mRNA_P-littoralis_Contig6.309.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig6.309.1 vs. uniprot
Match: A0A6H5J952_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J952_9PHAE) HSP 1 Score: 211 bits (538), Expect = 7.030e-59 Identity = 98/121 (80.99%), Postives = 105/121 (86.78%), Query Frame = 1
Query: 1108 AATSHFKGCHDGIGGVAKNAMRRRERFGKRIMGADGVVCFLKSFFREKACGEGEDGMRKYFATWSPYRMRKVHVEFIGKKDIYRPNSTLEGIDGTRDMYHFVGANTASPHAQTTTEGLEDD 1470
AATSHFKGCHDGIGGVAKNAM+RRERFGKRIMGADGVV FL+SFFREKA EGE+GMRKYFA WSPYRMR+VHVEFIGKK++YRPNS L G +GTRDMYHF GANT TTTEG DD
Sbjct: 162 AATSHFKGCHDGIGGVAKNAMKRRERFGKRIMGADGVVSFLRSFFREKAGSEGEEGMRKYFAKWSPYRMRRVHVEFIGKKEMYRPNSVLAGTEGTRDMYHFAGANTPKWDGSTTTEGRVDD 282
BLAST of mRNA_P-littoralis_Contig6.309.1 vs. uniprot
Match: A0A6H5JQG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQG9_9PHAE) HSP 1 Score: 212 bits (539), Expect = 2.150e-58 Identity = 99/130 (76.15%), Postives = 113/130 (86.92%), Query Frame = 1
Query: 1108 AATSHFKGCHDGIGGVAKNAMRRRERFGKRIMGADGVVCFLKSFFREKACGEGEDGMRKYFATWSPYRMRKVHVEFIGKKDIYRPNSTLEGIDGTRDMYHFVGANTASPHAQTTTEGLEDD-ELVLKREG 1494
AATSHFKGCHDGIGGVAKNAM+RRERFGKRIM A+GVV FL+SFFREKA EGE+GMR+YFA WSPYRMR+VHVE IGKK++YRPNS LEG++GTR+MYHF GANT T+T+G EDD +LVLK EG
Sbjct: 178 AATSHFKGCHDGIGGVAKNAMKRRERFGKRIMVANGVVSFLRSFFREKAGSEGEEGMRRYFAKWSPYRMRRVHVEIIGKKEVYRPNSILEGVEGTREMYHFAGANTPKWDGSTSTKGREDDCKLVLKSEG 307
BLAST of mRNA_P-littoralis_Contig6.309.1 vs. uniprot
Match: A0A6H5L293_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L293_9PHAE) HSP 1 Score: 218 bits (554), Expect = 8.830e-57 Identity = 102/130 (78.46%), Postives = 114/130 (87.69%), Query Frame = 1
Query: 1108 AATSHFKGCHDGIGGVAKNAMRRRERFGKRIMGADGVVCFLKSFFREKACGEGEDGMRKYFATWSPYRMRKVHVEFIGKKDIYRPNSTLEGIDGTRDMYHFVGANTASPHAQTTTEGLEDD-ELVLKREG 1494
AATSHFKGCHDGIGGVAKNAM+RRERFGKRIMGADGVV FL+SFFREKA EGE+GMR+YFA WSPYRMR+VHVEFI KK+IYRPNS LEG++GTR+MYHF GANT T+T+G EDD +LVLK EG
Sbjct: 484 AATSHFKGCHDGIGGVAKNAMKRRERFGKRIMGADGVVSFLRSFFREKAGSEGEEGMRRYFAKWSPYRMRRVHVEFISKKEIYRPNSILEGVEGTREMYHFAGANTPKWDGSTSTKGREDDCKLVLKSEG 613
BLAST of mRNA_P-littoralis_Contig6.309.1 vs. uniprot
Match: A0A6H5KGU5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGU5_9PHAE) HSP 1 Score: 217 bits (553), Expect = 1.210e-55 Identity = 202/603 (33.50%), Postives = 263/603 (43.62%), Query Frame = 3
Query: 633 DPVITALRGGGRTRSGVATATNEPDEQEIEDNWRTTKAETFIASMNSM-GASNALEFMESKGMEAVKDILRRNRELEAQARIGVSVQRAIEQAQKQHSTKEGRRTWQTLLTAVAF---GDEGESTSAKRKAATIGVREHTFNFAVDRVKRLRADLHPSEAMK----------RRH-------ISLQRLP*WHRRRGKEC--HEEEREVW*AYHGG-------------GRGGMLLEEFLSREGVRRRRGRHAEVFRD------------VVTVPHA*G-ARGVHRQE-----------------------------------GHLST--------KLY-----PGGDRRYAGHVPLCGGQHC----------------------------------VASRAN-----------------------------------HHGRTRR*RAGA----------------------QKGGGDLTIEDKSRLVELGEIKVMQDTGRWKEVEADKPV---SGEEMVVVRKVKMIYNVRTRSSSCFCSACQDSQYKDCHVHRAYPGLVSAMRNGEVKETVIMDTGTAPVDGGPLTEITFGPRKKLCEMARV 1868
DPVI ALRGGGRTRSGV T +PDEQE AE+F+A +NS +S+ALEF+ SKG++A K++ RR REL+ AR+G S++RAIEQAQKQ ST +G RTWQTLLTA AF +EG SA+R AA I VR +FNFAV R K+L D+ P+EA+K +R +SL R WH + +R++W + G G + +FL R + R F D +T+P A +H Q+ HL T K+ P + + G P C C V + A+ HH + GA ++ GG T E++SRL LG ++VMQ +GRWK VE PV SGEE+VVVRK ++ +RTR +SCFCSACQ QY+DC+V+RAYP LV MR G+VKETVIMDTG A G ITF R+ C +RV
Sbjct: 120 DPVIVALRGGGRTRSGVETG--KPDEQE--------DAESFLAFLNSKESSSDALEFLASKGLDAAKEVRRRIRELDVLARVGASLKRAIEQAQKQRSTSDGHRTWQTLLTAAAFMVEDEEGSQLSAQRTAAAINVRRQSFNFAVGRAKKLNPDVRPTEALKDGVYWFSPRAKRSDAASDELVSLMRQY-WHTDEVSRASGNSADRDMWISSKSPNAERHPRRQLIEVGGGDAVYAKFLKWADYRSFKSRQGPEFTDPGRTLFLSTRCKCLTLPVMEQCACKIHSQQVLYIEALANVDMASHGDCSCRWCTVDGGSKWRETWKHLGTFSDAIACPKVNLRAEDPEDNVGFMGRKPECSAFKCKECGFGGAKGIPTCTRLETSQKTVEWKEFEDVITVPASADGKIKAKKLANQTIPKEGRLCDLWKAFKQDSKLYMAHHATAKHHFVGANTPRNDAQTTTEDPEDIKLALKREEGGRSTGEEESRLAGLGGVRVMQVSGRWKGVEGSGPVEPMSGEEVVVVRKETRVHMLRTRLASCFCSACQRFQYEDCYVNRAYPDLVPPMREGKVKETVIMDTGVALESEGK-AGITFRSRQSTCMKSRV 710
BLAST of mRNA_P-littoralis_Contig6.309.1 vs. uniprot
Match: A0A6H5JFY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFY7_9PHAE) HSP 1 Score: 200 bits (508), Expect = 5.590e-55 Identity = 98/130 (75.38%), Postives = 110/130 (84.62%), Query Frame = 1
Query: 1108 AATSHFKGCHDGIGGVAKNAMRRRERFGKRIMGADGVVCFLKSFFREKACGEGEDGMRKYFATWSPYRMRKVHVEFIGKKDIYRPNSTLEGIDGTRDMYHFVGANTASPHAQTTTEGLEDD-ELVLKREG 1494
AATSHF G GIGGVAKNAM+RRERFGKRIMGADGVV FL+SFFREKA EGE+GMR+YFA WSPY MR+VHVEFIGKK+IYRPNS LEG++GTR+MYHF GANT T+T+G EDD +LVLK EG
Sbjct: 106 AATSHFNG--GGIGGVAKNAMKRRERFGKRIMGADGVVRFLRSFFREKAGSEGEEGMRRYFAKWSPYPMRRVHVEFIGKKEIYRPNSILEGVEGTREMYHFAGANTPEWDGSTSTKGREDDCKLVLKSEG 233
BLAST of mRNA_P-littoralis_Contig6.309.1 vs. uniprot
Match: A0A6H5JLE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLE6_9PHAE) HSP 1 Score: 207 bits (526), Expect = 6.940e-55 Identity = 95/127 (74.80%), Postives = 106/127 (83.46%), Query Frame = 1
Query: 1108 AATSHFKGCHDGIGGVAKNAMRRRERFGKRIMGADGVVCFLKSFFREKACGEGEDGMRKYFATWSPYRMRKVHVEFIGKKDIYRPNSTLEGIDGTRDMYHFVGANTASPHAQTTTEGLEDDELVLKR 1488
AATSHFKGCHDGIGGVAKNAM+RRERFGKRIMGADGVV F + FFREKA EGE+GMRKYFA WSPYRMR+VHVEFIG K+I RPNS L G++GT DMYHF GAN TTTEGLEDD ++++
Sbjct: 189 AATSHFKGCHDGIGGVAKNAMKRRERFGKRIMGADGVVSFWRCFFREKAGSEGEEGMRKYFAKWSPYRMRRVHVEFIGNKEISRPNSVLAGLEGTLDMYHFAGANNPKWDGSTTTEGLEDDRKLVRK 315
BLAST of mRNA_P-littoralis_Contig6.309.1 vs. uniprot
Match: A0A6H5L2L6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L6_9PHAE) HSP 1 Score: 211 bits (538), Expect = 1.070e-54 Identity = 102/130 (78.46%), Postives = 110/130 (84.62%), Query Frame = 1
Query: 1108 AATSHFKGCHDGIGGVAKNAMRRRERFGKRIMGADGVVCFLKSFFREKACGEGEDGMRKYFATWSPYRMRKVHVEFIGKKDIYRPNSTLEGIDGTRDMYHFVGANTASPHAQTTTEGLEDD-ELVLKREG 1494
A TSHFKGCHDGIGGVAKNAM+RRE F KRIMGADGVV FL+SFFREKA EG +GMRKYFA WSPYRMR+VHVE IGKK+IYRPNS L GI+GTRDMYHF GANT TTTEGLE+D +LV KREG
Sbjct: 450 AVTSHFKGCHDGIGGVAKNAMKRREIFDKRIMGADGVVSFLRSFFREKAGSEGGEGMRKYFAKWSPYRMRRVHVECIGKKEIYRPNSVLAGIEGTRDMYHFAGANTPKWDGSTTTEGLENDCKLVRKREG 579
BLAST of mRNA_P-littoralis_Contig6.309.1 vs. uniprot
Match: A0A6H5KI10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI10_9PHAE) HSP 1 Score: 212 bits (540), Expect = 4.530e-54 Identity = 100/130 (76.92%), Postives = 111/130 (85.38%), Query Frame = 1
Query: 1108 AATSHFKGCHDGIGGVAKNAMRRRERFGKRIMGADGVVCFLKSFFREKACGEGEDGMRKYFATWSPYRMRKVHVEFIGKKDIYRPNSTLEGIDGTRDMYHFVGANTASPHAQTTTEGLEDD-ELVLKREG 1494
AATSHFKGCHDGIGGVAKNAM+RRERFGKRIMGADGV FL+SFF EKA EGE+GMR+YFA WSPYRMR+VH EFIGKK+IYRPNS LEG++GTR+MYHF GANT TTTEGLE +LVL+ EG
Sbjct: 656 AATSHFKGCHDGIGGVAKNAMKRRERFGKRIMGADGVFSFLRSFFEEKAGSEGEEGMRRYFAKWSPYRMRRVHFEFIGKKEIYRPNSILEGVEGTREMYHFAGANTPKWDGSTTTEGLEGYCKLVLRSEG 785
BLAST of mRNA_P-littoralis_Contig6.309.1 vs. uniprot
Match: A0A6H5L7F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F4_9PHAE) HSP 1 Score: 197 bits (501), Expect = 4.490e-53 Identity = 90/121 (74.38%), Postives = 103/121 (85.12%), Query Frame = 1
Query: 1108 AATSHFKGCHDGIGGVAKNAMRRRERFGKRIMGADGVVCFLKSFFREKACGEGEDGMRKYFATWSPYRMRKVHVEFIGKKDIYRPNSTLEGIDGTRDMYHFVGANTASPHAQTTTEGLEDD 1470
AATSHFK CHDGIGGVAKNAM+RRERF KRIMGADGVV FL+SFFREKA EGE+GMR++FA WSPYRMR+VHVEF+GKK+IYRPNS LEG++GTR+MYH G NT T+T+G DD
Sbjct: 210 AATSHFKDCHDGIGGVAKNAMKRRERFVKRIMGADGVVSFLRSFFREKAGSEGEEGMRRFFARWSPYRMRRVHVEFMGKKEIYRPNSILEGVEGTREMYHLAGPNTPEWDGSTSTKGRGDD 330
BLAST of mRNA_P-littoralis_Contig6.309.1 vs. uniprot
Match: A0A6H5KLE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLE4_9PHAE) HSP 1 Score: 179 bits (455), Expect = 1.580e-47 Identity = 88/166 (53.01%), Postives = 112/166 (67.47%), Query Frame = 3
Query: 1485 KGGGDLTIEDKSRLVELGEIKVMQDTGRWKEVEADKPVSGEEMVVVRKVKMIYNVRTRSSSCFCSACQDSQYKDCHVHRAYPGLVSAMRNGEVKETVIMDTGTAPVDGGPLTEITFGPRKKLCEMARVTGTQWHQSDSTAAFKLWEELGTVEQPTLISRFGRWAGF 1982
+G G L+ ++KSRL E + + + K E PVSGEE V RKVK Y +RTR +SCFCSACQ +Y+ C+V + YP LV A++ GEVKETVIMDTG APVD I FG R+K C+M R+TGT W + +S AA K+WEELG E+P + +RFGRWAGF
Sbjct: 97 EGRGSLSSQEKSRLREFKVLGAVASRWKGKGAELHHPVSGEEDVTCRKVKRTYRLRTRLASCFCSACQRCEYEQCYVSKTYPRLVPALQKGEVKETVIMDTGVAPVDEDNSRGIQFGSRRKECKMKRITGTHWQECESAAASKIWEELGRKEEPNIFARFGRWAGF 262 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig6.309.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig6.309.1 >prot_P-littoralis_Contig6.309.1 ID=prot_P-littoralis_Contig6.309.1|Name=mRNA_P-littoralis_Contig6.309.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=164bp MNSAGAGSAAPVTKPGNCERIVFIGKDKHVIKHTWRLSAARGEVLLTTALback to top mRNA from alignment at P-littoralis_Contig6:1268159..1271054+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig6.309.1 ID=mRNA_P-littoralis_Contig6.309.1|Name=mRNA_P-littoralis_Contig6.309.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2896bp|location=Sequence derived from alignment at P-littoralis_Contig6:1268159..1271054+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig6:1268159..1271054+ >mRNA_P-littoralis_Contig6.309.1 ID=mRNA_P-littoralis_Contig6.309.1|Name=mRNA_P-littoralis_Contig6.309.1|organism=Pylaiella littoralis U1_48|type=CDS|length=492bp|location=Sequence derived from alignment at P-littoralis_Contig6:1268159..1271054+ (Pylaiella littoralis U1_48)back to top |