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Homology
BLAST of mRNA_P-littoralis_Contig6.295.3 vs. uniprot
Match: A0A6H5KF35_9PHAE (ERCC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF35_9PHAE) HSP 1 Score: 644 bits (1662), Expect = 1.670e-206 Identity = 407/889 (45.78%), Postives = 474/889 (53.32%), Query Frame = 3
Query: 63 MAPNWQLDPRTLAFLVTKPPPDLWEDVSLVHGRCNRHWGLIRGLIEDQKKARKNKFSPSARLNATLFREVVTRLSLSLEAVDTKDKFNSTAGVGEVKLKVSGKHLEGQTSARNPKHLPPAKTFVGSAPAILVAMRREGNRRDADGDVWLTEDEIRVLAAPLSEEDLSHRADEIILGEVENFAWCSMAHLLNDAKFDCVKKKAFDEKTTIARLEELGRRPKCVSSGCDAFATKSAGEMSDRVQLATFRRSLFCKEHY---GGXXXXXXXXXXXXXXXXXXXXSTACDPVVLDDTDLSAPLGGAXXXXXXXXXXXXXXTSGTGKIKAGWYRKLLGDALLSSELDRLEGLKGREVVQKLHKPWRNDFAKRATNLYALTTNGKWMADKLEKALA------LTDGLQNGT------------------------------------------------------------------------------PATAAN----------------------------------------------PILNRSS--------------------------YASFSERDGGXXXXTAASLHNGHSPLAPTRAFGAAKPGVRLLIDNREKRGATKNSQISELTGFLNSRRVPYEMREWKVGDYGWVVQPDAGNRPAAGEVGYEREFVVPRLLERKRVDDLAESMKDGRLGRQKREMLRAKAEGLVSEIEIHVEGGTHERCYMDDIYRRGLTPDDLDEALDQSEEHGFKVVHHSNFAEFGAYLADTTVALQRQFDAKTLQFEKFAIWERFVRFRKGQMPLAAAAKLAHGG--------------RRGRPPAAXXXXXXXXXXXXXXXXLXXXXXXXXXXGLRQRKLPESFGVTTKSGDADAGAG 2210
M +W LDPR LAF +TKPPP WEDVS VHGRC+RHWGLIRGLIE+QKKARKN+ S SARL ATLFREVV RLSLSLEAVDTKDKF+ T GVGE+ +ARNPKH P KTFV SA AILVAMR + + GEVENFAWCSMA+L N KFDCV KK DEK T+A+L+ELG RP C S GC+A+ATK G++S+RV+ ATF RS++C EHY GG XX ACDP+ LD+ DLS PL G GKIKAGWYR+LLG+ALL EL R+E KG +V L WR +F K A +Y+LT NG+WMA +LE+A+ + G N T P T +N P RS YAS SERDG XXXXTAAS NGHSPLAPTRA GAAKPGVRLLIDNREKRG T NSQIS LT +LNSR VPYE+REWK+GDYGWVVQPDAG PAAGEVGYEREFVVPRLLERKRVDDLAESMKDGRL RQK+ MLRAK+EG+ +E+E+HVEG T + ++D+IYRRGLTP+DLDEAL Q+E GFKVV H++FA F AYLAD T +LQ QF+A++L FE F W+ +RF KGQ+P+ + RRGRPP + GLRQR L +FGV + D G+G
Sbjct: 1 MDSDWALDPRMLAFPITKPPPTRWEDVSCVHGRCSRHWGLIRGLIEEQKKARKNRGSSSARLTATLFREVVARLSLSLEAVDTKDKFSCTPGVGEM------------VTARNPKHQPSNKTFVASAAAILVAMR------------------------------FPEFSPDTPTGEVENFAWCSMAYLTNHNKFDCVAKKDLDEKATVAQLQELGERPICSSPGCNAYATKRMGDLSERVKPATFLRSVYCDEHYTEMGGGXXKRKKAAGKDKGKS----GKACDPMALDELDLS-PLESDRNAAGSAHDPPPSPPKG-GKIKAGWYRRLLGEALLKVELHRVEKWKGPDVANGLTALWRKEFVKNAKTIYSLTPNGEWMATRLERAIGEGPGSGASSGNVNATTFDLAPLQWWDGAVCRVFAGPGYVSEGMNQKLAIILSFAGEGGDRGVGAKCISLETWSLLLGRGPLSDWGMHIRSSDCPKTCSNCHAVVKSRAEAHQYQESYGNFVFCTWRGGGGGRPWSDRRKPVRPSDPKKTRSDCDRSLPPYSCHRPVNITDDKDNDNDRYASCSERDGXXXXXTAASTRNGHSPLAPTRANGAAKPGVRLLIDNREKRGVTSNSQISHLTNYLNSRGVPYEVREWKIGDYGWVVQPDAGKPPAAGEVGYEREFVVPRLLERKRVDDLAESMKDGRLVRQKKAMLRAKSEGVAAEVEVHVEGDTADGRFVDEIYRRGLTPEDLDEALRQAETQGFKVVRHNDFASFSAYLADATQSLQIQFEARSLDFESFFTWQNLIRFSKGQVPVTPTSAXXXXXXXXXXXXXXXXXXXRRGRPPTSAVAGGCGRPPLASRPACG---------GLRQRTLDGAFGVARRGEDIARGSG 832
BLAST of mRNA_P-littoralis_Contig6.295.3 vs. uniprot
Match: D7FIK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK4_ECTSI) HSP 1 Score: 520 bits (1339), Expect = 2.860e-168 Identity = 300/490 (61.22%), Postives = 340/490 (69.39%), Query Frame = 3
Query: 63 MAPNWQLDPRTLAFLVTKPPPDLWEDVSLVHGRCNRHWGLIRGLIEDQKKARKNKFSPSARLNATLFREVVTRLSLSLEAVDTKDKFNSTAGVGEVKLKVSGKHLEGQTSARNPKHLPPAKTFVGSAPAILVAMRREGNRRDADGDV------------------WLTEDEIRVLAAPLSEEDLSHRADEIILGEVENFAWCSMAHLLNDAKFDCVKKKAFDEKTTIARLEELGRRPKCVSSGCDAFATKSAGEMSDRVQLATFRRSLFCKEHY---GGXXXXXXXXXXXXXXXXXXXXSTACDPVVLDDTDLSAPLGGAXXXXXXXXXXXXXXTSGTGKIKAGWYRKLLGDALLSSELDRLEGLKGREVVQKLHKPWRNDFAKRATNLYALTTNGKWMADKLEKALALTDG----LQNGTPATAANPILNRSSYASFSERDGGXXXXTAASLHNGHSPLAPTRAFGAAKPGVRLLIDNREKRGATKNSQ 1457
MA +W LDPR LAF +TKPPP WEDVS VHGRC+RHWGLIRGL+E+QKKARKN+ S SARL ATLFREVV RLSLSLEAVDTKDKF+ T GVGE+ K+ KHL Q +ARNPKH P KTFV SA AILVAM RE RR DV W TE EIR LAAPL EEDL+HR DEI+LGEVENFAWCSMA+L N KFDCV +K DEK TIA+L+ELG RP C S GC+A+ATKS G++S+RV+ ATF RS++C EH+ GG XXXXXXXX S ACDP+ L + DLS PLGG G GKIKAGWYR+LLG+ALL EL R+E KG + L WR +FAK A +Y+LT NG+WMA +LE+A+ G A+PILNRSSYAS SERDG XXXXTAAS HNGHSPLAPTRA GAAKPGVRLLIDNRE+RG T NSQ
Sbjct: 1 MASDWALDPRMLAFPITKPPPTRWEDVSCVHGRCSRHWGLIRGLMEEQKKARKNRGSSSARLTATLFREVVARLSLSLEAVDTKDKFSCTPGVGEMIQKMGAKHLAAQVTARNPKHQPSNKTFVASAAAILVAMSREVKRRATVVDVTSESNGGKGPPAAAAPAAWFTEKEIRRLAAPLCEEDLTHRGDEIVLGEVENFAWCSMAYLTNHNKFDCVARKDLDEKATIAQLQELGERPICSSPGCNAYATKSMGDLSERVKTATFLRSVYCDEHFKEMGGGXXXXXXXXGKGKGKS----SKACDPMALHELDLS-PLGGDYKAAPSAHDPPPSPPKG-GKIKAGWYRRLLGEALLKVELHRVEKWKGPDAANGLTALWRKEFAKNAKTIYSLTPNGEWMATRLERAIGEGPGSXXXXXXXXXXXTASPILNRSSYASCSERDGXXXXXTAASTHNGHSPLAPTRANGAAKPGVRLLIDNRERRGVTSNSQ 484
BLAST of mRNA_P-littoralis_Contig6.295.3 vs. uniprot
Match: D7FIK5_ECTSI (ERCC4 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK5_ECTSI) HSP 1 Score: 152 bits (385), Expect = 4.450e-35 Identity = 72/116 (62.07%), Postives = 94/116 (81.03%), Query Frame = 3
Query: 1653 MKDGRLGRQKREMLRAKAEGLVSEIEIHVEGGTHERCYMDDIYRRGLTPDDLDEALDQSEEHGFKVVHHSNFAEFGAYLADTTVALQRQFDAKTLQFEKFAIWERFVRFRKGQMPL 2000
MKDGRL RQK+ MLRAK++G+ +E+E+HVEG T + ++D+IYRRGLTP+DLDEAL Q+E GFKVV H++FA F AYLAD T +LQRQF+A++L FE F W+ +RF KGQ+PL
Sbjct: 1 MKDGRLVRQKKAMLRAKSDGVAAEVEVHVEGDTADGRFVDEIYRRGLTPEDLDEALRQAETQGFKVVRHNDFAAFSAYLADATQSLQRQFEARSLDFESFFTWQNLIRFSKGQVPL 116
BLAST of mRNA_P-littoralis_Contig6.295.3 vs. uniprot
Match: B3MYD5_DROAN (ERCC4 domain-containing protein n=3 Tax=ananassae subgroup TaxID=32347 RepID=B3MYD5_DROAN) HSP 1 Score: 83.2 bits (204), Expect = 9.330e-13 Identity = 63/181 (34.81%), Postives = 93/181 (51.38%), Query Frame = 3
Query: 1404 VRLLIDNREKRGATKNSQISELT-GFLNSRRVPYEMREWKVGDYGWVVQPDAGNRPAAGEVGYEREFVVPRLLERKRVDDLAESMKDGRLGRQKREMLRAKAEGLVSEIEIHVEGGTHERCYMDDIYRRGLTPDDLDEALDQSE-EHGFKVVHHSNFAEFGAYLADTTVALQRQFDAKTLQ 1940
+ LL+D +E G KN ++ + T +L S +E+R +GD+ W+ + AGN E V+P ++ERKR+DDLA S++DGR QK R K GL I + + G +E+ GL D L +AL + + G +VV N +YLA T +LQ+ F KTLQ
Sbjct: 158 ILLLVDTQETSG--KNKRVLDQTRSYLESFGAKHEVRRLTIGDFLWIAKDRAGN-----------ELVLPYIIERKRMDDLASSIRDGRFHEQKH---RLKQSGLRHVIYLVEDYGDNEQL--------GLPLDSLQQALANARVQTGVQVVRTENHYRSMSYLASMTRSLQQIFARKTLQ 314
BLAST of mRNA_P-littoralis_Contig6.295.3 vs. uniprot
Match: A0A7J7A8U9_9COLE (ERCC4 domain-containing protein n=1 Tax=Abscondita terminalis TaxID=2069292 RepID=A0A7J7A8U9_9COLE) HSP 1 Score: 83.6 bits (205), Expect = 1.230e-12 Identity = 73/276 (26.45%), Postives = 123/276 (44.57%), Query Frame = 3
Query: 1167 YALTTNGKWMADKLEKALA-----------------LTDGLQNGTPATAANPILNRSS--YASFSERDGGXXXXTAASLHNGHSPLAPTRAFGAAKPGVRLLIDNREKRGATKNSQISELTGFLNSRRVPYEMREWKVGDYGWVVQPDAGNRPAAGEVGYEREFVVPRLLERKRVDDLAESMKDGRLGRQKREMLRAKAEGLVSEIEIHVEGGTHERCYMDDIYRRGLTPDDLDEALDQSEEHGFKVVHHSNFAEFGAYLADTTVALQRQFDAKTL 1937
Y+LT G +A KL K L + +N A NP +N++ + ++ ++ + + P R+F + LL+D +E G++K++ L LN +V +E+R KVGDY W+ + E ++E V+P ++ERKR+DDLA S+KDGR QK + + E L+ IE + TH + ++Y+ A + + F + S+ YL++ T L+R F+ KTL
Sbjct: 182 YSLTNEGTALAQKLYKKTQGEYEEIHNLPSTSRQDNLGENNKNKAAAHKENPKVNKNKNKIKKLPSSEDNLDSQSSVTVSQDETFVFPPRSFD-----IILLVDKQEMTGSSKSND-DPLLDELNHLKVMFELRHLKVGDYTWICR----------ETTSKQELVLPYIIERKRMDDLASSIKDGRFHEQKFRLKQCGMENLIYLIECYGTN-THVGLPISNLYQA---------ATNTLVQDNFSIKFTSDLRNTVEYLSNLTAILRRLFENKTL 431
BLAST of mRNA_P-littoralis_Contig6.295.3 vs. uniprot
Match: A0A7R9HJ74_9NEOP (Hypothetical protein n=1 Tax=Timema monikensis TaxID=170555 RepID=A0A7R9HJ74_9NEOP) HSP 1 Score: 79.3 bits (194), Expect = 5.020e-12 Identity = 62/183 (33.88%), Postives = 92/183 (50.27%), Query Frame = 3
Query: 1404 VRLLIDNREKRGATKNSQ----ISELTGFLNSRRVPYEMREWKVGDYGWVVQPDAGNRPAAGEVGYEREFVVPRLLERKRVDDLAESMKDGRLGRQKREMLRAKAEGLVSEIEIHVEGGTHERCYMDDIYRRGLTPDDLDEALDQSEE-HGFKVVHHSNFAEFGAYLADTTVALQRQFDAKTL 1937
V LL+D +E G++K Q SELT F ++ +E+R KVGD+ WV + N E V+P ++ERKR+DDL++S+KDGR QK + + + L+ +E H G ++ GL L +A+ ++ GF V SN E +YLA T L F+ KTL
Sbjct: 39 VILLVDTQETSGSSKGLQNDPTFSELTNF----QIKFEVRHLKVGDFVWVCRNHDTNM----------EMVLPYIIERKRMDDLSKSIKDGRFHEQKFRLKQCGIQNLIYLVESH---GNNQHT--------GLPLATLQQAIVNTQVVDGFMVKQTSNHRESMSYLATLTRLLSNSFNDKTL 196
BLAST of mRNA_P-littoralis_Contig6.295.3 vs. uniprot
Match: UPI0007E7B1B1 (crossover junction endonuclease MUS81 n=1 Tax=Drosophila eugracilis TaxID=29029 RepID=UPI0007E7B1B1) HSP 1 Score: 80.5 bits (197), Expect = 6.630e-12 Identity = 62/178 (34.83%), Postives = 92/178 (51.69%), Query Frame = 3
Query: 1410 LLIDNREKRGATKNSQISELTG-FLNSRRVPYEMREWKVGDYGWVVQPDAGNRPAAGEVGYEREFVVPRLLERKRVDDLAESMKDGRLGRQKREMLRAKAEGLVSEIEIHVEGGTHERCYMDDIYRRGLTPDDLDEALDQSE-EHGFKVVHHSNFAEFGAYLADTTVALQRQFDAKTL 1937
LL+D +E G KN ++ + TG +L S V YE+R VGD+ WV Q GN E V+P ++ERKR+DDLA S++DGR QK R + GL I + + G +E+ GL + L +AL ++ + G +VV N +YLA + +L + F +K L
Sbjct: 155 LLVDTQETSG--KNKRVLDQTGSYLESLGVRYEVRRLTVGDFLWVAQDKQGN-----------ELVLPYIIERKRMDDLASSIRDGRFHEQKH---RLQQSGLKKIIYLVEDYGDNEQL--------GLPLESLQQALANAKVQSGVQVVRTENHYRSMSYLAGMSRSLDQIFSSKRL 308
BLAST of mRNA_P-littoralis_Contig6.295.3 vs. uniprot
Match: T1GFA5_MEGSC (ERCC4 domain-containing protein n=1 Tax=Megaselia scalaris TaxID=36166 RepID=T1GFA5_MEGSC) HSP 1 Score: 79.3 bits (194), Expect = 9.960e-12 Identity = 56/184 (30.43%), Postives = 86/184 (46.74%), Query Frame = 3
Query: 1404 VRLLIDNREKRGATKNSQISELTGFLNSRRVPYEMREWKVGDYGWVVQPDAGNRPAAGEVGYEREFVVPRLLERKRVDDLAESMKDGRLGRQKREMLRAKAEGLVSEIEIHVEGGTHERCYMDDIYRRGLTPDDLDEALDQSEEH-GFKVVHHSNFAEFGAYLADTTVALQRQFDAKTLQFEKF 1952
+ LL+D E G +K + + FL S +V YE+R VGD+ W+ + +GN EFV+P +LERKR+DDLA S+KDGR QK + + L+ IE H R GL +L +A ++ H GF++ H + Y+ + ++ + L F F
Sbjct: 133 IILLVDTAETSGKSKKD-LDDTRLFLESFKVQYEVRRLSVGDFAWICRDSSGN-----------EFVIPYILERKRMDDLAGSIKDGRYSEQKYRLKSSGIPNLIYLIEDHKNND-----------RLGLPLGNLKQAAVNTQIHSGFQIKHTRTHKDSMMYIKELPNLNKQDYVIGMLSFSDF 293
BLAST of mRNA_P-littoralis_Contig6.295.3 vs. uniprot
Match: A0A6P4J586_DROKI (crossover junction endonuclease MUS81 n=2 Tax=montium subgroup TaxID=32352 RepID=A0A6P4J586_DROKI) HSP 1 Score: 79.7 bits (195), Expect = 1.160e-11 Identity = 61/180 (33.89%), Postives = 92/180 (51.11%), Query Frame = 3
Query: 1404 VRLLIDNREKRGATKNSQISELT-GFLNSRRVPYEMREWKVGDYGWVVQPDAGNRPAAGEVGYEREFVVPRLLERKRVDDLAESMKDGRLGRQKREMLRAKAEGLVSEIEIHVEGGTHERCYMDDIYRRGLTPDDLDEALDQSE-EHGFKVVHHSNFAEFGAYLADTTVALQRQFDAKTL 1937
+ LL+D +E G KN ++ + T +L S +E+R +GD+ W+ + AGN E V+P ++ERKR+DDLA S++DGR QK R K GL I + + G +E+ GL D L +AL + ++G +VV N AYLA + +L + F KTL
Sbjct: 154 ILLLVDIQETSG--KNKRVLDQTRSYLESLGAQHEVRRLTIGDFLWIAKDPAGN-----------ELVLPYIVERKRMDDLASSIRDGRFHEQKH---RLKQSGLKHVIYLVEDYGDNEQL--------GLPLDSLQQALANARVQNGVQVVRTENHFRSMAYLASMSRSLAQIFGQKTL 309
BLAST of mRNA_P-littoralis_Contig6.295.3 vs. uniprot
Match: A0A0M4EHL8_DROBS (Mus81 n=1 Tax=Drosophila busckii TaxID=30019 RepID=A0A0M4EHL8_DROBS) HSP 1 Score: 79.3 bits (194), Expect = 1.530e-11 Identity = 58/173 (33.53%), Postives = 89/173 (51.45%), Query Frame = 3
Query: 1404 VRLLIDNREKRGATKNSQISELTGFLNSRRVPYEMREWKVGDYGWVVQPDAGNRPAAGEVGYEREFVVPRLLERKRVDDLAESMKDGRLGRQKREMLRAKAEGLVSEIEIHVEGGTHERCYMDDIYRRGLTPDDLDEALDQSEEH--GFKVVHHSNFAEFGAYLADTTVALQR 1916
+ LL+D +E G K + + G+L + +VP+E+R VGD+ W+ R AAG+ E V+P ++ERKR+DDLA S++DGR QK + + GL I + + G +E+ GL + L +AL ++ H G +VV N YLA T AL +
Sbjct: 146 ILLLVDTQETSGKHKRV-LDQTRGYLQTLQVPHEVRRLTVGDFLWIA------RNAAGD-----ELVLPYVVERKRMDDLASSIRDGRFHEQKHRLRQC---GLPQIIYLIEDYGDNEQL--------GLPLESLQQALANAQMHTPGLQVVRSENHYRSMCYLAGMTAALHQ 295
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 7217.FBpp0125310 |
| Preferred name | MUS81 |
| PFAMs | ERCC4 |
| Model size | 4062 |
| Max annot lvl | 33208|Metazoa |
| KEGG ko | ko:K08991 |
| KEGG Pathway | ko03440,ko03460,map03440,map03460 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0000075,GO:0000077,GO:0000278,GO:0000280,GO:0000712,GO:0000724,GO:0000725,GO:0000727,GO:0000737,GO:0002164,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006302,GO:0006308,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007093,GO:0007095,GO:0007127,GO:0007131,GO:0007275,GO:0007346,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009607,GO:0009719,GO:0009791,GO:0009987,GO:0010389,GO:0010564,GO:0010948,GO:0010972,GO:0016043,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0019439,GO:0019899,GO:0022402,GO:0022414,GO:0031297,GO:0031570,GO:0031572,GO:0031573,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0034655,GO:0035825,GO:0036297,GO:0040019,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044773,GO:0044774,GO:0044818,GO:0045005,GO:0045132,GO:0045786,GO:0045930,GO:0045995,GO:0046483,GO:0046700,GO:0048256,GO:0048257,GO:0048285,GO:0048476,GO:0048518,GO:0048519,GO:0048523,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051239,GO:0051240,GO:0051304,GO:0051307,GO:0051321,GO:0051716,GO:0051726,GO:0061982,GO:0065007,GO:0070013,GO:0071216,GO:0071495,GO:0071704,GO:0071840,GO:0072396,GO:0072402,GO:0072423,GO:0072429,GO:0090304,GO:0090305,GO:0098813,GO:0140013,GO:0140097,GO:1901360,GO:1901361,GO:1901575,GO:1901576,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902749,GO:1902750,GO:1903046,GO:1903047,GO:2000026 |
| Exons | 13 |
| Evalue | 1.23e-13 |
| EggNOG OGs | COG1948@1|root,KOG2379@2759|Eukaryota,39FPI@33154|Opisthokonta,3BGR6@33208|Metazoa,3CVZN@33213|Bilateria,41U8G@6656|Arthropoda,3SHUA@50557|Insecta,4517T@7147|Diptera,45SH7@7214|Drosophilidae |
| Ec32 ortholog description | ERCC4 domain containing protein |
| Ec32 ortholog | Ec-27_000090.1 |
| Description | It is involved in the biological process described with DNA metabolic process |
| Cds size | 3429 |
| COG category | L |
| BRITE | ko00000,ko00001,ko01000,ko03400 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791244.8806138-UTR-P-littoralis_Contig6:1221726..1222297 | 1680791244.8806138-UTR-P-littoralis_Contig6:1221726..1222297 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig6 1221727..1222297 - |
| 1680791245.048222-UTR-P-littoralis_Contig6:1235046..1235108 | 1680791245.048222-UTR-P-littoralis_Contig6:1235046..1235108 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig6 1235047..1235108 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791244.8945348-CDS-P-littoralis_Contig6:1222297..1223941 | 1680791244.8945348-CDS-P-littoralis_Contig6:1222297..1223941 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 1222298..1223941 - |
| 1680791244.909539-CDS-P-littoralis_Contig6:1224428..1224612 | 1680791244.909539-CDS-P-littoralis_Contig6:1224428..1224612 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 1224429..1224612 - |
| 1680791244.9222867-CDS-P-littoralis_Contig6:1224929..1225012 | 1680791244.9222867-CDS-P-littoralis_Contig6:1224929..1225012 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 1224930..1225012 - |
| 1680791244.9314137-CDS-P-littoralis_Contig6:1225568..1225691 | 1680791244.9314137-CDS-P-littoralis_Contig6:1225568..1225691 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 1225569..1225691 - |
| 1680791244.9424822-CDS-P-littoralis_Contig6:1226142..1226436 | 1680791244.9424822-CDS-P-littoralis_Contig6:1226142..1226436 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 1226143..1226436 - |
| 1680791244.958273-CDS-P-littoralis_Contig6:1227284..1227533 | 1680791244.958273-CDS-P-littoralis_Contig6:1227284..1227533 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 1227285..1227533 - |
| 1680791244.9708574-CDS-P-littoralis_Contig6:1228281..1228390 | 1680791244.9708574-CDS-P-littoralis_Contig6:1228281..1228390 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 1228282..1228390 - |
| 1680791244.9821448-CDS-P-littoralis_Contig6:1229280..1229384 | 1680791244.9821448-CDS-P-littoralis_Contig6:1229280..1229384 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 1229281..1229384 - |
| 1680791244.9948876-CDS-P-littoralis_Contig6:1229888..1230001 | 1680791244.9948876-CDS-P-littoralis_Contig6:1229888..1230001 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 1229889..1230001 - |
| 1680791245.0049675-CDS-P-littoralis_Contig6:1230618..1230740 | 1680791245.0049675-CDS-P-littoralis_Contig6:1230618..1230740 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 1230619..1230740 - |
| 1680791245.014608-CDS-P-littoralis_Contig6:1231449..1231565 | 1680791245.014608-CDS-P-littoralis_Contig6:1231449..1231565 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 1231450..1231565 - |
| 1680791245.0255988-CDS-P-littoralis_Contig6:1231808..1231961 | 1680791245.0255988-CDS-P-littoralis_Contig6:1231808..1231961 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 1231809..1231961 - |
| 1680791245.0363321-CDS-P-littoralis_Contig6:1234911..1235046 | 1680791245.0363321-CDS-P-littoralis_Contig6:1234911..1235046 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 1234912..1235046 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig6.295.3 >prot_P-littoralis_Contig6.295.3 ID=prot_P-littoralis_Contig6.295.3|Name=mRNA_P-littoralis_Contig6.295.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1143bp
MAPNWQLDPRTLAFLVTKPPPDLWEDVSLVHGRCNRHWGLIRGLIEDQKK
ARKNKFSPSARLNATLFREVVTRLSLSLEAVDTKDKFNSTAGVGEVKLKV
SGKHLEGQTSARNPKHLPPAKTFVGSAPAILVAMRREGNRRDADGDVWLT
EDEIRVLAAPLSEEDLSHRADEIILGEVENFAWCSMAHLLNDAKFDCVKK
KAFDEKTTIARLEELGRRPKCVSSGCDAFATKSAGEMSDRVQLATFRRSL
FCKEHYGGGGGGGGKRKKAAGKGKGKSSSTACDPVVLDDTDLSAPLGGAA
AAAAAAAAAAAAATSGTGKIKAGWYRKLLGDALLSSELDRLEGLKGREVV
QKLHKPWRNDFAKRATNLYALTTNGKWMADKLEKALALTDGLQNGTPATA
ANPILNRSSYASFSERDGGGGGGTAASLHNGHSPLAPTRAFGAAKPGVRL
LIDNREKRGATKNSQISELTGFLNSRRVPYEMREWKVGDYGWVVQPDAGN
RPAAGEVGYEREFVVPRLLERKRVDDLAESMKDGRLGRQKREMLRAKAEG
LVSEIEIHVEGGTHERCYMDDIYRRGLTPDDLDEALDQSEEHGFKVVHHS
NFAEFGAYLADTTVALQRQFDAKTLQFEKFAIWERFVRFRKGQMPLAAAA
KLAHGGRRGRPPAAAAAGGGRGSGGSGRPPLPTGSAAAAGAGLRQRKLPE
SFGVTTKSGDADAGAGSPGVGGGGGGRGGEIMNEAVLLEEEEGRGGGRRR
GGFFSKEMEKTGRGEAPAVLSIDDDDDDGDDDDDDDDCCVVEVARPGAGS
GSDFVAAASTSAPRCGGGDALGGGGGSSGSSGSSVGGSSSGGGGSRGSNR
KAAAGAVSPFTIAAAGGYSPDSAGGARFKRGSPATSSQSHTGPATASSPG
LLTRKGVRSSTLPTTMGRRDGERAGAQSGCVGRNSSVGSKRPRPADECGG
GIGGGPSFPREYYSGTSGSGGRARASTAVATKKARSLSFGDEDEGEDDDD
GEAEHYDGGGGGGGGGGGRGKNGAGRNSGGDSIGGASTSLQRRDGHGSSS
CSGGGGGGGLGALLRRDDTSPAVPLRSAEADGGVVDLSLDSPPPPSLPQQ
QSSLQRTYDSGGGRTSGGGAGADGVVLEAFASFSDDDTDFTI* back to topmRNA from alignment at P-littoralis_Contig6:1221727..1235108- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig6.295.3 ID=mRNA_P-littoralis_Contig6.295.3|Name=mRNA_P-littoralis_Contig6.295.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=13382bp|location=Sequence derived from alignment at P-littoralis_Contig6:1221727..1235108- (Pylaiella littoralis U1_48)
TTCGGCAGAAGCGAAGGCTCTCCAAGTGCGGTGCCACACCGCCACCCAGC
AAGAGCGAGGTCATGGCGCCGAACTGGCAGCTAGATCCACGGACGTTGGC
CTTTCTTGTCACCAAGCCGCCTCCAGATTTATGGGAAGACGTCTCGCTGG
TGCACGGTCGGTGTAACAGGCATTGGGGGTTGATCCGAGGTCTAATCGTG
AGTGATGTGATTCATACCGTATTATTTCCACAGTCCCGTACACAACGCTG
TTTGACGAGGGCATTCCTAACAACAGCCGCACCCACTTGCGAGCTGGATA
TCGGTGGTAGATCAGACAGGCACCGAGAAGGAAAGTCGTAACGTTTGCAG
CGACTGTTTCCTTCTGTCCGCTTGAAGTTCTGGACCGCATTCGTAAAAAC
CAAGCCCAAAGTCCACGACAAAGAGCCCGTTGGCATGTATTGTCTTTCTA
ACAATCGAGAGATGGTGGGGGCTCTCTCCTGAAGTGCGAAGTCACTCCAT
GACGACATACTCGCGGACGTGACAGCAGTCACAAAAAGAAGGGTCGACGT
GGCTGTCGGGGATAGGCGGGCTAATCTTCGCAGCATCGAGTATCAAATGG
GGGAAAAGAGTACGAACGAACTGCTGTAGCGTTACACAGCAATACAAATC
CGAGCACATTTTTGAACTCGGTCGCACACGTGATGGTGCCCACAGAAAAA
ATAAAACATAAAATATCACGTTTTTTTAGCGATAAAAGTTGTCGTTGCAC
GGAGCCCCTGACTCCGATTTTGCCAACATATTTTGAGCAGTTCATCCACA
AACCTATACACCGAGTTTCAGCCAACTGGGTCAATTTCTGACTTATCAAC
TTGGATCTCAAGTTTTTTTTGCCAACGCTAAACTTGATATTTTGGGGATA
TTTTCGGAGGTAGACACATGATTGTTGTTGAGTCGAAAAATTCAATGTGA
TAACGACTGAAGTTTACTGTGGGGTCGTTTGAGTCGATTTCGGCAACTTT
GACAGGCCCATCGTCAGCGCTGTAGTGTTGATCCCTTATTTTGACAACTT
TTTTCGGGAAGTGTATCCACCAAGCTACACACCCTCCCAAGTTTCAGCCA
ATTCGATCCATGGCACGAGTGGGCACTCCTGGCGTGAAGTTTTGCCTCCC
GAGACCTGAAAGCGAGCTCTTTGGGGGCCATTTTTTGTAATATAACGGCT
TGCTTTCAGTTGCGATGGCGCAGCAGTTCTGCGGTTTGAAGCAAAACCAC
AGCATATGAACTACTGGACGAGGCAGGATACAGCCCTTGCGAGTCTCCTG
TTGATTTACACAAAAATACACCTTCACGTTTGACCTCCTCCTGCGACTCT
GAATTTGGTCAACTAAGCCTTGCACCGCTTTGCGGCATCAGCCTGTGGCG
GTAATCCGTTCCGAGGCTCATCAGCTCGATTTGTACCGGTGTTTGGGATG
GGGTGTACCGATTTTCTGGCGGGGGTCTGGCGGGGGTCTGGCGAGGCCAG
AGAACCCCCAACGGGATATTTTCCGAGTCCGTTCGCGCCGAAAATAATTC
CGAAAAAAAATCGGGAAGAGACGAGAAATTCACTCCGCAACGATTGCAGC
CACGACATGTCTCCATGTCATCAACACATCAACTCAGGCCTCCTCGGCAC
GTTATCTGCACAGCAGACAGATAAGTATCTTCGCCCTTTCGGCCATTTGT
ATACGAAGTAGTTATATTCAAGAGATGCAGCTGCACGTCGCACGCATTGC
GCTGGCTTCTGTATATATCGTACACAGGCGGCACGGCTCTCTCAATTTCT
CCAATAATACTGACAGTCCCGCCGGCCTCAAAGCTGTGGCCGCACACACC
CGACATAACACACCTCCCGCGCCCACCACGCCGCGATGGCTACAAAACCG
ACCACGCAAGTAGTTCTGCGCTTGCTCGCACCCACCCCGTGTTCACCTAA
GACTATCCCAAATGCCCCAAATACCCCACGGACCAAACGGCCCGTGCGCC
TCTCGTTTCTCACACAACGCAAACTTCAAACGCGTTACCTTATATGCCCG
CGGGTACAGCAGTATCCGATACCCTGAAAATCAAGGGATACACTCGCGTA
TATGCGTTCGCGGAGCCCCCCGCCCCCCGCACCAGCAGCACGGAACACAC
GCAGATAAATGCACGCAATACACAACACACAGCGATTCTACAAGCTAGGT
TGGGGTCTCAGAAAGAGTTCAGGTTGAGAATCAGAATTGAGCATCTGAAC
TGTTTTTTGTCTTTTTTGGTCCGGTTGCTTGATGCTGAGTGAGAGCTATC
ATATATATTGTGAAAAGCCCACCCACCACGCGCGAGGAGCCAGGTATATC
ATACAACACCCATTCATGTGCCAACACCAACAAAAGCATACGACAGGGTA
CCTTGGCGAGCGCTTCCTCTAACGTGTTACTATACGTCGCAACGTGATAC
CGCAGGTAATAACAGATATTCGCAGTTTTAACAGACCCGGAAGGCGTACT
AGGTAATTGCGTATATGCCGGAGTAATGCAGCAGGTTGTGTGTTGCGTGT
GTGTGACAGAACGACAGGAGGCCGGCGACAACAGCAGGCATGAAGCATGC
GCCACATACAGCAGGCCTGCGGCGTATATCGTATCACGTGTCGTCAGCAG
AAAACACACGAACACCCCGAAAACAGCTTACAGAGGTCCGCCCGGCGAGT
CCTCCCGCTACGCATACCGCAACGTCGATCATTCAGATTCGTGTGAGACA
CTGCTGTGCACTGCCGTTGTGTGGTGTGTGGGGATCTCCGCGAAATCATA
CATCTATACGGGGTACTTCCTAATATCCTGAGATCCCGAACCCCCACTGC
CCTCCGGAAATCGGGTCATACCCGTACAGCAGTACCCCAATCGGGTATTC
GAGTGGTCGGGAATTTCCGCCGGGAAACCGGATATTCGCTTAACCGGTCC
CAACCCTACTGCACAGGGGTTAAAGCCAGTACTCAAGCTTGAACGTTACA
TTCGGGGGGAAGTCATAGGTATGACCACAGTAACCCCTTTGATCACCCGT
CTCGCACAACTCGCGTCTCCTCATCTATTGGCACTATTTCCCCGCCCCCC
CTCACCTTAAGCCCTCCTCCCATTCGATGGAAAAAAAATACCAACAGGAA
GATCAAAAGAAGGCACGGAAGAACAAATTCAGCCCCAGCGCGCGGTTGAA
TGCGACCTTGTTCCGAGAAGTGGTGACTCGCCTCAGCCTCTCTCTAGAGG
CCGTGGACACAAAGGACAAGTTCAACTCTACCGCCGGGGTCGGCGAAGTG
GTACGTCGTTTTGGCGTCGTCGGTGTTCGTTGGCATTGATGGCGATTACG
GTTTGCGGTGTGTCGTCCGTGGTTGCTTTATTGTTTGTTTGTCAAATCAC
ATGATGTTCTCACGGAAAACGTTTGTGCCCTGTCATATCATATGCCAATC
AAGCCAAACAAGGTTCAAATGTCGTACATACATTTTCAGCGATTTAAGAA
CACACCTGCTGTGAATCATGTGATAACTTTTGTGACGCATCAGAAGCTCA
AGGTCAGTGGCAAGCATCTAGAGGGGCAAACGTCGGCTCGAAACCCGAAG
CACCTGCCGCCGGCCAAGACCTTTGTTGGGTCAGCGCCGGCTATCCTCGT
TGCCATGAGGTATGCTATGGATGTCCTCCTGCTGTATCTGCGGTGGTGTG
AGGTGATATGATGGCAAACATCTGTGTATGGAGCGGCATCGGCGCGGGCG
GTTTCAGGAAGTGTGTTGGTTTGACTATATCATGTGGTATGGGATGGTGT
AATGCGTGTGTGTGTGGCATTCCATGAAAAACTTCGGAATGATTTGATAT
GGCGTGGAATGGTACCGTGTTTGCTGCTGTCTTGTGCGGTGCTGTGTGGT
ATTGGTATGGTGTGATACGGGACGATATTGGATGAAATGGGATCGTATGG
TACAGTATTATGTGATGATAGTATGGTTCGGTAGTGGGTGTTGTTTTGTG
TGGCACCGAACCGGCGTGGTACTTCGCTGCTGTACCTTCGCACGCAGAGC
GCGTCCAATAATATTTTCTAAATCGAGACAGAGCTGTTCTAGGACACCAT
GTGCGCTACCTGAATTCCACTGCTGGATGTATTTCTGTAACTGGTATGCA
CTACTTTGCCCAAAGAATCGCAGCTTTAGCTATGGTGAAAAACCAACGCT
CTGTCTACCGTAATGGAAACCCAATGTGCTTTCGTCGACCGGGGTCGCTC
TGTCTTGCGGCTCACCTTTCTGCTGCACGCGCTGTTCTATATACTCATTA
TGTTTCGCTGCAACTGACTGCTGTGCTCTCTGCCGCCGACGAAATGGTGG
TTACAACGACGATGGCAGACGCGAGGGCAACCGGCGGGACGCTGACGGCG
ACGTGTGGCTCACAGAGGACGAGATCAGAGTCCTGGCTGCACCTCTCTCC
GAGGAGGACCTGAGCCACAGAGCGGACGAGATCATTCTAGGTGGGCTAAA
AATAGAAGAAGAAAAATAAAGCAAAAAACAAAAAAAAAAGTGCTTCTTCG
GCGCGGCTCGGACATGTCTGCGTACCGCACTCGAAGTTTGCTGGAAAGTA
CGGAAATATTAGATTGTGCACTGCACGTGACATGATATAACGGCTCACTT
TTGATTCCTTGCTTTGAAACATCGATGAGAGGATCCCAGCATGATGGTGT
CGACAGCGCCCACTTGTACGTCGGTCGCAGTCAACGACCGCTTGCGCCCG
AAGAGGGCGAGAAAGAACGCCGACCAGGAGAATAACAGCCGCTCAAGGAC
GAAATACCAGCTGACGCTTTGAAGAACACGCCTTGGTACGAATAGCGCCG
CTACCACAACGACGCAAATACTCTTTTGACAAAACTGCTGCTCTGTGTTA
AGTGGCAACCTACGACCTCCCCAACAGTGAAAGTTTCTGGCAGGGTATCT
GACAAAAACATGGCTCGTATCGTACTTCTTGCATTTTTGAGGGTTTTTTT
TTTTTTTTTTGGGGGAAGACGGATAACACACAACACACAAACAACAAACA
ACACTTTTTCGTTGTTATTTGTTTTTTTCTCTTGTGCGGTTTCGGAAACG
CCTTCAGGAGAGGTGGAAAACTTCGCCTGGTGCTCCATGGCTCACCTCTT
GAACGACGCGAAGTTCGACTGCGTGAAGAAGAAGGCCTTCGACGAGAAGA
CCACCATCGCGCGGCTAGAGGTATTTTGCGGGTGCACTGCGAGGTGGCAC
TACAAAGACGCAGTCGTCATATGAAGTTGTTCAACAAATGCCCAGAAGCC
CATCATCGCAAGAGCTCATCATTTATTTCACAGCAGGGGAAAACGTATGT
CCAAAAAATTAAAAATAGAAAATGTGTTCTAGGTTGGTTGGTTGTTACGG
TGGAATGTTCAGTCGTGGGTGTACTGACGTGTAGCGCCGGTGGTACTGAT
CGGGTAGTCGGCTGTTGTTCTTGTTCTTGTTCTTGCTACTGCTATTGTTG
TTGATGTTGTTGTTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGTC
GGTTTTGATGGCGAAAATTTGGTAGCGTCTGTCGTCGTTCATGTCGTTCA
CCCCTTTCGCCGCTGATCATCATGATTGTCTTGACTTGACTGACTTTTTT
GCCACGGTTTGCTGATCGATGTGCTTGCTCTCGCTACCGCGCGTTTTCTT
TTTCGTGCCTTTATATGCTCGCAGGAGCTTGGCCGACGACCGAAGTGTGT
CAGCTCAGGCTGCGACGCTTTCGCCACCAAAAGCGCGGGAGAGATGAGCG
ACAGAGTCCAGCTCGCCACCTTCCGACGGTACGATGATCGAAGTACTTTG
CAACAAGTGCCGCAGGCGACGCGTATCATATAATTTCACACTCCAAAAGG
AGGAAGAAAAATCAACCCTTGTACGTTCATACTCTGGAATAAAGTGCTGG
AATAACGTACTGGAACAACGCTATTGAATGTCGATTATTTAGTTTGGTGG
TGAGTCTTCCTGGAAAATATAGGAATCAACGGTGCGTGCTCCGGCTCGTC
TCAGGAGGGATGCCTGCCTGCATGCCTGCCTGCGTTGTCTAATCCAGTGG
TCAAACGGCCGAGGCAAGCAGCAGATGAGCACCCCCCCCCCCCCCCCCTG
GTACGTACCAGTAGCTTGACGCCCGATTTGCTGTACGTACGTACGTACGT
ACGGCGAGAAGGGTGCGAGATCCGAACGGCGCGCGTTTTTTTTTAGGGCT
CTCGAATGCTATCATAGCCATAGCTGTACCGGTATGCAACGAAGCCGAGC
GAGGTACCGCCTCCCCTTTGCTTTGCTTCAAGAGTTAAAGGATCGTCCCA
AGCGGGAGCGGGGGAGCGCGTTGGTAATGTGTGATATGTTCATGCTGCTA
GACCCGCGTGATACATAGTATTCGAAAGCGAGAATACAGAATACAGAGTT
CTCCCCCGAGTATGCATACAGCACAGCAGAAGTGCGGCATAATCATCATA
CTTCGAAGTATATGTTCCGAAAGTTTTGCTAACTTCGGGGGTAAAGCTTA
CAGCTTTCACGCGCACACGGCCGCACACGCACGCACACACACAAACACGC
GAACGCACACGAATGCACCAGATGTTTGTTCTGTTTATTCGGCTCCCCCA
CCGCCAATTGGCATGCTGCCGTTTAGCCTCGTAGCTTAGTCCGTATACCA
TCTGACGCTCTCCGGCAGGAGCTTGTTCTGCAAGGAGCACTACGGAGGCG
GTGGCGGTGGAGGAGGAAAGCGGAAGAAGGCCGCTGGGAAGGGGAAAGGA
AAAAGCAGCAGCACGGCGTGCGATCCTGTGAGAGCGCTGCTGTCTTGTCT
GTCTTGGGTTTACTTTCGTGTCTTGGTTGTTCTCGTCCTGTCTGGTCTTG
TCTGTCGTATCTTGATTTCGACTGTCGTATCTTGGCTGTGTTGTATCGTG
ACTGCTGTGTCGTGTATTGTCTGTCATATGTTATTTATCTCATGTTTTTC
CTACGCTGTCTGCCTTGGATTGTCTTGTCTCATCTTGCCTGCCTCGTCAT
GTATAGCCTTGCATCATCTCGTGTGTCTTTGTCTTGTCTGTCTGCCTTGT
CTTGTCTTGCCTCGTTCTGTTTGCCTTGTCTTTTCTTGACTACGGTATAG
TATGAGTGTCTCGTCTTGTCTTTCATTTGTCCTGTCTCGTCTTGCCTCGC
CTGTCCTGTCTTTTCTTTCTCATCTCGTCTTGTTATCACCTCGCCTGTTT
TCACCTTGTCCTTGTCTCGCCTGTCTTTTGCATAATTTCTTGACTCGTCT
ACTCTCTTCGTCGTATTTTTGTCTTCTCCGACTCGCCCCTCCCGGAAGCT
GCGTTAGCTTTGCGTCCCATGATGCAAGAAGACCTTGCTAGAACAATGCC
TGCCCGTACGATCCATCACATGCCTTTCACTGCTGTACGATCTCGCGACT
GTCCCGAAGATAGCCACATCATACCGTACTGCAACAGCACCGCACCATCG
ATCCTGGCCCGTAATTGACCCCCCCCCTGTCCTTTTGCCTACGGTGTACG
CCGCAAACCCCTCTCCTCCACGAAGGTGGTTCTCGATGACACGGACCTGT
CGGCACCGCTCGGAGGCGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGCCACCAGCGGCACCGGAAAGATAAAGGCTGGCTGGTACCG
CAAACTCTTGGGGGATGCCTTGCTCTCGTCGGAGCTCGACCGGCTGGAGG
GGCTGAAGGGACGGGAGGTGGTTCAGAAGCTGCACAAGCCGTGGCGCAAT
GACTTTGCTAAGAGAGCCACAAACGTGAGAAAGAGGTGGGGGAGCTGATA
AGATAAAAGTGGCTACGCCTCGTAACTGCTGTGTGTGGGATTGTGCTGAG
AAATGGACAAAACTTGTTTCGGATTATGTTGGGGCTCGTCTTGTATTGCT
CCTGTAAACTCAGGAAAGCCCTCGTTGTGTTGCCTTCACGGTGCGCATGA
ACAGTTGTTCCGACTGCTGTACAGCAGAATACGGCACGCATTTTTTATTT
ATTTGTTGCCTTCTCTGAACTGCTCTGAGTTTCTCCTTCGTCATTTGTTG
ATTTGACCTCTTCCATCTTGAGCCGTTTTTATTTTTTTACCCTCACTGCT
TTTCATGTTTTGTCATTTTGTTGTTGAGGTTTTATTTTATTTGTTGCCAT
TTTTATTTGTCGATTCTCACGCTTTTTCCAATTGTTGTTGTTTCTCCTGT
TTCCCTCTCGCCATCCATTTGTTGTTTTATCACTTTACTTTTCCCGTTTT
TGCCACTCGGTTGTTGATTTTCCCCCCCTTTGTTTTCCTTTTACCCCCAT
TCTGTTGATTCTCACTATTTCGATTTTTTTCTTTTTTCTTTTTTCTCGCC
ATTTATTTGTCGATTTTCACCCTCGATTTGCCGAAACATCCGGTCCTGCA
ACCCTCGTTAGGTAGACACCGGAACGCCCCCACCCACCAGCCAACCAACC
AACCAACCAACCAACCATATGACCAGCATTTCGAACAACAAAACGCACAA
GACCGCACGGAATCGACGCTTGTGCACAACGGTACTTGCTACGATCGGCA
CTACACGACTCCTTACCCGAACGAAACCCAACCCGTGCTTGATTGACCCC
CCCCCTCTCTCTCTCTCTCCAGCTGTACGCTCTCACGACCAACGGCAAAT
GGATGGCAGACAAGCTGGAGAAGGCCTTGGCACTGACGGATGGGCTGCAA
AACGGGACGCCAGCCACGGCCGCTAACCCCATCCTCAACCGAAGCTCGTA
CGCGAGCTTCTCGGAGAGGGACGGCGGGGGCGGCGGCGGAACGGCGGCGT
CCTTGCACAACGGACACTCGCCGCTGGCGCCGACCAGGGCATTCGGCGCC
GCTAAGCCCGGGGTTCGGCTGCTGATCGACAACAGGGAGAAGCGGGGGGC
CACGAAAAACAGTCAGGTGGTTTTTTGTTGTTGTTGTTGTCGTCGTCGTC
GTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTTGTTGTTGTTGTTGTTGT
TGTTGTTGTTGGCGCAGTAATGATATGAATGGGTGCCTGCTGCCTGCCGC
GTGTCGTGTGTTGTTGTGTCCGGGGGGGGGGGGGGGGGGGAGAAGAGGAG
GCCGGGGGTTTCGGGTTGTTTTTTATTGCAAGCACGGGGTGTTGCTCCGT
CGCGCACCGTCGAAGAAGGGCACGTTTTTGGTGTTCGTCTCGCTGAACCT
TGCGTCTTTTTGCCCCTTTGTTTGATCCGCCGGCCGGCCAGCGGTACGCA
TGAAAGCAGCGGCCGACGCAATTTTTTTACTTCAACACCTCCCTTTCCGT
ACCTGCCGCGATCGCAAGCAAGACAAGAAACATCCACACACGAACACGGA
CACATACGCGCGCACAGATTTCCGAGCTGACGGGCTTCCTCAACAGCCGA
CGCGTGCCGTACGAGATGCGGGAATGGAAGGTGGGAGACTACGGCTGGGT
GGTGCAGCCTGACGCAGGAAACCGTCCTGCTGCTGGGGAGGTATGTATGT
GTGTGCATGTACATCCTATGTATGTATGTGCGGAACTGCCACTTGTCAGT
CCGACTCTTCTGTGACCGTCGTACATGAGTATCTTAGGTCTGTCCACCCA
CGCCGTGTATACAGTCGCAGCAAAGTTTGCCAGCAAGAGAGAGGGAGGGA
GGAAGGGAGGGAGTTGAGTGTGTGTGGAGTCATCCCATATGTTCTGGGCA
CCAGGCTGCACGTTTCGTTAGATGCTCGACGCGTCAGCCGGGGTCGCGTA
GAAGTACCTGAGATCGCAAAGCTTTTTCCTTTTTTTTCGATGTTCCTCCG
AAACGTGAGAGCGTTAAATAAACTTCCTAATTTGTGCTACATGTCATAAA
CGCTTAACATAAATATTCAGTTTTTCGTCCAACATGATGTACCAAAAGAG
AAAGAATGGCGCAGCCAGTTATTTTGAGTGTGAGTCGCGGGAGAGAGATG
TGTCGCATTTGTTTTTGGAACCCTCAACCCCGCTCTTTTGGGTGTATTCC
CTGTACACAACCGTATTGCTTCATGTATGCGTGCATGCATTTTCAGGTGG
GGTACGAGCGGGAGTTCGTGGTGCCTCGGCTGCTGGAGAGGAAACGCGTC
GACGACCTTGCCGAGTCGATGAAGGATGGGTGAGAAATTTCTTCAAGGTG
TAGTCAGACCAGGGGGTGGTGGCAGTGATGGTGGTAAGTGGGAGGGAGGG
GAGGGGGAGGAAGGGTTCGACAATCTGGATGAGGTCATGAAGGACGGGTA
AGATCGTTAGGGTCGACGAAGAGCGAGCGGGACACGCGATCGTGGTGATG
GGTACTAGTATGTACACTTAAATACTTCACCCGAACCTGAACCTCGAGGG
ATCTTTTGAACCGAGTGGCCGTTCGTTCGCCGCTGTCGCTGTCGACACGT
CTGTTGCTCGCTGTCTATTTCTCCGCACGATTGAATGCCTATGCAGGCGT
CTGGGCCGTCAGAAGAGAGAAATGCTGCGCGCGAAAGCCGAAGGCTTGGT
GTCCGAGATCGAGATACACGTGGAGGGGGGCACGCACGAGAGGTGCTACA
TGGACGATATCTATCGGCGAGGTTTAACCCCCGATGATCTCGATGAAGCA
CTGGACCAGTCAGAAGAGCATGGATTTAAGGTGCGGCGTTTTCGTCGGCG
TTGCTGTGTTGATGGGGGGGGTCGGGGTTGGGATGATGGTCGAGCTGTCG
TCGTTGTTTGTATTGTTGTTACTGGAGCTGCTGCTGTTTGTGGTAGTGGG
ATCGTGGCGCAGCTGTGGTTGTTGCCACAGGTATTCTTGTCGCTGGGGTT
GTTGTCGTTGGCCTTTCTCGGCGTGAGCTGGACTGTCTCGCGAGAGTCAA
GAATATCAAATGATGGCTATTTGTTTAGCAGTATTGGTAAATGTTGCCCA
CATTTCCGTTCACGTCATTTTGAACGTTATATTTTGACCATACACCGCTG
CTCGATTGACACTCAGCGCCAGGCCTCCGACAACAACACACACATACACA
CACACACACCTCCTGCTCTCTCCCCGCCCTCCCCTTTTTGTTTGGGCGGC
CAACTTGTGACACCGGCACATGGATATGCGCTCATGCATACATGCGCATA
TACTGATCCACGCCTAGGTCGTGCACCACAGCAATTTCGCGGAGTTCGGC
GCCTACCTCGCGGACACCACCGTGGCCCTCCAGAGGCAATTTGACGCGAA
AACGCTCCAGTTCGAGAAGTTTGCCATCTGGGAAAGATTCGTTCGCTTCC
GCAAGGGCCAGATGCCGCTCGCCGCCGCAGCTAAGCTCGCGCACGGAGGG
AGGCGGGGCCGCCCTCCGGCAGCAGCAGCAGCGGGAGGCGGGAGAGGGAG
TGGGGGCAGCGGCAGACCCCCTCTTCCGACAGGGTCTGCTGCTGCTGCAG
GGGCGGGATTGCGTCAGCGAAAACTTCCTGAGAGTTTCGGAGTAACGACG
AAGTCCGGAGATGCTGATGCTGGTGCTGGTAGCCCTGGTGTGGGCGGGGG
CGGTGGGGGCCGTGGTGGTGAGATCATGAACGAGGCCGTGCTGCTGGAGG
AAGAGGAAGGTCGAGGTGGTGGTCGTAGACGTGGAGGATTTTTTTCCAAG
GAGATGGAGAAGACTGGGAGGGGGGAGGCACCTGCTGTCCTTAGCATCGA
TGATGATGATGATGATGGTGATGATGATGACGACGATGATGACTGCTGCG
TCGTAGAAGTTGCTCGTCCGGGTGCTGGTAGCGGCTCCGACTTTGTTGCT
GCGGCAAGTACGTCGGCCCCACGCTGCGGTGGTGGCGACGCTCTCGGCGG
CGGCGGCGGCAGCAGCGGCAGCAGCGGCAGTAGTGTCGGTGGTAGCAGCA
GCGGCGGCGGTGGTAGCCGGGGTAGTAATAGGAAAGCGGCGGCGGGGGCG
GTCTCACCATTCACCATCGCTGCTGCCGGCGGATACTCGCCCGATTCTGC
TGGTGGTGCAAGATTCAAAAGAGGGTCACCGGCAACGTCGTCGCAGTCGC
ATACAGGACCGGCGACGGCTTCATCCCCTGGGCTGCTGACACGCAAGGGA
GTTCGTTCTTCCACCCTGCCGACGACAATGGGCAGGAGGGACGGGGAAAG
GGCGGGTGCTCAGAGCGGTTGCGTGGGTCGGAACTCGAGCGTAGGCAGCA
AACGGCCCCGGCCGGCGGACGAATGCGGGGGCGGAATAGGCGGCGGGCCC
TCTTTTCCACGGGAATATTACAGCGGCACCAGCGGCAGCGGGGGGCGCGC
GAGGGCGTCGACAGCGGTAGCCACCAAGAAAGCGCGCTCGCTCTCCTTCG
GCGACGAAGACGAAGGCGAAGATGATGATGATGGTGAGGCAGAGCATTAC
GACGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGCCGTGGCAAAAATGG
AGCAGGCCGAAACAGCGGTGGCGACAGCATTGGTGGAGCCTCGACAAGTT
TGCAACGGCGAGATGGCCACGGGTCCAGTAGCTGCAGTGGCGGCGGCGGC
GGTGGAGGATTGGGAGCGTTGCTTCGGCGCGACGATACCTCACCAGCGGT
GCCGTTGCGCTCGGCGGAGGCCGATGGCGGCGTCGTAGACCTCAGCCTGG
ACAGTCCACCGCCGCCGTCGCTTCCGCAACAGCAGAGCTCACTGCAAAGG
ACGTACGACTCGGGCGGCGGTAGAACAAGCGGGGGAGGAGCAGGAGCTGA
CGGCGTTGTCTTGGAAGCGTTTGCTTCTTTCTCGGACGATGATACTGATT
TCACCATCTAAGTCCTGTGTGCATTATTCATGTTTATCATAGTCTGAGAG
GAGGTGCGTTTTGTCCACGAGATATACGTGTTCAACATGGCGAGAGGTTG
TTTTATTCCAGGGGACTAACTGCGTCCTTCGAAGTACTATTCGCGTGTTT
TTTTTTGTGTGTTTCGTGTTTGCTTCTCTCACCAGGGTGATACGCGTGTA
CACAGCAGTTGAGCAACTCGTGTGCGTGCGCTCAACATGCCTCGAGTTGA
AAGGACAAGAGTTTCAGCCTCGGCAATGAAGGGAAGTTCTTCATGAAGTG
CAGCAGTGGTAGTCAGAAGTTGTTTGGTATGTCGCTTTCTCAAGCGCTTG
AAGGTAAAATATGTTACCGAAAATATGGGCGACCTTCCTCCTGTGTGTGA
CCCCGGCTGAAGCACCCGCAACAACCGGTATGTACAACTAGGCGTTGCCG
AAACTGATCCCGGTACAGAGAGAGCGTCTCTGGCCGATGCGACCGTTTAT
CGTGTGAGGGATACAGGGTAGCACTTTGTTATAGATGAGGATGTACGCGT
TGTGTGGGTATGTACACGGAGGCCCGGTGACT back to topCoding sequence (CDS) from alignment at P-littoralis_Contig6:1221727..1235108- >mRNA_P-littoralis_Contig6.295.3 ID=mRNA_P-littoralis_Contig6.295.3|Name=mRNA_P-littoralis_Contig6.295.3|organism=Pylaiella littoralis U1_48|type=CDS|length=3429bp|location=Sequence derived from alignment at P-littoralis_Contig6:1221727..1235108- (Pylaiella littoralis U1_48)
ATGGCGCCGAACTGGCAGCTAGATCCACGGACGTTGGCCTTTCTTGTCAC
CAAGCCGCCTCCAGATTTATGGGAAGACGTCTCGCTGGTGCACGGTCGGT
GTAACAGGCATTGGGGGTTGATCCGAGGTCTAATCGAAGATCAAAAGAAG
GCACGGAAGAACAAATTCAGCCCCAGCGCGCGGTTGAATGCGACCTTGTT
CCGAGAAGTGGTGACTCGCCTCAGCCTCTCTCTAGAGGCCGTGGACACAA
AGGACAAGTTCAACTCTACCGCCGGGGTCGGCGAAGTGAAGCTCAAGGTC
AGTGGCAAGCATCTAGAGGGGCAAACGTCGGCTCGAAACCCGAAGCACCT
GCCGCCGGCCAAGACCTTTGTTGGGTCAGCGCCGGCTATCCTCGTTGCCA
TGAGACGCGAGGGCAACCGGCGGGACGCTGACGGCGACGTGTGGCTCACA
GAGGACGAGATCAGAGTCCTGGCTGCACCTCTCTCCGAGGAGGACCTGAG
CCACAGAGCGGACGAGATCATTCTAGGAGAGGTGGAAAACTTCGCCTGGT
GCTCCATGGCTCACCTCTTGAACGACGCGAAGTTCGACTGCGTGAAGAAG
AAGGCCTTCGACGAGAAGACCACCATCGCGCGGCTAGAGGAGCTTGGCCG
ACGACCGAAGTGTGTCAGCTCAGGCTGCGACGCTTTCGCCACCAAAAGCG
CGGGAGAGATGAGCGACAGAGTCCAGCTCGCCACCTTCCGACGGAGCTTG
TTCTGCAAGGAGCACTACGGAGGCGGTGGCGGTGGAGGAGGAAAGCGGAA
GAAGGCCGCTGGGAAGGGGAAAGGAAAAAGCAGCAGCACGGCGTGCGATC
CTGTGGTTCTCGATGACACGGACCTGTCGGCACCGCTCGGAGGCGCTGCT
GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCACCAGCGGCAC
CGGAAAGATAAAGGCTGGCTGGTACCGCAAACTCTTGGGGGATGCCTTGC
TCTCGTCGGAGCTCGACCGGCTGGAGGGGCTGAAGGGACGGGAGGTGGTT
CAGAAGCTGCACAAGCCGTGGCGCAATGACTTTGCTAAGAGAGCCACAAA
CCTGTACGCTCTCACGACCAACGGCAAATGGATGGCAGACAAGCTGGAGA
AGGCCTTGGCACTGACGGATGGGCTGCAAAACGGGACGCCAGCCACGGCC
GCTAACCCCATCCTCAACCGAAGCTCGTACGCGAGCTTCTCGGAGAGGGA
CGGCGGGGGCGGCGGCGGAACGGCGGCGTCCTTGCACAACGGACACTCGC
CGCTGGCGCCGACCAGGGCATTCGGCGCCGCTAAGCCCGGGGTTCGGCTG
CTGATCGACAACAGGGAGAAGCGGGGGGCCACGAAAAACAGTCAGATTTC
CGAGCTGACGGGCTTCCTCAACAGCCGACGCGTGCCGTACGAGATGCGGG
AATGGAAGGTGGGAGACTACGGCTGGGTGGTGCAGCCTGACGCAGGAAAC
CGTCCTGCTGCTGGGGAGGTGGGGTACGAGCGGGAGTTCGTGGTGCCTCG
GCTGCTGGAGAGGAAACGCGTCGACGACCTTGCCGAGTCGATGAAGGATG
GGCGTCTGGGCCGTCAGAAGAGAGAAATGCTGCGCGCGAAAGCCGAAGGC
TTGGTGTCCGAGATCGAGATACACGTGGAGGGGGGCACGCACGAGAGGTG
CTACATGGACGATATCTATCGGCGAGGTTTAACCCCCGATGATCTCGATG
AAGCACTGGACCAGTCAGAAGAGCATGGATTTAAGGTCGTGCACCACAGC
AATTTCGCGGAGTTCGGCGCCTACCTCGCGGACACCACCGTGGCCCTCCA
GAGGCAATTTGACGCGAAAACGCTCCAGTTCGAGAAGTTTGCCATCTGGG
AAAGATTCGTTCGCTTCCGCAAGGGCCAGATGCCGCTCGCCGCCGCAGCT
AAGCTCGCGCACGGAGGGAGGCGGGGCCGCCCTCCGGCAGCAGCAGCAGC
GGGAGGCGGGAGAGGGAGTGGGGGCAGCGGCAGACCCCCTCTTCCGACAG
GGTCTGCTGCTGCTGCAGGGGCGGGATTGCGTCAGCGAAAACTTCCTGAG
AGTTTCGGAGTAACGACGAAGTCCGGAGATGCTGATGCTGGTGCTGGTAG
CCCTGGTGTGGGCGGGGGCGGTGGGGGCCGTGGTGGTGAGATCATGAACG
AGGCCGTGCTGCTGGAGGAAGAGGAAGGTCGAGGTGGTGGTCGTAGACGT
GGAGGATTTTTTTCCAAGGAGATGGAGAAGACTGGGAGGGGGGAGGCACC
TGCTGTCCTTAGCATCGATGATGATGATGATGATGGTGATGATGATGACG
ACGATGATGACTGCTGCGTCGTAGAAGTTGCTCGTCCGGGTGCTGGTAGC
GGCTCCGACTTTGTTGCTGCGGCAAGTACGTCGGCCCCACGCTGCGGTGG
TGGCGACGCTCTCGGCGGCGGCGGCGGCAGCAGCGGCAGCAGCGGCAGTA
GTGTCGGTGGTAGCAGCAGCGGCGGCGGTGGTAGCCGGGGTAGTAATAGG
AAAGCGGCGGCGGGGGCGGTCTCACCATTCACCATCGCTGCTGCCGGCGG
ATACTCGCCCGATTCTGCTGGTGGTGCAAGATTCAAAAGAGGGTCACCGG
CAACGTCGTCGCAGTCGCATACAGGACCGGCGACGGCTTCATCCCCTGGG
CTGCTGACACGCAAGGGAGTTCGTTCTTCCACCCTGCCGACGACAATGGG
CAGGAGGGACGGGGAAAGGGCGGGTGCTCAGAGCGGTTGCGTGGGTCGGA
ACTCGAGCGTAGGCAGCAAACGGCCCCGGCCGGCGGACGAATGCGGGGGC
GGAATAGGCGGCGGGCCCTCTTTTCCACGGGAATATTACAGCGGCACCAG
CGGCAGCGGGGGGCGCGCGAGGGCGTCGACAGCGGTAGCCACCAAGAAAG
CGCGCTCGCTCTCCTTCGGCGACGAAGACGAAGGCGAAGATGATGATGAT
GGTGAGGCAGAGCATTACGACGGCGGCGGCGGCGGCGGCGGCGGCGGCGG
TGGCCGTGGCAAAAATGGAGCAGGCCGAAACAGCGGTGGCGACAGCATTG
GTGGAGCCTCGACAAGTTTGCAACGGCGAGATGGCCACGGGTCCAGTAGC
TGCAGTGGCGGCGGCGGCGGTGGAGGATTGGGAGCGTTGCTTCGGCGCGA
CGATACCTCACCAGCGGTGCCGTTGCGCTCGGCGGAGGCCGATGGCGGCG
TCGTAGACCTCAGCCTGGACAGTCCACCGCCGCCGTCGCTTCCGCAACAG
CAGAGCTCACTGCAAAGGACGTACGACTCGGGCGGCGGTAGAACAAGCGG
GGGAGGAGCAGGAGCTGACGGCGTTGTCTTGGAAGCGTTTGCTTCTTTCT
CGGACGATGATACTGATTTCACCATCTAA back to top
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