prot_P-littoralis_Contig6.300.5 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig6.300.5
Unique Nameprot_P-littoralis_Contig6.300.5
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length453
Homology
BLAST of mRNA_P-littoralis_Contig6.300.5 vs. uniprot
Match: D7FIK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK2_ECTSI)

HSP 1 Score: 422 bits (1084), Expect = 7.890e-142
Identity = 268/395 (67.85%), Postives = 291/395 (73.67%), Query Frame = 0
Query:    3 YDVGERIRVTVGPGKTCRGLILCIGSSN-GGPAYDVLLQSPDRACEAVAGATT--SINVDRRKETKKQERCTGTAAXXXXXXXADANAGRELTALPASDLSNLQPFELDESEEDGNDTDGNGKSRAPAGEGVEVSVLAETLKNRGNTLFKLGDTDAAAEWFCNVLRTLEHTPVVGATVLVRMAPVPATATLYRSGMVSDANDDGGSPPLPLSYDVIYDETD----DXXXXXXXXXXXXXXXXXGVEADRVLGVPSSPCVWCAARLNLARCSFRRGKQEEVVEACTLVLSLARLTMAEKKRSRDERAKLRAHCMTALRMRGGSHLAQHRVGLARKDARSMVRSSGDNEESRTQAARFEAEVERKAKALLKANRKLAKDVTQWVDASMTKHEACLMK 390
            + VGER+RV+ GPGK+CRGLILC+GS+  G P YDVLLQSPD    A+A A++  SI  D R+E    E                    RELT L AS LS LQPFELD+S ED             A    EV + AE LK+ GNTLFKLGDTDAAAE F  VLRTLE  PVVGATVLVR+ P  AT+T YRSGMVSDAN+D G  P P +YDVIYDET      XXXXXXXXXXXXXXXX GV  DRVLGVP SPCVWCAARLNLARCSFRRG+ EEVVEACTLVLSLARLTM +KKR R+ERAKLRAHC+TALRMRGGSHLAQH VG ARKDARSMVRSSGD EESR QA RFEAEVERKAK LLK NRKLAKDVT+WVDASM KHE   +K
Sbjct:    2 HSVGERVRVSTGPGKSCRGLILCVGSTEEGNPTYDVLLQSPDPTSTAIATASSPSSITADARQEEDATE--------------------RELTGLSASSLSTLQPFELDQSTED-----------IQAVAEAEVVLAAERLKDGGNTLFKLGDTDAAAEMFARVLRTLERAPVVGATVLVRV-PNGATSTCYRSGMVSDANEDDG--PCP-TYDVIYDETAVKSAXXXXXXXXXXXXXXXXXDGVSPDRVLGVPLSPCVWCAARLNLARCSFRRGRHEEVVEACTLVLSLARLTMGQKKRPREERAKLRAHCLTALRMRGGSHLAQHHVGQARKDARSMVRSSGD-EESRAQATRFEAEVERKAKTLLKTNRKLAKDVTRWVDASMAKHEEGCLK 360          
BLAST of mRNA_P-littoralis_Contig6.300.5 vs. uniprot
Match: A0A6H5KE72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE72_9PHAE)

HSP 1 Score: 339 bits (869), Expect = 5.580e-111
Identity = 217/337 (64.39%), Postives = 240/337 (71.22%), Query Frame = 0
Query:    3 YDVGERIRVTVGPGKTCRGLILCIGSSNG-GPAYDVLLQSPDRACEAVAGATT--SINVDRRKETKKQERCTGTAAXXXXXXXADANAGRELTALPASDLSNLQPFELDESEEDGNDTDGNGKSRAPAGEGVEVSVLAETLKNRGNTLFKLGDTDAAAEWFCNVLRTLEHTPVVGATVLVRMAPVPATATLYRSGMVSDANDDGGSPPLPLSYDVIYDE----TDDXXXXXXXXXXXXXXXXXGVEADRVLGVPSSPCVWCAARLNLARCSFRRGKQEEVVEACTLVLSLARLTMAEKKRSRDERAKLRAHCMTALRMRGGSHLAQHRVGLARKDAR 332
            + VGER+RV+ GPGK+CRGLILC+GS+    P YDVLLQSPD    A+A A++  SI  D R+E   +                     RELT L AS LS LQPFELD+S ED             A   VEV++  E LK+ GNTLFKLGDTDAAAE F   LRTLE  PVVGATVLVR+ P  ATAT YRSGMVSDAN+  G  P P +YDVIYDE    +  XXXXXXXXXXXXXXXX GV  DRVLGVP SPCVWCAARLNLARCSFRRG+ EEVVEACTLVLSLARLTM +KKR R+ERAKLRAHC+TALRMRGGSHLAQH VG ARKDAR
Sbjct:    2 HSVGERVRVSTGPGKSCRGLILCVGSTQEENPTYDVLLQSPDPTSTAIATASSPSSITADARQEDATE---------------------RELTGLSASSLSALQPFELDQSTED-----------IEAVAEVEVALAGERLKDGGNTLFKLGDTDAAAEMFARALRTLERAPVVGATVLVRVLPNGATATRYRSGMVSDANE--GDGPCP-TYDVIYDEAAVKSAXXXXXXXXXXXXXXXXXDGVSPDRVLGVPLSPCVWCAARLNLARCSFRRGRHEEVVEACTLVLSLARLTMGQKKRPREERAKLRAHCLTALRMRGGSHLAQHHVGQARKDAR 303          
BLAST of mRNA_P-littoralis_Contig6.300.5 vs. uniprot
Match: A0A835YM35_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM35_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.190e-16
Identity = 77/261 (29.50%), Postives = 131/261 (50.19%), Query Frame = 0
Query:  131 VEVSVLAETLKNRGNTLFKLGDTDAAAEWFCNVLRTLEHTPVVGATVLVRMAPVPATATLYRSGMVSDANDDGGSPPLPLSYDVIYDETDDXXXXXXXXXXXXXXXXXGVEADRVLGVPSSPCVWCAARLNLARCSFRRGK----QEEVVEACTLVLSLARLTMAEKKRSRDERAKLRAHCMTALRMRGGSHLAQHRVGLARKDARSMVRSS--GDNEESRTQAARFEAEVERKAKALLKANRKLAKDVTQWVDASMTKHE 385
             +++ L E L+  G  LF L D +AA + +   L+ L     +G+ VLV +        + R+GM+S  + + G+       DVI+DE D+                  V A RVL +   P       +N A+C+ + G     +E VV   T  L L +  +A      + R +L A C+ AL +R  +HLA  RV  A +DA++M +++  G ++ +   A R  +E++R  +ALL+ +R+LA++V  WV+AS+ +H+
Sbjct:   70 ADLTTLVERLQGFGKQLFLLPDYEAAGDVYELALQHLTPPLTIGSEVLVPLDD----GRVCRAGMISAMSSETGT------VDVIFDEEDEHGVDEEE----------AVAASRVLRLSLLPLQHVTMLVNSAKCAAKAGSTQDARERVVSLSTRALVLGKHYLATAPAG-EARRRLHALCLNALHLRARAHLAAARVKPALRDAQAMRKAAAGGADDAAARAAERLVSEIKRAERALLRGDRRLAREVGAWVEASLKRHD 309          
BLAST of mRNA_P-littoralis_Contig6.300.5 vs. uniprot
Match: A0A8J2SCK9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SCK9_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 5.840e-10
Identity = 72/247 (29.15%), Postives = 109/247 (44.13%), Query Frame = 0
Query:  137 AETLKNRGNTLFKLGDTDAAAEWFCNVLRTLEHTPVVGATVLVRMAPVPATATLYRSGMVSDANDDGGSPPLPLSYDVIYDETDDXXXXXXXXXXXXXXXXXGVEADRVLGVPSSPCVWCAARLNLARCSFRRGKQEEVVEACTLVLSLARLTMAEKKRSRDERAKLRAHCMTALRMRGGSHLAQHRVGLARKDARSMVRSSGDNEESRTQAARFEAEVERKAKALLKANRKLAKDVTQWVDASMTK 383
            A  LK RGN LF   D   AA  +   L+ L+  P  GA VL+      A + L R G +SD +    +  + + YD   DE D                   ++  RV+ V +   + C+  LNLA+C  +  +  +   A TL   LA  T         E  K R  C   + +RG ++LAQ ++  A +DA   +  +  +      A   + + ER  K  L+ N+KLAK+VTQWV+ +  K
Sbjct:  104 ASELKRRGNALFGEKDWVNAAAHYERALKVLKRPPTTGARVLIN-----ANSQL-RCGTLSDVS----TKTVDVMYDDGVDEDD-------------------LDRRRVILVVNDAELQCSLYLNLAKCGLKVNRLRDSTSAATLAGGLANST---------EELKARFLCSARV-VRGRANLAQKKLRHALRDADVALELNASD----AGALALKRDAERAKKLALRENKKLAKEVTQWVETAQGK 307          
BLAST of mRNA_P-littoralis_Contig6.300.5 vs. uniprot
Match: F0Y769_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y769_AURAN)

HSP 1 Score: 65.5 bits (158), Expect = 1.350e-7
Identity = 76/266 (28.57%), Postives = 111/266 (41.73%), Query Frame = 0
Query:  125 APAGEGVEVSVLAETLKNRGNTLFKLGDTDAAAEWFCNVLRTLEHTPVVGATVLVRMAPVPATATLYRSGMVSDANDDGGSPPLPLSYDVIYD---ETDDXXXXXXXXXXXXXXXXXGVEADRVLGV----PSSPCVWCAARLNLARCSFRRGKQEEVVEACTLVLSLARLTMAEKKRSRDERAKLRAHCMTALRMRGGSHLAQHRVGLARKDARSMVRSSGDNEESRTQAARFEAEVERKAKALLKANRKLAKDVTQWVDASMTK 383
            APA + VE    A   K RG+ LF+  D  AA+  +   L  L+    +G   LV +    A     R G VS  +DD        + DV+YD   E DD                  +   R+L V    P    +     LNLARC+ R  + ++ V  CTL   +A           DE   L  H +T   +R  +HL Q  +  A +DA+    ++ D   +         +VE   K  L+ N+KLAK+VT WV+++  K
Sbjct:  683 APAKDSVEA---AGECKARGSRLFQAKDYVAASGHYKAALGVLKRLYPLGVGALVEVNSNGA----LRVGTVSGVDDD------EKTVDVMYDDGGEDDDE-----------------ISRKRILAVVAPKPEGRAIQLTTYLNLARCATRADRAKDAVSCCTLAGGIAAF---------DEL--LEHHLVTTKILRARAHLQQKHLKQALRDAK----AAADLAPADKNVVALNRDVEAAKKRALRENKKLAKEVTAWVESAQGK 903          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig6.300.5 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FIK2_ECTSI7.890e-14267.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KE72_9PHAE5.580e-11164.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YM35_9STRA1.190e-1629.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J2SCK9_9STRA5.840e-1029.15Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0Y769_AURAN1.350e-728.57Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 341..368
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 198..243
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 416..431
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 388..452
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 256..289
e-value: 37.0
score: 9.9
coord: 137..170
e-value: 0.14
score: 21.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 134..376
e-value: 1.9E-12
score: 49.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 137..362

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig6contigP-littoralis_Contig6:1244034..1248484 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig6.300.5mRNA_P-littoralis_Contig6.300.5Pylaiella littoralis U1_48mRNAP-littoralis_Contig6 1243989..1248569 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig6.300.5 ID=prot_P-littoralis_Contig6.300.5|Name=mRNA_P-littoralis_Contig6.300.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=453bp
MPYDVGERIRVTVGPGKTCRGLILCIGSSNGGPAYDVLLQSPDRACEAVA
GATTSINVDRRKETKKQERCTGTAAAAAAAVAADANAGRELTALPASDLS
NLQPFELDESEEDGNDTDGNGKSRAPAGEGVEVSVLAETLKNRGNTLFKL
GDTDAAAEWFCNVLRTLEHTPVVGATVLVRMAPVPATATLYRSGMVSDAN
DDGGSPPLPLSYDVIYDETDDSGGSKGEQQGEEDDEEDGVEADRVLGVPS
SPCVWCAARLNLARCSFRRGKQEEVVEACTLVLSLARLTMAEKKRSRDER
AKLRAHCMTALRMRGGSHLAQHRVGLARKDARSMVRSSGDNEESRTQAAR
FEAEVERKAKALLKANRKLAKDVTQWVDASMTKHEACLMKQRKGGGDDEA
LPAPAPPSAGEQSSEDGGEHTYDDDGGVEETKGAGKGAGDGGVKSWLGGW
IR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf