mRNA_P-littoralis_Contig60.121.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig60.121.1
Unique NamemRNA_P-littoralis_Contig60.121.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig60.121.1 vs. uniprot
Match: A0A6H5KLG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLG6_9PHAE)

HSP 1 Score: 473 bits (1217), Expect = 1.210e-150
Identity = 356/710 (50.14%), Postives = 381/710 (53.66%), Query Frame = 3 
Query:  234 MPTQIAQMDMDQPVELIQSLSEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKHGSSTAGIESLAQDPESAIKFLVPNYLAGSLIGKKGATIKDIQLKASCMVRIATSGMYYPGTMERAVLVAGELAGVKKACGLILHTLHVPDNNESGCAKLVGPEKADTTDVTQRMLIPLTAGGLVIGRKGANITALLEASGAKVTLGQKADVKVHERLVTVQGKLTAATKAVEMLVDKLMEEPVLSRFANLSVNYRAHGSSQSKAAMAAGIAPSPLPYQRISRGGSPPPEDASDTADEGSDLCTAPAAA--VXXXXXXXXXXXSPLVAAVIVGDSASSSPATAATA----------------TAAGRRA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MFPVEQVMTNPVAAAIAACQPTTTVTVGVPNNMIGAILGPGGAIISELQSLSGARINVSQRDAFMPGTENRILTITGAPMATQTAQYLVSQKIEAFVERPRGW 1652
            MPTQIAQM+MDQPVELI    ++              XXXXXXXXXXXXXXXXX                       S+H +     ESLA+DP+SAIKFLVPN+ AGSLIGKKGATIKDIQLKASCMVRIATSGMYYPGTMERAVLVAGE  GVK+ACGLILHTLHVPDNNESGCAKLV  EKA+  +VTQR+LIPLTAGGLVIGR+GANI ALL ASGAKVTLGQKADVKVHERLVTVQGKLT+ATKAVEMLVDKL+EEPVLSRFANLSVNYR HGSS SKAAMAAGI P+PLPYQR  R  S P + ASD   E      A AAA   XXXXXXXXXXX   V  V++G S +SSPAT+AT                 TA G R                                                                                                                                                                                                                            MFP+E  MTNPVAAAIA+CQPTTTVTVGVPNNMIGAILGPGGAIISELQ+LSGARINVSQRDAFMPGTENRILTITG P ATQTAQYLVSQKIEAFV+RPRGW
Sbjct:    1 MPTQIAQMEMDQPVELIHQQEDDEQRSNSEVMDVEVQXXXXXXXXXXXXXXXXXPSSPAAVPTDDAGAESGSE----SRHDTRQ---ESLAEDPDSAIKFLVPNFQAGSLIGKKGATIKDIQLKASCMVRIATSGMYYPGTMERAVLVAGETEGVKQACGLILHTLHVPDNNESGCAKLVSEEKAEAIEVTQRLLIPLTAGGLVIGRRGANIAALLAASGAKVTLGQKADVKVHERLVTVQGKLTSATKAVEMLVDKLVEEPVLSRFANLSVNYRGHGSSHSKAAMAAGIVPAPLPYQRAPRDPSTPQKAASDAGTEPDTAAAAAAAASPXXXXXXXXXXXXXXXVTPVMIGSSVTSSPATSATGRRITSPPRLSSSSPRRTARGARGGGRMVGRGFGSGNVGNRFQPQQFRQQHQQXXXXXXXXXXXXXXXXHQFYRQQSGSMQXXXXXXXXXXXXXXXXXXXXXXXXHQQRLPMSPASIAPPTPXXXXXXXXXXXXXASMVVSLPMGPGGPMVSSPMQMAPMGPMSHPSATAPVYTMSYAPAPAGNLYHQGGMQAAPSMPGPVATVGGDGQPRGYPAMAVPPQXXXXXXXXXXXXXQQLPRQQLGMFPMEP-MTNPVAAAIASCQPTTTVTVGVPNNMIGAILGPGGAIISELQALSGARINVSQRDAFMPGTENRILTITGGPQATQTAQYLVSQKIEAFVQRPRGW 702
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BLAST of mRNA_P-littoralis_Contig60.121.1 vs. uniprot
Match: D8LGY3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGY3_ECTSI)

HSP 1 Score: 332 bits (852), Expect = 1.270e-102
Identity = 170/190 (89.47%), Postives = 180/190 (94.74%), Query Frame = 3 
Query:  495 ESLAQDPESAIKFLVPNYLAGSLIGKKGATIKDIQLKASCMVRIATSGMYYPGTMERAVLVAGELAGVKKACGLILHTLHVPDNNESGCAKLVGPEKADTTDVTQRMLIPLTAGGLVIGRKGANITALLEASGAKVTLGQKADVKVHERLVTVQGKLTAATKAVEMLVDKLMEEPVLSRFANLSVNYRAH 1064
            ESLAQDP+SAIKFLVPN+ AGSLIGKKGATIKDIQLKASCMV IATSGMYYPGTMERAVLVAGE  GVK+ACGLILHTLHVPDNNESGCAKLV  EKA+  +VTQR+LIPLTAGGLVIGR+GANI ALL ASGAKVTLGQKADVKVHERLVTVQGKLT+ATKAVEMLVDKL+EEPVLSRFANLSVNYR+H
Sbjct:   77 ESLAQDPDSAIKFLVPNFQAGSLIGKKGATIKDIQLKASCMVGIATSGMYYPGTMERAVLVAGETEGVKQACGLILHTLHVPDNNESGCAKLVSQEKAEAIEVTQRLLIPLTAGGLVIGRRGANIAALLAASGAKVTLGQKADVKVHERLVTVQGKLTSATKAVEMLVDKLVEEPVLSRFANLSVNYRSH 266
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BLAST of mRNA_P-littoralis_Contig60.121.1 vs. uniprot
Match: A0A836CIW2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIW2_9STRA)

HSP 1 Score: 212 bits (539), Expect = 3.660e-57
Identity = 151/376 (40.16%), Postives = 199/376 (52.93%), Query Frame = 3 
Query:  513 PESAIKFLVPNYLAGSLIGKKGATIKDIQLKASCMVRIATSGMYYPGTMERAVLVAGELAGVKKACGLILHTLHVPDNNESGC---AKL-VGPEKADTTDVTQRMLIPLTAGGLVIGRKGANITALLEASGAKVTLGQKADVKVHERLVTVQGKLTAATKAVEMLVDKLMEEPVLSRFANLSVNYRAHGSSQSKAAMAAGIAPSPLPYQRISRGGSPPPEDASDTADEGSDLCTAPAAAVXXXXXXXXXXXSPLVAAVIVGDSASSSPATAATATAAGRRAMFPVEQVMTNPVAAAIAACQPTTTVTVGVPNNMIGAILGPGGAIISELQSLSGARINVSQRDAFMPGTENRILTITGAPMATQTAQYLVSQKIEA 1628
            P  A+K LV N +AGSLIGK G TI+++QL++  +V+++TSGMY PGT +R VLV G+L  VK AC L+LHT+H     +  C   A L +G E+ D  +VTQR+LIP +AGGLVIGR G+NI  L E+SGA+V+L QK      ER+VT+ G L A    ++ML+D L  EP  + + NLSVNY AH          AG A +          GS     A  T          P   +            PL           + PA                    T+PVAAA+A     TT+TV +P+NM                S SGARINVSQR  F+PGT NR +TITG+P A Q AQ+L++ +I+A
Sbjct:   46 PPCALKLLVSNNMAGSLIGKAGQTIQNVQLQSGAVVKVSTSGMYLPGTQDRVVLVTGDLPRVKAACALVLHTVH-EQGRDRDCGVPAPLDIGTER-DALEVTQRLLIPASAGGLVIGRGGSNIKGLSESSGARVSLSQKQTSPSSERVVTIGGSLGACRLCIDMLLDTLKREPAAAVYTNLSVNY-AHPP--------AGAAAAXXXXXXXXXTGS-----AEATGISVDRHARQPLPPLPTYPPEMLDLIQPL-----------NMPAP-------------------THPVAAAVAGAAAVTTITVSIPDNM----------------STSGARINVSQRGDFIPGTSNRTVTITGSPAAAQAAQFLITHRIQA 359
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BLAST of mRNA_P-littoralis_Contig60.121.1 vs. uniprot
Match: A0A3B4YXF0_9TELE (RNA-binding protein Nova-1-like n=1 Tax=Stegastes partitus TaxID=144197 RepID=A0A3B4YXF0_9TELE)

HSP 1 Score: 169 bits (427), Expect = 6.090e-42
Identity = 123/383 (32.11%), Postives = 196/383 (51.17%), Query Frame = 3 
Query:  504 AQDPESAIKFLVPNYLAGSLIGKKGATIKDIQLKASCMVRIATSGMYYPGTMERAVLVAGELAGVKKACGLILHTLH-VPDNNESG-CAKLVGPEKADTTDVTQ--RMLIPLTAGGLVIGRKGANITALLEASGAKVTLGQKAD-VKVHERLVTVQGKLTAATKAVEMLVDKLMEEPVLSRFANLSVNYRAHGSSQSKAAMAAGIAPSPLPYQRISRGGSPPPEDASDTADEGSDLCTAPAA-----AVXXXXXXXXXXXSPLVAAVIVGDSASSSPATAATATAAGRRAMFPVEQVMTNPVAAAIAACQPTTTVTVGVPNNMIGAILGPGGAIISELQSLSGARINVSQRDAFMPGTENRILTITGAPMATQTAQYLVSQKI 1622
            A++ E  +K L+P+Y AGS+IGK G TI  +Q +    ++++ S  +YPGT ER  L+ G +  +      I   +  +P + +      ++ P+     D  +  ++++P +  GL+IG+ GA + A++E SGA V L QK + + + ER+VT+ G+     KAVE++V K+ E+P  S   N+S +  +   + S         P+  PY   +    P    A+ TA  G+DL    +A     +            +P  A+ ++   A+S+                       NP AAA  A      V + VP N++GAILG GG  + E Q L+GARI +S++  F+PGT NR +TITG+P ATQ AQYL+SQ+I
Sbjct:   28 AKEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNISYSNVSGPVANSN--------PTGSPYANTAEV-LPNAAAAAATAFSGNDLLAITSALNTLASYGYNTNTLGLGLNPAAASGVLAAVAASA-----------------------NPAAAAALADGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAAQYLISQRI 378
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BLAST of mRNA_P-littoralis_Contig60.121.1 vs. uniprot
Match: A0A3Q0SIN8_AMPCI (NOVA alternative splicing regulator 1 n=2 Tax=Cichlidae TaxID=8113 RepID=A0A3Q0SIN8_AMPCI)

HSP 1 Score: 161 bits (407), Expect = 1.860e-39
Identity = 120/379 (31.66%), Postives = 193/379 (50.92%), Query Frame = 3 
Query:  525 IKFLVPNYLAGSLIGKKGATIKDIQLKASCMVRIATSGMYYPGTMERAVLVAGELAGVKKACGLILHTLH-VPDNNESG-CAKLVGPEKADTTDVTQ--RMLIPLTAGGLVIGRKGANITALLEASGAKVTLGQKAD-VKVHERLVTVQGKLTAATKAVEMLVDKLMEEPVLSRFANLSVNYRAHGSSQSKAAMAAGIAPSPLPYQRISRGG--SPPPEDASDTADEGSDLCTAPAA-----AVXXXXXXXXXXXSPLVAA-VIVGDSASSSPATAATATAAGRRAMFPVEQVMTNPVAAAIAACQPTTTVTVGVPNNMIGAILGPGGAIISELQSLSGARINVSQRDAFMPGTENRILTITGAPMATQTAQYLVSQKI 1622
            +K L+P+Y AGS+IGK G TI  +Q +    ++++ S  +YPGT ER  L+ G +  +      I   +  +P + +      ++ P+     D  +  ++++P +  GL+IG+ GA + A++E SGA V L QK + + + ER+VT+ G+     KAVE++V K+ E+P  S   N+S +  +   + S         P+  PY      G        A+ ++  G+DL    +A     +            +P  A+ V+   +AS++PA AA   A G +                         V + VP N++GAILG GG  + E Q L+GARI +S++  F+PGT NR +TITG+P ATQ AQYL+SQ+I
Sbjct:   15 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNISYSNVSGPVANSN--------PTGSPYANTGEAGLTGMGAFPAAMSSLSGNDLLAITSALNTLASYGYNTNTLGLGLNPAAASGVLAAVAASANPAAAAAKLADGAK-----------------------DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAAQYLISQRI 362
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BLAST of mRNA_P-littoralis_Contig60.121.1 vs. uniprot
Match: A0A3Q2E648_CYPVA (RNA-binding protein Nova-1-like n=3 Tax=Osteoglossocephalai TaxID=1489341 RepID=A0A3Q2E648_CYPVA)

HSP 1 Score: 159 bits (403), Expect = 1.380e-38
Identity = 120/383 (31.33%), Postives = 203/383 (53.00%), Query Frame = 3 
Query:  507 QDPESAIKFLVPNYLAGSLIGKKGATIKDIQLKASCMVRIATSGMYYPGTMERAVLVAGELAGVKKACGLILHTLH-VPDNNE-SGCAKLVGPEKADTTDVTQ--RMLIPLTAGGLVIGRKGANITALLEASGAKVTLGQKAD-VKVHERLVTVQGKLTAATKAVEMLVDKLMEEPVLSRFANLSVNYRAHGSSQSKAAMAAGIAPSPLPYQRISRGGSPPPEDASDTADEGSDLCTAPAA-----AVXXXXXXXXXXXSPLVAA-VIVGDSASSSPATAATATAAGRRAMFPVEQVMTNPVAAAIAACQPTTTVTVGVPNNMIGAILGPGGAIISELQSLSGARINVSQRDAFMPGTENRILTITGAPMATQTAQYLVSQKI 1622
            ++ E  +K L+P+Y AGS+IGK G TI  +Q +    ++++ S  +YPGT ER  L+ G +  +      I   +  +P + + +    ++ P+     D  +  ++++P +  GL+IG+ GA + A++E SGA V L QK + + + ER+VT+ G+     KAVE+++ K+ E+P  S   N+S +      + S         P+  PY  ++  G+ P   +S +   G+DL    +A     +            +P  A+ V+   +A+++PA    A      A  P+  + ++ +A    A      V + VP N++GAILG GG  + E Q L+GARI +S++  F+PGT NR +TITG+  ATQ AQYL+SQ+I
Sbjct:   29 EEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGVHDFIAEKVREMPQSTQKTEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRKAVEIIIQKIQEDPQSSSCLNISYSNITGPVANSN--------PTGSPYAGLAGVGAFPTTMSSFS---GNDLLAITSALNTLASYGYNTNSLGLGLNPAAASGVLAAVAANANPAXXXXANLLASYATSPL--MASSLLATEKMAEGAKEVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSQAATQAAQYLISQRI 398
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BLAST of mRNA_P-littoralis_Contig60.121.1 vs. uniprot
Match: V8NGQ9_OPHHA (RNA-binding protein Nova-2 (Fragment) n=2 Tax=Bifurcata TaxID=1329961 RepID=V8NGQ9_OPHHA)

HSP 1 Score: 158 bits (400), Expect = 1.830e-38
Identity = 126/400 (31.50%), Postives = 193/400 (48.25%), Query Frame = 3 
Query:  498 SLAQDPESAIKFLVPNYLAGSLIGKKGATIKDIQLKASCMVRIATSGMYYPGTMERAVLVAGELAGVKKACGLILHTLH-VPDNN-ESGCAKLVGPEKADTTDVTQ--RMLIPLTAGGLVIGRKGANITALLEASGAKVTLGQKAD-VKVHERLVTVQGKLTAATKAVEMLVDKLMEEPVLSRFANLS--------VNYRAHGSSQSK------AAMAAGIAPSPLPYQRISRGGSPPPEDASDTADEGSDLCTAPAA------AVXXXXXXXXXXXSPLVAAVIVGDSASSSPATAATATAAGRRAMFPVEQVMTNPVAAAIAACQPTTTVTVGVPNNMIGAILGPGGAIISELQSLSGARINVSQRDAFMPGTENRILTITGAPMATQTAQYLVSQKI 1622
            S  QD E  +K L+P+Y AGS+IGK G TI  +Q +    ++++ S  +YPGT ER  LV G    +      I   +  +P +  +     ++ P+     D  +  ++++P +  GL+IG+ GA + A++E SGA V L QK + + + ER+VT+ G+     KAV+++V K+ E+P  S   N+S         N    GS  +       AA AA  A   L +  ++  G+ P   A+     GSDL     A      A            SPLVA+                       +    E+++ +              V + VP N++GAILG GG  + E Q L+GARI +S++  F+PGT NR +TITG P ATQ AQYL+SQ++
Sbjct:    6 SHTQDGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHNFIAEKVREIPQSVVKPESVNILQPQTTMNPDRAKQAKVIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPEGINLQERVVTISGEPEQIHKAVDIIVQKIQEDPQSSSCLNISYANITGPVANSNPTGSPYANSTDVLPAAAAAATASGLLGHTSLAGVGAFP---AALPGFSGSDLLAISTALNTLATAATGAANGYLGTASPLVAS-----------------------SFLATEKLVESA----------KDMVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGTPAATQAAQYLISQRV 369
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BLAST of mRNA_P-littoralis_Contig60.121.1 vs. uniprot
Match: A0A8C8C3R2_ONCTS (NOVA alternative splicing regulator 2 n=1 Tax=Oncorhynchus tshawytscha TaxID=74940 RepID=A0A8C8C3R2_ONCTS)

HSP 1 Score: 157 bits (398), Expect = 4.460e-38
Identity = 120/380 (31.58%), Postives = 191/380 (50.26%), Query Frame = 3 
Query:  516 ESAIKFLVPNYLAGSLIGKKGATIKDIQLKASCMVRIATSGMYYPGTMERAVLVAGELAGVKKACGLILHTLH-VPDN-NESGCAKLVGPEKADTTDVTQ--RMLIPLTAGGLVIGRKGANITALLEASGAKVTLGQKAD-VKVHERLVTVQGKLTAATKAVEMLVDKLMEEPVLSRFANLSVNYRAHGSSQSKAAMAAGIAPSPLPYQRISR------GGSPPPEDASDTADEGSDLCTAPAAAVXXXXXXXXXXXSPLVAAVIVGDSASSSPATAATATAAGRRAMFPVEQVMTNPVAAAIAACQPTTTVTVGVPNNMIGAILGPGGAIISELQSLSGARINVSQRDAFMPGTENRILTITGAPMATQTAQYLVSQKI 1622
            E  +K L+P+Y AGS+IGK G TI  +Q +    ++++ S  +YPGT ER  L+ G +  +      I   +  +P +  ++    ++ P+     D  +  ++++P +  GL+IG+ GA + A++E SGA V L QK + + + ER+VT+ G+     KAVE++V K+ E+P  S   N+S +  +   + S         P+  PY   +       GG P     + ++  G+DL    +A               L            +PA A+   AA   +  P      N +     A      V + VP N++GAILG GG  + E Q L+GARI +S++  F+PGT NR +TITG+P ATQ AQYL+SQ+I
Sbjct:   28 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNSVHSFIAEKVREMPQSAQKTEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNCKAVEIIVQKIQEDPQSSSCLNISYSNISGPVANSN--------PTGSPYANSAEAGLAGMGGFP----GTMSSFSGNDLLAITSALNTLASYGYNTNTLGL----------GLNPAAASGVLAAVAASANPAXXAAANLLKLGDGA---KDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAAQYLISQRI 382
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BLAST of mRNA_P-littoralis_Contig60.121.1 vs. uniprot
Match: P51513-5 (Isoform 3 of RNA-binding protein Nova-1 n=171 Tax=Gnathostomata TaxID=7776 RepID=P51513-5)

HSP 1 Score: 157 bits (398), Expect = 2.380e-37
Identity = 143/425 (33.65%), Postives = 216/425 (50.82%), Query Frame = 3 
Query:  507 QDPESAIKFLVPNYLAGSLIGKKGATIKDIQLKASCMVRIATSGMYYPGTMERAVLVAGELAGVKKACGLILHTLHVPDNN--ESGCAKLVGPEKADTTDVTQ--RMLIPLTAGGLVIGRKGANITALLEASGAKVTLGQKAD-VKVHERLVTVQGKLTAATKAVEMLVDKLMEEPVLSRFANLS--------VNYRAHGSSQSKAAMA----------------AGIAPSPLPYQRISRGGSPPPEDASDT-ADEGSDLCT-----APAAAVXXXXXXXXXXXSPLVAAVIVGDSASSSPATAATATAAGRRAMFPVEQVMT------------NPVAA-AIAACQPTT-----TVTVGVPNNMIGAILGPGGAIISELQSLSGARINVSQRDAFMPGTENRILTITGAPMATQTAQYLVSQKI 1622
            +D +  +K L+P+Y AGS+IGK G TI  +Q +    ++++ S  +YPGT ER  L+ G +  +    G I   +     N  ++    ++ P+     D  +  ++++P +  GL+IG+ GA + A++E SGA V L QK D + + ER+VTV G+     KAVE+++ K+ E+P      N+S         N    GS  +  A                  AG+A  P      +         A +T A  G +L T     + AAA  XXXXXXXXXX    AA ++   AS   A+A+ +TA G    F +  +              +P+AA AI   + +T      V + VP N++GAILG GG  + E Q L+GARI +S++  F+PGT NR +TITG P ATQ AQYL++Q+I
Sbjct:   46 EDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNISYANVTGPVANSNPTGSPYANTAEVLPTAAAAAGLLGHANLAGVAAFPAVLSGFTGNDLVAITSALNTLASYGYNLNTLGLGLSQAAATGXXXXXXXXXXPAAXAANLLATYASE--ASASGSTAGGTAGTFALGSLAAATAATNGYFGAASPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAAQYLITQRI 468
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BLAST of mRNA_P-littoralis_Contig60.121.1 vs. uniprot
Match: A0A1S3GH48_DIPOR (RNA-binding protein Nova-1-like n=3 Tax=Boreoeutheria TaxID=1437010 RepID=A0A1S3GH48_DIPOR)

HSP 1 Score: 152 bits (383), Expect = 1.350e-36
Identity = 114/377 (30.24%), Postives = 173/377 (45.89%), Query Frame = 3 
Query:  507 QDPESAIKFLVPNYLAGSLIGKKGATIKDIQLKASCMVRIATSGMYYPGTMERAVLVAGELAGVKKACGLILHTLH-VPDN-NESGCAKLVGPEKADTTDVTQ--RMLIPLTAGGLVIGRKGANITALLEASGAKVTLGQKAD-VKVHERLVTVQGKLTAATKAVEMLVDKLMEEPVLSRFANLSVNYRAHGSSQSKAAMAAGIAPSPLPYQRISRGGSPPPEDASDTADEGSDLCTAPAAAVXXXXXXXXXXXSPLVAAVIVGDSASSSPATAATATAAGRRAMFPVEQVMTNPVAAAIAACQPTTTVTVGVPNNMIGAILGPGGAIISELQSLSGARINVSQRDAFMPGTENRILTITGAPMATQTAQYLVSQKI 1622
            ++ E  +K L+P+Y AGS+IGK G TI  +Q +    ++++ S  +YPGT ER  LV G    +      I   +  +P    +     ++ P+     D  +  ++++P +  GL+IG+ GA + A++E SGA V L QK + + + ER+VTV G+     KAV  +V K+ E+P  S   N+S    A   + S         P+  PY                                                         +SPA    A AA        E+         +AA      V + VP N++GAILG GG  + E Q L+GARI +S++  F+PGT NR +TITG+P ATQ AQYL+SQ++
Sbjct:   29 EEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSN--------PTGSPY---------------------------------------------------------ASPADVLPAAAAAAGGFLTAEK---------LAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRV 331
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig60.121.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLG6_9PHAE1.210e-15050.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGY3_ECTSI1.270e-10289.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CIW2_9STRA3.660e-5740.16Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A3B4YXF0_9TELE6.090e-4232.11RNA-binding protein Nova-1-like n=1 Tax=Stegastes ... [more]
A0A3Q0SIN8_AMPCI1.860e-3931.66NOVA alternative splicing regulator 1 n=2 Tax=Cich... [more]
A0A3Q2E648_CYPVA1.380e-3831.33RNA-binding protein Nova-1-like n=3 Tax=Osteogloss... [more]
V8NGQ9_OPHHA1.830e-3831.50RNA-binding protein Nova-2 (Fragment) n=2 Tax=Bifu... [more]
A0A8C8C3R2_ONCTS4.460e-3831.58NOVA alternative splicing regulator 2 n=1 Tax=Onco... [more]
P51513-52.380e-3733.65Isoform 3 of RNA-binding protein Nova-1 n=171 Tax=... [more]
A0A1S3GH48_DIPOR1.350e-3630.24RNA-binding protein Nova-1-like n=3 Tax=Boreoeuthe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig60contigP-littoralis_Contig60:542814..553515 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LGY3
PFAMsKH_1
Model size3046
Max annot lvl2759|Eukaryota
KEGG koko:K14944
Hectar predicted targeting categoryother localisation
Exons8
Evalue2.69e-109
EggNOG OGsKOG2191@1|root,KOG2191@2759|Eukaryota
Ec32 ortholog descriptionK Homology domain
Ec32 orthologEc-14_001470.1
DescriptionRNA splicing
Cds size1422
COG categoryA
BRITEko00000,ko03041
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig60.121.1prot_P-littoralis_Contig60.121.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig60 544205..553282 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791251.738299-UTR-P-littoralis_Contig60:542813..5442041680791251.738299-UTR-P-littoralis_Contig60:542813..544204Pylaiella littoralis U1_48UTRP-littoralis_Contig60 542814..544204 -
1680791251.8558302-UTR-P-littoralis_Contig60:553282..5535151680791251.8558302-UTR-P-littoralis_Contig60:553282..553515Pylaiella littoralis U1_48UTRP-littoralis_Contig60 553283..553515 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791251.7537556-CDS-P-littoralis_Contig60:544204..5442671680791251.7537556-CDS-P-littoralis_Contig60:544204..544267Pylaiella littoralis U1_48CDSP-littoralis_Contig60 544205..544267 -
1680791251.7643754-CDS-P-littoralis_Contig60:544573..5448251680791251.7643754-CDS-P-littoralis_Contig60:544573..544825Pylaiella littoralis U1_48CDSP-littoralis_Contig60 544574..544825 -
1680791251.7760153-CDS-P-littoralis_Contig60:545620..5459801680791251.7760153-CDS-P-littoralis_Contig60:545620..545980Pylaiella littoralis U1_48CDSP-littoralis_Contig60 545621..545980 -
1680791251.7879248-CDS-P-littoralis_Contig60:546267..5464381680791251.7879248-CDS-P-littoralis_Contig60:546267..546438Pylaiella littoralis U1_48CDSP-littoralis_Contig60 546268..546438 -
1680791251.7988918-CDS-P-littoralis_Contig60:547430..5475381680791251.7988918-CDS-P-littoralis_Contig60:547430..547538Pylaiella littoralis U1_48CDSP-littoralis_Contig60 547431..547538 -
1680791251.8080952-CDS-P-littoralis_Contig60:547911..5480191680791251.8080952-CDS-P-littoralis_Contig60:547911..548019Pylaiella littoralis U1_48CDSP-littoralis_Contig60 547912..548019 -
1680791251.818792-CDS-P-littoralis_Contig60:548265..5483481680791251.818792-CDS-P-littoralis_Contig60:548265..548348Pylaiella littoralis U1_48CDSP-littoralis_Contig60 548266..548348 -
1680791251.8415866-CDS-P-littoralis_Contig60:553005..5532821680791251.8415866-CDS-P-littoralis_Contig60:553005..553282Pylaiella littoralis U1_48CDSP-littoralis_Contig60 553006..553282 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig60.121.1

>prot_P-littoralis_Contig60.121.1 ID=prot_P-littoralis_Contig60.121.1|Name=mRNA_P-littoralis_Contig60.121.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=474bp
MPTQIAQMDMDQPVELIQSLSEEQQQASNNISSEEEMDVEVESARQQAAA
AGGAVAAEVAPASSAAAAATAGGSDDESKHGSSTAGIESLAQDPESAIKF
LVPNYLAGSLIGKKGATIKDIQLKASCMVRIATSGMYYPGTMERAVLVAG
ELAGVKKACGLILHTLHVPDNNESGCAKLVGPEKADTTDVTQRMLIPLTA
GGLVIGRKGANITALLEASGAKVTLGQKADVKVHERLVTVQGKLTAATKA
VEMLVDKLMEEPVLSRFANLSVNYRAHGSSQSKAAMAAGIAPSPLPYQRI
SRGGSPPPEDASDTADEGSDLCTAPAAAVPAPSATVAAPASPLVAAVIVG
DSASSSPATAATATAAGRRAMFPVEQVMTNPVAAAIAACQPTTTVTVGVP
NNMIGAILGPGGAIISELQSLSGARINVSQRDAFMPGTENRILTITGAPM
ATQTAQYLVSQKIEAFVERPRGW*
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mRNA from alignment at P-littoralis_Contig60:542814..553515-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig60.121.1 ID=mRNA_P-littoralis_Contig60.121.1|Name=mRNA_P-littoralis_Contig60.121.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10702bp|location=Sequence derived from alignment at P-littoralis_Contig60:542814..553515- (Pylaiella littoralis U1_48)
CTACTTGTACTTCGTATGCAAGTACACCGCAGACCAGTCCGGATTTCCGC
CACTGCTGAACATTGGCGATCAAGGCGAAAGCGGTCCCCCATAGAACCAA
ATTTGCGAACACACACCCATCCACATCAAACACTCTTTTCGCCCAGCCTC
TCCTCCACAGCAACTCACAGCAGTGTAGAGTTTAGAGAGAGGACACAAAA
CAAAACACTGACAACAGGTGACACCCAGAGGGGATGCCAACTCAAATAGC
ACAAATGGACATGGACCAGCCCGTCGAGTTGATCCAATCCCTATCAGAGG
AGCAGCAGCAGGCCAGCAACAACATCAGCAGTGAGGAGGAGATGGATGTC
GAGGTCGAGTCAGCACGACAACAAGCGGCAGCAGCAGGAGGAGCAGTAGC
AGCAGAAGTGGCACCTGCATCATCGGCAGCAGCGGCGGCGACGGCGGGAG
GGTCGGATGACGAGAGCAAGCACGGAAGCAGCACGGCTGGTATCGAATCC
TTGGCGCAAGGTGTGTACAAGTACCCAATAACGATTAGTCGTGCAGCTAG
CTGAGTCGCGGCCTTCACGTGGAACGTGTGTGGTGTGGTGCACTCACTCA
TCGAAATATGTCATACGATGTACGCTGTACACAGAATCTCCAGCCAGCAG
CATCACCTCGGCCTCTCCTCCTTCTTTCTGTCAATCAATAAATATCGTGA
GAGTGTGGGTGCTCAAACAGTTTGTTTTAATTAATCTGAAGTTCTCTGAT
TTTACCCGTCTGTTGTGATGGAAACAGGGAAACGAAAATGCTGGGTGTTG
TTGGTGGGTGTGTACTGCTGCTGCTGCTGCTGCTGCTGCTTTGTGTTGGC
TGTGCCTACTCTCTGATATCGACTCGGGGCGTGGTAGCTTTGTTGTCTCG
TACTGCCCTGTCCTCCTCGTCGTACTTCTGGAGCACCGGTATTCGTTTGT
TTTTGTTCAACAAGGAGAAGTAGAACGACGGGTTGAGGTGTTGAGGTCCC
CGGCTCTACCGCAACAAACAGCAAGACACACACTGAACCGACCAGAGCGG
ACGGTTTTCTGAGAAACTCTCCGCCCAAAGAGACAGAATAGTAAAAAAAA
GGCAGGCAGACATGCATACATTTCGAAATGTACACAAGAGCACGTACACA
TCCGTTCACCGCTGGGATGCAAGTATCGTGTGTTCGATCCTGCTCCCTCT
TCTGGCATTCCCAAGAAGGGAGGGCGCCTGCCCCGTGTCCTGCCGTCCTG
CCCATCAGTCTCAGGCACGAGGAAAGCTCGCCATGCGTGAAGAAACAATC
ATGGGGATCGTTCCGAGCCTGCGTGCCGTACGTGGTCCGTATCCATGTCA
GTTCCCTCCAAAAATTCAGGGTCGCTGCTTTAATGGTTTGTATTTAACAG
GAGGACCTGCAGGACCTGACGTAGACGGTAAACAGCAGTTTGGCAAGATC
GTTTGTATAATATCATATGATCATATCATATCATAAAATAATGTGAGAAT
CAACAATCAAAATGTTCGAATGTACTTACTTCGAACAAGTGTTTTTATGT
TTTTGTAGACCAGACTCAGTCTCTGTGAGAGATAGGCAGGAGAGAGAGGA
TGAGCGCGGTAAGCGTGTGTCTCAAAAACAAGTATAGACAACTCAATCAC
GACGAGATGTTTTTGCGTTTTTACGTACCGGTATATACGAAGTACTGATA
CACAACAGCAGCATGATATGATACATAATATGAGAATCAACAACAACAAA
TACGCAACAGTAGCATGATAAATGTGATATGATAATCACGAAGTGCTTCG
TACTTTCTTTCCCAGGACGGCGGTATATGAGTCTATTCCGTTCATATCAC
ATGACATCCTCCATCATTGGTTTACTTCGAACCGAGTATATTCGGATACA
GCTGTAGGGTAAACTTCAGCGGTTCTTCTATCATTGTATGATATCAGTGT
TTTGGCTGGCCGCGGACCATCCGCCTATCGGAAAATTGCACGGAAAGTTG
GAAATTGGTCTCTATTTCAGTCCCTGTATTTCGCTTATTTCGTGCGGCGG
AGGTGATGCCACTTGCACGGCTGGAGGTCCACCATTTAGCCCCGTAACCT
TGGACTCTACAGGTAGACTCTGCCTCCGCACCCCTCTCTCTCTTCTCGGA
CCCTCGAGGAGTTCCGCAGAAGCAGAACACATCAAGCTGGAAGCTGTAAC
CTTGGACTCTAGACTCTGTCTCCGCATCCCTCTCTCTCTTCTTGGACCTT
TGATGAGTTCCGCAGAAGCAGAACACATCAAGCTGGAGGACACATCTGCA
GCAGAACTTTGTACACACTTCGAAGTATGCATTTACGTGACCTTTTTTCT
GCTATGATACATGCAATTCATGTATAAACATCATCCGCAGCAGCACTCAA
AGCAGCAGCAGCAGCATGGAGCAGCAGTCAGTTGGCTTTTTCTACTCTGT
ATGTTGAGCCATCGCGGAGCCTTCAACAAGATGTCATCGTCCTGGCCTCC
TGAACCTTGGTTTTATTTTTGCACCCACATGCTTAAAGGATACATTTTGA
AGCACGTGCGGCCCCTTTGCTTGTTGCTCTCGCCGTCTTCGCGAGTCGAT
CAACCAAACCAAAGAAGGAGCCATCTCTGTAATATAATCAAGTGTTGAAA
TTTCCCGCCCGTCATTCTGGACACTGCTGTTGTTCGAAAGCTTTGCCGTG
CATTCATCTATCGTACAAGTATAAAGGCACATGGTTGCATGCATGAATGT
GCACGCTGATATCATATGATATGGACACTTGTATTGCACAAGTACAACTC
ACACACATTATGTATGCCCTCTGTTCATGGATCATCAGCGGCAGTATATT
CCGGTATATATTCAGTTCAATATCCGACCTGCAGTATTCACATTTCCATC
GTTGTGCGTGGATAATCTGATTAGTAATTGGTATTATACGTCAAAACTCT
TCCGAGAGCTGAACCGCACTGCAGCACGAACCGGCATCCACAAGTCGAGG
ATTGTGTATAACATCATAATCCTGCTGTACAACCTTCACATTTCACATTC
ACACTTTGCTTTGTACAGCAGCAGTAGCTCGCCTGACGAACCACAAACTT
CGGGATAATATTCCACTGTCATGAATGAGAACAGTTTTTGTCGGGAATTA
TCCAGCATCCAGCTTTTCGGACCGAGACATTTATTATCTCTTTACTTGGA
ATGAACCATTAACCGCTCCAGACGAAAATACACGAAGTACGTATGCACGG
TATTATGCCGGGTAAACAAAAAATGAATCAGTCAGTGTCAGTCATCCAAA
ACTACGAATGCAACGTGTGTCACACAAGACGACCACCAAATTGTCTTGTT
GAGCCTGATAGCCTCAGGGGAGCTGCAACGGTACATCATCTGATGAGTAT
AGAAACACTGGTAGATGTATTTCACTCTTTGTGTTCGTTGCAATATCTGT
TCCAGATCCTTGTCTGGAAGCGAACACATTGATGTTTCGGTAAGTTTAAA
AAAAGAGTAGCAGTGGCTCTGTTCTCGGGAGGCTGGCTGGAAGCCCTTCA
AGAGCTCTTCGCATTGCTGTCTGTTTTTAGTTTTTGTTTCTTACCTCTCG
CATTGCTGCACTACATCATGCAGTTTTGTCTCAGCTCACCACGCTGTGTT
GCTCTGATCCTACAGCAGTTACTTCGTTTCGCTTCTTCTTTGGTTCCTCT
GTTGATAAAATCAACAACGTTTACAGCAGTGGTGTTGGTTTGAATCCTCT
CTCTTGTCTTGGTCTGGAACCAAACCAAAAACCACAAGCGGTGTATTGTA
AATTCAGAATACTTTCACCTTGAAGTACCTAAGAATGTATTATAATATGT
ACAGACAGCAGCAATACTACATGATGTGATGATATGATCCATCATGCACG
TACATGATGTGATAATATGATGTATCATGTACGTACACGTACCATGATGT
ATTTGTAGTTGGGTTTTGAGAACTTTGTTTTGTTCCGAATATACCGGTAC
GAAGGAAGTCTCATGTATACCCCCGAGGCAGCAGTATCATCAGTGTTGAA
CGTGTGATTGGAGCTCCTGTAATGTGAGAGTGTGGTCTCTCAGGGTTGGC
TGCTGCTGCTACTGCCGCTAGTGCTGTAGCCCCGTGCATCAATAACTACG
TTCGTCACCCATCCGCCCCCGCCTCCCGCGAGAGCTCGCTGCAAACAACC
AACCGCACAGAGTAGCCGATCAGCCAATCTTGACGCTTTAGGGGGGCTGT
CTGAAAGTCCCCAAAGCTCCCGACATACTGCTTTCTACATGAGCACGTTG
TTGTAAATTACCCCGCTTTCTTTTCTGGCGCGTTTCAACAGCACCTTCGT
ATTCTCGCCTCGCGAACCACGACGCGTGAACCGCCACTTGTAAAAAAAAT
AGGAATAAAAACAAGAACAACACTCAAACCACATGATATATGCGAAGCAT
TTTTTGTCGTGAAATGGGAACTTTTTTTTCTAATCCGAATTATTTCCGCA
CAGTATTATTTCTTCGGGGTTCCATACCGTGCCGCCGCTAGGTTCGCTCT
AGGGTAAGTCCCACTCAGCCCTCCGACAACGTCACGTCAGTCATCATCCC
TTCCCCTCGACACAAACAGCGGACTCGGCAAATTCATATTCCTGTTTTTA
GCAGAGAGAGGCTGGCTGGATGGCCCAAGACATGACTACGATGATACCTG
AAAGCTTCGAAGGTCTTAGTTCGTCATCACCCAGAGCCGTTTTTCTCAAT
TCATCGCGCTGTTTTGATCCGTCTTTCCTCTCTTCAAGTAGTCAACAGCA
GTCATCCAGAGTTGGTTCCAACCTTGACCTTTGCGAGAAAGAAGAATACG
AAGTACTTGGGTAGTGCAACAGTTTACCCGTTTCAATATACTGGTATGAA
TCGTACTTCTATGTACTTCAATGATTGTAGTTAATCACACACACACCTGG
CGGCGAATCAAATCAGACCTGCTGTGAAGTACGGCGTAGTCAAGAACCGA
ATTTCAAGGTGTTCCGCTGGTGGTTGAGTTATTTTTGCATCTGGTCGTGT
TGTTGTTGAACTAAACGCAACGCACACGCAAGCTCTCCGCACCACGCGAA
CTCATCATGCTTCCAACCGCCGCCCTCTCCCCCGGACAACGCCGCCGTAA
ACGTGATTTTCGCACAGACCCTGAATCGGCCATCAAGTTTCTTGTTCCAA
ACTACCTGGCCGGGAGCTTGATCGGAAAGAAGGGCGCAACAATAAAAGAC
GTGAGGGTTGTGTACTGCTGTAAGTATTTTTTGCGTTGGTTTCAGTTTTT
TTTTAAGTAGCTTGCCCTCTAGTAAGATTCTATGTACGTTATGCAGAGCG
CATCCAACGTAGCCATCCCAGCCCGCCCCCGCCCTGCGATAACCCCTCGA
CTACTTCCTTGACCTCTGCCAGCCGACTCGTGGATAATTTGTTCTTCTGC
TGTGGGTGTCAAACGAAGAAAAAAAACGAAATTGATTGTCGTACAGATCC
AGCTCAAGGCCTCGTGCATGGTTCGGATTGCCACGAGCGGGATGTACTAC
CCCGGGACGATGGAGAGGGCGGTATTGGTGGCGGGGGAGCTGGCCGGAGT
AAAGGTGAGCGAATACAACGTGACAAGCAACACACGACGACGTTGGTGAA
CAAATATTCGAGAGGTAGGTGTGGGTGTTGGTTGGTGGATGGACATGGGT
GGCGGACGGGACATCAGATACTTTTTCTAGCGGTAAATGTTCAAGATGGC
GGTGTTGGTTGCGGGGGCGATCGTAAGAGTAATAGCAGTATGGAGCCTTT
GGTGCTTGTAGGGGAGGACCTCCTGTTTTGCGCGTGGTCATGTCTCCTTC
GACGTTTCTGCACTTTTTGGTCGCGTTCAAACCCGCCTTGTCGTAACGTT
TCTGCACCCCCCCCCCCCCCCCCCCCGCGCTTTCCCCACTTTCTCCTGTA
TGCACGGCGTTCGTTGGTCGTTTCCAGAAAGCGTGTGGTCTGATCCTACA
CACGCTGCACGTGCCGGACAACAACGAGTCGGGGTGTGCTAAGCTGGTGG
GCCCGGAAAAGGCGGACACCACGGACGTTACGCAGGTTCGTGCGTACACG
CCGTTTTCGTGGGCACCCCTCAACAGCAGTTGTTATTGTTGTTGTTGTTG
TCTTCACATTAAAAACCATTCCGATATCTCCTCAGTACCTTGTAATGTCC
GTTCTCCACCGATCAGGTACGATTTCCGTGGTCACAGGCTGCTTGCCCCA
AAAGAGGTATATAGTACTCGGGAGATCCCCTCAGTCCACCAAATAAAGGC
ACAAGGAAACTCTCAAAAACAAAAACGGACCCCGAGAAATCACACAACGC
TGTCCAAAAATAGAACAAGAAACAAGAAAACAAGGAAAGGGAGCCTGGTC
CAGGGCCAAGTCACAAAATTAAAAAAAAAGTAACAGAGGAGTGACAAAAA
GACAAAAAGACACCGAATTCAGTTGCCAAGGTGTCGATAAAAATGGACAT
CGGGCGTGCTACTCTCTTCACCGGCCCAGTAACAGTTTCAGGCAGCGCAA
GTACGCAGACGTGAAGGGGGCAAAAAGGCAGAAGGGCAGAGAAACAGAGA
ACACAAAAATAAAACTTCCAAGGACGTGGTAGCTCAGTCCACGGTAACTC
AACAAACAGAGGTGGGCGCACTGATGCAGTGGGGAAACGGATGAGAAGGG
TTAGTGCTATCACAGCAGTGTCAAATCAATCTGGTGCATATGCCGTGCTA
CTCTTTCCATCAATACAGTGCAAAAAACAGCAGTAATCACGGACATGGGC
AAGTTTCGAAGGGTTGTTCCGCGCTTTTCATGCACACACACGCACGCACA
CACAGTCGAGCTTACACGAATTAAAGGTTTGACGTATTTATGATTCAACA
GACAGCTCGAATTCGGAGAACGATGTTTTGTACTTGGGAGTATCGTATCA
GCATAGTTTCGTGTTATTTTTTTGGGCTAGATTTTTTTCATTCGCCTTGC
CCTCTAGTCCCAAGCCGTCTCTTCCTGCCCCCCCGTCTTTTTCGTGCTGT
GTCATGTGTTTTTTTTCGTGCGTGCAGCGCATGCTCATTCCGCTCACGGC
CGGTGGGTTGGTGATCGGGCGCAAGGGGGCGAACATCACCGCCCTTCTCG
AGGCATCGGGGGCCAAGGTGACGTTAGGGCAGAAGGCCGACGTAAAGGTG
CACGAGAGGCTGGTGACCGTGCAGGGCAAGCTCACAGCGGCAACCAAGGT
GACCAAATTTTATAGAGATAATAACACGAAAAGAGAAAAGGAAAGAAAAC
GTTGAAATCTTCTCGTCGGCTCTTGTGTTGCTTTCGGCTTTTTCCTTTTA
TTTTTTTGCAAACTAGTACGGCCGCGGCAAGTACGGGGTCTGGCACCCGC
ACTTACTAGACAGTCATTTCGCTTTTTGCACGACGTTATCGGTTCTTGCG
CAGCCTGAGTTTCTCTATGCATCCCCGAACCTCTGTTGACCCCTCCGCTA
CCACCGCCGCCGCCGCCACGCCCACTTATCCGCAGGCCGTCGAGATGCTT
GTGGACAAGCTGATGGAGGAGCCGGTGCTATCGCGTTTCGCGAACCTCAG
CGTAAACTACAGGGCCCACGGCTCTAGCCAGTCCAAGGCAGCGATGGCGG
CAGGGATCGCGCCTTCCCCGCTGCCGTACCAGCGGATCTCTCGCGGCGGC
TCTCCGCCTCCGGAAGACGCATCGGACACCGCCGACGAAGGCTCGGACCT
GTGTACCGCCCCCGCCGCTGCTGTTCCAGCCCCTTCGGCCACCGTTGCGG
CCCCTGCTTCCCCTCTGGTCGCCGCCGTCATAGTCGGCGATTCCGCTTCT
TCCTCGCCGGCGACGGCGGCGACGGCCACCGCGGCGGGTCGGAGGGTGGC
GGCTTCGCCACCGAGGCCGCCATTGAAGCCGCCGTCACCGGCTAGGGCGG
CCCGCGGTGCCCGCGGCGGTGGAAGGGTTTTCGGGCGGGGTTTCGGGTCT
GGGGGCGTTGGGAACAACCCCAGATTTCAGCCTCAGCAGCAGCCGTATCG
ACAGCACCACCACCAGCAACAATCGCCGTACCGCCAGCCGCAACAGCAAC
CGCCCCGTCAGCACCAGCAGCACCGACAGCACCGACAGCACCAGCAGCAG
CACCAGCAGCACCAGCAGCACCTGCAGCAGCAAGGCCTTCACTTTCGCCA
GCACCCGCAGCACCCGCATCAGCAGCAGCAGCAGCAGCAGCAACAACAAC
AACAACAACAACAACAACAACAACAACAACAACAACAACAGCCTCTGACG
ATGTCTCCCGCCCGAATGACGCCACCCTCGCCGCCTGCGGTGTCGCAGGT
ACAGCTGCCCCAGCACCCACAACAGCCGCCCCCGATGCCCATGATGTCGC
TGCCGTTGGGTCCGGGCGGGCCCGGCCAGCCGATGATGACCGGCCCGGCG
CAGATGGGCCCAATGGGTCCGATCTCTCACCCTCCTCCTCCCCCTCCTGC
CATACCTATGATGGGGATGTCGTACGCTCCCGCTCCCGCTGTCGCCAGCT
ACCACCCGGCGGGAGGGTTAGGTATGGTCGCCCAGGGGATGCCCGGACCG
ATGGGCATGGTCGGAGGTGACGGGCAGGCTCGGGGATACCCCGCCGCCAT
GGCTCTGCCACCGCAACAGCAACACCAGCAGCAGCAGCAGGCGATGTTTC
CCGTGGAGCAGGTGATGACGAACCCGGTCGCGGCCGCGATCGCGGCGTGC
CAGCCGACCACCACCGTTACCGTCGGCGTCCCGAACAACATGATCGGGGC
CATCCTGGGGCCCGGGGGCGCCATCATCAGCGAGCTCCAGTCGCTGAGCG
GGGCGAGGATAAATGTGAGCCAGAGGGATGCTTTCATGCCAGGCACGGAG
AACCGCATCCTCACCATCACCGGAGCTCCGATGGCGACTCAGGTAAGACA
GAGAGGTAGAGGCCGTTTCCCACCGGTCAACATTGAGCGAAAGTGTGACA
CGTCAAATCGCGTACGTACAAGTACGTATCCTGGAATCGACGAACGCGTT
TTTTTTTGCCTGTTGTAGACTATTTCCTGCCTTCCCTCCACGGCGCTTCT
CCTGCTTCGGTGTTGACGTATGGATATAAGGGCGGTAGGTCCCGCTTTAT
CACGTTTTTATTCTCATGGGTACTCTCTCGTTTGACTGCGGGCTAAAACC
CTTACCTGACCCCCCCCCCCTCCCACACGCTGCGTCACCTCCTTGCAGAC
CGCGCAGTACCTGGTTTCCCAGAAGATCGAAGCGTTCGTGGAGAGACCAA
GAGGGTGGTAGATTGCGCCTCGACAAAAGAAAAAAACAACTGCGCTGTAT
CGAATCGTGCATGGCGAGTGAGGATGTCGTGCTGCCTGCTGCAGTATCTG
TCGACGAGCCTACCCGACAACAAGCCGAGGAGGTCATCTTCTCTTGCAAA
CACCGCGGACCGAGGGTCGTGAGTGTCCCTTGGACCCTCGTTGAAATTCA
TGTGTTCGAGAGGACGAAGTGAGAAGGGGGGCCGGCTTCTTGGACAACAC
GCCCCCCCCGCGGCCTCTTTCCGCCCCCCATGCCCCCGCCGATGTTTTTG
CGTGGTGTGACGAGGAGGGAAACACATGGCGAGTTATTTTTTTATGGCTT
GAGAACGTCCTGCGCGAATAAATCAATCCCGTTGGTTGGTGAGGGCGCAG
CCGTCTTGCACTGATTGCTTTGCTTGCTGGCTGCGGGTTGACAAATGTGT
GGCAGTTCTACGTGCTTGCTCTGCGGTAATGCCTCTGTTGTTTTTCTGTT
GGGTGAATGAGCCGCAGCAGCAGCTTTTGATGTACCAGGTAGCATGCAAG
TGAGGGAGGCCGTGGGGTAGGTGGGCGGTGAAACTGCTGCTGCTGCTGTT
GTGTTTGGTGTAGTTTATAGTTTTGGCGCGCACAACGGCAGCCTGGCGAG
CCGAGCAGGGGCGCTGTTGTCCGTCGGGTGGGGTGTATTGTTGGAAGCCG
CGGAACCCCTGTTGTAGACGACGCTCTTGCTTATGATGTGCTCTGATGGA
CGGAAGCTCTTGAGCACCCGTTCACAGACAGTCCGTGTTCTTGAACAGCG
CACGTGCGCACGCTTGAGTAGTACTGTTAGGAGCGAACAATAGTGCATAT
TTTGTGTGTTGGATGCGTGGTCCTGTACCGTTAGCGGCAAGAAAGGTTAC
GGTGTCTATAATGCTGTATGGTTAAAAATAATACTTTATTTTTACGTTGC
GAGATTTTGTGTGTTTTTTATTGTCCGACAGGTACAGAAGTTGCTCTTTC
TGCGTGTGTGTACTCCGTTTTGCGATTTGTACGTGTATCTTGCGAGGAAA
GAATCACTTGGAGCAGAGATTGAGGGAGACGATGGCAGCGGTAGTCCCCA
AGTGTGTAGTCGGCAAAATACAGCCAGGAAAGTCGTTTTTATTATGACGC
AGATGCACACACTTTGATCGATCCACGTTGGCTTAGACGGCCTATCACAC
ACGGGCTTTGATTTTCTTTCTTGGCATTTTTGGTCTTGAAAAGACATACT
GTACCCTTTTCAATGACGGTAGGAAAGCCCGCCCCCCACCCCCCCACCAA
CCCACTCGCACCCGCCCTTCGCCCTCCTCGCCCTGACATTCTGTGATGCT
TGCGTTATCCCCGTTCAGAGAGGCGTGTACTCTCTGCTTGGTTGATTTTG
TC
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Coding sequence (CDS) from alignment at P-littoralis_Contig60:542814..553515-

>mRNA_P-littoralis_Contig60.121.1 ID=mRNA_P-littoralis_Contig60.121.1|Name=mRNA_P-littoralis_Contig60.121.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1422bp|location=Sequence derived from alignment at P-littoralis_Contig60:542814..553515- (Pylaiella littoralis U1_48)
ATGCCAACTCAAATAGCACAAATGGACATGGACCAGCCCGTCGAGTTGAT
CCAATCCCTATCAGAGGAGCAGCAGCAGGCCAGCAACAACATCAGCAGTG
AGGAGGAGATGGATGTCGAGGTCGAGTCAGCACGACAACAAGCGGCAGCA
GCAGGAGGAGCAGTAGCAGCAGAAGTGGCACCTGCATCATCGGCAGCAGC
GGCGGCGACGGCGGGAGGGTCGGATGACGAGAGCAAGCACGGAAGCAGCA
CGGCTGGTATCGAATCCTTGGCGCAAGACCCTGAATCGGCCATCAAGTTT
CTTGTTCCAAACTACCTGGCCGGGAGCTTGATCGGAAAGAAGGGCGCAAC
AATAAAAGACATCCAGCTCAAGGCCTCGTGCATGGTTCGGATTGCCACGA
GCGGGATGTACTACCCCGGGACGATGGAGAGGGCGGTATTGGTGGCGGGG
GAGCTGGCCGGAGTAAAGAAAGCGTGTGGTCTGATCCTACACACGCTGCA
CGTGCCGGACAACAACGAGTCGGGGTGTGCTAAGCTGGTGGGCCCGGAAA
AGGCGGACACCACGGACGTTACGCAGCGCATGCTCATTCCGCTCACGGCC
GGTGGGTTGGTGATCGGGCGCAAGGGGGCGAACATCACCGCCCTTCTCGA
GGCATCGGGGGCCAAGGTGACGTTAGGGCAGAAGGCCGACGTAAAGGTGC
ACGAGAGGCTGGTGACCGTGCAGGGCAAGCTCACAGCGGCAACCAAGGCC
GTCGAGATGCTTGTGGACAAGCTGATGGAGGAGCCGGTGCTATCGCGTTT
CGCGAACCTCAGCGTAAACTACAGGGCCCACGGCTCTAGCCAGTCCAAGG
CAGCGATGGCGGCAGGGATCGCGCCTTCCCCGCTGCCGTACCAGCGGATC
TCTCGCGGCGGCTCTCCGCCTCCGGAAGACGCATCGGACACCGCCGACGA
AGGCTCGGACCTGTGTACCGCCCCCGCCGCTGCTGTTCCAGCCCCTTCGG
CCACCGTTGCGGCCCCTGCTTCCCCTCTGGTCGCCGCCGTCATAGTCGGC
GATTCCGCTTCTTCCTCGCCGGCGACGGCGGCGACGGCCACCGCGGCGGG
TCGGAGGGCGATGTTTCCCGTGGAGCAGGTGATGACGAACCCGGTCGCGG
CCGCGATCGCGGCGTGCCAGCCGACCACCACCGTTACCGTCGGCGTCCCG
AACAACATGATCGGGGCCATCCTGGGGCCCGGGGGCGCCATCATCAGCGA
GCTCCAGTCGCTGAGCGGGGCGAGGATAAATGTGAGCCAGAGGGATGCTT
TCATGCCAGGCACGGAGAACCGCATCCTCACCATCACCGGAGCTCCGATG
GCGACTCAGACCGCGCAGTACCTGGTTTCCCAGAAGATCGAAGCGTTCGT
GGAGAGACCAAGAGGGTGGTAG
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