mRNA_P-littoralis_Contig605.11.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig605.11.1
Unique NamemRNA_P-littoralis_Contig605.11.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig605.11.1 vs. uniprot
Match: D7FUQ7_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUQ7_ECTSI)

HSP 1 Score: 605 bits (1559), Expect = 1.390e-196
Identity = 492/877 (56.10%), Postives = 540/877 (61.57%), Query Frame = 1 
Query:  445 MENLYEVLQTLGRGSFGVVRKVRRREDGKTLVVKEMDYGAADEKQKEQIVAEVNILRELRHPFIVRYYDRIVDRRRTRLHIVMEHCSTDLARVIKTRRLRGEYLEETFLWNLMCQVVVALEVCHGRVGKGGARRPIIHRDLKPENVFLTSENVVKLGDFGLAKELSGAQLAETSVGTPYYMSPELINEQRYDERTDVWSLGCLMYEASALTRPFNAHNQLALAMKINTGKVAPIPSRYSPGLFATIEWMLNKTRHKRPRMEDLIKVPGLQLPLRENRLLVQEFQLQQSYVRRLRTLKSRENEIERREAELAVQEARLLRRSEQSLAD-----PTRSPREQCGWGKRLGSGGXXXXXXXXXRCSPTSSFSERAATAVAVGAAGEREWRRQSPRPLAPTTRVSRLRQHEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPACVPLPGGRKSLSSAIXXXXXXXXXXXXAGEAEERGVGLAMIEGDASGVRMPPPPPRRTWEGRGGQGEDGQEDVTLVHQRRPVGDADPARRGGGV--GSGGVGDRERTAVGSGPEDCRASAPTSDKSEL-AQDVTRATAAVLDYASFVLHSSPRRHESPVRRSRSSSSDSGGSDGRGMIEGKGGKHRHPVFRGGSVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPGVSPLRSSSCLDDTVPMDSHDPAIVPVRPAPRTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDKVGRRRARGGWKD-GAESHSIKTEAVMAAGRRARESYAGFMETIAAARNLGTRVAPVRPPHENEENLHGAADTATAFRGTTTPHPCP---------------SPNTPLVELPNGRG-GREHRNS 3000
            ME  ++VLQTLGRGSFGVVRKVRR+ DGKTLVVKEMDYGAADEKQKEQIVAEVNILRELRHPFIVRYYDRIVDRRRTRLHIVMEHCSTDLARVIKTRRLRGEYL+E+FLWNLMCQVVVALE CHGR+GK G+RRPIIHRDLKP+NVFLTS+NVVKLGDFGLAKELSGAQLAETSVGTPYYMSPELINEQRYDERTDVWSLGCLMYEA+ALTRPF+AHNQLALAMKINT KVAPIPSRYSP LFATIEWML+KTRHKRPRMEDL KVPGLQLPLRENRLLVQEFQL+QSY+RRLRTLKSRE +IERREAELA  EA+L  RSE++LA       +R  +EQ G  + +  GG          C P  S    +  A  VGAA   E                                                                        R++++                    ERG         A+G +   P  RR  E RG  GED    VT++ +R                 GSGG     R    + PE C AS  + DKS+L   +   AT AVLDYAS VLH    RH SP+   RSSS  +    G  ++  +  +      R     GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            LD+TVPM SH+             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           GGW D G E  S +TEAVMAAGR+ARESYAGFMETIAAAR+LGT  APV                                             S NTPL ELPNGR  G  H +S
Sbjct:    1 MEQQFDVLQTLGRGSFGVVRKVRRKADGKTLVVKEMDYGAADEKQKEQIVAEVNILRELRHPFIVRYYDRIVDRRRTRLHIVMEHCSTDLARVIKTRRLRGEYLDESFLWNLMCQVVVALEFCHGRMGKEGSRRPIIHRDLKPDNVFLTSDNVVKLGDFGLAKELSGAQLAETSVGTPYYMSPELINEQRYDERTDVWSLGCLMYEAAALTRPFDAHNQLALAMKINTSKVAPIPSRYSPDLFATIEWMLSKTRHKRPRMEDLAKVPGLQLPLRENRLLVQEFQLEQSYLRRLRTLKSREVDIERREAELATGEAKLRYRSERALAALNSQRESRKEQEQEGDKRTVAGGGGHPGCCF---CFPRGS----SLPAAGVGAANGHE-----------------------------------------------------------------------AREAVA--------------------ERGA--------AAGEQRKTP--RRERECRGVAGED----VTMLLRRXXXXXXXXXXXXXXXAPGSGGSDSSRRGEEIAKPE-CYASPTSGDKSDLRTPNAADATTAVLDYASLVLHRETSRHVSPIAH-RSSSGSTDADSGERVVAREQAESAVSRERASECGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------XXXLDETVPMGSHE-GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGWDDNGGELRSTRTEAVMAAGRKARESYAGFMETIAAARDLGTWAAPVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEYSQNTPLAELPNGRAAGAPHISS 754
[Close]
BLAST of mRNA_P-littoralis_Contig605.11.1 vs. uniprot
Match: A0A067D907_SAPPC (NEK protein kinase n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067D907_SAPPC)

HSP 1 Score: 325 bits (832), Expect = 5.400e-96
Identity = 164/315 (52.06%), Postives = 233/315 (73.97%), Query Frame = 1 
Query:  457 YEVLQTLGRGSFGVVRKVRRREDGKTLVVKEMDYGAADEKQKEQIVAEVNILRELRHPFIVRYYDRIVDRRRTRLHIVMEHCST-DLARVIKTRRLRGEYLEETFLWNLMCQVVVALEVCHGRVGKGGARRPIIHRDLKPENVFLTSENVVKLGDFGLAKELSG-AQLAETSVGTPYYMSPELINEQRYDERTDVWSLGCLMYEASALTRPFNAHNQLALAMKINTGKVAPIPSRYSPGLFATIEWMLNKTRHKRPRMEDLIKVPGLQLPLRENRLLVQEFQLQQSYVRRLRTLKSRENEIERREAELAVQEARL 1395
            Y+ ++ +G+GSFGVV K+RR+ DGK LV KE+ YG   EK+K+ IV+EVNILRELRHP IVRY DR++D++ +++ IVME+C   DL+++IK +R  G  +EE F+W +  Q+ +AL+ CH R  +G   RPI+HRD+KP N+FL ++N  KLGDFGLAKELS  ++ A+T+VGTPYYMSPE++NE  YDER+D+W+LGCL+YE +AL  PF+A NQLALA KIN GK A IP  YS  LF  I+WML++ R +RPR+EDL ++P L   L+   + + E  L ++Y  +++ L + E E+ R+EA L V+E+++
Sbjct:    4 YDHIRVIGKGSFGVVSKIRRQTDGKELVWKEVGYGQMTEKEKQLIVSEVNILRELRHPHIVRYLDRVIDKQSSKIFIVMEYCEGGDLSQLIKRKRREGSTIEEAFIWQVFTQLYMALKECH-RHREGNTVRPILHRDIKPGNIFLDAQNNAKLGDFGLAKELSSESKFAQTNVGTPYYMSPEMVNEMTYDERSDIWALGCLLYEMAALAPPFDATNQLALAKKINAGKFARIPEAYSEDLFQAIKWMLHRQRSRRPRIEDLERIPQLARRLQTYSMTLAEASLHETYTAKMKELIAIEEELRRQEAVLLVRESQV 317
[Close]
BLAST of mRNA_P-littoralis_Contig605.11.1 vs. uniprot
Match: A0A2D4CC50_PYTIN (Protein kinase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CC50_PYTIN)

HSP 1 Score: 324 bits (830), Expect = 1.030e-95
Identity = 164/315 (52.06%), Postives = 234/315 (74.29%), Query Frame = 1 
Query:  457 YEVLQTLGRGSFGVVRKVRRREDGKTLVVKEMDYGAADEKQKEQIVAEVNILRELRHPFIVRYYDRIVDRRRTRLHIVMEHCST-DLARVIKTRRLRGEYLEETFLWNLMCQVVVALEVCHGRVGKGGARRPIIHRDLKPENVFLTSENVVKLGDFGLAKELSG-AQLAETSVGTPYYMSPELINEQRYDERTDVWSLGCLMYEASALTRPFNAHNQLALAMKINTGKVAPIPSRYSPGLFATIEWMLNKTRHKRPRMEDLIKVPGLQLPLRENRL---LVQEFQLQQSYVRRLRTLKSRENEIERREAELAVQE 1386
            YE ++ +G+GSFGVV ++ R+ D K LV KE++YGA  EK+K+ IV+EVNILRELRHP IVRY DR++D++ T+++IVME+C   DL++ IK ++  G+Y++E F+W++   + +AL+ CH R  +G   RPI+HRD+KP N+FL + N  KLGDFGLAKELS  ++ A+T+VGTPYYMSPE++NE  YDER+D+W+LGCL+YE + L  PF+A NQLALA KIN GK A IPS+YS GLF  I WML++ R +RPR+EDL +VP LQ  LR       +  E Q++ +Y ++++ L + E+++ R+EA L  +E
Sbjct:    4 YETVRVIGKGSFGVVTQILRKSDKKALVWKEVNYGAMSEKEKQLIVSEVNILRELRHPHIVRYLDRVIDKQATKIYIVMEYCEGGDLSQYIKRKKREGQYIDENFIWHIFTHIFLALKECH-RHREGNVIRPILHRDIKPGNIFLDANNNAKLGDFGLAKELSSESRFAQTNVGTPYYMSPEMVNEMTYDERSDIWALGCLLYEMATLAPPFDATNQLALAKKINAGKFARIPSQYSEGLFQVIRWMLHRQRSRRPRIEDLERVPQLQQRLRAYAAANNVAPEQQIRTAYDQKMKELLAIEDDLRRQEAGLIARE 317
[Close]
BLAST of mRNA_P-littoralis_Contig605.11.1 vs. uniprot
Match: A0A024GEG4_9STRA (Protein kinase domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GEG4_9STRA)

HSP 1 Score: 319 bits (818), Expect = 9.910e-95
Identity = 171/343 (49.85%), Postives = 240/343 (69.97%), Query Frame = 1 
Query:  457 YEVLQTLGRGSFGVVRKVRRREDGKTLVVKEMDYGAADEKQKEQIVAEVNILRELRHPFIVRYYDRIVDRRRTRLHIVMEHCST-DLARVIKTRRLRGEYLEETFLWNLMCQVVVALEVCHGRVGKGGARRPIIHRDLKPENVFLTSENVVKLGDFGLAKEL-SGAQLAETSVGTPYYMSPELINEQRYDERTDVWSLGCLMYEASALTRPFNAHNQLALAMKINTGKVAPIPSRYSPGLFATIEWMLNKTRHKRPRMEDLIKVPGLQLPLRE----NRLLVQEF--------------QLQQSYVRRLRTLKSRENEIERREAELAVQEARLLRRSEQSLAD 1425
            YE ++ +G+GSFGVV ++ R+ DGK LV KE++YG   EK+K+ IV+EVNILRELRHP IVRY DR++D++ T+++IVME+C   DL++ +K ++  G Y+EE F+W++   + +AL  CH R  +G   RPI+HRD+KP N+FL +    KLGDFGLAKEL S ++ A+T+VGTPYYMSPE++NE  YDER+D+W+LGCL+YE + L+ PF+A NQLALA KIN G+ A IPS+YS GLF  I WML++ R +RPR+EDL ++P LQ  LR     N  L Q                QLQ +Y ++++ L S E ++ R+E+ LA +E +L    E+S AD
Sbjct:    4 YEQVRVIGKGSFGVVTQIVRKSDGKALVWKEVNYGPMSEKEKQLIVSEVNILRELRHPHIVRYLDRVIDKQATKIYIVMEYCEGGDLSQFVKRKKREGSYIEEGFIWHVFTHIYLALRECH-RHREGNVVRPILHRDIKPGNIFLDNNGNAKLGDFGLAKELTSESRFAQTNVGTPYYMSPEMVNEMTYDERSDIWALGCLLYEMATLSPPFDATNQLALAKKINAGRFARIPSQYSEGLFQAIRWMLHRQRSRRPRVEDLERIPQLQQRLRAYAATNPALFQNSSSSTSSSAYSPDIQQLQATYNQKMKELLSIEEDLRRQESALAAREKKL----EESEAD 341
[Close]
BLAST of mRNA_P-littoralis_Contig605.11.1 vs. uniprot
Match: A0A024TV75_9STRA (NEK protein kinase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TV75_9STRA)

HSP 1 Score: 320 bits (820), Expect = 4.140e-94
Identity = 163/315 (51.75%), Postives = 230/315 (73.02%), Query Frame = 1 
Query:  457 YEVLQTLGRGSFGVVRKVRRREDGKTLVVKEMDYGAADEKQKEQIVAEVNILRELRHPFIVRYYDRIVDRRRTRLHIVMEHCST-DLARVIKTRRLRGEYLEETFLWNLMCQVVVALEVCHGRVGKGGARRPIIHRDLKPENVFLTSENVVKLGDFGLAKELSG-AQLAETSVGTPYYMSPELINEQRYDERTDVWSLGCLMYEASALTRPFNAHNQLALAMKINTGKVAPIPSRYSPGLFATIEWMLNKTRHKRPRMEDLIKVPGLQLPLRENRLLVQEFQLQQSYVRRLRTLKSRENEIERREAELAVQEARL 1395
            YE ++ +G+GSFG+V K+ R+ D K LV KE+DYG  DEKQK+ IV+EVNILREL+HP +VRY DR++D++ T++ IVME+C   DL+R+IK  R  G +++E F+W ++  + +AL+ CH R  +    +PI+HRD+KP NVFL +E   KLGDFGLAKELS  ++ A T+VGTPYYMSPE++N+  YDER+D+W+LGCL+YE +AL  PF+A NQLALA KIN GK + IP  YS  LF  I WML++ R +RPR+EDL +VP L   LRE  +   E QLQ +Y  +++ L S + +++++EA L V+E ++
Sbjct:    4 YEHVRVIGKGSFGIVSKIVRKADNKELVWKEVDYGHMDEKQKQLIVSEVNILRELKHPHVVRYLDRVIDKQSTKIFIVMEYCEGGDLSRLIKRHRRDGTFVDEAFIWKVLTHMYLALKECH-RHKESNLVKPILHRDIKPGNVFLDAEGNAKLGDFGLAKELSSESKFAHTNVGTPYYMSPEMVNDMTYDERSDIWALGCLIYELAALVPPFDATNQLALAKKINAGKFSRIPDMYSEDLFQAIRWMLHRQRSRRPRIEDLERVPLLARRLREYNMSSVEVQLQNTYAAKMKELFSIQEDLQKQEALLLVRETQI 317
[Close]
BLAST of mRNA_P-littoralis_Contig605.11.1 vs. uniprot
Match: A0A421GZU3_9STRA (Protein kinase domain-containing protein n=8 Tax=Oomycota TaxID=4762 RepID=A0A421GZU3_9STRA)

HSP 1 Score: 317 bits (811), Expect = 1.530e-93
Identity = 166/320 (51.88%), Postives = 228/320 (71.25%), Query Frame = 1 
Query:  457 YEVLQTLGRGSFGVVRKVRRREDGKTLVVKEMDYGAADEKQKEQIVAEVNILRELRHPFIVRYYDRIVDRRRTRLHIVMEHCST-DLARVIKTRRLRGEYLEETFLWNLMCQVVVALEVCHGRVGKGGARRPIIHRDLKPENVFLTSENVVKLGDFGLAKELSG-AQLAETSVGTPYYMSPELINEQRYDERTDVWSLGCLMYEASALTRPFNAHNQLALAMKINTGKVAPIPSRYSPGLFATIEWMLNKTRHKRPRMEDLIKVPGLQLPLRENRLLVQ--------EFQLQQSYVRRLRTLKSRENEIERREAELAVQE 1386
            YE ++ +G+GSFGVV ++ R+ D K LV KE++YGA  EK+K+ IV+EVNILRELRHP IVRY DR++D++ T+++IVME+C   DL + IK ++  G Y+EE F+W++   + +AL+ CH R  +G A RPI+HRD+KP N+FL S N  KLGDFGLAKELS  ++ A+T+VGTPYYMSPE++NE  YD+R+D+W+LGCL+YE + L  PF+A NQLALA KIN GK   IPS+YS GLF  I WML++ R +RPR+EDL +VP LQ  LR               +  LQ SY ++++ L   E ++ R+EA L  +E
Sbjct:    4 YEQVRIIGKGSFGVVTQIVRKTDRKMLVWKEVNYGAMSEKEKQLIVSEVNILRELRHPHIVRYLDRVIDKQATKIYIVMEYCEGGDLGQFIKRKKREGSYIEEGFIWHIFTHIFLALKECH-RHREGNAIRPILHRDIKPGNIFLDSNNNAKLGDFGLAKELSSESRFAQTNVGTPYYMSPEMVNEMTYDDRSDIWALGCLLYEMATLGPPFDATNQLALAKKINAGKFTRIPSQYSEGLFQVIRWMLHRQRSRRPRIEDLERVPQLQQRLRAYAAAHNSQPPPAGGDQNLQTSYNQKMKELLGIEEDLRRQEAALMARE 322
[Close]
BLAST of mRNA_P-littoralis_Contig605.11.1 vs. uniprot
Match: A0A8K1C5Y5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5Y5_PYTOL)

HSP 1 Score: 320 bits (819), Expect = 1.930e-93
Identity = 163/318 (51.26%), Postives = 232/318 (72.96%), Query Frame = 1 
Query:  457 YEVLQTLGRGSFGVVRKVRRREDGKTLVVKEMDYGAADEKQKEQIVAEVNILRELRHPFIVRYYDRIVDRRRTRLHIVMEHCST-DLARVIKTRRLRGEYLEETFLWNLMCQVVVALEVCHGRVGKGGARRPIIHRDLKPENVFLTSENVVKLGDFGLAKELSG-AQLAETSVGTPYYMSPELINEQRYDERTDVWSLGCLMYEASALTRPFNAHNQLALAMKINTGKVAPIPSRYSPGLFATIEWMLNKTRHKRPRMEDLIKVPGLQLPLRENRLLVQ---EFQLQQSYVRRLRTLKSRENEIERREAELAVQEARL 1395
            YE ++ +G+GSFGVV ++ R+ DGK LV KE++YGA  EK+K+ IV+EVNILRELRHP IVRY DR++D++ T+++IVME C   DL++ IK ++  G Y++E F+W++   V +AL+ CH R  +G   RPI+HRD+KP N+FL + N  KLGDFGLAKELS  ++ A+T+VGTPYYMSPE++NE  YD+R+D+W+LGCL+YE + L  PF+A NQLALA KIN GK + IP++YS  LF  I WML++ R +RPR+EDL +VP LQ  LR          E Q++ +Y ++++ L + E ++ R+EA L  +E +L
Sbjct:    4 YETVRVIGKGSFGVVTQIVRKSDGKALVWKEVNYGAMSEKEKQLIVSEVNILRELRHPHIVRYLDRVIDKQATKIYIVMEFCEGGDLSQYIKRKKREGSYIDENFIWHIFTHVFLALKECH-RHREGNVIRPILHRDIKPGNIFLDANNNAKLGDFGLAKELSSESRFAQTNVGTPYYMSPEMVNEMTYDDRSDIWALGCLLYEMATLAPPFDATNQLALAKKINAGKFSRIPAQYSEALFQVIRWMLHRQRSRRPRIEDLERVPQLQQRLRAYAAANSPPPEQQVRSTYDQKMKELLAIEEDLRRQEAALLAREKKL 320
[Close]
BLAST of mRNA_P-littoralis_Contig605.11.1 vs. uniprot
Match: F0WWJ3_9STRA (Protein kinase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WWJ3_9STRA)

HSP 1 Score: 319 bits (818), Expect = 3.360e-93
Identity = 171/343 (49.85%), Postives = 240/343 (69.97%), Query Frame = 1 
Query:  457 YEVLQTLGRGSFGVVRKVRRREDGKTLVVKEMDYGAADEKQKEQIVAEVNILRELRHPFIVRYYDRIVDRRRTRLHIVMEHCST-DLARVIKTRRLRGEYLEETFLWNLMCQVVVALEVCHGRVGKGGARRPIIHRDLKPENVFLTSENVVKLGDFGLAKEL-SGAQLAETSVGTPYYMSPELINEQRYDERTDVWSLGCLMYEASALTRPFNAHNQLALAMKINTGKVAPIPSRYSPGLFATIEWMLNKTRHKRPRMEDLIKVPGLQLPLRE----NRLLVQEF--------------QLQQSYVRRLRTLKSRENEIERREAELAVQEARLLRRSEQSLAD 1425
            YE ++ +G+GSFGVV ++ R+ DGK LV KE++YG   EK+K+ IV+EVNILRELRHP IVRY DR++D++ T+++IVME+C   DL++ +K ++  G Y+EE F+W++   + +AL  CH R  +G   RPI+HRD+KP N+FL +    KLGDFGLAKEL S ++ A+T+VGTPYYMSPE++NE  YDER+D+W+LGCL+YE + L+ PF+A NQLALA KIN G+ A IPS+YS GLF  I WML++ R +RPR+EDL ++P LQ  LR     N  L Q                QLQ +Y ++++ L S E ++ R+E+ LA +E +L    E+S AD
Sbjct:    4 YEQVRVIGKGSFGVVTQIVRKSDGKALVWKEVNYGPMSEKEKQLIVSEVNILRELRHPHIVRYLDRVIDKQATKIYIVMEYCEGGDLSQFVKRKKREGSYIEEGFIWHVFTHIYLALRECH-RHREGNVVRPILHRDIKPGNIFLDNNGNAKLGDFGLAKELTSESRFAQTNVGTPYYMSPEMVNEMTYDERSDIWALGCLLYEMATLSPPFDATNQLALAKKINAGRFARIPSQYSEGLFQAIRWMLHRQRSRRPRVEDLERIPQLQQRLRAYAATNPALFQNSSSSNSSTAYSPDIQQLQATYNQKMKELLSIEEDLRRQESALAAREKKL----EESEAD 341
[Close]
BLAST of mRNA_P-littoralis_Contig605.11.1 vs. uniprot
Match: A0A484E015_BRELC (Protein kinase domain-containing protein n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A484E015_BRELC)

HSP 1 Score: 317 bits (812), Expect = 3.370e-93
Identity = 166/317 (52.37%), Postives = 227/317 (71.61%), Query Frame = 1 
Query:  457 YEVLQTLGRGSFGVVRKVRRREDGKTLVVKEMDYGAADEKQKEQIVAEVNILRELRHPFIVRYYDRIVDRRRTRLHIVMEHCST-DLARVIKTRRLRGEYLEETFLWNLMCQVVVALEVCHGRVGKGGARRPIIHRDLKPENVFLTSENVVKLGDFGLAKELSG-AQLAETSVGTPYYMSPELINEQRYDERTDVWSLGCLMYEASALTRPFNAHNQLALAMKINTGKVAPIPSRYSPGLFATIEWMLNKTRHKRPRMEDLIKVPGLQLPLRENRLLV-----QEFQLQQSYVRRLRTLKSRENEIERREAELAVQE 1386
            YE ++ +G+GSFGVV ++ R+ D K LV KE++YGA  EK+K+ IV+EVNILRELRHP IVRY DR++D++ TR++IVME+C   DL + IK ++  G Y+EE F+W++   + +AL+ CH R  +G   RPI+HRD+KP N+FL S N  KLGDFGLAKELS  ++ A+T+VGTPYYMSPE++NE  YD+R+D+W+LGCL+YE + L  PF+A NQLALA KIN GK   IPS+YS GLF  I WML++ R +RPR+EDL +VP LQ  LR            +  LQ SY ++++ L   E ++ R+EA L  +E
Sbjct:    4 YEQVRIIGKGSFGVVTQIVRKSDRKMLVWKEVNYGAMSEKEKQLIVSEVNILRELRHPHIVRYLDRVIDKQATRIYIVMEYCEGGDLGQFIKRKKREGSYIEEGFIWHIFTHIFLALKECH-RHREGNVIRPILHRDIKPGNIFLDSNNNAKLGDFGLAKELSSESRFAQTNVGTPYYMSPEMVNEMTYDDRSDIWALGCLLYEMATLGPPFDATNQLALAKKINAGKFNRIPSQYSEGLFQVIRWMLHRQRSRRPRIEDLERVPQLQQRLRAYTAANVPQPGSDQNLQTSYNQKMKELLGIEEDLRRQEAALMARE 319
[Close]
BLAST of mRNA_P-littoralis_Contig605.11.1 vs. uniprot
Match: M4BTA2_HYAAE (Protein kinase domain-containing protein n=12 Tax=Peronosporaceae TaxID=4777 RepID=M4BTA2_HYAAE)

HSP 1 Score: 317 bits (811), Expect = 9.890e-93
Identity = 165/313 (52.72%), Postives = 225/313 (71.88%), Query Frame = 1 
Query:  457 YEVLQTLGRGSFGVVRKVRRREDGKTLVVKEMDYGAADEKQKEQIVAEVNILRELRHPFIVRYYDRIVDRRRTRLHIVMEHCST-DLARVIKTRRLRGEYLEETFLWNLMCQVVVALEVCHGRVGKGGARRPIIHRDLKPENVFLTSENVVKLGDFGLAKELSG-AQLAETSVGTPYYMSPELINEQRYDERTDVWSLGCLMYEASALTRPFNAHNQLALAMKINTGKVAPIPSRYSPGLFATIEWMLNKTRHKRPRMEDLIKVPGLQLPLRENRLL-----VQEFQLQQSYVRRLRTLKSRENEIERREAEL 1374
            YE ++ +G+GSFGVV ++ R+ D K LV KE++YGA  EK+K+ IV+EVNILRELRHP IVRY DR++D++ TR++IVME+C   DL + IK ++  G Y+EE F+W++   + +AL+ CH R  +G   RPI+HRD+KP N+FL S N  KLGDFGLAKELS  ++ A+T+VGTPYYMSPE++NE  YD+R+D+W+LGCL+YE + L  PF+A NQLALA KIN GK   IPS+YS GLF  I WML++ R +RPR+EDL +VP LQ  LR            +  LQ SY ++++ L   E ++ R+EA L
Sbjct:    4 YEQIRIIGKGSFGVVTQIVRKADRKMLVWKEVNYGAMSEKEKQLIVSEVNILRELRHPHIVRYLDRVIDKQATRIYIVMEYCEGGDLGQFIKRKKREGSYIEEGFIWHIFTHIFLALKECH-RHREGNVIRPILHRDIKPGNIFLDSNNNAKLGDFGLAKELSSESRFAQTNVGTPYYMSPEMVNEMTYDDRSDIWALGCLLYEMATLGPPFDATNQLALAKKINAGKFTRIPSQYSEGLFQVIRWMLHRQRSRRPRIEDLERVPQLQQRLRAYSAANAPPAAADPNLQTSYNQKMKELLGIEEDLRRQEAAL 315
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig605.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUQ7_ECTSI1.390e-19656.10Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A067D907_SAPPC5.400e-9652.06NEK protein kinase n=3 Tax=Saprolegnia TaxID=4769 ... [more]
A0A2D4CC50_PYTIN1.030e-9552.06Protein kinase, putative n=1 Tax=Pythium insidiosu... [more]
A0A024GEG4_9STRA9.910e-9549.85Protein kinase domain-containing protein n=1 Tax=A... [more]
A0A024TV75_9STRA4.140e-9451.75NEK protein kinase n=2 Tax=Aphanomyces invadans Ta... [more]
A0A421GZU3_9STRA1.530e-9351.88Protein kinase domain-containing protein n=8 Tax=O... [more]
A0A8K1C5Y5_PYTOL1.930e-9351.26Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
F0WWJ3_9STRA3.360e-9349.85Protein kinase putative n=1 Tax=Albugo laibachii N... [more]
A0A484E015_BRELC3.370e-9352.37Protein kinase domain-containing protein n=2 Tax=P... [more]
M4BTA2_HYAAE9.890e-9352.72Protein kinase domain-containing protein n=12 Tax=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig605contigP-littoralis_Contig605:29847..38678 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FUQ7
Preferred nameNEK2
PFAMsPkinase
Model size3843
Max annot lvl2759|Eukaryota
KEGG koko:K20872
Hectar predicted targeting categoryother localisation
GOsGO:0000070,GO:0000086,GO:0000226,GO:0000228,GO:0000278,GO:0000280,GO:0000775,GO:0000776,GO:0000793,GO:0000794,GO:0000819,GO:0000922,GO:0001701,GO:0001824,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0007059,GO:0007088,GO:0007098,GO:0007275,GO:0007346,GO:0008150,GO:0008152,GO:0009790,GO:0009792,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010389,GO:0010556,GO:0010557,GO:0010564,GO:0010604,GO:0010638,GO:0010639,GO:0010948,GO:0015630,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0019902,GO:0019903,GO:0022402,GO:0022406,GO:0022607,GO:0030030,GO:0030031,GO:0030496,GO:0030997,GO:0031023,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032204,GO:0032206,GO:0032210,GO:0032212,GO:0032501,GO:0032502,GO:0032886,GO:0032991,GO:0033043,GO:0033044,GO:0036211,GO:0043009,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043392,GO:0043412,GO:0044085,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044770,GO:0044772,GO:0044782,GO:0044839,GO:0045786,GO:0045935,GO:0046602,GO:0046605,GO:0046606,GO:0046777,GO:0048285,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0051052,GO:0051054,GO:0051098,GO:0051100,GO:0051101,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051225,GO:0051276,GO:0051299,GO:0051338,GO:0051347,GO:0051493,GO:0051494,GO:0051640,GO:0051641,GO:0051726,GO:0051783,GO:0051972,GO:0051973,GO:0051983,GO:0051988,GO:0060255,GO:0060271,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070507,GO:0070925,GO:0071704,GO:0071840,GO:0080090,GO:0090307,GO:0097711,GO:0098687,GO:0098813,GO:0120031,GO:0120036,GO:0140014,GO:0140056,GO:0140096,GO:1901564,GO:1901987,GO:1901990,GO:1902749,GO:1902850,GO:1903047,GO:1903126,GO:1904353,GO:1904355,GO:1904356,GO:1904358,GO:2000112,GO:2000278,GO:2000573,GO:2001252
Exons9
Evalue2.3e-201
EggNOG OGsKOG1826@1|root,KOG1826@2759|Eukaryota
Ec32 ortholog descriptionProtein kinase domain
Ec32 orthologEc-19_004290.1
EC2.7.11.1
Descriptionnegative regulation of centriole-centriole cohesion
Cds size2901
COG categoryJ
BRITEko00000,ko01000,ko01001,ko01009,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig605.11.1prot_P-littoralis_Contig605.11.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig605 30345..38234 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791261.2161267-UTR-P-littoralis_Contig605:29846..303441680791261.2161267-UTR-P-littoralis_Contig605:29846..30344Pylaiella littoralis U1_48UTRP-littoralis_Contig605 29847..30344 -
1680791261.3474593-UTR-P-littoralis_Contig605:38234..386781680791261.3474593-UTR-P-littoralis_Contig605:38234..38678Pylaiella littoralis U1_48UTRP-littoralis_Contig605 38235..38678 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791261.229684-CDS-P-littoralis_Contig605:30344..309111680791261.229684-CDS-P-littoralis_Contig605:30344..30911Pylaiella littoralis U1_48CDSP-littoralis_Contig605 30345..30911 -
1680791261.239216-CDS-P-littoralis_Contig605:31341..319811680791261.239216-CDS-P-littoralis_Contig605:31341..31981Pylaiella littoralis U1_48CDSP-littoralis_Contig605 31342..31981 -
1680791261.2479491-CDS-P-littoralis_Contig605:32314..331451680791261.2479491-CDS-P-littoralis_Contig605:32314..33145Pylaiella littoralis U1_48CDSP-littoralis_Contig605 32315..33145 -
1680791261.263875-CDS-P-littoralis_Contig605:33582..336861680791261.263875-CDS-P-littoralis_Contig605:33582..33686Pylaiella littoralis U1_48CDSP-littoralis_Contig605 33583..33686 -
1680791261.2771015-CDS-P-littoralis_Contig605:34191..343181680791261.2771015-CDS-P-littoralis_Contig605:34191..34318Pylaiella littoralis U1_48CDSP-littoralis_Contig605 34192..34318 -
1680791261.2890196-CDS-P-littoralis_Contig605:35004..351711680791261.2890196-CDS-P-littoralis_Contig605:35004..35171Pylaiella littoralis U1_48CDSP-littoralis_Contig605 35005..35171 -
1680791261.3019664-CDS-P-littoralis_Contig605:35669..358321680791261.3019664-CDS-P-littoralis_Contig605:35669..35832Pylaiella littoralis U1_48CDSP-littoralis_Contig605 35670..35832 -
1680791261.311792-CDS-P-littoralis_Contig605:36623..367691680791261.311792-CDS-P-littoralis_Contig605:36623..36769Pylaiella littoralis U1_48CDSP-littoralis_Contig605 36624..36769 -
1680791261.3256369-CDS-P-littoralis_Contig605:38078..382341680791261.3256369-CDS-P-littoralis_Contig605:38078..38234Pylaiella littoralis U1_48CDSP-littoralis_Contig605 38079..38234 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig605.11.1

>prot_P-littoralis_Contig605.11.1 ID=prot_P-littoralis_Contig605.11.1|Name=mRNA_P-littoralis_Contig605.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=967bp
MENLYEVLQTLGRGSFGVVRKVRRREDGKTLVVKEMDYGAADEKQKEQIV
AEVNILRELRHPFIVRYYDRIVDRRRTRLHIVMEHCSTDLARVIKTRRLR
GEYLEETFLWNLMCQVVVALEVCHGRVGKGGARRPIIHRDLKPENVFLTS
ENVVKLGDFGLAKELSGAQLAETSVGTPYYMSPELINEQRYDERTDVWSL
GCLMYEASALTRPFNAHNQLALAMKINTGKVAPIPSRYSPGLFATIEWML
NKTRHKRPRMEDLIKVPGLQLPLRENRLLVQEFQLQQSYVRRLRTLKSRE
NEIERREAELAVQEARLLRRSEQSLADPTRSPREQCGWGKRLGSGGGAAS
ADCCCRCSPTSSFSERAATAVAVGAAGEREWRRQSPRPLAPTTRVSRLRQ
HEHHQHQQAEEQEEEEEEDKQRRRRRQQRQQQRRLRRGAAASPPACVPLP
GGRKSLSSAISSSSSSSGSGGSAGEAEERGVGLAMIEGDASGVRMPPPPP
RRTWEGRGGQGEDGQEDVTLVHQRRPVGDADPARRGGGVGSGGVGDRERT
AVGSGPEDCRASAPTSDKSELAQDVTRATAAVLDYASFVLHSSPRRHESP
VRRSRSSSSDSGGSDGRGMIEGKGGKHRHPVFRGGSVSGGGDNSKNSDDG
GGGGDCIENMAARVAAAGTTTSTTTPGVSPLRSSSCLDDTVPMDSHDPAI
VPVRPAPRTQQQQQQQYRYRYRGDDDASSFPDAGGGGGGVGVAVDKVGRR
RARGGWKDGAESHSIKTEAVMAAGRRARESYAGFMETIAAARNLGTRVAP
VRPPHENEENLHGAADTATAFRGTTTPHPCPSPNTPLVELPNGRGGREHR
NSRCPPTATLRSASTAAAAAWQDYKYRNGGAKEIRVGGGSSGRRVSHDDR
SASDATSAARGVGYLATPSPRGPRAGVGGNGRRRAAAAAASAVSDDVHLA
AVAMARARRGRLSSRC*
back to top

mRNA from alignment at P-littoralis_Contig605:29847..38678-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig605.11.1 ID=mRNA_P-littoralis_Contig605.11.1|Name=mRNA_P-littoralis_Contig605.11.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8832bp|location=Sequence derived from alignment at P-littoralis_Contig605:29847..38678- (Pylaiella littoralis U1_48)
AAGAAAGGCAAGCAGGTTGACCATCGCTTGATCTCACCACAGAGCGACAG
AGTGCCTTCTGCAACAAAGGTTAGTCAGCACGGCCGACGGCCATCTTGGT
AGTCTCAGCGAACCTCACACCCTGGCCAATTCTGGGAAAAATTTGCGCCG
AGTCGGCGAGGTTGCATTTCTGCTTCCTCTGCTGCTTGGTGTCTTCGAGA
TTATCTCTCTGCCAACACCCAACGGCAGAGAGACAGCAGCAGCAACGAGA
GCTAGCTTCTAGGAGCCCCCCTGAACACGCAACAACAACATCAGCAGCAG
GTCCACGACACGACTGTAGCAGAAGCAGCAGCGGCGGCGGTGGTTGCGGT
CGCTGTGGTGGTCGCGAGAGTGGTGGTGACTGTGGTGTCAGCAGCAGCAG
CAGCAGCAGCAGGAGCAGCGGAGTACAGCAGCAGTAGGAGAAAGATGGAG
AACTTGTACGAGGTCTTGCAAACGCTTGGGAGGGGCAGCTTCGGCGTGGT
AAGGAAGGTGCGACGCAGAGAGGACGGCAAGACTCTGGTGGTGAAGGAGA
TGGACTACGGCGCGGCGGACGAGAAGCAAAAGGAACAGATCGTCGCCGAG
GTATGATGTAGAGGCGGTGAACGGCAGAGAAGAACACAGCAGAGTGCATC
GACTCTCGAGAGAAAATGAGCTATGTACACCCTTTTCATACTGCAGTATT
GATTTGTACACATGACGGACGATTTTTTTTTTGAATCGGCAGCTCGGCAG
CATCATCCATCAAAGCACTTTGCTGTTGTCCAAGCTTGCGCTTTTAAGTC
TGAAACGTACTGCTTACGCTCTACTGGTACAACGGTACTCGTATGTGCAC
TGCTGTACACAGCAGTAGTGGCGGTGCAGCAGGAAAGCTCGCGGGGCTTG
TCATTTGCCAGGTGCCTGGTGTACGGCTATTTTGGTGCTAGTCGCTCTGC
CAGAACTTGGTCGGCTTGAATAGTTTTGCACACATTATCAAGCACATTTT
TAAACTTCGAAGTATTTTGTGGATATACGATAGCATACTGTACCTGGTTG
TACACCGTAGAATCTGAACACCAACCGCTCTGCCCGTCATGAAGAAAGCA
CGGGAGCACTACAGCAGAGCAGGTGCAGGATTTTTGTATGATACTTCGAA
GTACTTATCCGTAGGATATGGCCCCAAGATCCAGCCACTGCTGTAACCAG
CAACCTTTTGCAGATAAGAGCTCTCTAAAACATGTGCACAAAATATCATA
CCAGAAATACGCCCGTTGGCTATTTGTATCTTGACCAGGCCTATCTTGAT
CAGGCGAACACAGGGAAAAATTGTTACCGGTACACGTGCTTTGCGTACAG
CGACAGCAAGGTCAGATGTGGGCGACATGGGCAGCAGCAGTGTATGTTTG
TGTGTGTATGATATTCACATCCCATTTATCTTGGGCACCTGTCTACATCT
TTCGGTATGACGTGGGTGTACCAGCCAGCCGGGGTCACGCAACAGAAGGA
GGGCCGGCACGTATGATAGCAAAATCAGCCGCAAAATTGTTAACTTGTGG
AATGTGATCATGCGTTGAAAAGGAAGGTCGAGCCAAATCTCTCAACCCAG
TATCGTGCAAACTTTATCATGCCGAGGGCATCTATCGCTGCACCTGCGTC
GCAACTCCGTGCGGGCAGCAGCAGATGGTATATGGCAGCTTTTTATTTTT
TATTTTTTGTACCTTGGTGCGTGTACGTCACCATTCTGCGAACGGGGCCC
CCGACGACGACGGCGAACCATGCGTTCCCACATGCCACGATACGTGTGTT
TCGCAACAACCAGCAGTCCTAAACAACAAAGCCTCGTTCCCAATGAAAAC
TTGGAGGATGACTCAACTTATTTTTTTACAAACACCGCCGCGTTTGTGAT
ATGAAAAAGGTGAACATCCTTCGAGAGCTGCGGCACCCGTTCATCGTTCG
CTACTACGACCGCATCGTGGACCGGAGGAGAACGAGGCTGCACATCGTTA
TGGAGCACTGCAGCACCGACCTGGCCAGGGTCATCAAGACCAGAAGGCTC
AGGGGGTGAGAGGGAACAAAATCAATGTCATCCATCCAAATCTCGTTTTT
TTCCCTTTGTGACTACTGCTGTACGTACAACATCCGTAGTCACACGACAT
GGTGCTCGGGTTTTTTCGTTGGTGTTTCCAGTGAATGCAGCAAAGGCGGA
CGGTCTACTGCTGTAAGGGCTCTTTTTTTTTTTATCACGAGCTACAGCAG
TAGTGTAAGACACAGCAGACCCCCAATATTGAATGTCCGCAGCTTGTAGC
CGGAAGAGGTGTCGTCCACCGGTGGCGTTCAAAATGCATTCAATCTCAAT
CCCAGCTCCGTGGAGATCGTTACCCGATAAACTTGCTGTGAATTGCACTC
CAGCAGCAACAGTGCTCGCCCCAAGGAAGGCTAATATTTGCAGTGACACG
CGACACCTTTCGAAGGGCATTGTCGAGTTCTACACACAAGGTTTTTCCTG
CATTGGTAGAATTGTTGGATGAGGTCTTTCTGTAGAGCCTAGCCGTATCG
GGTTCGTCACGTGCCTCTCCCGCCCAAGCTACCGCTGCTAAATGAGTCGG
GCAAACACCACTCCAGCGTCAGAAGTGGCTCCAGCCGATGAAAGCACAGT
CAGAGCGCTCCCGTCGCGTCTCAACTGGGCTACGTTGCTAATCACCCAAA
GTTGCCCCCCACCCCGTCATTTTGTTTCCTCACAGAGTTCTTGTGATATG
CGTTATTGTAGGGCCTCATTTCTGGATAAACCAACGAACCCCCCCCCCCC
CCCCCCGCCCCCGCGTCACCCCCATCCCTAATTTTTCTTTCCTCAGGGAG
TATTTGGAAGAGACGTTCCTCTGGAATCTCATGTGTCAGGTGGTGGTGGC
GCTGGAGGTTTGCCACGGCCGCGTGGGGAAGGGAGGAGCGAGGCGGCCCA
TCATTCACCGCGACCTGAAGCCCGAGAATGTGTTCCTCACCAGTGAGAAC
GTTGTCAAGGTGGGCAATGAGAGCGACACACGCTGCAGATAAAAGAGAAT
CTGACCAGGTCAGGTGGGCCGGCGGGGGGGAGGAATATGAATGTGTAGGG
TTGAGACCCGAGGGGGGTGGGGGCGGGAGACTTTTCAAAACTTGCTGGCA
AGCGTGAGTTTTTAGTTTTTGAGCAACATCGTGTGTGTCCACGGGTTCTC
TGTGAGGCGTGGCGGTAATGGCGACCGCGCGACCCGTGTTCGTGTTCGAT
GTTGCTCGTGTTCGTGTTCGTGTTCGAATCCGTGTACGCCGTGCGAACGG
ACAAGTGCATACCACGACAAGGCGGTTCCCGTTGGGGACTTTTCGAAGAC
AGGAAACACAATTTCCTACATGAAATCTCCGAACGTGTCACGACTATCTG
TCTGTTCTACAGTGGCATTCACTTGCTGCACTGCTAGCTGTGGCCTTTTC
TTCCTTTTCTACGGTTGATGATAAAACTATTTGCGTATTTATTTTTCGTC
TGAACAGCTGGGAGACTTCGGGCTGGCCAAGGAGCTCTCCGGAGCGCAGC
TGGCGGAAACTAGCGTGGGCACCCCGTACTACATGTCGCCCGAGCTGATC
AACGAGCAGCGCTACGACGAGCGCACCGACGTCTGGTCCCTCGGCTGCCT
GATGTACGAGGCGTCGGCTCTCACGTGAGTTTTCACCAACAGCAATCACG
TCTGTGCCGCAGCTGCTGCTTTGTATTCCTGCCCGAAGTTGACGTTACAA
GCGACGCTGCGGTACGCACAGACAGCGGCTGCAGCTGCAGCAAATGTAAA
ACGAAAACTCTGCTTATTTCATACCGGTACCCCCGTACGTCTTGAGTTCA
TCTGAATAGAGTTGAAGGCGGGTTTTGGCGTGGCGTGGCTTTGGTTTGGC
GCACACGGGGGTCAAGAAAAAAATGTCCCCCCTGGCGGCAAAGATCCACC
ACGGGGGAGGTGCTGCCCATCTGCCCTCACCCCCGCCCAGGTACGCCTTT
TATTACGCTAGATAGAGACTTCCAAACCTTCCCGCATCGATGTTACTGGT
ACATACATTCATTGGGAGGTTTATTCTTAGACATGTATGATATGTTCGAT
GCCGCCTTTTACGCTAGATAGACACCTTTGTCTTCCAAACCTTCTCCGCA
TCAACGCTATTGGTACAGTACATACCTTCATTGAGAGGTTTATTCTTAGA
CATGCATGATATGTTCCATGCCGCCTTTTACGCTAGATAGAGACACCCTT
ATCTTCCAAACCTTCTCTGCATCAATGTCACTGGTACGTTCACTCATCGA
TAGGTTTCTTATTAGACATGTAGATACGTTCGATGCTTCATTGTGGGTGT
ATGTATGCAGGCGTCCTTTCAACGCGCACAACCAGCTCGCCCTCGCGATG
AAGATCAACACAGGCAAGGTGGCGCCGATTCCCTCCCGTTACTCCCCCGG
GCTGTTCGCGACGATCGAGTGGATGCTCAACAAGACGGTCAGTTTTTCTA
TTTTGTTTTTTTCGTGCTGCGTTGCCTCTGTTGTATTTCTTTCTCCTCCA
TGAGAAATTTATGGCACGCCCGCGGCAACTTTAGCAGCGCTCTGCGTATC
GTGACGATGGTCTAACTTGGGGTGCGTCTTCGCCTTCTTGGTTGCACCGG
CTGATGTGTGCGTAAGTTCGTCCGTTGCGGCGTTGACTGGAAGCCGGTCG
ACGAGTGACTGAAGCGACGTCTCGGCCGACATCTGGATAAAACCAAAGAG
CTTGCTGAATTCAAAAGTGTGTTTTCGTGTGTTTTCGTGTGTTTTCGTGT
GTGTGTGTATTTTCCCACTCCAAGACACAGCAAACGGTTGATTCCCTCTG
TGGATGTTGGTTGCGGCGATCCCAGGTGTGATTTTATTTTAGGCCATGAC
GCCTTTCCAATCCCGTCGATTCCCACACGTTGCACCAAACAATCAAACAA
ATATCGGGAATACCGTGAAACGCTTCAATAACACCCCGACAGCGGCACAA
GCGGCCCCGAATGGAGGACCTCATCAAGGTACCGGGGCTGCAGCTTCCCC
TTCGAGAAAACCGCCTGCTGGTCCAGGAGTTCCAACTTCAGCAAAGGTGG
GTTTGCAAGGGTTTCCTCGTTGCGTCGCTCGATTTTCTTTTTTGCTTTTC
CGATTTGTATTTTTTTTTCACGACGCCTGGCCTGCGGCGGTCTTTGTATA
GCCAAGTTGTAACAAGTGCAAGGTAACGCTGCTGTGGCGGTGGTGTCAGT
ACCGCCACGTAGTACGTAAAAGGCTCGGGTGCGAAGGAGAAGACACAGAT
GGTTTCTCGATGAACTACTTGGAGCCACAGCGTTGTTCCTTCCGTTGCGA
CCCGTCGTCGTTTTCATCACGCACGTCGCCCCCTTTGTTCACGCGGTTTC
ACAACCCCAAAAACAAAAACATAAACAAACCTAAACCAAAACCAAAACCA
AGCATTTTTTTTTTTTCAACTCGACGTGCCCCTCCCCCGCTCGTCCTCGT
CCTTTCGCACGAACTTTGACACCCACACGGCAGTTACGTGCGCCGCCTCC
GCACCCTGAAATCCCGCGAGAATGAAATCGAGCGGCGAGAGGCCGAGCTC
GCTGTCCAGGAGGCAAGGCTCCTGCGCCGCTCGGAGCAATCCCTCGCCGA
CCCCACCCGTTCTCCGCGGGAACAATGCGGGTGGGGGAAGCGTCTCGGCA
GCGGCGGCGGCGCCGCCTCCGCTGATTGTTGTTGCCGCTGTTCCCCCACC
TCTTCGTTCTCGGAGAGGGCGGCGACGGCAGTGGCGGTGGGGGCGGCGGG
CGAGCGCGAATGGAGGCGGCAGTCCCCGCGGCCGCTGGCGCCGACGACCC
GCGTGTCTCGGTTACGTCAGCATGAGCACCACCAGCACCAGCAAGCGGAG
GAGCAGGAGGAGGAGGAGGAGGAGGACAAGCAACGGCGGCGGCGGCGGCA
GCAACGGCAACAGCAACGGCGGCTTCGGCGGGGGGCTGCCGCTTCCCCCC
CGGCGTGCGTCCCTCTGCCGGGCGGGCGGAAATCACTGTCCTCTGCAATC
AGCAGCAGCAGCAGCAGCTCCGGGTCTGGTGGGAGCGCAGGAGAGGCCGA
GGAGAGGGGGGTGGGGCTGGCGATGATCGAAGGTGATGCGTCAGGGGTGC
GGATGCCGCCGCCGCCGCCGCGTCGGACGTGGGAGGGTCGGGGAGGGCAG
GGAGAAGACGGGCAGGAGGATGTTACGCTCGTGCATCAGAGAAGGCCTGT
CGGCGATGCCGACCCGGCGCGGAGGGGTGGGGGTGTTGGGAGCGGCGGGG
TTGGGGATCGGGAGCGCACAGCCGTGGGCTCGGGACCGGAGGACTGCCGC
GCTTCAGCACCAACGTGAGCGGAGCTTATGAGCTGAGCTCGCTATATTCT
TGGCACCTCCTTTCGTTTGGGTGGTTTTGTTTCTGTTTGTTTTTCATGAA
TTTCTTGTTGTTATTTTGGTCTCTGTTTATGCGCTGGTACGGCACGGTAT
GATACGTCGCACTGTCCCGTACAGCAGTACCTCGATGAGATTTACGGGGG
ATTTTTCAGGTTCCCGTTTTTTTCGCGAACATAAACTCGCACGACAAACA
GCAGTGTTAATTGAACCTAGGCATTTAATCTCTCCCCGCCCCGTCCCCTT
CCCTCCCCCATCCTTTCTCTCTCTCTCTCTTTACCCACCTTGAAAAGGAG
TGACAAGTCGGAGCTCGCTCAAGATGTCACAAGGGCGACCGCGGCCGTCC
TAGACTACGCCTCGTTCGTCCTGCACAGCTCCCCCCGCCGGCACGAGTCC
CCCGTCCGACGGAGTAGAAGCAGCAGCAGCGACAGCGGGGGCAGTGACGG
CAGGGGCATGATCGAAGGCAAGGGCGGAAAGCACAGGCACCCCGTGTTTC
GTGGCGGCAGCGTTAGCGGGGGTGGCGACAACTCAAAAAACAGCGATGAC
GGCGGCGGCGGTGGTGACTGTATTGAAAACATGGCCGCCCGCGTCGCTGC
CGCCGGAACCACCACCAGTACCACCACCCCGGGCGTATCTCCGCTTCGGT
CGTCTTCCTGCCTGGACGATACCGTTCCGATGGACTCGCACGACCCCGCG
ATCGTGCCTGTGCGACCCGCGCCTCGGACGCAGCAGCAGCAGCAGCAGCA
GTACCGATATCGGTACCGTGGTGACGATGATGCTTCTTCTTTCCCTGATG
CCGGTGGCGGTGGCGGTGGCGTTGGCGTTGCTGTCGACAAGGTGGGCCGG
CGGCGAGCGAGAGGCGGCTGGAAAGACGGGGCGGAGTCGCACTCGATAAA
GACGGAGGCGGTCATGGCTGCGGGGAGAAGGGCCAGGGTGCGTTTTTTTT
GGGGGGGGGGGATAATTGCTTTCGGTCAGTCACGTTTCTGGTTTTTCGTT
TGGTTGAGCGTTTCTGAAAATTCTTGATTGGTTGGGTGGATTGATTGCTT
GCTTGCTTGCCTGGCCCAGGGGTGAGTCGGAGTATAGTACTGCTGTACAC
AGTTGATTCGTTGAGACTGGCCTTCTCGCTGTCTACGCACAAGCGGGCGA
GTCGGGTTATAGAACTGCTCTGTACACAGTTGTTTCATCGAAACGACACC
GGTCGAACGCGCGTTTGTACCGCCCTCCTGGCTTTTGCGTCCATGCTTTG
CGTTGTACTTTGCGCGTCACACTGCTGTCGCGTAGATACCCTGTCCTGTC
CTGTCCTGTCCCCCTCCGACCTCCGCCAACTCCCTCCTGCGGCTTGCCCT
TTTCCCTCGCTCGGCAGGAATCATACGCCGGTTTCATGGAGACGATAGCG
GCAGCGCGCAATCTCGGTACAAGGGTTGCGCCCGTCCGACCGCCGCACGA
AAACGAGGAGAATTTGCACGGCGCCGCCGACACCGCCACGGCCTTCCGCG
GTACTACCACCCCCCACCCCTGCCCCTCGCCAAACACCCCGCTAGTGGAG
CTCCCGAACGGCCGCGGCGGGCGGGAGCACCGCAACAGCAGGTGCCCTCC
CACCGCCACCCTGCGTTCAGCTTCGACGGCCGCGGCTGCTGCCTGGCAGG
ACTACAAGTATAGAAACGGTGGCGCTAAGGAGATTCGAGTCGGAGGCGGC
TCATCCGGCAGACGGGTGAGCCACGACGACAGGAGCGCCAGCGACGCAAC
TTCGGCGGCGCGCGGGGTCGGGTACCTTGCGACACCGTCCCCGCGGGGAC
CTAGAGCGGGGGTCGGTGGCAATGGGAGGAGGCGAGCGGCTGCGGCGGCG
GCCTCGGCTGTGTCGGACGATGTGCACCTTGCGGCGGTGGCGATGGCTCG
GGCCAGGAGGGGAAGGTTATCATCCCGGTGTTGATTTATCGATTTTTGAT
GGATCTATTTTATTTTTTGGGGTGGTGGAGGTTGGGGGCAAAACGAGCGC
GCTCTACGAGTATGGCGAGAGGGGGAGGTTGAGGCAGACGATTGATAAGT
CGGTCCGCTGCGTCTGTAGAAACCGCACCTGGAATATTTTTGCCACGTTT
CGCAGGGCAGATCTCCGTGAACCAAGCGAGTGTAAAGCGGCGCGAGAGAC
TCCCTTTTGCATCGCGGCCTCGGGTGGCTCGCGGAACGTTGGCATCGGGG
ATGGCAGAAGCTAGTAAAGTCAAGTCGCCGCACGACTGTCCCAGCAAAAA
CCTTGGTTAACTCTTGGCTATTCCACTAGTATGTCAGGCTGTGGTTTGTG
AAAAATTCGGCCGTATGCCCGAGTACTACAGCACTCTCGCGCGATGACAC
CTCCATCGTTAGCTTTGTCCGTAGCACGGAAAACGAACGACATCAGGAGA
GTGGGTCACGCACGACGTGTTGGCATTGGGGG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig605:29847..38678-

>mRNA_P-littoralis_Contig605.11.1 ID=mRNA_P-littoralis_Contig605.11.1|Name=mRNA_P-littoralis_Contig605.11.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2901bp|location=Sequence derived from alignment at P-littoralis_Contig605:29847..38678- (Pylaiella littoralis U1_48)
ATGGAGAACTTGTACGAGGTCTTGCAAACGCTTGGGAGGGGCAGCTTCGG
CGTGGTAAGGAAGGTGCGACGCAGAGAGGACGGCAAGACTCTGGTGGTGA
AGGAGATGGACTACGGCGCGGCGGACGAGAAGCAAAAGGAACAGATCGTC
GCCGAGGTGAACATCCTTCGAGAGCTGCGGCACCCGTTCATCGTTCGCTA
CTACGACCGCATCGTGGACCGGAGGAGAACGAGGCTGCACATCGTTATGG
AGCACTGCAGCACCGACCTGGCCAGGGTCATCAAGACCAGAAGGCTCAGG
GGGGAGTATTTGGAAGAGACGTTCCTCTGGAATCTCATGTGTCAGGTGGT
GGTGGCGCTGGAGGTTTGCCACGGCCGCGTGGGGAAGGGAGGAGCGAGGC
GGCCCATCATTCACCGCGACCTGAAGCCCGAGAATGTGTTCCTCACCAGT
GAGAACGTTGTCAAGCTGGGAGACTTCGGGCTGGCCAAGGAGCTCTCCGG
AGCGCAGCTGGCGGAAACTAGCGTGGGCACCCCGTACTACATGTCGCCCG
AGCTGATCAACGAGCAGCGCTACGACGAGCGCACCGACGTCTGGTCCCTC
GGCTGCCTGATGTACGAGGCGTCGGCTCTCACGCGTCCTTTCAACGCGCA
CAACCAGCTCGCCCTCGCGATGAAGATCAACACAGGCAAGGTGGCGCCGA
TTCCCTCCCGTTACTCCCCCGGGCTGTTCGCGACGATCGAGTGGATGCTC
AACAAGACGCGGCACAAGCGGCCCCGAATGGAGGACCTCATCAAGGTACC
GGGGCTGCAGCTTCCCCTTCGAGAAAACCGCCTGCTGGTCCAGGAGTTCC
AACTTCAGCAAAGTTACGTGCGCCGCCTCCGCACCCTGAAATCCCGCGAG
AATGAAATCGAGCGGCGAGAGGCCGAGCTCGCTGTCCAGGAGGCAAGGCT
CCTGCGCCGCTCGGAGCAATCCCTCGCCGACCCCACCCGTTCTCCGCGGG
AACAATGCGGGTGGGGGAAGCGTCTCGGCAGCGGCGGCGGCGCCGCCTCC
GCTGATTGTTGTTGCCGCTGTTCCCCCACCTCTTCGTTCTCGGAGAGGGC
GGCGACGGCAGTGGCGGTGGGGGCGGCGGGCGAGCGCGAATGGAGGCGGC
AGTCCCCGCGGCCGCTGGCGCCGACGACCCGCGTGTCTCGGTTACGTCAG
CATGAGCACCACCAGCACCAGCAAGCGGAGGAGCAGGAGGAGGAGGAGGA
GGAGGACAAGCAACGGCGGCGGCGGCGGCAGCAACGGCAACAGCAACGGC
GGCTTCGGCGGGGGGCTGCCGCTTCCCCCCCGGCGTGCGTCCCTCTGCCG
GGCGGGCGGAAATCACTGTCCTCTGCAATCAGCAGCAGCAGCAGCAGCTC
CGGGTCTGGTGGGAGCGCAGGAGAGGCCGAGGAGAGGGGGGTGGGGCTGG
CGATGATCGAAGGTGATGCGTCAGGGGTGCGGATGCCGCCGCCGCCGCCG
CGTCGGACGTGGGAGGGTCGGGGAGGGCAGGGAGAAGACGGGCAGGAGGA
TGTTACGCTCGTGCATCAGAGAAGGCCTGTCGGCGATGCCGACCCGGCGC
GGAGGGGTGGGGGTGTTGGGAGCGGCGGGGTTGGGGATCGGGAGCGCACA
GCCGTGGGCTCGGGACCGGAGGACTGCCGCGCTTCAGCACCAACGAGTGA
CAAGTCGGAGCTCGCTCAAGATGTCACAAGGGCGACCGCGGCCGTCCTAG
ACTACGCCTCGTTCGTCCTGCACAGCTCCCCCCGCCGGCACGAGTCCCCC
GTCCGACGGAGTAGAAGCAGCAGCAGCGACAGCGGGGGCAGTGACGGCAG
GGGCATGATCGAAGGCAAGGGCGGAAAGCACAGGCACCCCGTGTTTCGTG
GCGGCAGCGTTAGCGGGGGTGGCGACAACTCAAAAAACAGCGATGACGGC
GGCGGCGGTGGTGACTGTATTGAAAACATGGCCGCCCGCGTCGCTGCCGC
CGGAACCACCACCAGTACCACCACCCCGGGCGTATCTCCGCTTCGGTCGT
CTTCCTGCCTGGACGATACCGTTCCGATGGACTCGCACGACCCCGCGATC
GTGCCTGTGCGACCCGCGCCTCGGACGCAGCAGCAGCAGCAGCAGCAGTA
CCGATATCGGTACCGTGGTGACGATGATGCTTCTTCTTTCCCTGATGCCG
GTGGCGGTGGCGGTGGCGTTGGCGTTGCTGTCGACAAGGTGGGCCGGCGG
CGAGCGAGAGGCGGCTGGAAAGACGGGGCGGAGTCGCACTCGATAAAGAC
GGAGGCGGTCATGGCTGCGGGGAGAAGGGCCAGGGAATCATACGCCGGTT
TCATGGAGACGATAGCGGCAGCGCGCAATCTCGGTACAAGGGTTGCGCCC
GTCCGACCGCCGCACGAAAACGAGGAGAATTTGCACGGCGCCGCCGACAC
CGCCACGGCCTTCCGCGGTACTACCACCCCCCACCCCTGCCCCTCGCCAA
ACACCCCGCTAGTGGAGCTCCCGAACGGCCGCGGCGGGCGGGAGCACCGC
AACAGCAGGTGCCCTCCCACCGCCACCCTGCGTTCAGCTTCGACGGCCGC
GGCTGCTGCCTGGCAGGACTACAAGTATAGAAACGGTGGCGCTAAGGAGA
TTCGAGTCGGAGGCGGCTCATCCGGCAGACGGGTGAGCCACGACGACAGG
AGCGCCAGCGACGCAACTTCGGCGGCGCGCGGGGTCGGGTACCTTGCGAC
ACCGTCCCCGCGGGGACCTAGAGCGGGGGTCGGTGGCAATGGGAGGAGGC
GAGCGGCTGCGGCGGCGGCCTCGGCTGTGTCGGACGATGTGCACCTTGCG
GCGGTGGCGATGGCTCGGGCCAGGAGGGGAAGGTTATCATCCCGGTGTTG
A
back to top