prot_P-littoralis_Contig60.95.1 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig60.95.1 vs. uniprot
Match: A0A6H5KLH5_9PHAE (PseudoU_synth_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLH5_9PHAE) HSP 1 Score: 396 bits (1017), Expect = 2.280e-134 Identity = 227/350 (64.86%), Postives = 264/350 (75.43%), Query Frame = 0
Query: 3 AGTRTVAGCRLLVRPWGQTRS---GSNHPPLRTNRQSFRDKDVLHMDNHVLLINKPAGVLSQSDRTGDVDVAALAREYVRVAARKTGEAFVAVVHRLDRPVSGVMCVARTSKAASRLSASFKKREGVEKIYHAVVAGKLSGSGVRRDLLLSPDGSGAVARHGRGPRTAIV---LRGQGDDXXXAHHRLRAGSSPSSVAAAKPAELEWKVIGVSPSAAACLRCPHTGDPRTLVRVRLITGRKHQIRAQLAEMGHPVVGDTRYGKHYSSRQRQNRGGISTAMADADGRAMTLAPRLMEGAAEPLRDRSILLHASELAVPHPTRPGTVVWARAPPPEIWSELCGREFIHDVFG 346
AGTR +A C++L++ Q ++ S PL+ R SFR +DVL+MDNHVLL+NKPAG+LSQSDRTGD DVAALAREYVRVAA KTGEAFVA+VHRLDRPVSGVMCVARTSKAA+RLSASF+ R+GVEKIYHAVVAG L+G G+R+D L+SPD SGAVAR GRGPRT + +RG A RL A + P+S + K A+LEW+ I VSPS+A LRCP TG+PRTLVRVRLITGRKHQIR QLAEMGHPVVGDTRYG+ S Q+RGG DA + PR G+ EPL DRSILLHASEL VPHPTR G +V A A PP +WS+LCGR I +VFG
Sbjct: 4 AGTRGMAACKVLMQARVQRQACAASSRARPLQPRRPSFRVEDVLYMDNHVLLVNKPAGLLSQSDRTGDADVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDGVEKIYHAVVAGGLAGRGIRQDFLVSPDASGAVARRGRGPRTGLSSAPVRG------GAGGRLLA-AGPTSSSEGKLAQLEWEAIDVSPSSADRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGR---SSWCQSRGG------DATDESAVPPPRA--GSMEPLEDRSILLHASELIVPHPTRVGAMVRAVAAPPGMWSDLCGRSCIDEVFG 335
BLAST of mRNA_P-littoralis_Contig60.95.1 vs. uniprot
Match: D8LGZ5_ECTSI (23S RNA-specific pseudouridylate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ5_ECTSI) HSP 1 Score: 255 bits (651), Expect = 1.560e-80 Identity = 151/246 (61.38%), Postives = 173/246 (70.33%), Query Frame = 0
Query: 104 MCVARTSKAASRLSASFKKREGVEKIYHAVVAGKLSGSGVRRDLLLSPDGSGAVARHGRGPR---TAIVLRGQGDDXXXAHHRLRAGSSPSSVAAAKPAELEWKVIGVSPSAAACLRCPHTGDPRTLVRVRLITGRKHQIRAQLAEMGHPVVGDTRYGKHYSSRQRQNRGGISTAMADADGRAMTLAPRLMEGAAEPLRDRSILLHASELAVPHPTRPGTVVWARAPPPEIWSELCGREFIHDVFG 346
MCVARTSKAA+RLSASF+ R+ VEKIYHAVVAG L+G G+R+DLL+SPD SGAVAR GRGPR +++ RG A RL A + P+S K A+LEW+ I VS S+A LRCP TG+PRTLVRVRLITGRKHQIR QLAEMGHPVVGDTRYG+ +RGG DA + PR G EPL DRSILLHASEL VPHPTR G V A A PP +WS+LCGR I +VFG
Sbjct: 1 MCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAVARRGRGPRAGLSSVPARG------GAGGRLLA-AGPTSSPDGKLAQLEWEAINVSSSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGR--------SRGG------DATDESAVPPPR-RAGRIEPLEDRSILLHASELIVPHPTRVGATVRAVAAPPGMWSDLCGRSCIDEVFG 224
BLAST of mRNA_P-littoralis_Contig60.95.1 vs. uniprot
Match: A0A848XZP8_9BACT (RNA pseudouridine synthase n=1 Tax=Rhodothermaceae bacterium TaxID=2026787 RepID=A0A848XZP8_9BACT) HSP 1 Score: 150 bits (380), Expect = 3.200e-40 Identity = 107/292 (36.64%), Postives = 146/292 (50.00%), Query Frame = 0
Query: 41 DVLHMDNHVLLINKPAGVLSQSDRTGDVDVAALAREYVRVAARKTGEAFVAVVHRLDRPVSGVMCVARTSKAASRLSASFKKREGVEKIYHAVVAGKLSGSGVRRDLLLSPDGSGAVARHGRGPRTAIVLRGQGDDXXXAHHRLRAGSSPSSVAAAKPAELEWKVIGVSPSAAACLRCPHTGDPRTLVRVRLITGRKHQIRAQLAEMGHPVVGDTRYGKHYSSRQRQNRGGISTAMADADGRAMTLAPRLMEGAAEPLRDRSILLHASELAVPHPTRPGTVVWARAPPPEIW 332
+VL++DNH+L++ KP G+L+Q+DRTGD D+ + +++ K G F+ +VHRLDRPVSGVM +ARTSKAA RLS +F++R VEK Y A+V G++SG+G R D LL DG R IV + P K A L W+ +G +LV V+L+TGR HQ+R QLA +G P++GD RYG A + DG R++ LHA LA HP R +V+ APPP W
Sbjct: 2 EVLYLDNHLLVVVKPPGLLAQADRTGDTDLLTQGKAFLKEKFDKPGNVFLGLVHRLDRPVSGVMVLARTSKAAGRLSKAFRERR-VEKRYLALVEGRMSGAGEREDYLLKEDG-----------RVRIV----------------SADHPKG----KRAVLRWQALGEE-------------GRLSLVEVKLLTGRAHQVRVQLAALGTPILGDFRYG----------------ATRELDG-------------------RNLALHAYRLAFEHPVRREPLVFT-APPPVSW 212
BLAST of mRNA_P-littoralis_Contig60.95.1 vs. uniprot
Match: A0A800M4B4_9BACT (RluA family pseudouridine synthase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A800M4B4_9BACT) HSP 1 Score: 150 bits (378), Expect = 9.100e-40 Identity = 111/296 (37.50%), Postives = 146/296 (49.32%), Query Frame = 0
Query: 41 DVLHMDNHVLLINKPAGVLSQSDRTGDVDVAALAREYVRVAARKTGEAFVAVVHRLDRPVSGVMCVARTSKAASRLSASFKKREGVEKIYHAVVAGKLSGSGVRRDLLLSPDGSGAVARHGRGPRTAIVLRGQGDDXXXAHHRLRAGSSPSSVAAAKPAELEW---KVIGVSPSAAACLRCPHTGDPRTLVRVRLITGRKHQIRAQLAEMGHPVVGDTRYGKHYSSRQRQNRGGISTAMADADGRAMTLAPRLMEGAAEPLRD-RSILLHASELAVPHPTRPGTVVWARAPPPEIW 332
DVL++DNH+L++ KPAG+LSQ+D TGD+DV A++++R K G F +VHRLDRPV G M +ARTSKAASRL+ F++R EK Y A+V G+L GSG D LL R P+ ++ R+R G+ AK A + W V+G R+LV V L TGR HQIR QL+ +GHP+VGD RYG A PL D R I LHA+ L + HPT+ + APP +W
Sbjct: 4 DVLYLDNHLLVVAKPAGMLSQADDTGDLDVVTWAKDFLRREFDKPGNVFAGLVHRLDRPVGGAMVIARTSKAASRLAEQFRQRTP-EKRYLAMVEGRLDGSGRETDWLLKT----------RDPKRGTRVK-----------RVRQGTD-----GAKRAVMTWTSRSVLGT----------------RSLVEVGLETGRAHQIRVQLSGLGHPIVGDLRYG-----------------------------------AEAPLGDGRGIALHATHLTIEHPTKRDRRTFTSAPP-RVW 220
BLAST of mRNA_P-littoralis_Contig60.95.1 vs. uniprot
Match: A0A3M1NPK6_9BACT (RNA pseudouridine synthase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M1NPK6_9BACT) HSP 1 Score: 146 bits (368), Expect = 2.110e-38 Identity = 94/219 (42.92%), Postives = 121/219 (55.25%), Query Frame = 0
Query: 41 DVLHMDNHVLLINKPAGVLSQSDRTGDVDVAALAREYVRVAARKTGEAFVAVVHRLDRPVSGVMCVARTSKAASRLSASFKKREGVEKIYHAVVAGKLSGSGVRRDLLLSPDGSGAVARHGRGPRTAIVLRGQGDDXXXAHHRLRAGSSPSSVAAAKPAELEWKVIGVSPSAAACLRCPHTGDPR-TLVRVRLITGRKHQIRAQLAEMGHPVVGDTRYG 258
DVL++DNH+L++NKP G+L+Q+D TGD DV L + Y++ +K G F+ +VHRLDRP SGVM +ARTSKAA+RLS F+ R EK Y A+V G G+G D LL RT V+ P++ K AEL W+V+G D R +LV VRL TGR HQIR QLA GHP++GD RYG
Sbjct: 4 DVLYLDNHLLVVNKPPGMLAQADTTGDTDVVTLGKAYLKERFQKPGNVFLGLVHRLDRPASGVMVLARTSKAAARLSEQFR-RHSPEKRYLALVEGAWDGNGTAVDHLLKVG------------RTVRVV-------------------PATHPGGKRAELAWRVLG--------------SDGRVSLVEVRLTTGRPHQIRVQLAHRGHPLLGDLRYG 176
BLAST of mRNA_P-littoralis_Contig60.95.1 vs. uniprot
Match: A0A271J2Z8_9BACT (PseudoU_synth_2 domain-containing protein n=1 Tax=Rubrivirga marina TaxID=1196024 RepID=A0A271J2Z8_9BACT) HSP 1 Score: 146 bits (368), Expect = 2.300e-38 Identity = 110/295 (37.29%), Postives = 143/295 (48.47%), Query Frame = 0
Query: 43 LHMDNHVLLINKPAGVLSQSDRTGDVDVAALAREYVRVAARKTGEAFVAVVHRLDRPVSGVMCVARTSKAASRLSASFKKREGVEKIYHAVVAGKLSGSGVRRDLLLSPDGSGAVARHGRGPRTAIVLRGQGDDXXXAHHRLRAGSSPSSVAAAKPAELEWKVIGVSPSAAACLRCPHTGDPRTLVRVRLITGRKHQIRAQLAEMGHPVVGDTRYGKHYSSRQRQNRGGISTAMADADGRAMTLAPRLMEGAAEPLRDRSILLHASELAVPHPTR--PGTVVWARAPPPEIWSEL 335
L++DNH+L ++KP G+L+Q+DRTGD D+ +LA+ Y++ K G FV +VHRLDRP SGVM +ARTSKAASRLS F++R +K Y AVV G G + + + D G G +V G+G + L S+ R+LV V L+TGRKHQIRAQLAE+G P++GD RYG T AD R + LHA L V HPT+ P TVV APPPE W+ L
Sbjct: 4 LYLDNHLLAVSKPPGLLTQADRTGDPDLVSLAKAYLKERFDKPGNVFVGLVHRLDRPASGVMMLARTSKAASRLSDQFRRRVP-QKRYLAVVEGDPGDGGAWTERVDAIDKGG-------GGSVDVVPVGEGQRAALRYRTLARDSA-----------------------------------RSLVEVELLTGRKHQIRAQLAELGAPILGDFRYGNQ-------------TPFADG---------------------RGVALHAYRLVVEHPTKREPVTVV---APPPEAWAGL 218
BLAST of mRNA_P-littoralis_Contig60.95.1 vs. uniprot
Match: A0A259TYX9_9BACT (PseudoU_synth_2 domain-containing protein n=1 Tax=Rubricoccus marinus TaxID=716817 RepID=A0A259TYX9_9BACT) HSP 1 Score: 145 bits (367), Expect = 3.910e-38 Identity = 97/217 (44.70%), Postives = 123/217 (56.68%), Query Frame = 0
Query: 41 DVLHMDNHVLLINKPAGVLSQSDRTGDVDVAALAREYVRVAARKTGEAFVAVVHRLDRPVSGVMCVARTSKAASRLSASFKKREGVEKIYHAVVAGKLSGSGVRRDLLLSPDGSGAVARHGRGPRTAIVLRGQGDDXXXAHHRLRAGSSPSSVAAAKPAELEWKVIGVSPSAAACLRCPHTGDPRTLVRVRLITGRKHQIRAQLAEMGHPVVGDTRY 257
++L +DNH+L++ KPAG+LSQ D TGD DVA A+ +++ K G FV +V RLDRP SGVM +ARTSKAASRL+ F+KR VEK+Y A+V GKL GSG D L +T G R++ SS +S AK A LEW+ + T RTLVRV L TGR HQ+R QL +GHP+VGD RY
Sbjct: 4 EILFLDNHLLVVAKPAGMLSQGDSTGDRDVANWAKAFLKREFNKPGNVFVGLVQRLDRPASGVMVLARTSKAASRLTEQFRKRS-VEKVYLALVEGKLEGSGRLEDWLF---------------KTHDTETGT---------RVKRVSSTTS--GAKKAVLEWRALA-------------TVRGRTLVRVVLETGRPHQVRVQLGGIGHPIVGDLRY 180
BLAST of mRNA_P-littoralis_Contig60.95.1 vs. uniprot
Match: A0A1M5AMY6_9DELT (Ribosomal large subunit pseudouridine synthase D n=1 Tax=Desulfacinum infernum DSM 9756 TaxID=1121391 RepID=A0A1M5AMY6_9DELT) HSP 1 Score: 144 bits (362), Expect = 3.920e-37 Identity = 110/291 (37.80%), Postives = 144/291 (49.48%), Query Frame = 0
Query: 42 VLHMDNHVLLINKPAGVLSQSDRTGDVDVAALAREYVRVAARKTGEAFVAVVHRLDRPVSGVMCVARTSKAASRLSASFKKREGVEKIYHAVVAGKLSGSGVRRDLLLSPDGSGAVARHGRGPRTAIVLRGQGDDXXXAHHRLRAGSSPSSVAAAKPAELEWKVIGVSPSAAACLRCPHTGDPRTLVRVRLITGRKHQIRAQLAEMGHPVVGDTRYGKHYSSRQRQNRGGISTAMADADGRAMTLAPRLMEGAAEPLRDRSILLHASELAVPHPTRPGTVVWARAPPPEIW 332
VL+ DNH+L + KPAG+L Q DRTGD + LAR +++ K G F+ +VHRLDRPVSGV+ ARTSKAASRLS SF++RE V++ Y AVV G+ D + H V R G R+ AG+ P AA+ A L ++V+ TG R+L+ VRL TGRKHQIR QLA +G P+ GD RYG A++PL ++ I LHA + PHPTR ++V P P W
Sbjct: 16 VLYEDNHILGVYKPAGLLVQGDRTGDPCLLELARRWIKEEYGKPGNVFLGLVHRLDRPVSGVLVFARTSKAASRLSRSFRERETVKE-YLAVVEGR------------PKDPEATIVHH--------VHRVPGGST-----RVTAGTHP----AAQRASLSYRVL-------------ETGGSRSLLFVRLDTGRKHQIRVQLAALGCPIAGDLRYG-----------------------------------ASKPLANQQIALHARRICFPHPTR-ASMVEIVCPVPRQW 227
BLAST of mRNA_P-littoralis_Contig60.95.1 vs. uniprot
Match: UPI001BBF82E8 (RNA pseudouridine synthase n=1 Tax=Desulfosarcina cetonica TaxID=90730 RepID=UPI001BBF82E8) HSP 1 Score: 142 bits (359), Expect = 8.300e-37 Identity = 109/282 (38.65%), Postives = 141/282 (50.00%), Query Frame = 0
Query: 42 VLHMDNHVLLINKPAGVLSQSDRTGDVDVAALAREYVRVAARKTGEAFVAVVHRLDRPVSGVMCVARTSKAASRLSASFKKREGVEKIYHAVVAGKLSGSGVRRDLLLSPDGSGAVARHGRGPRTAIVLRGQGDDXXXAHHRLRAGSSPSSVAAAKPAELEWKVIGVSPSAAACLRCPHTGDPRTLVRVRLITGRKHQIRAQLAEMGHPVVGDTRYGKHYSSRQRQNRGGISTAMADADGRAMTLAPRLMEGAAEPLRDRSILLHASELAVPHPTRPGTVVW 323
VL+ DNH+L + KPAG+L Q DRTGDV + L +++++V K G+ F+A+VHRLDRPV+GV+ ARTSKAA+RLSA F++R VEK Y AVVAG+L G SG + H I R + R+ +P S AA L + V+ D RTL++V L TGR+HQIR QLA GHP++GD RYG A EPL R I L A L V HPTR +V+
Sbjct: 9 VLYTDNHLLALYKPAGLLVQGDRTGDVSLLELGKQWLKVRYAKPGQVFLAMVHRLDRPVAGVVLFARTSKAAARLSAQFRERR-VEKRYLAVVAGRLGGE------------SGRLVDH-------IERRDR-------RSRVVPAPTPQSQAA----RLRYTVLA-------------RDDRRTLLQVDLETGRRHQIRIQLAHAGHPLLGDLRYG-----------------------------------AGEPLPGRQIALLAHVLCVDHPTRDERLVF 211
BLAST of mRNA_P-littoralis_Contig60.95.1 vs. uniprot
Match: A0A3N1UFZ4_9DELT (23S rRNA pseudouridine1911/1915/1917 synthase n=1 Tax=Desulfosoma caldarium TaxID=610254 RepID=A0A3N1UFZ4_9DELT) HSP 1 Score: 142 bits (359), Expect = 1.430e-36 Identity = 109/294 (37.07%), Postives = 142/294 (48.30%), Query Frame = 0
Query: 42 VLHMDNHVLLINKPAGVLSQSDRTGDVDVAALAREYVRVAARKTGEAFVAVVHRLDRPVSGVMCVARTSKAASRLSASFKKREGVEKIYHAVVAGKLSGSGVRRDLLLSPDGSGAVARHG---RGPRTAIVLRGQGDDXXXAHHRLRAGSSPSSVAAAKPAELEWKVIGVSPSAAACLRCPHTGDPRTLVRVRLITGRKHQIRAQLAEMGHPVVGDTRYGKHYSSRQRQNRGGISTAMADADGRAMTLAPRLMEGAAEPLRDRSILLHASELAVPHPTRPGTVVWARAPPPEIW 332
VLH+DNH+L + KPAG+L Q D +GD+ + LAR++++ +K G FV +VHRLDRPVSG++ +ARTSKAASRLSA F++ +KIY AVV G+ P + A HG + ++ VL P + AEL ++ + S D RTL+ V L TGRKHQIRAQLA G P+VGD RYG A PL RSI LHA +L +PHPT+ G V P P W
Sbjct: 32 VLHVDNHLLAVYKPAGLLVQGDPSGDLSLLDLARKWIKERYKKPGNVFVGLVHRLDRPVSGLVLLARTSKAASRLSAVFRENRA-QKIYLAVVEGR-------------PSRACATLVHGLIRQESKSVAVL-------------------PVKTPGTQRAELHYRTVAFS-------------DQRTLLAVHLKTGRKHQIRAQLAHEGCPIVGDVRYG-----------------------------------APTPLPYRSIALHAWKLTLPHPTK-GEAVEISCPLPLNW 243 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig60.95.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig60.95.1 ID=prot_P-littoralis_Contig60.95.1|Name=mRNA_P-littoralis_Contig60.95.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=360bpback to top |