prot_P-littoralis_Contig603.52.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig603.52.2
Unique Nameprot_P-littoralis_Contig603.52.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length104
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig603.52.2 vs. uniprot
Match: A0A6H5KB41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB41_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 3.000e-13
Identity = 44/67 (65.67%), Postives = 48/67 (71.64%), Query Frame = 0 
Query:    1 GKALAQRPHEVMLRKESAVLKSKIASYREGRKAMGANIFGKGQCA-HDDAAAVPPKNKTESQHQGET 66
            GKALAQRP+EVMLRKESAVLKSKIASYRE RKAMG +IFGK Q    D+A      N    Q + ET
Sbjct:  126 GKALAQRPNEVMLRKESAVLKSKIASYRERRKAMGEHIFGKEQGRDQDNARGSSGNNGRALQQESET 192
[Close]
BLAST of mRNA_P-littoralis_Contig603.52.2 vs. uniprot
Match: D8LD21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD21_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 7.640e-13
Identity = 44/67 (65.67%), Postives = 47/67 (70.15%), Query Frame = 0 
Query:    1 GKALAQRPHEVMLRKESAVLKSKIASYREGRKAMGANIFGKGQCA-HDDAAAVPPKNKTESQHQGET 66
            GKALAQRP+EVMLRKESAVLKSKIASYRE RKAMG  IFGK Q    D+       N   SQ + ET
Sbjct:  186 GKALAQRPNEVMLRKESAVLKSKIASYRERRKAMGEQIFGKEQGPDQDNVRGSSNYNGQASQQESET 252
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig603.52.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KB41_9PHAE3.000e-1365.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LD21_ECTSI7.640e-1365.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig603contigP-littoralis_Contig603:160592..161508 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig603.52.2mRNA_P-littoralis_Contig603.52.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig603 160592..161508 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig603.52.2 ID=prot_P-littoralis_Contig603.52.2|Name=mRNA_P-littoralis_Contig603.52.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=104bp
GKALAQRPHEVMLRKESAVLKSKIASYREGRKAMGANIFGKGQCAHDDAA
AVPPKNKTESQHQGETDNGSGTVGGAAGSTPKRFGEQPEECKGWADDLLL
VRV*
back to top