLDMALGERASEGIKSKFAAAFSKSRAGFVSWDDFRQKLGQILEAAVKEGSSGGVSVPEWLVLSSKPIPKVIVGPALKSCYQCDMGLRNENPQTKPYTYKAGMYSTSYDLLRGTTKDTYHLPGYDGFIPESRRNSFAITQVNAKRTRASRERIAENVKPAVSGYTGHIPSNLINDRGPPLCGLNPLTTTGAGARHWML 338
BLAST of mRNA_P-littoralis_Contig606.9.1 vs. uniprot
Match: A0A7S2FHF5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FHF5_9STRA) HSP 1 Score: 130 bits (328), Expect = 1.250e-32 Identity = 66/139 (47.48%), Postives = 84/139 (60.43%), Query Frame = 1
Query: 517 MPEWLVANRKVKPAVTRGQVTDSCYQMDMGKDGEIPRDRRVWYKTGMSSTTLDLFGGTTKATYQVPGYGGFIPASRMNQRAREHGDMKDSRPQALDLRLFYRHNTPGYTGHAPSAACNDPGPAYCGSNALTTSGAAALG 933
+PEW+ A++ + V Q S YQ DMG E P DR KTGM+ TT DL GTTKATY +PG+ G IP ++ N R HGD + LRL++RHN PGYTG P+ A ND G + G+N T+SGA+ALG
Sbjct: 120 VPEWVTASKAITEDVVPRQPVRSSYQTDMGMANEKPLDRPYISKTGMAGTTQDLCAGTTKATYHIPGFSGHIPTTQRNPRVVAHGDGQKVHDMPSHLRLYHRHNMPGYTGFRPTNAKNDKGERHSGANPATSSGASALG 258
BLAST of mRNA_P-littoralis_Contig606.9.1 vs. uniprot
Match: A0A485KW59_9STRA (Aste57867_12656 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KW59_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.990e-29 Identity = 97/305 (31.80%), Postives = 142/305 (46.56%), Query Frame = 1
Query: 73 AFSNVSRGDYHIPDRRGVSAKNFSVKPQDRAKP---------FLHESVYEHDFRNFSQEVEGLDREGGGEREEMDGQNAFKREFKRL------DAGNGVVHIRDMPRLIQGVLGRDVRPWIQDRVLKMFEANRDGKVSWLDLQDGLRKVVESIRADVSHREREMPEWLVANRKVKPAVTRGQVTDSCYQMDMGKDGEIPRDRRVWYKT-GMSSTTLDLFGGTTKATYQVPGYGGFIPASRMNQRAREHGDMKDSRPQALDLRLFYRHNTPGYTGHAPSAACNDPGPAYCGSNALTTSGAAALGHI 939
AF V+RGD+ G+ AK + P +K FL +S+Y+ DF NF + G R A++ F L + G+ + D+ L++ V G+ + D MF+ DG VSW Q+ + ++ + + WL + V P T S +Q+D G G P R +T GM+STT DLF GTTKAT+ +P Y GFIP ++ N A GD + R +A DLRL++ +N PGYTGH P + N G A G++ TT+G H+
Sbjct: 53 AFEPVTRGDF------GLVAKQDYLHPTRSSKDAVEIAGSRTFLGQSLYQSDFLNFQDQ---------GRRIAEIPLEAYEAAFDDLAQGTNQEGGSKKIARDDVKHLLRKVYGKAPTSRVLDIYTHMFDTCPDGFVSWEIFQEAVLRLSSFLLHETVKTTPGQAGWLDFVQHVIPNGT----PSSSHQVDFGVYGSEPIGRPYVSRTHGMASTTSDLFDGTTKATFHIPRYQGFIPQTKFNPTAVVQGDAERGRTKAEDLRLYHLNNVPGYTGHKPVDSKNVRGEAKTGTDIRTTNGGVYKPHL 338
BLAST of mRNA_P-littoralis_Contig606.9.1 vs. uniprot
Match: A0A6G0XRS2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XRS2_9STRA) HSP 1 Score: 121 bits (304), Expect = 2.050e-28 Identity = 95/313 (30.35%), Postives = 143/313 (45.69%), Query Frame = 1
Query: 37 VTPATMTTCTGEAFSNVSRGDYHIPDRRGVSAKNFSVKPQDR---AKPFLHESVYEHDFRNFSQEVEGLDREGGGEREEMDGQNAFKREFKRL------DAGNGVVHIR--DMPRLIQGVLGRDVRPWIQDRVLKMFEANRDGKVSWLDLQDGLRKVVESIRADVSHREREMPEWLVANRKVKPAVTRGQVTDSCYQMDMGKDGEIPRDRRVWYKT-GMSSTTLDLFGGTTKATYQVPGYGGFIPASRMNQRAREHGDMKDSRPQALDLRLFYRHNTPGYTGHAPSAACNDPGPAYCGSNALTTSGAAALGHI 939
V+P T +F ++R Y + S + K ++ FL +S+Y+ DF NF +E G+R AF+ F L ++ + V I D+ L+Q V G+ I + MF+ DG V+W Q+ ++ + W+ +KV P T S +Q+D G G P R ++ GM+STT DLF G+TKA+Y +P Y GFIP ++ N A G+ + RP+A DLRL++ +N PGYTGH P + N G A G + TT+G H
Sbjct: 40 VSPPTSIRVVNPSFEALTRNHYGQVTPQDFSNPVRAAKDNGEIAHSRTFLGQSLYQRDFANFHEE---------GKRIAELSMEAFQAAFDSLAEEPNQESPDAVKKINRDDVGELLQAVYGKPPATRILEIYAHMFDVCPDGFVTWEVFQEATLRLSSFLLHQTIKPSSHSIGWVDFVKKVLPNGT----PSSSHQIDYGTYGSDPLARPYMNRSHGMASTTSDLFDGSTKASYHIPRYQGFIPHTKCNPTAVSQGECEKPRPKAEDLRLYHSNNIPGYTGHKPVDSKNVRGEAKTGCDVRTTNGLVYKPHF 339
BLAST of mRNA_P-littoralis_Contig606.9.1 vs. uniprot
Match: A0A1V9ZS18_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZS18_9STRA) HSP 1 Score: 118 bits (295), Expect = 3.580e-27 Identity = 92/296 (31.08%), Postives = 145/296 (48.99%), Query Frame = 1
Query: 76 FSNVSRGDYHIPDRRGVSAKNFSVKPQD--RAKPFLHESVYEHDFRNFSQEVEGLDREGGGEREEMDGQNAFKREFKRL-DAGNGVVHI-RDMPR-LIQGVLGRDVRPWIQDRVLKMFEANRDGKVSWLDLQDGLRKVVESIRADVSHREREMPEWL--VANRKVKPAVTRGQVTDSCYQMDMGKDGEIPRDRRVWYKT-GMSSTTLDLFGGTTKATYQVPGYGGFIPASRMNQRAREHGDMKDSRPQALDLRLFYRHNTPGYTGHAPSAACNDPGPAYCGSNALTTSGAAALGHI 939
F +V R D+ + + ++ D K FL +S+YE DF +F + + L EM + +KR F L +AG + RD+ + L+ V G + D MF+ DG ++W ++ L ++ + ++ + + P W+ ++ R++ P G + S +Q+D G G P R +T GM+STT DL GTTK T+ +P YGGF+P + N A GD R + DLRL++ +N PGYTGH P + N G A G++ TT+G HI
Sbjct: 52 FGSVYRADFGLVTKADYVSRGPKESHNDVVAGKKFLGQSLYETDFVHFQNQGKAL--------LEMP-REEYKRAFDALAEAGGQEPRLSRDLVKELLTAVYGTPPSARMLDIYAHMFDPIADGYITWPVFEEALERLTLFV-SNATSKLHGKPSWMEYLSLRRLLP----GTMPSSSHQIDYGTYGSDPLARPYLGRTKGMASTTSDLADGTTKNTFHIPRYGGFMPEAPHNPTAVAQGDCPQPRSKGADLRLYHLNNIPGYTGHKPVDSKNVRGEAATGTDQRTTNGYVYRPHI 333
BLAST of mRNA_P-littoralis_Contig606.9.1 vs. uniprot
Match: A0A6A5B0E1_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5B0E1_9STRA) HSP 1 Score: 116 bits (290), Expect = 2.750e-26 Identity = 95/327 (29.05%), Postives = 154/327 (47.09%), Query Frame = 1
Query: 16 AYDSGLSVTPATMTTCTGEAFSNVSRGDYHIPDRRGVSAKNFSVKPQDRAKPFLHESVYEHDFRNFSQE------------VEGLDREGGGEREEMDGQNAFKREFKRLDAGNGVVHIRDMPRLIQGVLGRDVRPWIQDRVLKMFEANRDGKVSWLDLQDGLRKVVESIRADVSHREREMPE---WL--VANRKVKPAVTRGQVTDSCYQMDMGKDGEIPRDRRVWYKT-GMSSTTLDLFGGTTKATYQVPGYGGFIPASRMNQRAREHGDMKDSRPQALDLRLFYRHNTPGYTGHAPSAACNDPGPAYCGSNALTTSGAAALGHIL 942
A ++ + + + T F +V++ DY P R + + ++ FL +++Y++DF NF E D+ ++ ++ + KRL A + V L++ V G+ I + MF+A DG +SW D ++ V + + + H+ ++ W VA +++ P G S +Q+D G G P R +T GM+STT DLF GTTKAT+ +P Y GFIP ++ N A GD + +R DLRL++ +N PGYTGH P + N G A G+++ TT+G H L
Sbjct: 44 ATNTAIRIVNPSFEAVTRSHFGHVTKHDYENPARPASRGREIA-----NSRTFLGQTLYQNDFLNFQDEGRRIAALPAAVYAASFDQLATVPNQDPTPSDSDLFKLKRL-ARDDVXXXXXXXTLLRQVYGKPPTSRILEIYAHMFDACPDGFISW----DVFQEAVARLASFLLHQTIKISGQAGWFDFVAAKQMLP----GGTPASSHQLDFGTYGSEPLVRPYIGRTNGMASTTTDLFDGTTKATFHIPRYQGFIPQTKYNPTAVAQGDGEQTRGTEEDLRLYHLNNLPGYTGHKPVDSKNVRGEAKSGTDSRTTNGFVYKPHNL 356
BLAST of mRNA_P-littoralis_Contig606.9.1 vs. uniprot
Match: A0A024U6R1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U6R1_9STRA) HSP 1 Score: 114 bits (285), Expect = 1.220e-25 Identity = 95/326 (29.14%), Postives = 148/326 (45.40%), Query Frame = 1
Query: 16 AYDSGLSVTPATMTTCTGEAFSNVSRGDYHIPDR---RGVSAKNFSVKPQDRAKPFLHESVYEHDFRNFSQEVEGLDREGGGEREEMDGQNAFKREFKRL------------DAGNGVVHIRDMPRLIQGVLGRDVRPWIQDRVLKMFEANRDGKVSWLDLQDGLRKVVESIRADVSHREREMPEWL--VANRKVKPAVTRGQVTDSCYQMDMGKDGEIPRDRRVWYKT-GMSSTTLDLFGGTTKATYQVPGYGGFIPASRMNQRAREHGDMKDSRPQALDLRLFYRHNTPGYTGHAPSAACNDPGPAYCGSNALTTSGAAALGHI 939
A ++ + + + T + V++ D+ P R RG N ++ FL +++Y+HDF NF +E G R A+ F L D + D+ ++ V G+ I D MF+A DG +SW Q+ + ++ S+ + + WL VA + V G S +Q+D G G P R +T GM+STT D+F GT+KAT+ +P Y GFIP ++ N A GD + R ++ DLRL++ +N PGYTGH P + N G A G++ TT+G H+
Sbjct: 44 ATNTAIRIVNPSFEAVTRGHYGQVTKHDFETPTRPVSRGAEIAN--------SRTFLGQTLYQHDFLNFHEE---------GRRIAALPMAAYAAAFDELTHVPNQDSTSDADPKQKKIARDDVKAVLCAVYGKPPTARILDIYAHMFDACPDGFISWEIFQEAVCRL-SSLLLHQTVKVSGQAGWLEFVAAKHV----LHGGTPASSHQIDFGTYGGNPLARPYVGRTNGMASTTADMFDGTSKATFHIPRYQGFIPHTKYNPTAVAQGDCEHVRGKSEDLRLYHLNNLPGYTGHKPVDSKNVRGEAKTGTDGRTTNGFVFKPHM 347
BLAST of mRNA_P-littoralis_Contig606.9.1 vs. uniprot
Match: W4FY68_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FY68_9STRA) HSP 1 Score: 116 bits (290), Expect = 3.260e-25 Identity = 94/327 (28.75%), Postives = 154/327 (47.09%), Query Frame = 1
Query: 16 AYDSGLSVTPATMTTCTGEAFSNVSRGDYHIPDRRGVSAKNFSVKPQDRAKPFLHESVYEHDFRNFSQE------------VEGLDREGGGEREEMDGQNAFKREFKRLDAGNGVVHIRDMPRLIQGVLGRDVRPWIQDRVLKMFEANRDGKVSWLDLQDGLRKVVESIRADVSHREREMPE---WL--VANRKVKPAVTRGQVTDSCYQMDMGKDGEIPRDRRVWYKT-GMSSTTLDLFGGTTKATYQVPGYGGFIPASRMNQRAREHGDMKDSRPQALDLRLFYRHNTPGYTGHAPSAACNDPGPAYCGSNALTTSGAAALGHIL 942
A ++ + + + T F +V++ DY P R + + ++ FL +++Y++DF NF E D+ ++ ++ + KRL D+ L++ V G+ I + MF+A DG +SW D ++ V + + + H+ ++ W VA +++ P G S +Q+D G G P R +T GM+STT DLF GTTKAT+ +P Y GFIP ++ N A GD + +R + DLRL++ +N PGYTGH P + N G A G+++ TT+G H L
Sbjct: 44 ATNTAIRIVNPSFEAVTRSHFGHVTKHDYENPARPASRGREIA-----NSRTFLGQTLYQNDFLNFQDEGRRIAALPAAVYAASFDQLATVPNQDPTPSDSDLFKLKRLARD-------DVKTLLRQVYGKPPTSRILEIYAHMFDACPDGFISW----DVFQEAVARLASFLLHQTIKISGQAGWFDFVAAKQMLP----GGTPASSHQLDFGTYGSEPLARPYIGRTNGMASTTTDLFDGTTKATFHIPRYQGFIPQTKYNPTAVAQGDGEQTRGKEEDLRLYHLNNLPGYTGHKPVDSKNVRGEAKTGTDSRTTNGFVYKPHNL 350 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig606.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig606.9.1 >prot_P-littoralis_Contig606.9.1 ID=prot_P-littoralis_Contig606.9.1|Name=mRNA_P-littoralis_Contig606.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=315bp MGRGVAYDSGLSVTPATMTTCTGEAFSNVSRGDYHIPDRRGVSAKNFSVKback to top mRNA from alignment at P-littoralis_Contig606:46270..51192+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig606.9.1 ID=mRNA_P-littoralis_Contig606.9.1|Name=mRNA_P-littoralis_Contig606.9.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4923bp|location=Sequence derived from alignment at P-littoralis_Contig606:46270..51192+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig606:46270..51192+ >mRNA_P-littoralis_Contig606.9.1 ID=mRNA_P-littoralis_Contig606.9.1|Name=mRNA_P-littoralis_Contig606.9.1|organism=Pylaiella littoralis U1_48|type=CDS|length=945bp|location=Sequence derived from alignment at P-littoralis_Contig606:46270..51192+ (Pylaiella littoralis U1_48)back to top |