mRNA_P-littoralis_Contig60.100.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig60.100.1
Unique NamemRNA_P-littoralis_Contig60.100.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig60.100.1 vs. uniprot
Match: A0A6H5KJ37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ37_9PHAE)

HSP 1 Score: 549 bits (1414), Expect = 2.050e-182
Identity = 302/484 (62.40%), Postives = 338/484 (69.83%), Query Frame = 1
Query:   46 MVVRSTPCRRSALVPLILCFSFQGAPALGGLEAFLQSPPI-FCGETPIRRPSKRTSSSTRRDLWIACGSDDGWKLRSSPGSTDESS-GEEIED-DGSSSSLPDTIGQNAPLGVPAEKWARVLQSARDKKTEDDRLSPSPQHKPSHVAAVTLQALRRNDEPYPNFGCEIAIRFSSASNPASDFTPGGMRTYIDDPSMPFYRILGDWDEMGPVEDAEIDAAETGKANQQIRVKQGGDSEWSTVSMDFVREGGCWLIERLWIDDKSVAGGGRAGKGDESLP--PPRLSVAELFDEDRLEVMSCKYADYDPASLLTAGG-DWLEERPNPSLSPKAVALTCIISLRQNNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLPLNQGCERVIRFCSPNNVASTLTPAHFAQYLNEPWYAIFKEWDELSFHSEDISDDGGTADLVVLLRPEHEEAWTSVNWELVLCDGMWLTERIWVVDV 1479
            MV ++T  R   L PL +  +           AF+QSP     G + +RR      SS+    W         +LRSS G+  ES+ GE+ ED D S  S PDT+G++AP+GV  EKW RVL+SAR    E   LSP+P+H PSHVAAVTLQALRR D PY NFGCEIAIRFSS SNPAS FTPGGMRTYIDDPSMPFYR+L DWDEM PV  AEID AE  +ANQQ+RV++ GD  WSTVS+D V+E GCWLIERLWIDD+SVAGG RAG G E+ P  P  LSVAELFDEDRLE+MSCKYADYD A L  AGG DWLEERPNPSLSPKAVALTCI+SLRQN+D                                        K  LN+GCERVIRFCSP NVASTLTPAHFAQYL EPWYAIF +WDELSFHSEDIS+D  TADLVVLLRP++EEAWTSVNWELV CDGMWLTERIWVVDV
Sbjct:    1 MVPKTTRRRSLTLAPLSIYLTL--------CAAFVQSPSFRLRGNSIVRRRRASCCSSSGSGCW---------ELRSSLGANGESNVGEDSEDEDASIYSFPDTLGESAPVGVSPEKWERVLRSAR----ETTLLSPNPEHPPSHVAAVTLQALRRTDVPYTNFGCEIAIRFSSTSNPASGFTPGGMRTYIDDPSMPFYRVLSDWDEMAPVGGAEIDVAEPDRANQQVRVRKEGDPAWSTVSLDLVKEDGCWLIERLWIDDRSVAGG-RAGGGREASPXXPAPLSVAELFDEDRLEMMSCKYADYDSACLAAAGGGDWLEERPNPSLSPKAVALTCILSLRQNDDGSGSDAATDDSRRDGEAAGGDAAATAGAGAKA-------TKPRLNEGCERVIRFCSPTNVASTLTPAHFAQYLKEPWYAIFNKWDELSFHSEDISEDESTADLVVLLRPDNEEAWTSVNWELVKCDGMWLTERIWVVDV 455          
BLAST of mRNA_P-littoralis_Contig60.100.1 vs. uniprot
Match: D8LGZ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ2_ECTSI)

HSP 1 Score: 401 bits (1031), Expect = 4.220e-128
Identity = 218/298 (73.15%), Postives = 235/298 (78.86%), Query Frame = 1
Query:  595 MRTYIDDPSMPFYRILGDWDEMGPVEDAEIDAAETGKANQQIRVKQGGDSEWSTVSMDFVREGGCWLIERLWIDDKSVAGGGRAGKGDESLPPPR--LSVAELFDEDRLEVMSCKYADYDPASLLT-AGGDWLEERPNPSLSPKAVALTCIISLRQNNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLPLNQGCERVIRFCSPNNVASTLTPAHFAQYLNEPWYAIFKEWDELSFHSEDISDDGGTADLVVLLRPEHEEAWTSVNWELVLCDGMWLTERIWVVDV 1479
            MRTYIDDPSMPFYR+L DWDEM PV  AEID A+  +ANQQ+RV++ GD  WSTVSMDFV+E GCWLIERLWIDDKSVAGG R+G            LSVAELFDEDRLE+MSCKYADYDPA L    GG+WLEERPNPSLSPKAVALTCI+SLRQN+D          XXXXXXXXXXXXXX                K  LN+GCERVIRFCSP NVASTLTPAHFAQYL EPWYAIF +WDELSFHSEDIS+D  TADLVVLLRP++EEAWTSVNWELV CDGMWLTERIWVVDV
Sbjct:    1 MRTYIDDPSMPFYRVLSDWDEMAPVGGAEIDVADPARANQQVRVRKEGDPAWSTVSMDFVKEDGCWLIERLWIDDKSVAGG-RSGXXXXXXXXXXAPLSVAELFDEDRLEMMSCKYADYDPACLAAEGGGEWLEERPNPSLSPKAVALTCILSLRQNDDGSGSDAATDDXXXXXXXXXXXXXXGATTGAGAKA-----TKPRLNEGCERVIRFCSPTNVASTLTPAHFAQYLKEPWYAIFNQWDELSFHSEDISEDESTADLVVLLRPDNEEAWTSVNWELVKCDGMWLTERIWVVDV 292          
BLAST of mRNA_P-littoralis_Contig60.100.1 vs. uniprot
Match: A0A836CF69_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF69_9STRA)

HSP 1 Score: 231 bits (590), Expect = 2.970e-65
Identity = 129/318 (40.57%), Postives = 163/318 (51.26%), Query Frame = 1
Query:  595 MRTYIDDPSMPFYRILGDWDEM-----GPVEDAEIDAAETG--------------KANQQIRVKQGGDSEWSTVSMDFVREGGCWLIERLWIDDKSVAGGGRAGKG----DESLPPPRLSVAELFDEDRLEVMSCKYADYDPASLLTAGGDWLEERPNPSLSPKAVALTCIISLRQNNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLPLNQGCERVIRFCSPNNVASTLTPAHFAQYLNEPWYAIFKEWDELSFHSEDISDDGGTADLVVLLRPEHEEAWTSVNWELVLCDGMWLTERIWVVDV 1479
            MR Y+ DP++PFYRIL +WDEM     G    A ID   T                A Q + V++ GDS WSTV++   RE GCWLI+RLW+DD+SV    RA  G                 +  +   E M C++ DYDP  L++    WLE+ P+  LSPK V L C+ +LR  +                                             N GC   IRFCSPNN ASTLTPAHFA YL EPWY I  +W E++FHSE+++ DG  ADLVVLL+ + +  WTS+NW L   DG+WLTERIWV DV
Sbjct:    1 MRRYLSDPALPFYRILAEWDEMDTRGGGLSLSASIDPTSTSTSTNGDAPTADAADSAYQAVLVRRTGDSTWSTVNLQMSREHGCWLIDRLWVDDQSVDPSARAAGGAVXXXXXXXXXXXXXXXMLADAANEAMGCRFGDYDPVQLVS----WLEQDPSEELSPKMVVLNCLCALRAKDIPHR-----------------------------------------NAGCALTIRFCSPNNAASTLTPAHFAAYLEEPWYQIIAQWSEMAFHSEEMNADGSEADLVVLLKRQGDAEWTSMNWLLGRYDGLWLTERIWVDDV 273          
BLAST of mRNA_P-littoralis_Contig60.100.1 vs. uniprot
Match: A0A7S2XYB1_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYB1_9STRA)

HSP 1 Score: 156 bits (394), Expect = 4.200e-37
Identity = 118/428 (27.57%), Postives = 176/428 (41.12%), Query Frame = 1
Query:  364 PLGVPAEKWARVLQSARDKKTEDDRLSPSPQHKPSHVAAVTLQALRRNDEPYPNFGCEIAIRFSSASNPASDFTPGGMRTYIDDPSMPFYRILGDWDEMGPVEDAEIDAAETGK-------ANQQIRVKQGGDSEWSTVSMDFVREGGCWLIERLW----IDDKSVAGGGRAGKGDESLPPPRLSVAELFDEDR--------LEVMSCKYADYD-------PASLLT---------AGGDWLEERPNPSLSPKAVALTCIISLR------------------QNNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLPLNQGCERVIRFCSPNNVASTLTPAHFAQYLNEPWYAIFKEWDELSFHSEDISDDGGTAD------LVVLLRPEHEEAWTSVNWELVLCDGMWLTERIWV 1470
            P G+  E W R+ ++A+ K  +     PS    P  VA + L+ALR N     + GC++AIRF S+ NPAS+  P  +  Y+ D  MP Y I+ +W+++    D +    E  +         QQ+ V++ G+  WS V+ +FVRE   WLI++LW    I+  S   G + GK   S PPPR    +     R        L   + + A          P+S LT          GG  +E     S S         + +R                  Q N                                         +   N GC+  I F +P N A  + P HF  YL EPWY+  +EWD++    E    +GG  +      + V L+ ++E+  TS NWE+VLCDG W+  ++WV
Sbjct:   16 PSGMKQEDWDRISRNAKAKWKKFQAEQPSSTQTPREVAVIVLKALRNNHYSDQHQGCQVAIRFCSSENPASEMMPEDLAAYLADDRMP-YAIMCEWEDIDASADGDCSEVENMRRVPDGTQCQQQVFVRRLGEKGWSAVNFEFVRENSEWLIKQLWVNTDINSTSQQDGAQEGKARRSSPPPREGRQKPKKNQRRTQPPDFRLNTAAVRGAGAGALAIPPAPSSPLTQEKTGKEAAVGGGEVEWGRTSSSSSSLEQSMLALGMRPAXXXXXXXTGTQTGGPLQWNPAFAEEMRSTDLMLLCPPEGGSPWTAVSNILLALRAVDTCGR---NWGCQVAINFAAPTNPARDMDPEHFRSYLQEPWYSYLQEWDQMELEDEGQVVEGGGPNGQPIVHIEVSLKKQNEDHATS-NWEMVLCDGKWMVAKVWV 438          
BLAST of mRNA_P-littoralis_Contig60.100.1 vs. uniprot
Match: A0A7S0JKP0_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JKP0_9EUKA)

HSP 1 Score: 84.0 bits (206), Expect = 1.430e-15
Identity = 42/109 (38.53%), Postives = 55/109 (50.46%), Query Frame = 1
Query: 1201 GCERVIRFCSPNNVASTLTPAHFAQYLNEPWYAIFKEWDELSFHSED-----------------ISDDGGTADLVVLLRPEHEEAWTSVNWELVLCDGMWLTERIWVVD 1476
            G E  IRFCSP N AS L+P  FAQYL EPWY I  EWDE+     D                   D+    +  VL++   +E+WT VNW+L    G WLT+ + + +
Sbjct:    3 GAEVAIRFCSPTNAASRLSPRGFAQYLREPWYRILTEWDEMVLDDGDEXXXXXXXXXXXXXXXXXXDESTVVEQSVLVKRTVDESWTVVNWQLSRHSGRWLTDALTITE 111          
BLAST of mRNA_P-littoralis_Contig60.100.1 vs. uniprot
Match: A0A7S0JII3_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JII3_9EUKA)

HSP 1 Score: 80.9 bits (198), Expect = 9.170e-14
Identity = 39/99 (39.39%), Postives = 54/99 (54.55%), Query Frame = 1
Query: 1201 GCERVIRFCSPNNVASTLTPAHFAQYLNEPWYAIFKEWDELSFHSEDISDDGGTA-----------DLVVLLRPEHEEAWTSVNWELVLCDGMWLTERI 1464
            G E  +R+CSP N AS L+P  FA YL EPWY I   WDEL    ++   +   A           D+ VL+R   +++WT VNW+L   +G WLT+ +
Sbjct:   73 GAEVAVRYCSPTNKASLLSPQVFAAYLKEPWYEILTAWDELDMDEDEDDVEANLAERWEQLRTSLADIDVLVRVRGDDSWTVVNWKLSRHNGRWLTDAL 171          
BLAST of mRNA_P-littoralis_Contig60.100.1 vs. uniprot
Match: A0A8J5XX53_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XX53_DIALT)

HSP 1 Score: 80.1 bits (196), Expect = 9.750e-14
Identity = 49/156 (31.41%), Postives = 82/156 (52.56%), Query Frame = 1
Query:  340 PDTIGQNAPLGVPAEKWARVLQSARDKKTEDDRLSPSPQHKPSHVAAVTLQALRRNDEPYPNFGCEIAIRFSSASNPASDFTPGGMRTYIDDPSMPFYRILGDWDEMGPVEDAEIDAAETGKANQQIRVKQGGDSEWSTVSMDFVREGGCWLIERL 807
            P + G +AP     ++W    + A+    E   + PS    P  V  + L ALRR DEPY ++G ++AI  S+ SN AS  +P     Y+ + S   Y I  +WDEM   ++ +I AA+  +A Q++ V++  D+ W+ ++   V+  G W+ E +
Sbjct:    6 PWSSGSSAP-----KRWTATDEPAQALPAE---VLPSTARSPRDVIMLVLNALRRPDEPYDDYGPQLAIAHSAPSNGASQLSPVQFAKYLSEES---YVIFSEWDEMEIEDELQI-AADGQRAYQEVLVRRANDASWTHINWTLVKHAGMWMTESV 149          
BLAST of mRNA_P-littoralis_Contig60.100.1 vs. uniprot
Match: A0A7S2NRG0_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2NRG0_9EUKA)

HSP 1 Score: 85.1 bits (209), Expect = 1.840e-13
Identity = 44/101 (43.56%), Postives = 56/101 (55.45%), Query Frame = 1
Query: 1201 GCERVIRFCSPNNVASTLTPAHFAQYLNEPWYAIFKEWDELSFHSEDISDDG-------------GTADLVVLLRPEHEEAWTSVNWELVLCDGMWLTERI 1464
            G E  +RFCSP N AS L+P  FA YLNEPWYAI  EWDE+    +D  +D                A++  L+R + E  WT VNWEL   +G WLT+ +
Sbjct:  337 GAEVAVRFCSPTNKASQLSPQAFATYLNEPWYAILTEWDEMQIDEDDEEEDVEAALARRWDELRLNVAEVGTLVRRKGEP-WTVVNWELSRHNGRWLTDSL 436          
BLAST of mRNA_P-littoralis_Contig60.100.1 vs. uniprot
Match: A0A7S0EJH6_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EJH6_9EUKA)

HSP 1 Score: 74.7 bits (182), Expect = 7.190e-12
Identity = 35/96 (36.46%), Postives = 56/96 (58.33%), Query Frame = 1
Query: 1192 LNQGCERVIRFCSPNNVASTLTPAHFAQYLNEPWYAIFKEWDELSFHSE-DISDDGGTADLVVLLRPEHEEAWTSVNWELVLCDGMWLTERIWVVD 1476
            LN G    +R+CSP N AS+LTP  F  YL EPWY +  EW+E+    E DI   G TA++ V  R + +++++ V++ L   +  WL + + + +
Sbjct:   56 LNHGAALSVRYCSPTNGASSLTPEAFKGYLREPWYKLLLEWNEMELDDEEDIDSAGNTAEVDVQCRRDADDSFSIVSFRLSRHNARWLIDSLTITE 151          
BLAST of mRNA_P-littoralis_Contig60.100.1 vs. uniprot
Match: A0A7S3WL35_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WL35_EMIHU)

HSP 1 Score: 72.4 bits (176), Expect = 1.150e-11
Identity = 37/95 (38.95%), Postives = 55/95 (57.89%), Query Frame = 1
Query: 1195 NQGCERVIRFCSPNNVASTLTPAHFAQYLNEPWYAIFKEWDELSFHS--EDISDDGGTADLVVLLRPEHEEAWTSVNWELVLCDGMWLTERIWVV 1473
            + G     + CSP N AS L+PA FA YL +PWYAI  EWDE+ F    E+     G A++ VL+R   +E+++ V+W +   D  WL + + +V
Sbjct:    5 HHGAVVATQHCSPRNRASELSPAVFAGYLQDPWYAILAEWDEMEFDDDEEEAETAVGEAEVQVLVRRGGDESFSMVSWLMSQHDERWLIDSLNIV 99          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig60.100.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5KJ37_9PHAE2.050e-18262.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGZ2_ECTSI4.220e-12873.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CF69_9STRA2.970e-6540.57Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2XYB1_9STRA4.200e-3727.57Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A7S0JKP0_9EUKA1.430e-1538.53Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S0JII3_9EUKA9.170e-1439.39Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A8J5XX53_DIALT9.750e-1431.41Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A7S2NRG0_9EUKA1.840e-1343.56Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7S0EJH6_9EUKA7.190e-1236.46Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S3WL35_EMIHU1.150e-1138.95Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig60contigP-littoralis_Contig60:436714..445848 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size3324
Hectar predicted targeting categorysignal peptide
Exons10
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-14_001380.1
Cds size1437
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig60.100.1prot_P-littoralis_Contig60.100.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig60 436759..443950 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791250.7333066-UTR-P-littoralis_Contig60:436713..4367581680791250.7333066-UTR-P-littoralis_Contig60:436713..436758Pylaiella littoralis U1_48UTRP-littoralis_Contig60 436714..436758 +
1680791250.851564-UTR-P-littoralis_Contig60:443950..4447731680791250.851564-UTR-P-littoralis_Contig60:443950..444773Pylaiella littoralis U1_48UTRP-littoralis_Contig60 443951..444773 +
1680791250.8617911-UTR-P-littoralis_Contig60:444829..4458481680791250.8617911-UTR-P-littoralis_Contig60:444829..445848Pylaiella littoralis U1_48UTRP-littoralis_Contig60 444830..445848 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791250.7499847-CDS-P-littoralis_Contig60:436758..4370561680791250.7499847-CDS-P-littoralis_Contig60:436758..437056Pylaiella littoralis U1_48CDSP-littoralis_Contig60 436759..437056 +
1680791250.7622535-CDS-P-littoralis_Contig60:439217..4393661680791250.7622535-CDS-P-littoralis_Contig60:439217..439366Pylaiella littoralis U1_48CDSP-littoralis_Contig60 439218..439366 +
1680791250.774365-CDS-P-littoralis_Contig60:439861..4399891680791250.774365-CDS-P-littoralis_Contig60:439861..439989Pylaiella littoralis U1_48CDSP-littoralis_Contig60 439862..439989 +
1680791250.7859485-CDS-P-littoralis_Contig60:440616..4407131680791250.7859485-CDS-P-littoralis_Contig60:440616..440713Pylaiella littoralis U1_48CDSP-littoralis_Contig60 440617..440713 +
1680791250.7956007-CDS-P-littoralis_Contig60:441137..4412301680791250.7956007-CDS-P-littoralis_Contig60:441137..441230Pylaiella littoralis U1_48CDSP-littoralis_Contig60 441138..441230 +
1680791250.8051233-CDS-P-littoralis_Contig60:441566..4417761680791250.8051233-CDS-P-littoralis_Contig60:441566..441776Pylaiella littoralis U1_48CDSP-littoralis_Contig60 441567..441776 +
1680791250.8191803-CDS-P-littoralis_Contig60:442135..4423901680791250.8191803-CDS-P-littoralis_Contig60:442135..442390Pylaiella littoralis U1_48CDSP-littoralis_Contig60 442136..442390 +
1680791250.8292642-CDS-P-littoralis_Contig60:442770..4428691680791250.8292642-CDS-P-littoralis_Contig60:442770..442869Pylaiella littoralis U1_48CDSP-littoralis_Contig60 442771..442869 +
1680791250.8415666-CDS-P-littoralis_Contig60:443842..4439501680791250.8415666-CDS-P-littoralis_Contig60:443842..443950Pylaiella littoralis U1_48CDSP-littoralis_Contig60 443843..443950 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig60.100.1

>prot_P-littoralis_Contig60.100.1 ID=prot_P-littoralis_Contig60.100.1|Name=mRNA_P-littoralis_Contig60.100.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=479bp
MVVRSTPCRRSALVPLILCFSFQGAPALGGLEAFLQSPPIFCGETPIRRP
SKRTSSSTRRDLWIACGSDDGWKLRSSPGSTDESSGEEIEDDGSSSSLPD
TIGQNAPLGVPAEKWARVLQSARDKKTEDDRLSPSPQHKPSHVAAVTLQA
LRRNDEPYPNFGCEIAIRFSSASNPASDFTPGGMRTYIDDPSMPFYRILG
DWDEMGPVEDAEIDAAETGKANQQIRVKQGGDSEWSTVSMDFVREGGCWL
IERLWIDDKSVAGGGRAGKGDESLPPPRLSVAELFDEDRLEVMSCKYADY
DPASLLTAGGDWLEERPNPSLSPKAVALTCIISLRQNNDGSSSPDSTSSS
IGDDEDGDTSRGNGAAPPPSSAAAAAAAAKLPLNQGCERVIRFCSPNNVA
STLTPAHFAQYLNEPWYAIFKEWDELSFHSEDISDDGGTADLVVLLRPEH
EEAWTSVNWELVLCDGMWLTERIWVVDV*
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mRNA from alignment at P-littoralis_Contig60:436714..445848+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig60.100.1 ID=mRNA_P-littoralis_Contig60.100.1|Name=mRNA_P-littoralis_Contig60.100.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9135bp|location=Sequence derived from alignment at P-littoralis_Contig60:436714..445848+ (Pylaiella littoralis U1_48)
CTGGTCGCTGGTCATGTGGTGCTCTCTTTCCGTAAGAGAGGTGTGATGGT CGTACGTTCCACGCCATGTAGGAGGTCTGCACTGGTGCCCCTGATCTTAT GCTTCAGTTTCCAGGGTGCACCAGCTCTAGGTGGTTTGGAAGCCTTTTTA CAATCGCCGCCTATATTTTGCGGGGAAACTCCAATTCGTAGACCTTCTAA AAGGACCAGCAGCAGCACCAGGAGAGACCTGTGGATTGCTTGTGGCAGTG ATGATGGTTGGAAACTGCGCTCATCCCCAGGATCGACCGACGAGAGCTCA GGGGAGGAGATTGAAGATGATGGTAGCAGTAGCTCTCTCCCAGGTGCGAG CGGTCGATAGGTGATGTCTGTGGTCTTCGCGTCTTTGACGATGAGTCCTG GATTATGTACTCATGCTGATATCAACCAAACGCAATATTTTGTGTCGTGT CGTCGTATTACATGTATTATTACCGTAAATCATGCGAGTCATCGCACCCC CGTGTTAGCTTTTTTGCATTCCGTATTGCTCCATAACCAGGAGAGTGCGG ACACCAAACGACCTGTCATACGAAAGCTCTCGACGAGATCTTTCCAAAAC CACCCTATTCGGCTGGTACTCTCCTGGTTGTGGAGCAATACGGAATGCGA AAAAGCTAACACGGGGGTGCGATGACTCGCATGATTACATTATACCCGTA CTGCTGTACCTTGTGCTTGAAGTTTGGAACATTCACTTGTGTGTGTGGGT GAGTTGGTAGGTGTGGGTGCGTGTGTGTTGCCATCCCGTCTGTTCTGAAC GCCTGCCTGTCTACCCCTTTGGTAAAGGTTGGGCGCACCAGCCGGGGTCA CACAGGAGCAAGAGGTCAACCCACGGGTGCTTTCCTCTATTTTCTTGTCT CGAGAAAGATTCGACCGTCCCGTTTATCCGTCGTCGACTCTTTTCCGGTG GATATTTTTGCGTTTGTGTTTGCTTTCGTCCCATTACTTGTTGGGCAGTG GCCAACAAAGGGTATACCCGGTGGTTTTGTGGCCACTATCGGGTACCCTT CTTTTCCGCCGATAGAAATGGTCTCAGGGAGCAATCCCATTGGCCAAATC GCGCCGCCACCCGGTCCTGGCCTAATTTCTGCCAGGTATACCCGGTTTTG GCTACTTTCCCCGCGTGAGCTACCCGATTTTCACATACACTACCCGAAAG TGGCCCGACACACACTCCGTAACAAAATTATATTTCATTTTTACACTTCT GCTTCTGTAGGTCATTTGTACTTCGTATCATATTGTGCTGCCATATCCCG TCATATATCTCCTCTCTGTCACACACCACACACACACACATGCACGCAAA CTCACACACACGCACGCGCTCATGACACAACCATCAGATAAACTCAGATG CATTGGTACAGCGGGGACGAAGCTCATGGCAAATGGGGGCTTTTGCCTGT TGTTGTTCGGATCCAATGAAGTGGACTAACTCTTTGAAGAATTGAAGTAT TCGTTATAGAGTGTGCGTCGGGCTACTTTCGGGTAGTGTATGTGAAAATT CGGTAGTTCCCGCGGGGAATGTAGCCAAAACTGGGTATACCTGGCAGAAA TTAGGCTAGGACCGGGTGGCGGCGCGGTTTGGCCAATGAGATTGCTCCTT GAGACCATTTCTATCGGCGGAAAAGAAGGGTACCCGACAGTAGCCACAAA ACCACCGGGTATACCCGTTTTTGGCCATTCCTCAAAGAAAAATATCGAAA ACTAAAACAGAAACGTCGGGCGTGAAGCTCTGTTGGAGATATCGTTCGTC TTCTTGAGCCTGGCGTTGTTGTTTGTTTCACCATGGGGGCTGCACCGCTT TTGCCTTCAAATGTGAGTACTGTCAACAACACTGGTCGGTCAACTCTTGA TCGCTGCACAGGGGCCCCCTGGGTCTTCTTCCAGGAGGTGGCGAACACCC CAGCGGCCAATGTCTTTCAAGCACCTACAGCAGTATGATTTAATATGCTT GCAGGAACTTTTTGACACATTTTTTCTATTCATGAGCGGACTCTCCGCCG AGGAATGAAGCCACCCGCTTTTCGAGGACAGAGAAAACTGACCATCGTGC CGTCGCTCAAGGGGCGATACCGCCGCTCTTCTGCGAAATCCGCAGTCTTC CTGCGGCGTAATCCCCGCGAAAACAGGGCACCGACATGTGTTGAGAACTA GTTGTCATGAGTCCCATTGGGTTTGCATCAATCACATGATGCTCTCCGGT AGTTTAAACACAGCTGAAAGAACGTAGGTCCTCCTTTCTCGGGCCCACAA TTGCAGTTCCCCGACACGTGCAAACGCTTGCCCCGCTTTGAAATGTACAG AAGCGGCTGCAGCAACGGTACAAATAAAATGGAAGCTGGGTGTATGCCAC ATGTTGGCGCTCTGCTGCCTGCACGAAGGATGCGCGTGTTGTGATGACAA TCCATCATGTGATGGCCTCCCGTTCTGCTACGACCTTCATGTTACTGTCG TCAGACACGATCGGGCAGAACGCCCCGTTGGGTGTGCCCGCTGAGAAGTG GGCGCGCGTTCTACAATCGGCTCGAGATAAGAAGACTGAGGACGACCGCC TTTCGCCGAGCCCCCAGCACAAACCGAGCCACGTTGCTGCCGTCACGCTA CAGGTGAGATTTACGACCCCGCTTGCCTCAATTGGTGGTGGTGTATGAAC AGTTGCTGTATGTTGTGCACCATCATTGCCACTGTCTGCTGTTCGCTCTC TCTCTCTCTCTCTCTCTCTGTCCCTTCTGCACACGGACGAACATGCGGTA GGTGTCGAACTTTGATAAAGTGAAAATTATCAGGCGGAGTTTTTCTTTTT GTTCCATGAAGCACTGCAGTGCATCATTTGTCTGCCCTGTGTATCTGCGC AGTGCGACAACAGTGGCCGGGAGCGGCCGTGGCGGTTCGTTTGCTCCCTT CTGCGGCACACCCTCACCATACCACCATCCATGTCATAAGAAGTTGCGGC CCCCTCCGGCTACCACGCGTCATGGTGCCTGCCTCTTTTGCACGGTCTCG CCGTCTCCCTCGGTCACGCCCCTCGTGCTTTCATCACACAAATACGTTAC AGTAGTTTACAAGCATGCTGTTCGACGGTCCCACCTTTTCAATGACAGGC CCTCAGACGGAACGATGAGCCATACCCGAACTTCGGGTGCGAAATCGCGA TCCGGTTCTCCAGCGCATCAAACCCGGCATCGGATTTCACCCCAGGGGGT ATGCGCACGTACATCGATGACCCAAGGTTCGATTGATTGCCGTCTTTTTT AAGCCGTGGAGAGCGCACATGGCTCTTCGGTGGGGAACGACCGTCGTGCA TGGGCTACTGCTTTCTCCGGGCACTTACATGATGTTTTTCAAGTTGTTGT TGTTGTTGTGTCGTCGGGTGCGATACGCTCGAAGGCGACTTCTTTTTCGA CGAATGCATGCGTGCTTCGAACGTACGTTCGTTGCATTCGTTTATTATGC GCAAGTGTACGCTTGAACAATCATCGCTTGGTTGTGGGTGTTCAAACTAT TAACTTTCCGCGCTTGAATTGTTGTTGGGGATTCTACATTGTTCCTTCAT TTACTAGGTTCGGTGCCGGGGCCCGCTGTAGTTGGTACTACGCTTACCGA GGTGTGCCCGCGGCGAGCCGCGATATTACACGCGGGGTTTCGGCTTTTGT ATTTTTGCCTTCCTTTGAGCAATGCAATCGTAACAGCAGCCAATCCATGA TAAACCAGCTTGTTTTGTATTGTCGTTAACCTCTGTCGGCGTGTTACATG TTTCACCCTGGTGCCTTCTTTTGTGTGTGTGGCACCACGTCGCATGCGGA CTTTCGTCTCCTCCCTTGCCACCCTTCGGCAAATCGAATCACCGAATCAT CAGCATGCCGTTCTATCGGATTCTAGGCGATTGGGATGAGATGGGACCGG TGGAAGATGCCGAGATAGACGCCGCGGAGACCGGCAAGGCTAACCAGCAG GTACAGTCTCTCGCTCTCTCTGCCTCCCGTCTCTCTCTGTCTCTCTCGCT CTCTTCGCTTTCTCCTTTCTTCCCTCCCTTCCTACCTCTCTCCCTCCCTT CCTTGCGAATAGTTCAGTATTTCAAATGTTTTTTTTTTACTAATTTCTCA CGGTGCAATCGGACAGCCGGGCTCTTATCACCGTGGTGACGAGCTGTTGG TATGCCACAGAGGAATTACTGAAATGTAGGCGTAGGGAGGCAGCAGACCG TCACATGAACTGAACGGACTGGTGCCTGGCCACCCTGTGTATTTACTTTG CTAGAATTATGTGCCGTGCGCCTTGAGACATTTACGCTTCCCACCACTCC CCCTCCCCCCGTCGCCGCCGCTGCTGCCGTCTGTGCCCCCCCTTCGCTCG GCGGCCGACTGTCATGATTCATAGATTCGCGTGAAACAAGGAGGAGACTC GGAGTGGAGCACGGTGTCCATGGATTTTGTGAGGGAAGGAGGCTGCTGGC TCATCGAGCGGCTTTGGGTAAAGTTTACCGTCTGTATTCGGATCCTGCCA GGGTGTATCTTTGTACTTCGGAACCAAGGACGATATGGCTATACCCTACC GCTTAAGTTTGTTGATTGTTGGTCTATGATCCCCCGAACCGATTTTTAAT CCTACTTCCATGCTCTGTCTGTACAGCAGAGCGCAGACTGTATTCATACA TGTGCGCGGATTAAGGACTCCGTGCACCACCAAATTACCATGTTCGTTTT GAAAAGCAGCGCCGTCGCCATCGCTGCCGCCGCACGCACCCTTTCAAGTT ACCCCCCAACCCCCCCCGCCCACTGCACGATTGTTCGTGCGACATTAACA AAGATTGACGACAAGAGCGTTGCTGGCGGCGGGCGAGCCGGGAAAGGGGA CGAATCGCTCCCGCCACCCAGGCTTTCCGTGGCGGAGCTTTTCGACGAGG ACAGGCTTGAGGTGATGTCGTGCAAGTACGCCGACTACGACCCGGCTTCC CTCTTGACGGCGGGGGGGGACTGGCTCGAGGAGCGCCCGAACCCTTCTTT GTCTCCGAAGGCGGTGAGAAGCTATCTCTTAATTTTTTTCTAGCTGTATC GTCGCAGCCTTGCTCGGCGCGACTCGCGGAATCAGTTGCTGGTAGTTCGT TGCACGCAATGTAGTCGTGTGTGTCTGGGGTTCACGTCGAGATAGTGCGT GGATGTATGCTTCATTCATTGCGTGCGCACGCTTTGTGCATTATGGCCGG TTCAACACGCCCCCAACTATGACATATTTTTTGTTACCGTATGCTGTGTG TAAGGTCCGCTGCACACAGCAGCGCTTTCCCACTAGGCGAAAGTGCCTCC GAACCAAGCTCTCAAAAGGTCGACTGGCATTGGAAGTTTAATCGTCGAAC ACACATGTGTGTGTGCATACAGGTGGCTTTGACGTGCATCATTTCGCTAC GGCAAAACAACGACGGCAGCAGCAGCCCTGATAGCACAAGCAGCAGTATT GGCGATGACGAAGACGGGGACACATCACGCGGTAACGGTGCAGCTCCTCC GCCTAGTTCGGCGGCGGCGGCGGCGGCGGCGGCAAAACTGCCGTTAAACC AGGGCTGCGAGCGCGTGATTCGGTTTTGCTCGCCCAACAACGTCGCAAGT ACGCTCACGCCGGCACACTTTGCACAGGTATGGGCAACATTAGCGAGACA GCAGCAGTATCTGGTCTGAAGCAATGAGCAGCGTGCGTATGGGGGGAGCA CGAAAATAATCGGAAGGAAAGGGGAAGGGATGGGAAGAGCCAGGATGAAA AAGGCGGGTGCCGTAGGATTTCGCATGGTGGCAAGAGGAGCATCGACCGA GATTGTCGACCTGTCAGGCGGCGGGCAAACGGCGATTGACGACGAGACCA CACTCCTGCCTCACGTGGAGTACAAGGCGAGGAGCAAGAAGCGTGAGGAA GAGTTTTTTTACACTTTTTGGTCATGCCGCCTGGCTGTCTGACCCTCTCA ACCAAAACTGCTTCTCATCCCGTGTTGTTTGTTCATCTTTTTGTTTCGCA ACCCAAGTATCTGAACGAGCCGTGGTACGCCATCTTCAAGGAGTGGGACG AGCTTTCGTTTCACAGCGAGGACATCTCCGACGATGGCGGCACCGCAGAT CTTGTGGTGAGCGCATGGGGGGGGGATATCTTTCGGGTTTGCACTCCTAC ATATCCGGCGATGAGGGGCTGGACGACGAAGAAGAGCTGACGTATTGACG CCCCTCACCCTGCTGTGGTACCTTTTGCTGGCCACTACGGCTGCCATTTG AGGCCGGGCAGTTTCACCAGTCAAATGAACCTTCGTTTTTCCAACTAAAA GCTCTCGACTTCTTGTCCCTCGTACGGTACGGAATCTGATTAAACCCCAC ATTTTACGGGCGTGTAGGTTGTCATGGCATCTGTACTCGTTTCTCGACGC CAGTGTACACTTTTCGCTAAAAGTCGGGCGTATCAGCCGAGGTCACACAG GAGGAAGGTCGCCTGACAACCATGCCTTGAGTTTTGTTTTCTCCCACCTT CCTTCTGCCACGCTAGCCTCAACATTTCATCTCGAGAAGAAGTTTGGCCA TCTCCCCCTTTCCCTGGTCAGCTTTGGGGTGTAGGCGAGTTTGGTCTACT CACGAATAATCCCCCTTGCGCTGCTACGTATGGCGTTGAGAAAGAGCTCC AGTGCACCGACGAGTTCCGAGCTCATGACCCAGCCGTCAGAGGGCACCGA GAGATGAACTAAACTGAACCACCCGGGGCGGTCGGAGGTATCTGTGTGTT TGGCCAAAAGAGGCGTAAAGGTCTGAAGAAGTTGTGTAACTTTTCAGCGA TGTCTCATGAAGATCAAAACATTATGTGTGTCCGCTGTGTGAAGGACGCG GGCAATGAGTGGTCCAAGTACCCAGTAAAGCGACATACGTACCCCCTTCC GTACATGCCGGGGCAAGACAAACAAGAGATTCTTGACGAGAAATCTTCTT CGCAAGAAATTCACGGACGGTGCTGCGTCTGGATGCCTGGTCAATCGGCA AATAAATAAGGCAGGCAAAAAATTAGTACACTGAAATATCACCCCGCCCC CCTCGCCACGCACACGCTCTCAACCCAAGGTTCTGCTACGCCCCGAGCAT GAAGAGGCGTGGACCTCGGTGAACTGGGAGTTGGTATTGTGCGATGGCAT GTGGCTCACGGAGAGAATTTGGGTAGTAGATGTGTGAGAGCTCCTTGGCG GCGGGTGGCAGGTTTTACCGGGAGTGATGGCGGCGATGGCCGTTTCATTT CATTGTCCCTGGCGACACTTTAGTTGATCCCAGCGAGGAATGTGTTGGCA GTGCGTTTGTTTGTGTTTTGATGCATGTTTCGTGCGGGTGTTGTACTGAC GGTGATGCAGGTATATTCCCTGGCTTCTGGGTGGACTACTGCTGTAGAAC ACACGGGAACGCATACTTCTGCGTGTATATATCATACCTGGAATGTATGT AGTGTGTGTGCGTATTATTTGGTGGATGTGCAGCAGCCACAAGCTAGGTA TGCAGGCGAACAGACAGAGCAAGAATTCATATGATATCATAGCTCACTGC TCTCGTGCGTACTTATATTTATCCATGTGTACAAATGTACATTTCTGCGA TCACTACAATGACACGACTCTCATCTGCATTGCAAGGTAGCAGGGGGGTG TTTGGTTCTGGTTCCCCGAACCATGAAAACAAGGAATGGGTTGGGGGGAG GGGGTAAAGGCTCAACGAGTGGGAGTATTTTGCACCTGCACGCGCTGCCA CTGTGTGACCATGGGGAGCGTCCCTTCCTGGATGATTCGGCAGTAGCATG GATATCGGAAGGCGCTGAGAAGAGATCGGAACTGTTTTTGTTGTGAACGC AACACGTGCGCTGCTACTGCCATTCGTTGTCTGTATCGGCTACTACAGCA GCGCTTGCTCGACATGAGCCTTCTCTGCTGCCCCGATGACATTGCTGCTG CACGCCCATGCCATTTTATTGGTGTGTGTCGCTGCAGCGGCAATTGAACG CTTCCCGCACGTTTTCGGTTTTCACGGCGTGCTTGGGACATGACGCAATC AAACGACGCGACCTAGTTGTTAGGGGGGGGGGGTGCTCGTTTGGTGGATA ATACCGGCAGCTCCGCCAGAGGAAGTAAAATGCAGTATCAGGGTAGAGCC CTAGTCTAAGCTGAATCCCGATCCTCATTTTCATTTCCCCATGAAGACAG CGAGAGGAAGGGGGGTGACGGGGGTTTCCTTGTCGTAGATCGCCCAAGAC CCAGGAAGAGAGGGACTAATTGGGAGCTCCTCACAAAAGTTGTATCTACA CAACAGGTGGCCAAATCGACACCCTGCGAGGAGTTGGGGGGCATCGCTTG TAAAGTCGTTGGAAGAGCGATGTCAACCCCTGAGACCATTTCGTACACGG CCTTCTGTTTTTCAAGGTTACACTTATTGTTTTCCTTGGTATACCCTGGT CCCCGAAATTCCGAGAGGCCAGACGGCTGAAAAGGTTACTCTTTGAGCTT AACAGAAGCAGAAGCACCAACCAGAATTCGGCCCCAGGGACATCGATGAG ATCGGACCTGTCGGGGCGTATGCTCCAAGTGTTTTGAGGTTACCCCAAGC CCACACCCACCGACCAAACTTGCTGTGGCCAACCTCAGAAGAACACTGGA GCGTATGCTCTTACAGGTTTGATCGCTATTGTTGATGTCCGAGGGGCCGA GTTCTGGTTGGGGCTGTCATCCCCTGTTGTGCTCAGCTTGGTCGTTTGTC GTTTGGAGAAGGTGGGGGGCTCTGTGATTTAATTTGAGCACATATAGGGG TCTAAAATCAAAACCGAAAACCTCCGGACCGCAAGAAACAGCGAGATTAC GTGTTTCCTCTTAGGGTAACCAGAGTTAGTCTGCAGTCGGTGACCAGAAA GAAGCTAATTTGAGTAAGCTCCGTGCACCACCATTCATTGTTTTTTATAG GGAGACAACCGGAAAAAATAAATAAAACTCCAATGTTTTATTTCTATCAA CGGCGAAGACTCGAAAGGTTTTCAGAAAGCATGAAAACATCGCATTCTGC TGGGTTTTCTAGGGTACCCTAGTAGTGTAGCGTAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig60:436714..445848+

>mRNA_P-littoralis_Contig60.100.1 ID=mRNA_P-littoralis_Contig60.100.1|Name=mRNA_P-littoralis_Contig60.100.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1437bp|location=Sequence derived from alignment at P-littoralis_Contig60:436714..445848+ (Pylaiella littoralis U1_48)
ATGGTCGTACGTTCCACGCCATGTAGGAGGTCTGCACTGGTGCCCCTGAT
CTTATGCTTCAGTTTCCAGGGTGCACCAGCTCTAGGTGGTTTGGAAGCCT
TTTTACAATCGCCGCCTATATTTTGCGGGGAAACTCCAATTCGTAGACCT
TCTAAAAGGACCAGCAGCAGCACCAGGAGAGACCTGTGGATTGCTTGTGG
CAGTGATGATGGTTGGAAACTGCGCTCATCCCCAGGATCGACCGACGAGA
GCTCAGGGGAGGAGATTGAAGATGATGGTAGCAGTAGCTCTCTCCCAGAC
ACGATCGGGCAGAACGCCCCGTTGGGTGTGCCCGCTGAGAAGTGGGCGCG
CGTTCTACAATCGGCTCGAGATAAGAAGACTGAGGACGACCGCCTTTCGC
CGAGCCCCCAGCACAAACCGAGCCACGTTGCTGCCGTCACGCTACAGGCC
CTCAGACGGAACGATGAGCCATACCCGAACTTCGGGTGCGAAATCGCGAT
CCGGTTCTCCAGCGCATCAAACCCGGCATCGGATTTCACCCCAGGGGGTA
TGCGCACGTACATCGATGACCCAAGCATGCCGTTCTATCGGATTCTAGGC
GATTGGGATGAGATGGGACCGGTGGAAGATGCCGAGATAGACGCCGCGGA
GACCGGCAAGGCTAACCAGCAGATTCGCGTGAAACAAGGAGGAGACTCGG
AGTGGAGCACGGTGTCCATGGATTTTGTGAGGGAAGGAGGCTGCTGGCTC
ATCGAGCGGCTTTGGATTGACGACAAGAGCGTTGCTGGCGGCGGGCGAGC
CGGGAAAGGGGACGAATCGCTCCCGCCACCCAGGCTTTCCGTGGCGGAGC
TTTTCGACGAGGACAGGCTTGAGGTGATGTCGTGCAAGTACGCCGACTAC
GACCCGGCTTCCCTCTTGACGGCGGGGGGGGACTGGCTCGAGGAGCGCCC
GAACCCTTCTTTGTCTCCGAAGGCGGTGGCTTTGACGTGCATCATTTCGC
TACGGCAAAACAACGACGGCAGCAGCAGCCCTGATAGCACAAGCAGCAGT
ATTGGCGATGACGAAGACGGGGACACATCACGCGGTAACGGTGCAGCTCC
TCCGCCTAGTTCGGCGGCGGCGGCGGCGGCGGCGGCAAAACTGCCGTTAA
ACCAGGGCTGCGAGCGCGTGATTCGGTTTTGCTCGCCCAACAACGTCGCA
AGTACGCTCACGCCGGCACACTTTGCACAGTATCTGAACGAGCCGTGGTA
CGCCATCTTCAAGGAGTGGGACGAGCTTTCGTTTCACAGCGAGGACATCT
CCGACGATGGCGGCACCGCAGATCTTGTGGTTCTGCTACGCCCCGAGCAT
GAAGAGGCGTGGACCTCGGTGAACTGGGAGTTGGTATTGTGCGATGGCAT
GTGGCTCACGGAGAGAATTTGGGTAGTAGATGTGTGA
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