prot_P-littoralis_Contig60.79.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig60.79.3
Unique Nameprot_P-littoralis_Contig60.79.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length780
Homology
BLAST of mRNA_P-littoralis_Contig60.79.3 vs. uniprot
Match: A0A6H5KJG2_9PHAE (Tub domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJG2_9PHAE)

HSP 1 Score: 421 bits (1082), Expect = 6.250e-133
Identity = 424/821 (51.64%), Postives = 483/821 (58.83%), Query Frame = 0
Query:    1 MSTSRLKRNIATLGTFECRNIEAESRDAAALALALRGTLKEAREGQISWSDREAIMGWLHKNKKSMPQACVGLCGQLEIRLRFTFIPGLSWPGQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYVSPDATKRXXXXXXXXXXXXXXXXXXXALEDGNYSSTDDEAG---VIGLGGFTTRDLISSGLGSPEILPSVLEHGTAAGDVKSPLEQEDEAFVLLPTPRGMKTYCIIQRTRSTIRTYFRMFLQEQRPLVDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETLRALLAXXXXXXXXXXXXXXDADGGVGGARFLLSSKRYRSTKPRSASYVWSKKNGVWKDT---------------KQRAASVSPA------SPFSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGTA--------VAGSPG---YGGSEAPSPVLSXXXXXXXXXXXXVERSGSSSTNPACWAVVVNVQSEGEGKLLSVAAIVPDPSAAAXXXXXXXXXXXXXXXXXXXXXXXXXEHGAESAL-AEGLRKWEKTGTVPAGTIILRSKQPKWSAWQGCYTLGFEQGGERVREPSRKNVSMLAVDGNSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD---GHH---SLSLVSRPLLQMGKISEDHFSLDFCWPLSPLQAFVAAMSIFDG 779
            MSTS+L+R+IA+L  F+C++IE ESRDAAALALALR TL++AR GQ+SWSDR+A++GWLHKN+KSMP  C+GLCG+LE RL F+F+PGLSWPG +         XXXXXXXXXXXXXX                                XXXXX                             +YVSPD+ +                      EDGNYSSTDDEAG   VIGLGG   RDL+SSGLGSPE+LPSVLE  T   DV S L++ D+ F+L PTP+G+K+YCIIQRTRSTIRTYFR+FLQEQRPL ++     XXXX                 XXXXXXXXXXXXXXXXXXXXXXX                                                ETLRA LA       XXXXXXX     VGGA+FLLSSKRYRST+PRSASYVWS+ NGVWKD                K      SP+         +++XXXXXXXXXXXXX      XXXXXXX  +GG          ++GSPG     GS+A SP LS   XXXXXXXXX               +VVNVQ+EGEGKLLSVAAIVPDPSA+       XXXXXXXXXXXXXX     E   +S L AEGLRKWEK G VP G I+LRSKQPKWSAWQGC+TL F++GGERVREPSRKNVSM+A D +   XXXXXXXXXXXXXXXXXX                       D   GHH   S++  S+  LQ+GKISEDHFSLDFCWPLSPLQAFVAAMSIFDG
Sbjct:    1 MSTSKLRRSIASLDAFDCKSIEPESRDAAALALALRSTLEQARAGQMSWSDRDALLGWLHKNRKSMPTPCLGLCGRLENRLSFSFLPGLSWPGHRQEALPSTAAXXXXXXXXXXXXXXGSAETVVVRRRNLAGLPPPVGKNASEAAEADAXXXXXGSSSAASP---------------------SYVSPDSKR----------------GKGAGQEDGNYSSTDDEAGAAGVIGLGG-APRDLVSSGLGSPEVLPSVLEQATV--DVSS-LQEADDNFLLQPTPQGLKSYCIIQRTRSTIRTYFRLFLQEQRPLAEDGSGGDXXXXNASPTTTTTSGPATGVPXXXXXXXXXXXXXXXXXXXXXXXAFSATGGSASGGVTHSGGGM----------------------------ETLRAFLAVGGGGGSXXXXXXXXXXA-VGGAQFLLSSKRYRSTRPRSASYVWSR-NGVWKDKHALAKVATQPWGGKGKGEGTMTSPSLVGDHLRAATAAXXXXXXXXXXXXXFSSVPAXXXXXXXSADGGXXXXXXXXXXISGSPGDVGSDGSKAQSPALSGSSXXXXXXXXXXXXXXXQG------GLVVNVQAEGEGKLLSVAAIVPDPSASLSAPGSAXXXXXXXXXXXXXX-----EQMVDSGLLAEGLRKWEKAGVVPPGMIVLRSKQPKWSAWQGCHTLDFDRGGERVREPSRKNVSMVAADASPAXXXXXXXXXXXXXXXXXXXAGRGNRAGGGTNSEAQQTGGGDKDHAEGHHHRPSITAASKSTLQVGKISEDHFSLDFCWPLSPLQAFVAAMSIFDG 739          
BLAST of mRNA_P-littoralis_Contig60.79.3 vs. uniprot
Match: D8LGZ8_ECTSI (Tub domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ8_ECTSI)

HSP 1 Score: 357 bits (915), Expect = 2.250e-109
Identity = 423/808 (52.35%), Postives = 472/808 (58.42%), Query Frame = 0
Query:    1 MSTSRLKRNIATLGTFECRNIEAESRDAAALALALRGTLKEAREGQISWSDREAIMGWLHKNKKSMPQACVGLCGQLEIRLRFTFIPGLSWPGQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYVSPDATKRXXXXXXXXXXXXXXXXXXXALEDGNYSSTDDEAGVIGLGGFTTRDLISSGLGSPEILPSVLEHGTAAGDVKSPLEQEDEAFVLLPTPRGMKTYCIIQRTRSTIRTYFRMFLQEQRPLVDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETLRALLAXXXXXXXXXXXXXXDADGGVGGARFLLSSKRYRSTKPRSASYVWSKKNGVWKDTKQRAASVSPASPFSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGT----------------------AVAGSPGYGGSEAPSPVLSXXXXXXXXXXXXVERSGSSSTNPACWAVVVNVQSEGEGKLLSVAAIVPDPSAAAXXXXXXXXXXXXXXXXXXXXXXXXXEHGAESAL-AEGLRKWEKTGTVPAGTIILRSKQPKWSAWQGCYTLGFEQGGERVREPSRKNVSMLAVDGNSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD---GHH---SLSLVSRPLLQMGKISEDHFSLDFCWPLSPLQAFVAAMSIFDG 779
            MSTS+L+R+IA+L  F+C +IE ESRDAAALALALR TL++AR GQ+SWSDR+A++GW+HKN+KSMP  CVGLCG+LE RL F+F+PGLSWPG +                                                                                           V   A     XXXXXXXXXX        +   N +      G                        +      A  DV S L++ D+ F+L PTP+G+K+YCIIQRTRSTIRTYFR+FLQEQRPL ++     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXX                             G VGGA+FLLSSKRYRSTKPRSASYVWS+ NGVWKD K   A V+   P+                          XXXX   G                       +V G  G G  EA                  V R      +PACWAVVVNVQ+EGEGKLLSVAAIVPDPSA+       XXXXXXXXX          E   +S L AEGLRKWEKTG VP G I+LRSKQPKWSAWQGC+TL F++GGERVREPSRKNVSM+A D +   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D   GHH   S++  SRP LQ+GKISEDHFSLDFCWPLSPLQAFVAAMSIFDG
Sbjct:    1 MSTSKLRRSIASLDAFDCTSIEPESRDAAALALALRSTLEQARAGQMSWSDRDALLGWMHKNRKSMPTPCVGLCGRLENRLSFSFLPGLSWPGHRQEA----------------------------------------------------------------------------------------VPSTAVSAAPXXXXXXXXXXHGSADTVVIRRRNLAGLPPPVGK-------------------NASEAAEAEAAATVDVSS-LQEADDNFLLQPTPQGLKSYCIIQRTRSTIRTYFRLFLQEQRPLAEDGSGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAXXXXXXXXXXXXXXXXXXXXX-----------------------------GAVGGAQFLLSSKRYRSTKPRSASYVWSR-NGVWKD-KHALAKVA-TQPWGGKGKGEGTMTSPSLVGDHLRAATAAXXXXASPGPRGTWGRTAARLKARRCLVRAAGSVGGRRGGGAEEA-----------QVGRGAGVRRPEGVGGSPACWAVVVNVQAEGEGKLLSVAAIVPDPSASLSAPGSAXXXXXXXXX----------EQMVDSGLLAEGLRKWEKTGVVPPGMIVLRSKQPKWSAWQGCHTLDFDRGGERVREPSRKNVSMIAADASPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDHTDGHHHRPSITAASRPTLQVGKISEDHFSLDFCWPLSPLQAFVAAMSIFDG 647          
BLAST of mRNA_P-littoralis_Contig60.79.3 vs. uniprot
Match: A0A835YQA2_9STRA (Tub domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQA2_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.540e-25
Identity = 75/214 (35.05%), Postives = 103/214 (48.13%), Query Frame = 0
Query:  567 AVVVNVQSEGEGKLLSVAAIVPDPSAAAXXXXXXXXXXXXXXXXXXXXXXXXXEHGAESALAEGLRKWEKTGTVPAGTIILRSKQPKWSAWQGCYTLGFEQGGERVREPSRKNVSMLAVDGNSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGHHSLSLVSRPL-LQMGKISEDHFSLDFCWPLSPLQAFVAAMSIFDG 779
            A+ VNV ++   +LLS+ A++PDP                                 E++L   L+     G  P G ++L+SK+P+WSAWQGC+TL FE+G +RVREPSRKN+S++   G S                                           D   S +L S P+ LQMGK+++D+FSLDF +PLSP QAFV AMS FDG
Sbjct:  358 AIAVNVVTDASSRLLSITAVIPDPQDEPSPASTD-----------------------EASLLAVLQLATAAGAPPPGFLLLQSKKPRWSAWQGCHTLCFERGAQRVREPSRKNISVVLAPGASASRGELAGKGAAAVASAWDM-----------------------DDQQSEALRSAPVVLQMGKLADDYFSLDFNYPLSPFQAFVLAMSAFDG 525          
BLAST of mRNA_P-littoralis_Contig60.79.3 vs. uniprot
Match: A0A7S3F1Y1_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F1Y1_9EUKA)

HSP 1 Score: 55.8 bits (133), Expect = 7.820e-6
Identity = 42/138 (30.43%), Postives = 58/138 (42.03%), Query Frame = 0
Query:  643 GTIILRSKQPKWSAWQGCYTLGFEQGGERVREPSRKNVSMLAVDGNSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGHHSLSLVSRPL-LQMGKISEDHFSLDFCWPLSPLQAFVAAMSIFDG 779
            G + LR+K P+W+   G +TL +     RV + S KN+ ++A D  +G                                                   SR L  QMGK+SED FS+D+  PLSPLQAF  A++IFD 
Sbjct:    5 GLLSLRNKDPEWNEELGAFTLEYSG---RVTQASVKNIQLVARDVPAG---------------------------------------------------SRDLHFQMGKVSEDRFSVDWRTPLSPLQAFGIALAIFDS 88          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig60.79.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KJG2_9PHAE6.250e-13351.64Tub domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LGZ8_ECTSI2.250e-10952.35Tub domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YQA2_9STRA1.540e-2535.05Tub domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S3F1Y1_9EUKA7.820e-630.43Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000007Tubby, C-terminalPFAMPF01167Tubcoord: 642..778
e-value: 2.6E-16
score: 60.1
IPR025659Tubby-like, C-terminalGENE3D3.20.90.10Tubby Protein; Chain Acoord: 566..778
e-value: 4.3E-22
score: 80.8
IPR025659Tubby-like, C-terminalSUPERFAMILY54518Tubby C-terminal domain-likecoord: 643..778
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 700..736
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 597..628
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..220
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 361..376
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 361..407
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 498..555
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 704..726
NoneNo IPR availablePANTHERPTHR16517TUBBY-RELATEDcoord: 622..778
NoneNo IPR availablePANTHERPTHR16517:SF7PROTEIN KING TUBBYcoord: 622..778

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig60contigP-littoralis_Contig60:377812..391706 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig60.79.3mRNA_P-littoralis_Contig60.79.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig60 376086..391754 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig60.79.3 ID=prot_P-littoralis_Contig60.79.3|Name=mRNA_P-littoralis_Contig60.79.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=780bp
MSTSRLKRNIATLGTFECRNIEAESRDAAALALALRGTLKEAREGQISWS
DREAIMGWLHKNKKSMPQACVGLCGQLEIRLRFTFIPGLSWPGQQQQQQQ
QQQQRQQGAATAAAAAAGHSNNDSSRNNSETVVIRRRNLAGLPPPVGRNA
AEAAEADAAAAAAAAAAAGGGASSALGYSSNASSAYVSPDATKRGSSVTG
SGGGGGGGGGGRAALEDGNYSSTDDEAGVIGLGGFTTRDLISSGLGSPEI
LPSVLEHGTAAGDVKSPLEQEDEAFVLLPTPRGMKTYCIIQRTRSTIRTY
FRMFLQEQRPLVDEDDDDANPPSTATTTAAAAAAAAAAGVAAATVSGGGY
TAAAGNSTSNSTSNNHNNSSTGAISGGGRGDSGGAASSAVEASGSNGGGG
GGGGGGASGGMETLRALLAVGGGGAASGGASGGDADGGVGGARFLLSSKR
YRSTKPRSASYVWSKKNGVWKDTKQRAASVSPASPFSSSSASATAFPVSG
GSGSGSSGGGGGGGGGGEGGTAVAGSPGYGGSEAPSPVLSGSSGGGGLAA
GGVERSGSSSTNPACWAVVVNVQSEGEGKLLSVAAIVPDPSAAAAVGTSA
PGSASGSGSRSGGGGGGGGEHGAESALAEGLRKWEKTGTVPAGTIILRSK
QPKWSAWQGCYTLGFEQGGERVREPSRKNVSMLAVDGNSGGGVGVGVGFG
VGGQPGKSSTTAGRGGGTNSEAQQQHRGEGAGDGHHSLSLVSRPLLQMGK
ISEDHFSLDFCWPLSPLQAFVAAMSIFDG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000007Tubby_C
IPR025659Tubby-like_C