mRNA_P-littoralis_Contig1159.11.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1159.11.1
Unique NamemRNA_P-littoralis_Contig1159.11.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1159.11.1 vs. uniprot
Match: A0A6H5K9N8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9N8_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 8.510e-50
Identity = 133/317 (41.96%), Postives = 162/317 (51.10%), Query Frame = 3
Query:   27 EEVEFVGNQIRPMQAHDEAASCGR*IKEQPSCR--PMVTQLLSQFVTLTSWGELDA**STCLPVLVDIQPTLCQVLNITAAVIVTTPQ--SSASLTW*RELITILSM-------------------FQA*LWWRTWPTMTPSTEWLGA--------------------------------KQRQYILGGAIKRDWRTCGG*L*RLAETQVCHLLS------PSLMKR-----QQPFWNWRKLWFGEVAKLKYSDNDRPTLSFQPAAGTVTIETSDGKQVMTAADLRRKCRCALCVEEFSGEPLLDPTTIPEDIVPSE 779
            EEVEFVGNQIRPM AH         + +  +    PMV+QLLSQFVTLTSWGELD       P   DIQ TLCQVLNITAAVIVTTPQ  S   +    +L   +++                   F+  L       +T  ++ L A                                KQR+YI G   +       G    +    V  + S      P ++ +      + F    +    EVAKLK+SDNDRP LSFQPA GTV IETS GKQVM AADLRR+CRCALCVEEFSG+PLLDP ++PE+IVP+E
Sbjct:  228 EEVEFVGNQIRPMTAHGVKLMSYGFVNQGAAIMRGPMVSQLLSQFVTLTSWGELDYLVIDMPPGTGDIQLTLCQVLNITAAVIVTTPQKLSFTDVVKGIDLFDTVNVPSVAVVENMAYYDAVDQTAFKTGLESNIEDLLTLDSDELSAAAAREGLASPPQDETALRAAVIAEVMKKRASTKQREYIFGKGHQMRLADMWGITNTIRMPLVADVASSGDSGIPFVVSKPDSDHSESFSQLAEAVVREVAKLKFSDNDRPMLSFQPAEGTVMIETSGGKQVMAAADLRRQCRCALCVEEFSGKPLLDPASVPENIVPTE 544          
BLAST of mRNA_P-littoralis_Contig1159.11.1 vs. uniprot
Match: A0A835Z7N1_9STRA (HIGH-chlorophyll-fluorescence 101 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7N1_9STRA)

HSP 1 Score: 102 bits (253), Expect = 5.990e-21
Identity = 95/307 (30.94%), Postives = 126/307 (41.04%), Query Frame = 3
Query:   33 VEFVGNQIRPMQAHDEAASCGR*IKEQPSCR--PMVTQLLSQFVTLTSWGELDA**STCLPVLVDIQPTLCQVLNITAAVIVTTPQSSASLTW*RELITILSMFQA*LWWRTWPTMTPSTEWL---------------GAKQRQYILGGAIKRDWRTCGG*L*RLAE--TQVCHLLSPSLMKRQQPFWN-----------------------------------WRKLWFG---EVAKLKYSDNDRPTLSFQPAAGTVTIET---SDGKQVMTAADLRRKCRCALCVEEFSGEPLLDPTTIPEDIVP 773
            VEFVGN+I+P++A          + E  +    PMV QLL QFVTLTSWG+LD       P   DIQ TLCQ LNITAAVIVTTPQ  +      +++  + MF A           PS   +                A  R     GA+  D       +   A   T    +      KR    W                                    +R+L      EVAK++Y    RP +++  A   +TI+    +     +  A LRR CRCA CVEE +G PLLDP ++P  + P
Sbjct:  228 VEFVGNEIKPLEARGVKLMSYGYVNEGAAIMRGPMVVQLLQQFVTLTSWGDLDYLLIDMPPGTGDIQLTLCQNLNITAAVIVTTPQRLSFA----DVVKGIDMFDA--------VNIPSIAVVENMAYYNEVDVDALADAAARLVGSSGAMPADAEQLQALVRSAAAAATTQRQVFGRGHSKRLADMWGMTNVVRMPLHADVAAAGDAGVPFVVAHADGEHAALYRELAESVVREVAKIRYGRAARPHVAYDEARHLITIDAGAAAAAAATVEPAALRRACRCAACVEELTGRPLLDPASVPAGVRP 522          
BLAST of mRNA_P-littoralis_Contig1159.11.1 vs. uniprot
Match: B8CCD7_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCD7_THAPS)

HSP 1 Score: 97.1 bits (240), Expect = 1.970e-19
Identity = 80/259 (30.89%), Postives = 123/259 (47.49%), Query Frame = 3
Query:   33 VEFVGNQIRPMQAHDEAASCGR*IKEQPSCR--PMVTQLLSQFVTLTSWGELDA**STCLPVLVDIQPTLCQVLNITAAVIVTTPQSSASLTW*REL-------ITILSMFQA*LWWRTWPTMTPSTEWLGAKQRQYILGGAIKRDWRTCGG*L*RLAETQVCHLLSPSLMKRQQPFWNWRKLWFGEVAKLKY--SDNDRPTLSFQPAAGTVTIETSDGKQV-MTAADLRRKCRCALCVEEFSGEPLLDPTTIPEDIVP 773
            V FVG QI P++  D +      + E  +    PMVTQLL QF++LT+WG LD       P   DIQ TL Q LNITAAVIVTTPQ  + +   R +       +  +++ +   +     T        G K+R     G          G + +  ++    +L      +   +    K    EVAK+K+      RP++S+      + ++  D +   ++ A+LRR CRCA CVEE +G+ +L+P +I E + P
Sbjct:  150 VRFVGRQIAPLRRGDVSLMSFGYVNEGSAIMRGPMVTQLLDQFLSLTNWGALDYLIMDMPPGTGDIQLTLSQRLNITAAVIVTTPQELSFVDVERGVEMFDTVNVPCIAVVENMAYLEREETEMIRIFGPGHKRRLSEQWGIEHTYSVPLMGQIAQNGDSGTPFILDNPKSPQADIYRQLAKSVVSEVAKIKFCTGKGGRPSVSYDVEKSILRVDDGDIQNATISPAELRRGCRCAACVEELTGKQILNPASISESVKP 408          
BLAST of mRNA_P-littoralis_Contig1159.11.1 vs. uniprot
Match: A0A2V3IH99_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH99_9FLOR)

HSP 1 Score: 96.7 bits (239), Expect = 3.920e-19
Identity = 81/270 (30.00%), Postives = 127/270 (47.04%), Query Frame = 3
Query:   33 VEFVGNQIRPMQAHD-EAASCGR*IKEQPSCR-PMVTQLLSQFVTLTSWGELDA**STCLPVLVDIQPTLCQVLNITAAVIVTTPQSSASLTW*RELITILSMFQA*LWWRTWPTM----------TPSTE------WLGAKQRQYILGGAIKRDWRTCGG*L*RLAETQVCHLLSPSLMKRQQPFWNWRKLWFGEVAKLKYSDNDRPTLSFQPAAGTVTIE--TSDGKQVMTAADLRRKCRCALCVEEFSGEPLLDPTTIPEDIVPSEL 782
            V+F   +I+P+  +  +  S G    E    R PM+  +L+Q +T T WG LD       P   DIQ TL Q++N+TAA+IVTTPQ  + +    +++  + MF         P++           P T+        G KQR     G +          L   ++  V ++L+       + + N       EVAK+K+     P +SF   +G + I+   S+ +Q +  A LRR+CRCALCV+E +G   L+P  IPE I P ++
Sbjct:  209 VQFADGRIQPLTCNGVKLMSFGYVNPESAIMRGPMIANVLNQLLTTTQWGALDYLIIDMPPGTGDIQLTLSQIVNMTAALIVTTPQKLSFV----DVVKGIDMFDK----VGVPSVGVVENMAYFVAPDTQKEHYVFGKGHKQRLVEQYGLVNAFSMPIDAELSERSDNGVPYVLAHPSSLIAEEYKNMASSVVREVAKIKHGGRRTPEVSFDEDSGFIVIKKPNSEHEQQVWPATLRRQCRCALCVDEMTGRVRLNPDDIPETITPKKM 470          
BLAST of mRNA_P-littoralis_Contig1159.11.1 vs. uniprot
Match: A0A522UEP3_9BACT (Iron-sulfur cluster carrier protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A522UEP3_9BACT)

HSP 1 Score: 93.2 bits (230), Expect = 4.720e-18
Identity = 70/236 (29.66%), Postives = 116/236 (49.15%), Query Frame = 3
Query:  126 PMVTQLLSQFVTLTSWGELDA**STCLPVLVDIQPTLCQVLNITAAVIVTTPQSSASLTW*RELITILSMFQA*LWWRTWPTMTPSTEWLG------AKQRQYILG-GAIKRDWRTCG----------G*L*RLAETQVCHLLSPSLMKRQQPFWNWRKLWFGEVAKLKYSDNDRPTLSFQPAAGTVTIETSDGKQVMTAADLRRKCRCALCVEEFSGEPLLDPTTIPEDIVPSEL 782
            PMVTQ+++Q +T T WG+LD       P   DIQ TL Q++ ITAAVIVTTPQ  A +    +++  + MF      +    +    E +         ++ ++ G GA K+     G            + RL+++    +L+  ++     +         EV+K+K+    RP + ++   G +   ++    V+ AA+LRR+CRCA C +EFSG P LDP T+ + + P  +
Sbjct:  190 PMVTQVINQLLTQTDWGQLDYLIIDFPPGTGDIQLTLTQLIPITAAVIVTTPQQLAFV----DVVKGIQMFD-----QVKVPVVAVVENMSYFECNKCHEKHHLFGQGARKKLVEQFGIQSSFEIPILPEISRLSDSGQPVVLADGVLATH--YTGIADAVVREVSKIKFGGLGRPEIRYEAGRGILATTSAGAIYVIPAAELRRQCRCAACRDEFSGRPTLDPATVADSVFPEAI 414          
BLAST of mRNA_P-littoralis_Contig1159.11.1 vs. uniprot
Match: A0A1E7EPY3_9STRA (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EPY3_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.630e-17
Identity = 71/204 (34.80%), Postives = 100/204 (49.02%), Query Frame = 2
Query:   98 VNQGAAIMQAYGHPAAL-AVRHPDELGRTRRLVIDMPPGTGGHPADFVPGLEHYRSCHRHHAAKLSFTDVVKGIDN-DTVNVPSVAVVENMAYYDAVDGMARCKAAAVHFGRGHQARLADMWGIT----------VASCGDSGVPFVIAKPDE-EATAFLELAEAVVRGSGKAEVQRQR--------------QTDPVVPTSCR 628
            +N+G+A+M+       L       + G    L++DMPPGTG         L    +       +LSF DVV+G++  DTVNVP VAVVENMAYY++ D +         FG GH+ RL++ WGI           +A+ GDSG PFV+  PD  +A  + ELA +VV    KA+   +R                +P+ PT  R
Sbjct:  261 INEGSAVMRGPMVSQLLDQFLSVTQWGSLDYLILDMPPGTGDIQLTLTQRLNITAAVIVTTPQELSFADVVRGVEMFDTVNVPCVAVVENMAYYES-DPIKI-------FGDGHKRRLSEQWGIEHMYSMPLTDQIATNGDSGTPFVLGHPDSPQAKIYRELATSVVSEVSKAKYSSRRPEINYIEEFNIIQFDDEPLAPTELR 456          
BLAST of mRNA_P-littoralis_Contig1159.11.1 vs. uniprot
Match: R7Q4I6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4I6_CHOCR)

HSP 1 Score: 90.5 bits (223), Expect = 5.390e-17
Identity = 74/274 (27.01%), Postives = 122/274 (44.53%), Query Frame = 3
Query:   33 VEFVGNQIRPMQAHD-EAASCGR*IKEQPSCR-PMVTQLLSQFVTLTSWGELDA**STCLPVLVDIQPTLCQVLNITAAVIVTTPQSSASLTW*RELITILSMFQA*LWWRTWPTMTPSTEWL--------------------GAKQRQYILGGAIKRDWRTCGG*L*RLAETQVCHLLSPSLMKRQQPFWNWRKLWFGEVAKLKYSDNDRPTLSFQPAAGTVTIE--TSDGKQVMTAADLRRKCRCALCVEEFSGEPLLDPTTIPEDIVPSEL 782
            V+F   +IRP++AH  +  S G    +    R PM+  +L+Q +T T WG LD       P   D+Q TL Q++N+TAAVIVTTPQ  + +    +++  + MF             PS   +                    G +QR     G            L   +++ + ++++         +         EVAK++Y     P + +  A+G + +    ++  Q +  A LRR+CRCALCV+E +G   LDP  + +D+ P +L
Sbjct:  216 VQFKDGRIRPLEAHGVKLMSFGYVNPDSAIMRGPMIANVLNQLLTTTEWGVLDYLVIDLPPGTGDVQLTLSQIINMTAAVIVTTPQKLSFV----DVVKGIDMFDK--------VSVPSVAVVENMSYFVAPDTGVKHHIFGKGHQQRLIEQYGITDSFSMPIDPELSEKSDSGIPYVVANPKSMLSDEYQRLASAVVQEVAKIQYGGLGIPDVQWDEASGNINVRMPNTETTQKIWPATLRRQCRCALCVDEMTGAQKLDPADVSDDVRPMKL 477          
BLAST of mRNA_P-littoralis_Contig1159.11.1 vs. uniprot
Match: A0A7S1TBR1_9RHOD (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TBR1_9RHOD)

HSP 1 Score: 89.7 bits (221), Expect = 9.400e-17
Identity = 82/270 (30.37%), Postives = 130/270 (48.15%), Query Frame = 3
Query:   33 VEFVGNQIRPMQAHD-EAASCGR*IKEQPSCR-PMVTQLLSQFVTLTSWGELDA**STCLPVLVDIQPTLCQVLNITAAVIVTTPQSSASLTW*RELITILSMFQ-------A*LWWRTWPTMTPSTEWLGAKQRQYILGGA--IKRDWRTCGG*-------L*RLAETQVCHLLSPSLMKRQQPFWNWRKLWFGEVAKLKYSDNDRPTLSFQPAAGTVTIETSDG--KQVMTAADLRRKCRCALCVEEFSGEPLLDPTTIPEDIVPSEL 782
            VEF  + I+PM     +  S G    E    R PM+  L+SQ +T T WGE+D       P   D+Q TL QV NI AAVIVTTPQ  A +    +++  + MF+       A +    + T   S    G + R +  G A  +KRD+             + + +++ +  ++S    +  Q +         E+AK+++     P ++F    G + I   DG   + +  ADLRRKCRCA+CV+E +G P+LDP  + + + P+ +
Sbjct:  205 VEFEDSLIKPMMYGGVKLMSYGYVNGETAVMRGPMIATLVSQLLTTTDWGEIDYLLIDMPPGTGDVQITLGQVANIDAAVIVTTPQRLAFV----DVVKGIQMFEKVNIPSIAVVENMAYFTAPES----GVRHRIFGEGFAERLKRDFGIENSFPVPIDPLVSQKSDSGIPFVVSCPDSESAQVYQEIAASVVQELAKIRFGGRKFPEVTFSKETGNIEIRI-DGTLSESIWPADLRRKCRCAVCVDEMTGRPILDPRDVDDGVQPTSI 465          
BLAST of mRNA_P-littoralis_Contig1159.11.1 vs. uniprot
Match: A0A328RPE3_9BACT (Iron-sulfur cluster carrier protein n=1 Tax=Candidatus Marinamargulisbacteria bacterium SCGC AG-414-C22 TaxID=2184344 RepID=A0A328RPE3_9BACT)

HSP 1 Score: 89.4 bits (220), Expect = 1.050e-16
Identity = 75/241 (31.12%), Postives = 117/241 (48.55%), Query Frame = 3
Query:  108 EQPSCR--PMVTQLLSQFVTLTSWGELDA**STCLPVLVDIQPTLCQVLNITAAVIVTTPQSSASLTW*RELITILSMFQA*LWWRTWPTMTPSTEWLG------AKQRQYILG-GAIKRDWRTCG----------G*L*RLAETQVCHLLSPSLMKRQQPFWNWRKLWFGEVAKLKYSDNDRPTLSFQPAAGTVTIETSDGKQVMTAADLRRKCRCALCVEEFSGEPLLDPTTIPEDIVP 773
            EQP+    PMV+Q++SQF+ LT+WG+ D       P   DIQ TLCQ++ +TAA+IVTTPQ  + +    +++  + MF      R    +  + E +         ++QY+ G GA+KR     G            + +  +T V  + S S    +  F ++ +    EV +L   D   P L F P  G +       + ++    LR  C+ AL  +EFS E L+DP +IP+DI P
Sbjct:  183 EQPAILRGPMVSQIISQFLLLTAWGDCDYLIIDMPPGTGDIQLTLCQIIPLTAAIIVTTPQHISFI----DVVKGIEMFD-----RLQVPVIGAVENMSYFQANEQSEKQYLFGKGALKRLVDEFGFENTLAIPITTAISQAGDTGVPFVESDSESSIKALFSDFAETVVTEVDRLAAGDLSLPKLGFVPKEGIIIQFNDLPELIINPKTLRLACQSALNRDEFSDELLIDPASIPDDIHP 414          
BLAST of mRNA_P-littoralis_Contig1159.11.1 vs. uniprot
Match: B5Y591_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y591_PHATC)

HSP 1 Score: 88.6 bits (218), Expect = 1.880e-16
Identity = 66/170 (38.82%), Postives = 87/170 (51.18%), Query Frame = 2
Query:   98 VNQGAAIMQAYGHPAAL----AVRHPDELGRTRRLVIDMPPGTGGHPADFVPGLEHYRSCHRHHAAKLSFTDVVKGIDN-DTVNVPSVAVVENMAYYDAVDGMARCKAAAVHFGRGHQARLADMWGIT----------VASCGDSGVPFVIAKPDEE-ATAFLELAEAVV 559
            VN G+A+M+       L    +V H    G    L++DMPPGTG         L    +       +LSF DVV+G++  DTVNVP +AVVENMAYY++ D           FG GH+ RL+  WGI           +A+ GD+G PFV+  PD   A  + ELA AVV
Sbjct:  168 VNDGSAVMRGPMVTQLLDQFLSVTH---WGALDYLILDMPPGTGDIQLTLTQKLNITAAVIVTTPQELSFADVVRGVEMFDTVNVPCIAVVENMAYYESAD-----PEKIQIFGAGHRDRLSQQWGIEHSFSIPLLNKIAANGDNGTPFVLEFPDSPPAKIYQELASAVV 329          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1159.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9N8_9PHAE8.510e-5041.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z7N1_9STRA5.990e-2130.94HIGH-chlorophyll-fluorescence 101 n=1 Tax=Tribonem... [more]
B8CCD7_THAPS1.970e-1930.89Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A2V3IH99_9FLOR3.920e-1930.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A522UEP3_9BACT4.720e-1829.66Iron-sulfur cluster carrier protein n=1 Tax=Verruc... [more]
A0A1E7EPY3_9STRA1.630e-1734.80p-loop containing nucleoside triphosphate hydrolas... [more]
R7Q4I6_CHOCR5.390e-1727.01Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1TBR1_9RHOD9.400e-1730.37Hypothetical protein n=2 Tax=Compsopogon caeruleus... [more]
A0A328RPE3_9BACT1.050e-1631.12Iron-sulfur cluster carrier protein n=1 Tax=Candid... [more]
B5Y591_PHATC1.880e-1638.82Predicted protein (Fragment) n=1 Tax=Phaeodactylum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1159contigP-littoralis_Contig1159:54172..55834 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FMK8
PFAMsDUF971,FeS_assembly_P,ParA
Model size785
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue9.15e-34
EggNOG OGsCOG0489@1|root,KOG3022@2759|Eukaryota
DescriptionComponent of the cytosolic iron-sulfur (Fe S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NBP35-CFD1 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins
Cds size270
COG categoryD
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789477.6369069-CDS-P-littoralis_Contig1159:54171..544411680789477.6369069-CDS-P-littoralis_Contig1159:54171..54441Pylaiella littoralis U1_48CDSP-littoralis_Contig1159 54172..54441 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789477.6503987-UTR-P-littoralis_Contig1159:54441..545631680789477.6503987-UTR-P-littoralis_Contig1159:54441..54563Pylaiella littoralis U1_48UTRP-littoralis_Contig1159 54442..54563 -
1680789477.6610844-UTR-P-littoralis_Contig1159:54724..548751680789477.6610844-UTR-P-littoralis_Contig1159:54724..54875Pylaiella littoralis U1_48UTRP-littoralis_Contig1159 54725..54875 -
1680789477.6705453-UTR-P-littoralis_Contig1159:55592..558341680789477.6705453-UTR-P-littoralis_Contig1159:55592..55834Pylaiella littoralis U1_48UTRP-littoralis_Contig1159 55593..55834 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1159.11.1prot_P-littoralis_Contig1159.11.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1159 54172..54441 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1159.11.1

>prot_P-littoralis_Contig1159.11.1 ID=prot_P-littoralis_Contig1159.11.1|Name=mRNA_P-littoralis_Contig1159.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=90bp
MKRQQPFWNWRKLWFGEVAKLKYSDNDRPTLSFQPAAGTVTIETSDGKQV
MTAADLRRKCRCALCVEEFSGEPLLDPTTIPEDIVPSEL*
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mRNA from alignment at P-littoralis_Contig1159:54172..55834-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1159.11.1 ID=mRNA_P-littoralis_Contig1159.11.1|Name=mRNA_P-littoralis_Contig1159.11.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1663bp|location=Sequence derived from alignment at P-littoralis_Contig1159:54172..55834- (Pylaiella littoralis U1_48)
CTGCCCACCATGGTTAAACCAGACAGGAAGAAGTGGAGTTTGTGGGCAAT CAAATTCGCCCCATGCAAGCCCACGATGAAGCCGCGAGCTGCGGTCGGTG AATCAAGGAGCAGCCATCATGCAGGCCTATGGTCACCCAGCTGCTCTCGC AGTTCGTCACCCTGACGAGCTGGGGAGAACTAGACGCCTAGTAATCGACA TGCCTCCCGGTACTGGTGGACATCCAGCCGACTTTGTGCCAGGTACGTCG GATGTGGCTTGTCTCGAGAAGTAAAGCCTCCAGGAAAAGGGGTCGGCAAT ACGAAACTCGAAGTGCGTTGCAATTTGGTATTGTCATACGGGAGTCGGGA GTTTCTAAACAAATTTGGAGAGCCTATGCGCCATTAAATGATATGGTGCG GGGGAAGCGAGATTCCGTGCTATCGTTTGCCTTCCTACATTGGCACCGAG ACACCAGCTATATTGATGTTTATTGACTGGTGCCCAATTCAGCGAACAAT AACGCGCTGGAACCATACGCTGTTGATTGGGTATGGTCTCTTTTCCTCCT GCTGTCTGGAAACTGCCTTTCTAGCCTCTGCAATAAGCTGCGATTCTGCA CGACACGACACGCAAGGTTGGTCGGTCCAAACCTTGCTTCGCGACGATTA TTCTGGCAAGTCCCACGACCCGAGGTCCAGTAAAATCGCAGCGATGGGCG AACTCTGGCCATCGGTTTTTCGATGTTTTATGCTTGAGGAGAGTTTCGCA TATTGATCGCGAGGTGTATTATGAATAAAAGACTGCGCGGCGGCGTTGCA ACCTTCCAGACAAAGTTGGTGACAATGTTTTGTTGGTGGTATCGTGCTGT CCGCCGTTCACCTGTGTCGTCGTTTGTTTGTTCGGCCGAACTCTTCCGCC ACGTCACCGTGCCTCCCCGTCTTCTATTCATCCGCAACTCTGTATGTTCA ATGCCCCAGGTCTTGAACATTACCGCAGCTGTCATCGTCACCACGCCGCA AAGCTCAGCTTCACTGACGTGGTGAAGGGAATTGATAACGATACTGTCAA TGTTCCAAGCGTAGCTGTGGTGGAGAACATGGCCTACTATGACGCCGTCG ACGGAATGGCGTTGGAGGTTGGACTTGAGGACAGCATTGAGGAGTTACTC AATCTGGACGATGCCCAACTTCGTGAAGCTGCTGTTTCAGAAGGCATTGT TTCACCATCATCCTCTCCAGACCAAACGTGTGTACGAGCCGGCTTGATCG CTCAAATGATGAAAAAACGAGTCGGTGCAAAGCAGCGGCAGTACATTTTG GGAGGGGCCATCAAGCGAGACTGGCGGACATGTGGGGGATAACTGTAGCG TCTTGCGGAGACTCAGGTGTGCCATTTGTTATCGCCAAGCCTGATGAAGA GGCAACAGCCTTTCTGGAACTGGCGGAAGCTGTGGTTCGGGGAAGTGGCA AAGCTGAAGTACAGCGACAACGACAGACCGACCCTGTCGTTCCAACCAGC TGCAGGCACTGTCACGATAGAGACGAGTGACGGCAAGCAAGTGATGACAG CGGCGGACCTGCGGCGAAAATGTCGATGCGCGCTCTGCGTCGAAGAATTC TCGGGAGAGCCACTGCTTGATCCTACGACCATACCCGAAGACATCGTTCC GTCTGAACTTTGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig1159:54172..55834-

>mRNA_P-littoralis_Contig1159.11.1 ID=mRNA_P-littoralis_Contig1159.11.1|Name=mRNA_P-littoralis_Contig1159.11.1|organism=Pylaiella littoralis U1_48|type=CDS|length=270bp|location=Sequence derived from alignment at P-littoralis_Contig1159:54172..55834- (Pylaiella littoralis U1_48)
ATGAAGAGGCAACAGCCTTTCTGGAACTGGCGGAAGCTGTGGTTCGGGGA
AGTGGCAAAGCTGAAGTACAGCGACAACGACAGACCGACCCTGTCGTTCC
AACCAGCTGCAGGCACTGTCACGATAGAGACGAGTGACGGCAAGCAAGTG
ATGACAGCGGCGGACCTGCGGCGAAAATGTCGATGCGCGCTCTGCGTCGA
AGAATTCTCGGGAGAGCCACTGCTTGATCCTACGACCATACCCGAAGACA
TCGTTCCGTCTGAACTTTGA
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