prot_P-littoralis_Contig1157.11.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1157.11.1
Unique Nameprot_P-littoralis_Contig1157.11.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length86
Homology
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BLAST of mRNA_P-littoralis_Contig1157.11.1 vs. uniprot
Match: A0A318QXT7_9PROT (HNHc domain-containing protein n=2 Tax=Komagataeibacter oboediens TaxID=65958 RepID=A0A318QXT7_9PROT)

HSP 1 Score: 52.0 bits (123), Expect = 9.710e-7
Identity = 28/76 (36.84%), Postives = 40/76 (52.63%), Query Frame = 0 
Query:    9 NGYGRIRIMGKQRSAHVMSCEIATKRAIEPGEVTRHLCGKNLCIAPHYLQVGDPSANGLDCLKHGSKRVNWTRKRL 84
            NGYG +R+ GK  SAH  + E+     ++  +V  HLC    C+ P +L +G  S N  DC   G +   + RKRL
Sbjct:   13 NGYGNVRLNGKNVSAHRRAYELFCGPVLDGMDVC-HLCDNRWCVNPDHLFLGTRSENMADCAAKG-RATGFYRKRL 86
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1157.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A318QXT7_9PROT9.710e-736.84HNHc domain-containing protein n=2 Tax=Komagataeib... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR044925His-Me finger superfamilySUPERFAMILY54060His-Me finger endonucleasescoord: 7..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1157contigP-littoralis_Contig1157:40279..40536 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1157.11.1mRNA_P-littoralis_Contig1157.11.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1157 40279..40536 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1157.11.1 ID=prot_P-littoralis_Contig1157.11.1|Name=mRNA_P-littoralis_Contig1157.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=86bp
IFTGYIHTNGYGRIRIMGKQRSAHVMSCEIATKRAIEPGEVTRHLCGKNL
CIAPHYLQVGDPSANGLDCLKHGSKRVNWTRKRLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR044925His-Me_finger_sf