mRNA_P-littoralis_Contig601.26.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig601.26.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 421 bits (1081), Expect = 1.160e-142 Identity = 195/253 (77.08%), Postives = 223/253 (88.14%), Query Frame = 2
Query: 236 QTKVMACLQVLARGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPTGDYQTKVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYD 994
Q KV+ACLQ+LARGN F DIYHMSFIS+ TA ATFH F R+FAREMY EHI+LPTGDYQ KVM++Y+RLGF+GA GSTDVTH+ WG CPYNQARS+TGKEGYPT+AYQVTVDHTKR LAVTPGFTG+TNDK+IIR+D AVT+IR DPIY+E+ + +Y+ADG Q KGCYLLVDNGYHKW TL+ P+KY I++ D FS RLES RKDVEC+FGIVKGRFRI KL+IPYHK+EDIDNVFFTCCILHNMLHSYD
Sbjct: 156 QLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYD 408
BLAST of mRNA_P-littoralis_Contig601.26.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 399 bits (1024), Expect = 4.050e-135 Identity = 183/252 (72.62%), Postives = 217/252 (86.11%), Query Frame = 2
Query: 239 TKVMACLQVLARGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPTGDYQTKVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYD 994
T+V+ACLQ+L+RGNVF DIYHMSFIS T +TFH FC++FA E+Y E++YLPTG+ KVM +Y+R+GF GA+GSTDVTH+ WG CPYNQAR +TGKEG PT+A+QVTVDH+ R LAVT GFTGATNDKTIIR+DKAVTRIRTDP+YTE+ Y LY DG +EKGCYLLVDNGYHKW TL+ P+K I++GD +FS RLES+RKDVECYFGI+KGRFRINKLAI +HK+E IDNVFFTCCILHNMLHS+D
Sbjct: 82 TQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFD 333
BLAST of mRNA_P-littoralis_Contig601.26.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 399 bits (1024), Expect = 8.000e-134 Identity = 183/253 (72.33%), Postives = 217/253 (85.77%), Query Frame = 2
Query: 236 QTKVMACLQVLARGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPTGDYQTKVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYD 994
+ KV+ACLQ+L+RGNVF DIYHMSFIS T +TFH FC++FA E+Y E++YLPTG+ KVM +Y+R+GF GA+GSTDVTH+ WG CPYNQAR +TGKEG PT+A+QVTVDH+ R LAVT GFTGATNDKTIIR+DKAVTRIRTDP+YTE+ Y LY DG +EKGCYLLVDNGYHKW TL+ P+K I++GD +FS RLES+RKDVECYFGI+KGRFRINKLAI +HK+E IDNVFFTCCILHNMLHS+D
Sbjct: 172 ELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFD 424
BLAST of mRNA_P-littoralis_Contig601.26.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 337 bits (865), Expect = 2.910e-111 Identity = 159/254 (62.60%), Postives = 196/254 (77.17%), Query Frame = 2
Query: 242 KVMACLQVLARGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPT---GDYQTKVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYD 994
KV+A L +L RGN F IY +S++S T Q FH FC+HFAREMY EHIYLP+ G+ VM +Y+RLGF+GA+GS DVTH+ W CPYN ARS+TGKEG PT+ YQVTV+H RA+AVT GFT +TNDKT + +D V +IRTD YTE+T+++Y+ DG T KGCYLLVDNGYHKW LM PTKY + + D +FS RLES RKDVEC+FGI+KG FRI K+A+ YH++E IDNVFFTCCILHNMLH++D
Sbjct: 98 KVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELD-HVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFD 350
BLAST of mRNA_P-littoralis_Contig601.26.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 336 bits (862), Expect = 6.470e-110 Identity = 158/253 (62.45%), Postives = 194/253 (76.68%), Query Frame = 2
Query: 242 KVMACLQVLARGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPTGDYQT--KVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYD 994
KV+ACL +L RGNVF IY++S++S PT Q FH FC HFA EMY EHI+LP+ + +VM +YE+LGF GA+GSTDVTH+ W CPYNQ RS+TGKEG PT+ YQVTV+H R LAVT GFTG+TNDKTII D+AV RIRTD Y E+ + ++ DG T KGCYL+VDNGYHKW L+ P+KY + + D +FS RLES RKDVEC+FGI+K RFRI KLA+ Y K+E +D VFFTCCILHNMLH++D
Sbjct: 127 KVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHD 379
BLAST of mRNA_P-littoralis_Contig601.26.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 330 bits (845), Expect = 1.410e-107 Identity = 165/281 (58.72%), Postives = 198/281 (70.46%), Query Frame = 2
Query: 242 KVMACLQVLARGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPTGDYQT--KVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYT----------------------------ERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYD 994
KV+A L +L RGN F IY MS++S T Q FH FCRHFAREMY E I+LPT + VM +Y+RLGFTGA+GS DVTH+AW CPYNQARS+TGKEG+PTIAYQVTVDH RA+AVT GFTG+TNDKTI+ +D AV +I TD YT E+T+++Y+ DG T KGCYLLVDNGYHKW L+ P+KY + + D +FS RLES RKDVEC+FGI+KGRFRI KLA+ Y +E IDNVFFTC ILHNMLH++D
Sbjct: 85 KVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFD 365
BLAST of mRNA_P-littoralis_Contig601.26.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 312 bits (799), Expect = 1.370e-101 Identity = 151/245 (61.63%), Postives = 178/245 (72.65%), Query Frame = 2
Query: 260 QVLARGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPTGDYQTKVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYD 994
QVL +GN F D+ +S +S AQ TFH FCRHFA EM+ EHIYLPTG Y +VM + +LG+TGA GSTDVTH+ W CP+ RSFTGKEG+PTIAY VTVDH R LAVT GFTGATNDKTIIR+D V +IRT YTER Y L A+G R +GC+L+VDNGYH+W TL+AP+KY DT FS LES RKDV C FRI KL +PYHK+E +DN+FFTCCILHNMLH++D
Sbjct: 42 QVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGC--------FRILKLRMPYHKREYVDNIFFTCCILHNMLHTFD 278
BLAST of mRNA_P-littoralis_Contig601.26.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 300 bits (768), Expect = 1.830e-97 Identity = 148/253 (58.50%), Postives = 182/253 (71.94%), Query Frame = 2
Query: 242 KVMACLQVLARGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPTGDYQT--KVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYD 994
+V+A L +L +GN F I+ MS++S T Q FH FCR FAREMY EHI+LP + VM +Y+RLG CPYNQARS+TGK+ +PTIAYQVTVDH RA+AVT GFTG+TNDKTI+ +D AV +IRTD YTE+T++LY+ DG T KGCY L DNGYHKW L+ P+KY + + D +FS RLES RKDVEC+FGI+KGRFRI KLA+ Y +E IDNVFFTCCILHNMLH++D
Sbjct: 20 QVLAWLTILGKGNCFASIFQMSWMSAKTVQGVFHKFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFD 255
BLAST of mRNA_P-littoralis_Contig601.26.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE) HSP 1 Score: 299 bits (765), Expect = 1.940e-96 Identity = 148/257 (57.59%), Postives = 179/257 (69.65%), Query Frame = 2
Query: 218 KSQAVNQTKVMACLQVLARGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPTGDYQTKVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHS 988
+ A N+ + L+VL +GN F D+ +S +S AQA FH FCRH A EM+ EHIYLPTG Y +VM + +LG TGA GSTDVTH+ CP+ RSFTGKEG+PTIAY+VTVDH RALAVT GF G TNDKT IR+D V +IRT+ YTER Y L +G R +GC+L+VDNGY++ N DT FS LES RKDVEC+FGI+KGRFRI KL +PYHK+E IDN+FFTCCILHNMLH+
Sbjct: 124 EKDAANREGIPLELKVLGKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIVDNGYYESNE------------DTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHT 368
BLAST of mRNA_P-littoralis_Contig601.26.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 289 bits (739), Expect = 1.330e-93 Identity = 135/210 (64.29%), Postives = 167/210 (79.52%), Query Frame = 2
Query: 371 MYHEHIYLPTGDYQTK--VMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYD 994
MY EHI+LPT + V+ +Y+RLGFTGA+GS DVTH+AW CPYNQARS+TGKEG+PTI YQVTVDH RA+AVT GFTG+TNDKT + +D AV +IRTD YTE+T+++Y+ DG T KGCY+LVDNGYHKW L+ P+KY + + D +FS RLES RKDVEC+FGI+KGR RI LA+ + +E IDNVFFTCCILHNMLH++D
Sbjct: 1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFD 210 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig601.26.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig601.26.1 >prot_P-littoralis_Contig601.26.1 ID=prot_P-littoralis_Contig601.26.1|Name=mRNA_P-littoralis_Contig601.26.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=266bp MVEGSFQKSQAVNQTKVMACLQVLARGNVFRDIYHMSFISVPTAQATFHSback to top mRNA from alignment at P-littoralis_Contig601:100090..102540+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig601.26.1 ID=mRNA_P-littoralis_Contig601.26.1|Name=mRNA_P-littoralis_Contig601.26.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2451bp|location=Sequence derived from alignment at P-littoralis_Contig601:100090..102540+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig601:100090..102540+ >mRNA_P-littoralis_Contig601.26.1 ID=mRNA_P-littoralis_Contig601.26.1|Name=mRNA_P-littoralis_Contig601.26.1|organism=Pylaiella littoralis U1_48|type=CDS|length=798bp|location=Sequence derived from alignment at P-littoralis_Contig601:100090..102540+ (Pylaiella littoralis U1_48)back to top |